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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT4G02880 AT4G02880 |
| fragaria_vesca | FvH4_2g23870 FvH4_2g23870 FvH4_2g23870 FvH4_2g23870 |
| malus_domestica | MD03G1268400.v1.1 MD11G1289200.v1.1 |
| prunus_persica | Prupe.8G244100_v2.0.a1 Prupe.8G244100_v2.0.a1 |
| pyrus_communis | pycom03g21430 pycom11g25660 |
| rosa_chinensis | RchiOBHm_Chr6g0291481 |
| rosa_laevigata | RLG00000012112 |
| rosa_multiflora | Rmu_sc0003296.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00176020 |
| rosa_rugosa | Rorug06G0219800 Rorug06G0219900 |
| rosa_samantha | Rh6AG332000 Rh6BG338900 Rh6CG345100 Rh6DG332300 |
| rosa_wichuraiana | Rw6G028840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 107 |
| AccB1I | GGYRCC | 1 cut(s) | 540 |
| AciI | CCGC | 3 cut(s) | 165, 1385, 1405 |
| AclWI | GGATC | 4 cut(s) | 393, 770, 783, 1576 |
| AcoI | YGGCCR | 1 cut(s) | 1275 |
| AcsI | RAATTY | 4 cut(s) | 320, 440, 1393, 1694 |
| AcuI | CTGAAG | 5 cut(s) | 219, 596, 1167, 1548, 1656 |
| AcyI | GRCGYC | 1 cut(s) | 1589 |
| AfaI | GTAC | 3 cut(s) | 648, 798, 1242 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 275, 817, 1404, 1653, 1654 |
| AflIII | ACRYGT | 2 cut(s) | 793, 1071 |
| AgsI | TTSAA | 9 cut(s) | 31, 176, 293, 899, 911, 989, 1163, 1238, 1579 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 150 |
| AjnI | CCWGG | 4 cut(s) | 45, 154, 507, 543 |
| AluBI | AGCT | 9 cut(s) | 24, 107, 610, 998, 1159, 1250, 1319, 1559, 1736 |
| AluI | AGCT | 9 cut(s) | 24, 107, 610, 998, 1159, 1250, 1319, 1559, 1736 |
| Alw26I | GTCTC | 1 cut(s) | 1688 |
| AlwI | GGATC | 4 cut(s) | 393, 770, 783, 1576 |
| AoxI | GGCC | 2 cut(s) | 861, 1275 |
| ApeKI | GCWGC | 5 cut(s) | 104, 392, 452, 1022, 1382 |
| ApoI | RAATTY | 4 cut(s) | 320, 440, 1393, 1694 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 225, 704 |
| AspS9I | GGNCC | 1 cut(s) | 1420 |
| AsuHPI | GGTGA | 8 cut(s) | 221, 646, 764, 955, 1060, 1124, 1669, 1680 |
| AvaII | GGWCC | 1 cut(s) | 1420 |
| BaeGI | GKGCMC | 1 cut(s) | 543 |
| BamHI | GGATCC | 1 cut(s) | 775 |
| BanI | GGYRCC | 1 cut(s) | 540 |
| BbsI | GAAGAC | 1 cut(s) | 1373 |
| BbvI | GCAGC | 5 cut(s) | 116, 404, 439, 1034, 1394 |
| BccI | CCATC | 4 cut(s) | 686, 1346, 1411, 1742 |
| BceAI | ACGGC | 1 cut(s) | 440 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1354, 1388 |
| BciT130I | CCWGG | 4 cut(s) | 47, 156, 509, 545 |
| BciVI | GTATCC | 1 cut(s) | 272 |
| BclI | TGATCA | 2 cut(s) | 310, 636 |
| BcoDI | GTCTC | 1 cut(s) | 1688 |
| BfaI | CTAG | 5 cut(s) | 731, 1139, 1247, 1536, 1649 |
| BfuI | GTATCC | 1 cut(s) | 272 |
| BglII | AGATCT | 1 cut(s) | 1771 |
| BisI | GCNGC | 5 cut(s) | 105, 393, 453, 1023, 1383 |
| BlsI | GCNGC | 5 cut(s) | 106, 394, 454, 1024, 1384 |
| Bme1390I | CCNGG | 4 cut(s) | 47, 156, 509, 545 |
