No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT4G02880 AT4G02880 |
| fragaria_vesca | FvH4_2g23870 FvH4_2g23870 FvH4_2g23870 FvH4_2g23870 |
| malus_domestica | MD03G1268400.v1.1 MD11G1289200.v1.1 |
| prunus_persica | Prupe.8G244100_v2.0.a1 Prupe.8G244100_v2.0.a1 |
| pyrus_communis | pycom03g21430 pycom11g25660 |
| rosa_chinensis | RchiOBHm_Chr6g0291481 |
| rosa_laevigata | RLG00000012112 |
| rosa_multiflora | Rmu_sc0003296.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00176020 |
| rosa_rugosa | Rorug06G0219800 Rorug06G0219900 |
| rosa_samantha | Rh6AG332000 Rh6BG338900 Rh6CG345100 Rh6DG332300 |
| rosa_wichuraiana | Rw6G028840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 72, 139 |
| AccB1I | GGYRCC | 1 cut(s) | 416 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 179 |
| AccBSI | CCGCTC | 2 cut(s) | 1345, 1487 |
| AclWI | GGATC | 2 cut(s) | 645, 1266 |
| AcoI | YGGCCR | 2 cut(s) | 1113, 1264 |
| AcsI | RAATTY | 3 cut(s) | 334, 1231, 1293 |
| AcuI | CTGAAG | 4 cut(s) | 983, 1005, 1386, 1476 |
| AcvI | CACGTG | 1 cut(s) | 500 |
| AdeI | CACNNNGTG | 1 cut(s) | 566 |
| AfaI | GTAC | 2 cut(s) | 110, 295 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 45, 179, 191, 235 |
| AflIII | ACRYGT | 1 cut(s) | 497 |
| AgeI | ACCGGT | 1 cut(s) | 105 |
| AgsI | TTSAA | 4 cut(s) | 275, 390, 746, 848 |
| AjnI | CCWGG | 2 cut(s) | 178, 822 |
| AleI | CACNNNNGTG | 2 cut(s) | 207, 236 |
| AluBI | AGCT | 9 cut(s) | 13, 191, 857, 898, 997, 1129, 1157, 1386, 1397 |
| AluI | AGCT | 9 cut(s) | 13, 191, 857, 898, 997, 1129, 1157, 1386, 1397 |
| Alw26I | GTCTC | 3 cut(s) | 689, 1008, 1102 |
| AlwI | GGATC | 2 cut(s) | 645, 1266 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 179 |
| Ama87I | CYCGRG | 1 cut(s) | 1372 |
| AoxI | GGCC | 5 cut(s) | 592, 1113, 1264, 1501, 1542 |
| ApeKI | GCWGC | 6 cut(s) | 10, 188, 355, 358, 1094, 1386 |
| ApoI | RAATTY | 3 cut(s) | 334, 1231, 1293 |
| AsiGI | ACCGGT | 1 cut(s) | 105 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 483 |
| AspS9I | GGNCC | 5 cut(s) | 182, 266, 593, 629, 820 |
| AsuC2I | CCSGG | 1 cut(s) | 1150 |
| AsuHPI | GGTGA | 3 cut(s) | 206, 250, 1500 |
| AsuII | TTCGAA | 1 cut(s) | 1235 |
| AvaI | CYCGRG | 1 cut(s) | 1372 |
| AvaII | GGWCC | 4 cut(s) | 182, 266, 629, 820 |
| BaeGI | GKGCMC | 1 cut(s) | 1150 |
| BanI | GGYRCC | 1 cut(s) | 416 |
| BbrPI | CACGTG | 1 cut(s) | 500 |
| BbsI | GAAGAC | 1 cut(s) | 1576 |
| BbvI | GCAGC | 6 cut(s) | 22, 200, 367, 370, 1106, 1373 |
