AT4G14600

Bet1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0011975
Physical Location & Seq
Forward (+)
8376400 .. 8378389
1990 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14600.1

Sequence Viewer

Length: 414 bp
ATGGCGTCAAATCCACACAGAAGCGGTGCGGGTGGTTCCCTTTATGGCGGAGCCGCTCCATACAGATCTAGGGAAGGGCTTAGTACTAGAAATGCTGCAGGTTCAGAAGAAATCCAGCTGAGGATTGATCCGATGCACTCTGACCTGGATGATGAGATCACAGGTCTCCATGGCCAAGTCAGGCAGTTGAAAAATATTGCTCAAGAAATTGGGTCAGAAGCAAAGTTTCAGAGAGACTTCTTAGATGAACTGCAAATGACATTGATCAGAGCGCAAGCCGGGGTGAAGAACAACATAAGGAAACTAAACATGAGCATAATCCGTAGTGGCAACAACCACATCATGCACGTGGTTCTTTTCGCTCTCCTCGTCTTCTTTGTCCTCTACATCTGGTCTAAGATGTTCAAAAGATAA

Protein Analysis

137

Amino Acids

15.38

Weight (kDa)

9.69

Isoelectric Point (pI)

58.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011975)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G29060 AT1G29060 AT4G14600
fragaria_vesca FvH4_5g35960
malus_domestica MD08G1191600.v1.1 MD15G1380400.v1.1
prunus_persica Prupe.1G526600_v2.0.a1
pyrus_communis pycom08g16510 pycom15g34070
rosa_chinensis RchiOBHm_Chr7g0237701
rosa_multiflora Rmu_ssc0000067.1_g000046
rosa_roxburghii Rroxscaffold_3G00223860
rosa_rugosa Rorug07G0306500
rosa_samantha Rh2AG620100 Rh7AG463200 Rh7BG433400 Rh7CG480100 Rh7DG449100
rosa_wichuraiana Rw7G038320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 89
AccBSI CCGCTC 1 cut(s) 56
AciI CCGC 4 cut(s) 24, 29, 48, 54
AclWI GGATC 1 cut(s) 122
AcoI YGGCCR 1 cut(s) 172
AcvI CACGTG 1 cut(s) 349
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 85
AgsI TTSAA 2 cut(s) 190, 406
AjnI CCWGG 1 cut(s) 144
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
Alw26I GTCTC 2 cut(s) 170, 228
AlwI GGATC 1 cut(s) 122
AoxI GGCC 1 cut(s) 172
ApeKI GCWGC 1 cut(s) 95
AspLEI GCGC 1 cut(s) 274
AsuC2I CCSGG 1 cut(s) 280
AsuHPI GGTGA 1 cut(s) 295
BalI TGGCCA 1 cut(s) 174
BbrPI CACGTG 1 cut(s) 349
BbsI GAAGAC 1 cut(s) 364
BbvCI CCTCAGC 1 cut(s) 119
BbvI GCAGC 1 cut(s) 82
BciT130I CCWGG 1 cut(s) 146
BclI TGATCA 1 cut(s) 264
BcnI CCSGG 1 cut(s) 280
BcoDI GTCTC 2 cut(s) 170, 228
BfaI CTAG 2 cut(s) 69, 87
BfmI CTRYAG 1 cut(s) 96
BfuAI ACCTGC 1 cut(s) 89
BglII AGATCT 1 cut(s) 65
BisI GCNGC 2 cut(s) 54, 96
BlsI GCNGC 2 cut(s) 55, 97
BmcAI AGTACT 1 cut(s) 85
Bme1390I CCNGG 2 cut(s) 146, 280
BmiI GGNNCC 2 cut(s) 37, 52
BmrFI CCNGG 2 cut(s) 146, 280
BmsI GCATC 1 cut(s) 123
BpiI GAAGAC 1 cut(s) 364
Bpu10I CCTNAGC 1 cut(s) 119
BpuEI CTTGAG 1 cut(s) 186
BpuMI CCSGG 1 cut(s) 280