| Bme18I | GGWCC | 1 cut(s) | 1420 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 1 cut(s) | 1420 |
| BmiI | GGNNCC | 2 cut(s) | 542, 777 |
| BmrFI | CCNGG | 4 cut(s) | 47, 156, 509, 545 |
| BmsI | GCATC | 5 cut(s) | 286, 904, 1081, 1212, 1560 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1425 |
| BpiI | GAAGAC | 1 cut(s) | 1373 |
| BpmI | CTGGAG | 1 cut(s) | 1272 |
| BsaBI | GATNNNNATC | 1 cut(s) | 525 |
| BsaHI | GRCGYC | 1 cut(s) | 1589 |
| BsaI | GGTCTC | 1 cut(s) | 1688 |
| BsaJI | CCNNGG | 6 cut(s) | 45, 354, 816, 948, 1278, 1423 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 275, 817, 1404, 1653, 1654 |
| Bse118I | RCCGGY | 1 cut(s) | 734 |
| Bse1I | ACTGG | 4 cut(s) | 190, 480, 585, 1522 |
| Bse3DI | GCAATG | 1 cut(s) | 494 |
| Bse8I | GATNNNNATC | 1 cut(s) | 525 |
| BseBI | CCWGG | 4 cut(s) | 47, 156, 509, 545 |
| BseDI | CCNNGG | 6 cut(s) | 45, 354, 816, 948, 1278, 1423 |
| BseGI | GGATG | 6 cut(s) | 121, 1096, 1288, 1480, 1571, 1762 |
| BseJI | GATNNNNATC | 1 cut(s) | 525 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 275, 817, 1404, 1653, 1654 |
| BseMI | GCAATG | 1 cut(s) | 494 |
| BseMII | CTCAG | 4 cut(s) | 392, 531, 1189, 1623 |
| BseNI | ACTGG | 4 cut(s) | 190, 480, 585, 1522 |
| BseRI | GAGGAG | 2 cut(s) | 505, 1373 |
| BseSI | GKGCMC | 1 cut(s) | 543 |
| BseXI | GCAGC | 5 cut(s) | 116, 404, 439, 1034, 1394 |
| BsgI | GTGCAG | 1 cut(s) | 1293 |
| BshFI | GGCC | 2 cut(s) | 863, 1277 |
| BshNI | GGYRCC | 1 cut(s) | 540 |
| BsiSI | CCGG | 2 cut(s) | 269, 735 |
| BslFI | GGGAC | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 275, 817, 1404, 1653, 1654 |
| BsmAI | GTCTC | 1 cut(s) | 1688 |
| BsmFI | GGGAC | 1 cut(s) | 147 |
| BsmI | GAATGC | 1 cut(s) | 16 |
| BsnI | GGCC | 2 cut(s) | 863, 1277 |
| Bso31I | GGTCTC | 1 cut(s) | 1688 |
| Bsp1286I | GDGCHC | 1 cut(s) | 543 |
| Bsp143I | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| Bsp19I | CCATGG | 1 cut(s) | 948 |
| BspACI | CCGC | 3 cut(s) | 165, 1385, 1405 |
| BspANI | GGCC | 2 cut(s) | 863, 1277 |
| BspCNI | CTCAG | 4 cut(s) | 391, 530, 1188, 1624 |
| BspHI | TCATGA | 2 cut(s) | 460, 667 |
| BspLI | GGNNCC | 2 cut(s) | 542, 777 |
| BspPI | GGATC | 4 cut(s) | 393, 770, 783, 1576 |
| BspT107I | GGYRCC | 1 cut(s) | 540 |
| BspTNI | GGTCTC | 1 cut(s) | 1688 |
| BsrDI | GCAATG | 1 cut(s) | 494 |
| BsrFI | RCCGGY | 1 cut(s) | 734 |
| BsrI | ACTGG | 4 cut(s) | 190, 480, 585, 1522 |
| BssAI | RCCGGY | 1 cut(s) | 734 |
| BssECI | CCNNGG | 6 cut(s) | 45, 354, 816, 948, 1278, 1423 |
| BssMI | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| BssNI | GRCGYC | 1 cut(s) | 1589 |
| BssT1I | CCWWGG | 2 cut(s) | 816, 948 |
| Bst2UI | CCWGG | 4 cut(s) | 47, 156, 509, 545 |
| Bst4CI | ACNGT | 6 cut(s) | 152, 355, 674, 808, 1424, 1682 |
| Bst6I | CTCTTC | 2 cut(s) | 894, 984 |