| BccI | CCATC | 3 cut(s) | 1174, 1249, 1566 |
| BceAI | ACGGC | 2 cut(s) | 1097, 1516 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1192, 1226 |
| BciT130I | CCWGG | 2 cut(s) | 180, 824 |
| BciVI | GTATCC | 2 cut(s) | 280, 1378 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BcnI | CCSGG | 1 cut(s) | 1150 |
| BcoDI | GTCTC | 3 cut(s) | 689, 1008, 1102 |
| BfaI | CTAG | 4 cut(s) | 861, 1085, 1130, 1394 |
| BfuAI | ACCTGC | 2 cut(s) | 72, 139 |
| BfuI | GTATCC | 2 cut(s) | 280, 1378 |
| BisI | GCNGC | 8 cut(s) | 11, 189, 356, 359, 1092, 1095, 1267, 1387 |
| BlpI | GCTNAGC | 1 cut(s) | 1355 |
| BlsI | GCNGC | 8 cut(s) | 12, 190, 357, 360, 1093, 1096, 1268, 1388 |
| BmcAI | AGTACT | 1 cut(s) | 295 |
| Bme1390I | CCNGG | 3 cut(s) | 180, 824, 1150 |
| Bme18I | GGWCC | 4 cut(s) | 182, 266, 629, 820 |
| BmeT110I | CYCGRG | 1 cut(s) | 1372 |
| BmgT120I | GGNCC | 5 cut(s) | 182, 266, 593, 629, 820 |
| BmiI | GGNNCC | 5 cut(s) | 171, 214, 418, 1069, 1350 |
| BmrFI | CCNGG | 3 cut(s) | 180, 824, 1150 |
| BmsI | GCATC | 8 cut(s) | 129, 271, 377, 394, 632, 1050, 1078, 1398 |
| BoxI | GACNNNNGTC | 1 cut(s) | 573 |
| BpiI | GAAGAC | 1 cut(s) | 1576 |
| BpmI | CTGGAG | 1 cut(s) | 969 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1355 |
| Bpu14I | TTCGAA | 1 cut(s) | 1235 |
| BpuEI | CTTGAG | 2 cut(s) | 1094, 1472 |
| BpuMI | CCSGG | 1 cut(s) | 1150 |
| BsaAI | YACGTR | 1 cut(s) | 500 |
| BsaI | GGTCTC | 1 cut(s) | 689 |
| BsaJI | CCNNGG | 4 cut(s) | 420, 665, 783, 1539 |
| BsaWI | WCCGGW | 1 cut(s) | 105 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 986, 1016 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 45, 179, 191, 235 |
| Bse118I | RCCGGY | 2 cut(s) | 105, 184 |
| Bse1I | ACTGG | 2 cut(s) | 301, 1116 |
| Bse3DI | GCAATG | 1 cut(s) | 254 |
| BseBI | CCWGG | 2 cut(s) | 180, 824 |
| BseDI | CCNNGG | 4 cut(s) | 420, 665, 783, 1539 |
| BseGI | GGATG | 5 cut(s) | 1389, 1409, 1577, 1582, 1606 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 45, 179, 191, 235 |
| BseMI | GCAATG | 1 cut(s) | 254 |
| BseMII | CTCAG | 1 cut(s) | 639 |
| BseNI | ACTGG | 2 cut(s) | 301, 1116 |
| BseRI | GAGGAG | 2 cut(s) | 707, 908 |
| BseSI | GKGCMC | 1 cut(s) | 1150 |
| BseXI | GCAGC | 6 cut(s) | 22, 200, 367, 370, 1106, 1373 |
| BsgI | GTGCAG | 1 cut(s) | 100 |
| BshFI | GGCC | 5 cut(s) | 594, 1115, 1266, 1503, 1544 |
| BshNI | GGYRCC | 1 cut(s) | 416 |
| BshTI | ACCGGT | 1 cut(s) | 105 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1372 |
| BsiSI | CCGG | 3 cut(s) | 106, 185, 1150 |