BsaAI YACGTR 1 cut(s) 349
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 170
BsaJI CCNNGG 2 cut(s) 169, 279
BseBI CCWGG 1 cut(s) 146
BseDI CCNNGG 2 cut(s) 169, 279
BseGI GGATG 1 cut(s) 154
BseMII CTCAG 1 cut(s) 110
BseRI GAGGAG 1 cut(s) 356
BseXI GCAGC 1 cut(s) 82
BshFI GGCC 1 cut(s) 174
BsiSI CCGG 1 cut(s) 279
BsmAI GTCTC 2 cut(s) 170, 228
BsnI GGCC 1 cut(s) 174
Bso31I GGTCTC 1 cut(s) 170
Bsp143I GATC 4 cut(s) 65, 127, 156, 264
Bsp19I CCATGG 1 cut(s) 169
BspACI CCGC 4 cut(s) 24, 29, 48, 54
BspANI GGCC 1 cut(s) 174
BspCNI CTCAG 1 cut(s) 111
BspLI GGNNCC 2 cut(s) 37, 52
BspMAI CTGCAG 1 cut(s) 100
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 122
BspTNI GGTCTC 1 cut(s) 170
BsrBI CCGCTC 1 cut(s) 56
BssECI CCNNGG 2 cut(s) 169, 279
BssMI GATC 4 cut(s) 65, 127, 156, 264
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 169
Bst2UI CCWGG 1 cut(s) 146
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 349
BstC8I GCNNGC 1 cut(s) 276
BstDEI CTNAG 4 cut(s) 80, 119, 241, 396
BstDSI CCRYGG 1 cut(s) 169
BstF5I GGATG 1 cut(s) 154
BstHHI GCGC 1 cut(s) 274
BstKTI GATC 4 cut(s) 68, 130, 159, 267
BstMAI GTCTC 2 cut(s) 170, 228
BstMBI GATC 4 cut(s) 65, 127, 156, 264
BstNI CCWGG 1 cut(s) 146
BstSCI CCNGG 2 cut(s) 144, 278
BstSFI CTRYAG 1 cut(s) 96
BstV1I GCAGC 1 cut(s) 82
BstV2I GAAGAC 1 cut(s) 364
BstX2I RGATCY 1 cut(s) 65
BstYI RGATCY 1 cut(s) 65
BsuRI GGCC 1 cut(s) 174
BtgI CCRYGG 1 cut(s) 169
BtsCI GGATG 1 cut(s) 154
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 276
CfoI GCGC 1 cut(s) 274
Csp6I GTAC 1 cut(s) 84
CviAII CATG 3 cut(s) 170, 310, 343
CviJI RGCY 5 cut(s) 53, 79, 118, 174, 278
CviKI_1 RGCY 5 cut(s) 53, 79, 118, 174, 278
CviQI GTAC 1 cut(s) 84
DdeI CTNAG 4 cut(s) 80, 119, 241, 396
DpnI GATC 4 cut(s) 67, 129, 158, 266
DpnII GATC 4 cut(s) 65, 127, 156, 264
EaeI YGGCCR 1 cut(s) 172
EciI GGCGGA 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 169
Eco31I GGTCTC 1 cut(s) 170
Eco72I CACGTG 1 cut(s) 349
EcoRII CCWGG 1 cut(s) 144
EcoT14I CCWWGG 1 cut(s) 169
ErhI CCWWGG 1 cut(s) 169
FaeI CATG 3 cut(s) 173, 313, 346
FaiI YATR 7 cut(s) 45, 61, 171, 296, 311, 317, 344
FatI CATG 3 cut(s) 169, 309, 342
FauI CCCGC 1 cut(s) 22
FbaI TGATCA 1 cut(s) 264
Fnu4HI GCNGC 2 cut(s) 54, 96
FokI GGATG 1 cut(s) 161
Fsp4HI GCNGC 2 cut(s) 54, 96
FspBI CTAG 2 cut(s) 69, 87
GlaI GCGC 1 cut(s) 273
GluI GCNGC 2 cut(s) 54, 96
HaeIII GGCC 1 cut(s) 174
HapII CCGG 1 cut(s) 279
HhaI GCGC 1 cut(s) 274
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 173, 313, 346