| BstACI | GRCGYC | 1 cut(s) | 1589 |
| BstC8I | GCNNGC | 2 cut(s) | 736, 1107 |
| BstDEI | CTNAG | 7 cut(s) | 168, 378, 517, 1175, 1517, 1555, 1632 |
| BstDSI | CCRYGG | 3 cut(s) | 354, 948, 1423 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 815 |
| BstF5I | GGATG | 6 cut(s) | 121, 1096, 1288, 1480, 1571, 1762 |
| BstKTI | GATC | 9 cut(s) | 313, 401, 433, 529, 639, 778, 1006, 1571, 1774 |
| BstMAI | GTCTC | 1 cut(s) | 1688 |
| BstMBI | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1091, 1139, 1256, 1316 |
| BstNI | CCWGG | 4 cut(s) | 47, 156, 509, 545 |
| BstNSI | RCATGY | 6 cut(s) | 89, 797, 1075, 1085, 1105, 1109 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1425 |
| BstSCI | CCNGG | 4 cut(s) | 45, 154, 507, 543 |
| BstSLI | GKGCMC | 1 cut(s) | 543 |
| BstV1I | GCAGC | 5 cut(s) | 116, 404, 439, 1034, 1394 |
| BstV2I | GAAGAC | 1 cut(s) | 1373 |
| BstX2I | RGATCY | 3 cut(s) | 398, 775, 1771 |
| BstYI | RGATCY | 3 cut(s) | 398, 775, 1771 |
| BsuI | GTATCC | 1 cut(s) | 272 |
| BsuRI | GGCC | 2 cut(s) | 863, 1277 |
| BtgI | CCRYGG | 3 cut(s) | 354, 948, 1423 |
| BtsCI | GGATG | 6 cut(s) | 121, 1096, 1288, 1480, 1571, 1762 |
| BtsI | GCAGTG | 1 cut(s) | 1370 |
| BtsIMutI | CAGTG | 3 cut(s) | 195, 473, 1370 |
| Cac8I | GCNNGC | 2 cut(s) | 736, 1107 |
| CciI | TCATGA | 2 cut(s) | 460, 667 |
| Cfr10I | RCCGGY | 1 cut(s) | 734 |
| Cfr13I | GGNCC | 1 cut(s) | 1420 |
| CseI | GACGC | 2 cut(s) | 110, 1578 |
| Csp6I | GTAC | 3 cut(s) | 647, 797, 1241 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1704, 1739 |
| CviQI | GTAC | 3 cut(s) | 647, 797, 1241 |
| DdeI | CTNAG | 7 cut(s) | 168, 378, 517, 1175, 1517, 1555, 1632 |
| DpnI | GATC | 9 cut(s) | 312, 400, 432, 528, 638, 777, 1005, 1570, 1773 |
| DpnII | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 107 |
| DriI | GACNNNNNGTC | 1 cut(s) | 150 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 107 |
| EaeI | YGGCCR | 1 cut(s) | 1275 |
| Eam1104I | CTCTTC | 2 cut(s) | 894, 984 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 2 cut(s) | 894, 984 |
| Eco130I | CCWWGG | 2 cut(s) | 816, 948 |
| Eco31I | GGTCTC | 1 cut(s) | 1688 |
| Eco47I | GGWCC | 1 cut(s) | 1420 |
| Eco57I | CTGAAG | 5 cut(s) | 219, 596, 1167, 1548, 1656 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 815 |
| EcoRII | CCWGG | 4 cut(s) | 45, 154, 507, 543 |
| EcoT14I | CCWWGG | 2 cut(s) | 816, 948 |
| EcoT22I | ATGCAT | 1 cut(s) | 1107 |
| ErhI | CCWWGG | 2 cut(s) | 816, 948 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 969, 1001 |
| FaqI | GGGAC | 1 cut(s) | 147 |
| FauI | CCCGC | 2 cut(s) | 172, 1398 |
| FauNDI | CATATG | 1 cut(s) | 878 |
| FbaI | TGATCA | 2 cut(s) | 310, 636 |
| Fnu4HI | GCNGC | 5 cut(s) | 105, 393, 453, 1023, 1383 |
| FokI | GGATG | 6 cut(s) | 128, 1103, 1295, 1487, 1558, 1769 |