| BslFI | GGGAC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 45, 179, 191, 235 |
| BsmAI | GTCTC | 3 cut(s) | 689, 1008, 1102 |
| BsmFI | GGGAC | 1 cut(s) | 111 |
| BsmI | GAATGC | 1 cut(s) | 1427 |
| BsnI | GGCC | 5 cut(s) | 594, 1115, 1266, 1503, 1544 |
| Bso31I | GGTCTC | 1 cut(s) | 689 |
| BsoBI | CYCGRG | 1 cut(s) | 1372 |
| Bsp119I | TTCGAA | 1 cut(s) | 1235 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1150 |
| Bsp143I | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1355 |
| Bsp19I | CCATGG | 1 cut(s) | 783 |
| BspANI | GGCC | 5 cut(s) | 594, 1115, 1266, 1503, 1544 |
| BspCNI | CTCAG | 1 cut(s) | 640 |
| BspLI | GGNNCC | 5 cut(s) | 171, 214, 418, 1069, 1350 |
| BspMI | ACCTGC | 2 cut(s) | 72, 139 |
| BspPI | GGATC | 2 cut(s) | 645, 1266 |
| BspT104I | TTCGAA | 1 cut(s) | 1235 |
| BspT107I | GGYRCC | 1 cut(s) | 416 |
| BspTNI | GGTCTC | 1 cut(s) | 689 |
| BsrBI | CCGCTC | 2 cut(s) | 1345, 1487 |
| BsrDI | GCAATG | 1 cut(s) | 254 |
| BsrFI | RCCGGY | 2 cut(s) | 105, 184 |
| BsrI | ACTGG | 2 cut(s) | 301, 1116 |
| BssAI | RCCGGY | 2 cut(s) | 105, 184 |
| BssECI | CCNNGG | 4 cut(s) | 420, 665, 783, 1539 |
| BssMI | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| BssT1I | CCWWGG | 4 cut(s) | 420, 665, 783, 1539 |
| Bst2UI | CCWGG | 2 cut(s) | 180, 824 |
| Bst4CI | ACNGT | 3 cut(s) | 564, 659, 1568 |
| Bst6I | CTCTTC | 2 cut(s) | 603, 729 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 554 |
| BstBAI | YACGTR | 1 cut(s) | 500 |
| BstBI | TTCGAA | 1 cut(s) | 1235 |
| BstC8I | GCNNGC | 1 cut(s) | 1480 |
| BstDEI | CTNAG | 4 cut(s) | 28, 438, 648, 1355 |
| BstDSI | CCRYGG | 1 cut(s) | 783 |
| BstF5I | GGATG | 5 cut(s) | 1389, 1409, 1577, 1582, 1606 |
| BstKTI | GATC | 5 cut(s) | 202, 640, 741, 1261, 1549 |
| BstMAI | GTCTC | 3 cut(s) | 689, 1008, 1102 |
| BstMBI | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| BstNI | CCWGG | 2 cut(s) | 180, 824 |
| BstNSI | RCATGY | 2 cut(s) | 548, 920 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 573 |
| BstSCI | CCNGG | 3 cut(s) | 178, 822, 1148 |
| BstSLI | GKGCMC | 1 cut(s) | 1150 |
| BstV1I | GCAGC | 6 cut(s) | 22, 200, 367, 370, 1106, 1373 |
| BstV2I | GAAGAC | 1 cut(s) | 1576 |
| BsuI | GTATCC | 2 cut(s) | 280, 1378 |
| BsuRI | GGCC | 5 cut(s) | 594, 1115, 1266, 1503, 1544 |
| BtgI | CCRYGG | 1 cut(s) | 783 |
| BtsCI | GGATG | 5 cut(s) | 1389, 1409, 1577, 1582, 1606 |
| BtsI | GCAGTG | 1 cut(s) | 315 |
| BtsIMutI | CAGTG | 2 cut(s) | 315, 569 |