Hin6I GCGC 1 cut(s) 272
HinP1I GCGC 1 cut(s) 272
HpaII CCGG 1 cut(s) 279
HphI GGTGA 1 cut(s) 295
Hpy188I TCNGA 6 cut(s) 106, 132, 142, 217, 231, 269
Hpy188III TCNNGA 1 cut(s) 203
HpyAV CCTTC 1 cut(s) 68
HpyCH4IV ACGT 1 cut(s) 348
HpyCH4V TGCA 4 cut(s) 98, 136, 253, 346
HpyF3I CTNAG 4 cut(s) 80, 119, 241, 396
HpySE526I ACGT 1 cut(s) 348
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 173, 313, 346
HspAI GCGC 1 cut(s) 272
Ksp22I TGATCA 1 cut(s) 264
Kzo9I GATC 4 cut(s) 65, 127, 156, 264
LmnI GCTCC 2 cut(s) 50, 61
LpnPI CCDG 8 cut(s) 84, 128, 131, 147, 158, 166, 292, 376
Lsp1109I GCAGC 1 cut(s) 82
LweI GCATC 1 cut(s) 123
MaeI CTAG 2 cut(s) 69, 87
MaeII ACGT 1 cut(s) 348
MalI GATC 4 cut(s) 67, 129, 158, 266
MbiI CCGCTC 1 cut(s) 56
MboI GATC 4 cut(s) 65, 127, 156, 264
MboII GAAGA 3 cut(s) 119, 298, 364
MflI RGATCY 1 cut(s) 65
MlsI TGGCCA 1 cut(s) 174
MluCI AATT 1 cut(s) 207
MluNI TGGCCA 1 cut(s) 174
MnlI CCTC 3 cut(s) 114, 377, 392
Mox20I TGGCCA 1 cut(s) 174
MscI TGGCCA 1 cut(s) 174
MslI CAYNNNNRTG 1 cut(s) 347
Msp20I TGGCCA 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 118
MspI CCGG 1 cut(s) 279
MspR9I CCNGG 2 cut(s) 146, 280
MvaI CCWGG 1 cut(s) 146
NciI CCSGG 1 cut(s) 280
NcoI CCATGG 1 cut(s) 169
NdeII GATC 4 cut(s) 65, 127, 156, 264
NlaIII CATG 3 cut(s) 173, 313, 346
NlaIV GGNNCC 2 cut(s) 37, 52
PcsI WCGNNNNNNNCGW 1 cut(s) 366
PkrI GCNGC 2 cut(s) 55, 97
PmaCI CACGTG 1 cut(s) 349
PmlI CACGTG 1 cut(s) 349
Ppu21I YACGTR 1 cut(s) 349
Psp6I CCWGG 1 cut(s) 144
PspCI CACGTG 1 cut(s) 349
PspGI CCWGG 1 cut(s) 144
PspN4I GGNNCC 2 cut(s) 37, 52
PstI CTGCAG 1 cut(s) 100
PsuI RGATCY 1 cut(s) 65
PvuII CAGCTG 1 cut(s) 118
RsaI GTAC 1 cut(s) 85
RsaNI GTAC 1 cut(s) 84
RseI CAYNNNNRTG 1 cut(s) 347
SatI GCNGC 2 cut(s) 54, 96
Sau3AI GATC 4 cut(s) 65, 127, 156, 264
ScaI AGTACT 1 cut(s) 85
ScrFI CCNGG 2 cut(s) 146, 280
SetI ASST 5 cut(s) 103, 120, 147, 166, 351
SfaNI GCATC 1 cut(s) 123
SfcI CTRYAG 1 cut(s) 96
SmiMI CAYNNNNRTG 1 cut(s) 347
SmlI CTYRAG 1 cut(s) 201
SmoI CTYRAG 1 cut(s) 201
Sse9I AATT 1 cut(s) 207
SsiI CCGC 4 cut(s) 24, 29, 48, 54
SspI AATATT 1 cut(s) 196
SspMI CTAG 2 cut(s) 69, 87
StyD4I CCNGG 2 cut(s) 144, 278
StyI CCWWGG 1 cut(s) 169
TaiI ACGT 1 cut(s) 351
TasI AATT 1 cut(s) 207
TatI WGTACW 1 cut(s) 83
TauI GCSGC 1 cut(s) 56
TseI GCWGC 1 cut(s) 95
TspDTI ATGAA 1 cut(s) 261
TspGWI ACGGA 1 cut(s) 311
XspI CTAG 2 cut(s) 69, 87
ZrmI AGTACT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.