| Fsp4HI | GCNGC | 5 cut(s) | 105, 393, 453, 1023, 1383 |
| FspBI | CTAG | 5 cut(s) | 731, 1139, 1247, 1536, 1649 |
| GluI | GCNGC | 5 cut(s) | 105, 393, 453, 1023, 1383 |
| GsuI | CTGGAG | 1 cut(s) | 1272 |
| HaeIII | GGCC | 2 cut(s) | 863, 1277 |
| HapII | CCGG | 2 cut(s) | 269, 735 |
| HgaI | GACGC | 2 cut(s) | 110, 1578 |
| Hin1I | GRCGYC | 1 cut(s) | 1589 |
| HincII | GTYRAC | 1 cut(s) | 1678 |
| HindII | GTYRAC | 1 cut(s) | 1678 |
| HpaII | CCGG | 2 cut(s) | 269, 735 |
| HphI | GGTGA | 8 cut(s) | 221, 646, 764, 955, 1060, 1124, 1669, 1680 |
| Hpy166II | GTNNAC | 2 cut(s) | 562, 1678 |
| Hpy188I | TCNGA | 7 cut(s) | 381, 520, 1013, 1186, 1416, 1633, 1700 |
| Hpy8I | GTNNAC | 2 cut(s) | 562, 1678 |
| HpyAV | CCTTC | 9 cut(s) | 25, 238, 273, 346, 850, 1045, 1081, 1123, 1291 |
| HpyCH4III | ACNGT | 6 cut(s) | 152, 355, 674, 808, 1424, 1682 |
| HpyCH4V | TGCA | 8 cut(s) | 499, 882, 1094, 1105, 1208, 1310, 1375, 1551 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1091, 1139, 1256, 1316 |
| HpyF3I | CTNAG | 7 cut(s) | 168, 378, 517, 1175, 1517, 1555, 1632 |
| Hsp92I | GRCGYC | 1 cut(s) | 1589 |
| KroI | GCCGGC | 1 cut(s) | 734 |
| KroNI | GCCGGC | 1 cut(s) | 736 |
| Ksp22I | TGATCA | 2 cut(s) | 310, 636 |
| Kzo9I | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| LmnI | GCTCC | 1 cut(s) | 29 |
| Lsp1109I | GCAGC | 5 cut(s) | 116, 404, 439, 1034, 1394 |
| LweI | GCATC | 5 cut(s) | 286, 904, 1081, 1212, 1560 |
| MaeI | CTAG | 5 cut(s) | 731, 1139, 1247, 1536, 1649 |
| MaeIII | GTNAC | 3 cut(s) | 1200, 1427, 1635 |
| MalI | GATC | 9 cut(s) | 312, 400, 432, 528, 638, 777, 1005, 1570, 1773 |
| MboI | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| MflI | RGATCY | 3 cut(s) | 398, 775, 1771 |
| MhlI | GDGCHC | 1 cut(s) | 543 |
| MluCI | AATT | 6 cut(s) | 221, 320, 440, 1134, 1393, 1694 |
| MlyI | GAGTC | 5 cut(s) | 506, 962, 1370, 1643, 1669 |
| Mph1103I | ATGCAT | 1 cut(s) | 1107 |
| MroNI | GCCGGC | 1 cut(s) | 734 |
| MroXI | GAANNNNTTC | 2 cut(s) | 225, 704 |
| MseI | TTAA | 1 cut(s) | 204 |
| MslI | CAYNNNNRTG | 3 cut(s) | 90, 968, 1110 |
| MspA1I | CMGCKG | 2 cut(s) | 107, 1385 |
| MspI | CCGG | 2 cut(s) | 269, 735 |
| MspR9I | CCNGG | 4 cut(s) | 47, 156, 509, 545 |
| Mva1269I | GAATGC | 1 cut(s) | 16 |
| MvaI | CCWGG | 4 cut(s) | 47, 156, 509, 545 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1091, 1139, 1256, 1316 |
| NaeI | GCCGGC | 1 cut(s) | 736 |
| NcoI | CCATGG | 1 cut(s) | 948 |
| NdeI | CATATG | 1 cut(s) | 878 |
| NdeII | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| NgoMIV | GCCGGC | 1 cut(s) | 734 |
| NlaIV | GGNNCC | 2 cut(s) | 542, 777 |
| NmeAIII | GCCGAG | 1 cut(s) | 1303 |
| NmuCI | GTSAC | 3 cut(s) | 1200, 1427, 1635 |
| NsiI | ATGCAT | 1 cut(s) | 1107 |
| NspI | RCATGY | 6 cut(s) | 89, 797, 1075, 1085, 1105, 1109 |
| PaeI | GCATGC | 1 cut(s) | 1109 |