| BveI | ACCTGC | 2 cut(s) | 72, 139 |
| Cac8I | GCNNGC | 1 cut(s) | 1480 |
| CaiI | CAGNNNCTG | 1 cut(s) | 179 |
| Cfr10I | RCCGGY | 2 cut(s) | 105, 184 |
| Cfr13I | GGNCC | 5 cut(s) | 182, 266, 593, 629, 820 |
| CseI | GACGC | 1 cut(s) | 935 |
| Csp6I | GTAC | 2 cut(s) | 109, 294 |
| CspAI | ACCGGT | 1 cut(s) | 105 |
| CviQI | GTAC | 2 cut(s) | 109, 294 |
| DdeI | CTNAG | 4 cut(s) | 28, 438, 648, 1355 |
| DpnI | GATC | 5 cut(s) | 201, 639, 740, 1260, 1548 |
| DpnII | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| DraIII | CACNNNGTG | 1 cut(s) | 566 |
| EaeI | YGGCCR | 2 cut(s) | 1113, 1264 |
| Eam1104I | CTCTTC | 2 cut(s) | 603, 729 |
| EarI | CTCTTC | 2 cut(s) | 603, 729 |
| EciI | GGCGGA | 1 cut(s) | 1238 |
| Eco130I | CCWWGG | 4 cut(s) | 420, 665, 783, 1539 |
| Eco31I | GGTCTC | 1 cut(s) | 689 |
| Eco32I | GATATC | 1 cut(s) | 877 |
| Eco47I | GGWCC | 4 cut(s) | 182, 266, 629, 820 |
| Eco57I | CTGAAG | 4 cut(s) | 983, 1005, 1386, 1476 |
| Eco72I | CACGTG | 1 cut(s) | 500 |
| Eco88I | CYCGRG | 1 cut(s) | 1372 |
| EcoO109I | RGGNCCY | 1 cut(s) | 593 |
| EcoRII | CCWGG | 2 cut(s) | 178, 822 |
| EcoRV | GATATC | 1 cut(s) | 877 |
| EcoT14I | CCWWGG | 4 cut(s) | 420, 665, 783, 1539 |
| ErhI | CCWWGG | 4 cut(s) | 420, 665, 783, 1539 |
| FaqI | GGGAC | 1 cut(s) | 111 |
| FauI | CCCGC | 2 cut(s) | 1338, 1492 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| Fnu4HI | GCNGC | 8 cut(s) | 11, 189, 356, 359, 1092, 1095, 1267, 1387 |
| FokI | GGATG | 4 cut(s) | 1376, 1396, 1584, 1589 |
| Fsp4HI | GCNGC | 8 cut(s) | 11, 189, 356, 359, 1092, 1095, 1267, 1387 |
| FspBI | CTAG | 4 cut(s) | 861, 1085, 1130, 1394 |
| GluI | GCNGC | 8 cut(s) | 11, 189, 356, 359, 1092, 1095, 1267, 1387 |
| GsuI | CTGGAG | 1 cut(s) | 969 |
| HaeIII | GGCC | 5 cut(s) | 594, 1115, 1266, 1503, 1544 |
| HapII | CCGG | 3 cut(s) | 106, 185, 1150 |
| HgaI | GACGC | 1 cut(s) | 935 |
| HincII | GTYRAC | 1 cut(s) | 1498 |
| HindII | GTYRAC | 1 cut(s) | 1498 |
| HindIII | AAGCTT | 1 cut(s) | 855 |
| HpaII | CCGG | 3 cut(s) | 106, 185, 1150 |
| HphI | GGTGA | 3 cut(s) | 206, 250, 1500 |
| Hpy166II | GTNNAC | 3 cut(s) | 131, 250, 1498 |
| Hpy188I | TCNGA | 7 cut(s) | 89, 280, 319, 649, 1024, 1254, 1326 |
| Hpy188III | TCNNGA | 8 cut(s) | 173, 578, 731, 848, 1005, 1196, 1310, 1442 |
| Hpy8I | GTNNAC | 3 cut(s) | 131, 250, 1498 |
| Hpy99I | CGWCG | 2 cut(s) | 1568, 1592 |
| HpyAV | CCTTC | 4 cut(s) | 112, 118, 1468, 1500 |
| HpyCH4III | ACNGT | 3 cut(s) | 564, 659, 1568 |
| HpyCH4IV | ACGT | 1 cut(s) | 499 |
| HpyF3I | CTNAG | 4 cut(s) | 28, 438, 648, 1355 |
| HpySE526I | ACGT | 1 cut(s) | 499 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| LmnI | GCTCC | 4 cut(s) | 562, 895, 994, 1492 |
| Lsp1109I | GCAGC | 6 cut(s) | 22, 200, 367, 370, 1106, 1373 |
| LweI | GCATC | 8 cut(s) | 129, 271, 377, 394, 632, 1050, 1078, 1398 |
| MaeI | CTAG | 4 cut(s) | 861, 1085, 1130, 1394 |
| MaeII | ACGT | 1 cut(s) | 499 |
| MaeIII | GTNAC | 4 cut(s) | 566, 1239, 1307, 1455 |
| MalI | GATC | 5 cut(s) | 201, 639, 740, 1260, 1548 |
| MbiI | CCGCTC | 2 cut(s) | 1345, 1487 |
| MboI | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| MboII | GAAGA | 8 cut(s) | 522, 590, 746, 758, 1151, 1392, 1576, 1604 |
| MhlI | GDGCHC | 1 cut(s) | 1150 |
| MluCI | AATT | 7 cut(s) | 153, 334, 466, 972, 1231, 1293, 1595 |
| MlyI | GAGTC | 5 cut(s) | 93, 245, 391, 1208, 1370 |
| MroXI | GAANNNNTTC | 1 cut(s) | 483 |
| MseI | TTAA | 3 cut(s) | 156, 900, 1053 |
| MslI | CAYNNNNRTG | 3 cut(s) | 207, 236, 800 |
| MspA1I | CMGCKG | 3 cut(s) | 13, 191, 1097 |
| MspI | CCGG | 3 cut(s) | 106, 185, 1150 |
| MspR9I | CCNGG | 3 cut(s) | 180, 824, 1150 |
| Mva1269I | GAATGC | 1 cut(s) | 1427 |
| MvaI | CCWGG | 2 cut(s) | 180, 824 |
| NciI | CCSGG | 1 cut(s) | 1150 |
| NcoI | CCATGG | 1 cut(s) | 783 |
| NdeII | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| NlaIV | GGNNCC | 5 cut(s) | 171, 214, 418, 1069, 1350 |
| NmeAIII | GCCGAG | 1 cut(s) | 1141 |
| NmuCI | GTSAC | 2 cut(s) | 566, 1307 |
| NspI | RCATGY | 2 cut(s) | 548, 920 |
| NspV | TTCGAA | 1 cut(s) | 1235 |
| OliI | CACNNNNGTG | 2 cut(s) | 207, 236 |
| PaeR7I | CTCGAG | 1 cut(s) | 1372 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1379, 1587 |
| PctI | GAATGC | 1 cut(s) | 1427 |
| PdmI | GAANNNNTTC | 1 cut(s) | 483 |
| PfeI | GAWTC | 7 cut(s) | 161, 479, 512, 527, 749, 788, 1048 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 179 |
| PfoI | TCCNGGA | 1 cut(s) | 822 |
| PinAI | ACCGGT | 1 cut(s) | 105 |
| PkrI | GCNGC | 8 cut(s) | 12, 190, 357, 360, 1093, 1096, 1268, 1388 |
| PleI | GAGTC | 5 cut(s) | 93, 245, 390, 1207, 1369 |
| PmaCI | CACGTG | 1 cut(s) | 500 |
| PmlI | CACGTG | 1 cut(s) | 500 |
| PpsI | GAGTC | 5 cut(s) | 93, 245, 390, 1207, 1369 |
| Ppu21I | YACGTR | 1 cut(s) | 500 |
| PshAI | GACNNNNGTC | 1 cut(s) | 573 |
| Psp6I | CCWGG | 2 cut(s) | 178, 822 |
| PspCI | CACGTG | 1 cut(s) | 500 |
| PspGI | CCWGG | 2 cut(s) | 178, 822 |
| PspN4I | GGNNCC | 5 cut(s) | 171, 214, 418, 1069, 1350 |
| PspPI | GGNCC | 5 cut(s) | 182, 266, 593, 629, 820 |