| PagI | TCATGA | 2 cut(s) | 460, 667 |
| PciI | ACATGT | 2 cut(s) | 793, 1071 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 108 |
| PctI | GAATGC | 1 cut(s) | 16 |
| PdiI | GCCGGC | 1 cut(s) | 736 |
| PdmI | GAANNNNTTC | 2 cut(s) | 225, 704 |
| PfeI | GAWTC | 5 cut(s) | 172, 226, 382, 827, 1304 |
| PfoI | TCCNGGA | 2 cut(s) | 154, 507 |
| PkrI | GCNGC | 5 cut(s) | 106, 394, 454, 1024, 1384 |
| PleI | GAGTC | 5 cut(s) | 506, 961, 1369, 1642, 1668 |
| PpsI | GAGTC | 5 cut(s) | 506, 961, 1369, 1642, 1668 |
| PscI | ACATGT | 2 cut(s) | 793, 1071 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1425 |
| Psp6I | CCWGG | 4 cut(s) | 45, 154, 507, 543 |
| PspGI | CCWGG | 4 cut(s) | 45, 154, 507, 543 |
| PspN4I | GGNNCC | 2 cut(s) | 542, 777 |
| PspPI | GGNCC | 1 cut(s) | 1420 |
| PsuI | RGATCY | 3 cut(s) | 398, 775, 1771 |
| PvuII | CAGCTG | 1 cut(s) | 107 |
| RsaI | GTAC | 3 cut(s) | 648, 798, 1242 |
| RsaNI | GTAC | 3 cut(s) | 647, 797, 1241 |
| RseI | CAYNNNNRTG | 3 cut(s) | 90, 968, 1110 |
| SaqAI | TTAA | 1 cut(s) | 204 |
| SatI | GCNGC | 5 cut(s) | 105, 393, 453, 1023, 1383 |
| Sau3AI | GATC | 9 cut(s) | 310, 398, 430, 526, 636, 775, 1003, 1568, 1771 |
| Sau96I | GGNCC | 1 cut(s) | 1420 |
| SchI | GAGTC | 5 cut(s) | 506, 962, 1370, 1643, 1669 |
| ScrFI | CCNGG | 4 cut(s) | 47, 156, 509, 545 |
| SduI | GDGCHC | 1 cut(s) | 543 |
| SfaNI | GCATC | 5 cut(s) | 286, 904, 1081, 1212, 1560 |
| SinI | GGWCC | 1 cut(s) | 1420 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 90, 968, 1110 |
| SphI | GCATGC | 1 cut(s) | 1109 |
| Sse9I | AATT | 6 cut(s) | 221, 320, 440, 1134, 1393, 1694 |
| SsiI | CCGC | 3 cut(s) | 165, 1385, 1405 |
| SspI | AATATT | 1 cut(s) | 886 |
| SspMI | CTAG | 5 cut(s) | 731, 1139, 1247, 1536, 1649 |
| StyD4I | CCNGG | 4 cut(s) | 45, 154, 507, 543 |
| StyI | CCWWGG | 2 cut(s) | 816, 948 |
| TaaI | ACNGT | 6 cut(s) | 152, 355, 674, 808, 1424, 1682 |
| TaqI | TCGA | 5 cut(s) | 111, 708, 1168, 1356, 1364 |
| TasI | AATT | 6 cut(s) | 221, 320, 440, 1134, 1393, 1694 |
| TatI | WGTACW | 1 cut(s) | 646 |
| TfiI | GAWTC | 5 cut(s) | 172, 226, 382, 827, 1304 |
| Tru1I | TTAA | 1 cut(s) | 204 |
| Tru9I | TTAA | 1 cut(s) | 204 |
| TscAI | CASTG | 3 cut(s) | 202, 480, 1377 |
| TseFI | GTSAC | 3 cut(s) | 1200, 1427, 1635 |
| TseI | GCWGC | 5 cut(s) | 104, 392, 452, 1022, 1382 |
| Tsp45I | GTSAC | 3 cut(s) | 1200, 1427, 1635 |
| TspGWI | ACGGA | 1 cut(s) | 1327 |
| TspRI | CASTG | 3 cut(s) | 202, 480, 1377 |
| VpaK11BI | GGWCC | 1 cut(s) | 1420 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 815 |
| XapI | RAATTY | 4 cut(s) | 320, 440, 1393, 1694 |
| XceI | RCATGY | 6 cut(s) | 89, 797, 1075, 1085, 1105, 1109 |
| XmnI | GAANNNNTTC | 2 cut(s) | 225, 704 |
| XspI | CTAG | 5 cut(s) | 731, 1139, 1247, 1536, 1649 |
| Zsp2I | ATGCAT | 1 cut(s) | 1107 |