| PspXI | VCTCGAGB | 1 cut(s) | 1372 |
| PstNI | CAGNNNCTG | 1 cut(s) | 179 |
| PvuII | CAGCTG | 2 cut(s) | 13, 191 |
| RsaI | GTAC | 2 cut(s) | 110, 295 |
| RsaNI | GTAC | 2 cut(s) | 109, 294 |
| RseI | CAYNNNNRTG | 3 cut(s) | 207, 236, 800 |
| SaqAI | TTAA | 3 cut(s) | 156, 900, 1053 |
| SatI | GCNGC | 8 cut(s) | 11, 189, 356, 359, 1092, 1095, 1267, 1387 |
| Sau3AI | GATC | 5 cut(s) | 199, 637, 738, 1258, 1546 |
| Sau96I | GGNCC | 5 cut(s) | 182, 266, 593, 629, 820 |
| ScaI | AGTACT | 1 cut(s) | 295 |
| SchI | GAGTC | 5 cut(s) | 93, 245, 391, 1208, 1370 |
| ScrFI | CCNGG | 3 cut(s) | 180, 824, 1150 |
| SduI | GDGCHC | 1 cut(s) | 1150 |
| SfaNI | GCATC | 8 cut(s) | 129, 271, 377, 394, 632, 1050, 1078, 1398 |
| Sfr274I | CTCGAG | 1 cut(s) | 1372 |
| SfuI | TTCGAA | 1 cut(s) | 1235 |
| SinI | GGWCC | 4 cut(s) | 182, 266, 629, 820 |
| SlaI | CTCGAG | 1 cut(s) | 1372 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 207, 236, 800 |
| SmlI | CTYRAG | 3 cut(s) | 1073, 1372, 1451 |
| SmoI | CTYRAG | 3 cut(s) | 1073, 1372, 1451 |
| Sse9I | AATT | 7 cut(s) | 153, 334, 466, 972, 1231, 1293, 1595 |
| SspI | AATATT | 2 cut(s) | 721, 1209 |
| SspMI | CTAG | 4 cut(s) | 861, 1085, 1130, 1394 |
| StyD4I | CCNGG | 3 cut(s) | 178, 822, 1148 |
| StyI | CCWWGG | 4 cut(s) | 420, 665, 783, 1539 |
| TaaI | ACNGT | 3 cut(s) | 564, 659, 1568 |
| TaiI | ACGT | 1 cut(s) | 502 |
| TaqI | TCGA | 9 cut(s) | 20, 1006, 1202, 1235, 1373, 1431, 1524, 1563, 1587 |
| TaqII | GACCGA | 1 cut(s) | 781 |
| TasI | AATT | 7 cut(s) | 153, 334, 466, 972, 1231, 1293, 1595 |
| TatI | WGTACW | 1 cut(s) | 293 |
| TauI | GCSGC | 2 cut(s) | 1094, 1269 |
| TfiI | GAWTC | 7 cut(s) | 161, 479, 512, 527, 749, 788, 1048 |
| Tru1I | TTAA | 3 cut(s) | 156, 900, 1053 |
| Tru9I | TTAA | 3 cut(s) | 156, 900, 1053 |
| TscAI | CASTG | 2 cut(s) | 315, 569 |
| TseFI | GTSAC | 2 cut(s) | 566, 1307 |
| TseI | GCWGC | 6 cut(s) | 10, 188, 355, 358, 1094, 1386 |
| Tsp45I | GTSAC | 2 cut(s) | 566, 1307 |
| TspDTI | ATGAA | 4 cut(s) | 347, 507, 932, 1430 |
| TspRI | CASTG | 2 cut(s) | 315, 569 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 179 |
| VpaK11BI | GGWCC | 4 cut(s) | 182, 266, 629, 820 |
| XapI | RAATTY | 3 cut(s) | 334, 1231, 1293 |
| XceI | RCATGY | 2 cut(s) | 548, 920 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1420 |
| XhoI | CTCGAG | 1 cut(s) | 1372 |
| XmnI | GAANNNNTTC | 1 cut(s) | 483 |
| XspI | CTAG | 4 cut(s) | 861, 1085, 1130, 1394 |
| ZrmI | AGTACT | 1 cut(s) | 295 |