RchiOBHm_Chr7g0237701

Bet1-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
62865959 .. 62868630
2672 bp
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UTR
Exon/CDS
Intron
PRQ21303

Sequence Viewer

Length: 330 bp
ATGACGCATAGAAGGGCTAACCCAGATGAAATCCAATTGAGGATTGATCCAATTCACGCCGACGTCGATGAGGAGATCACTGGTCTTCGATCCCAAGTCAGAAGATTGAGAAACGTGGCTCAAGAGATTGAGGTTGAAGCCAAATCTCAGAATGCTATGCTCAATCAGCTGGACATGACAGTGATGAAAGCTCAAGCATGGTTGAAGAATAATGTCAGGAGATTGAACAAGAGCACCATCCAGAGTGGTTCAAACCATGTTGTCCATGTGGTGTGTTTTGCGCTCATTTGTTTCTTTTTGGTGTACTTTTGGTCAAAGATATCCAGATGA

Protein Analysis

109

Amino Acids

12.69

Weight (kDa)

9.5

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011975)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
AclWI GGATC 2 cut(s) 41, 84
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 1 cut(s) 305
AgsI TTSAA 4 cut(s) 137, 205, 226, 252
AluBI AGCT 2 cut(s) 169, 191
AluI AGCT 2 cut(s) 169, 191
Alw21I GWGCWC 1 cut(s) 236
AlwI GGATC 2 cut(s) 41, 84
AspLEI GCGC 1 cut(s) 283
BbsI GAAGAC 1 cut(s) 77
Bbv12I GWGCWC 1 cut(s) 236
BccI CCATC 1 cut(s) 245
BpiI GAAGAC 1 cut(s) 77
BpuEI CTTGAG 2 cut(s) 105, 177
BsaHI GRCGYC 1 cut(s) 63
Bse1I ACTGG 1 cut(s) 85
BseGI GGATG 1 cut(s) 237
BseMII CTCAG 1 cut(s) 161
BseNI ACTGG 1 cut(s) 85
BseRI GAGGAG 1 cut(s) 86
BsiHKAI GWGCWC 1 cut(s) 236
BsmI GAATGC 1 cut(s) 157
Bsp1286I GDGCHC 1 cut(s) 236
Bsp143I GATC 3 cut(s) 46, 75, 89
BspCNI CTCAG 1 cut(s) 160
BspPI GGATC 2 cut(s) 41, 84
BsrI ACTGG 1 cut(s) 85
BssMI GATC 3 cut(s) 46, 75, 89
BssNI GRCGYC 1 cut(s) 63
Bst4CI ACNGT 1 cut(s) 181
BstACI GRCGYC 1 cut(s) 63
BstDEI CTNAG 1 cut(s) 147
BstF5I GGATG 1 cut(s) 237
BstHHI GCGC 1 cut(s) 283
BstKTI GATC 3 cut(s) 49, 78, 92
BstMBI GATC 3 cut(s) 46, 75, 89
BstMWI GCNNNNNNNGC 1 cut(s) 166
BstV2I GAAGAC 1 cut(s) 77
BtsCI GGATG 1 cut(s) 237
BtsIMutI CAGTG 2 cut(s) 78, 186
CfoI GCGC 1 cut(s) 283
CseI GACGC 1 cut(s) 13
Csp6I GTAC 1 cut(s) 304
CviAII CATG 4 cut(s) 175, 198, 257, 266
CviJI RGCY 5 cut(s) 17, 119, 140, 169, 191
CviKI_1 RGCY 5 cut(s) 17, 119, 140, 169, 191
CviQI GTAC 1 cut(s) 304
DdeI CTNAG 1 cut(s) 147
DpnI GATC 3 cut(s) 48, 77, 91
DpnII GATC 3 cut(s) 46, 75, 89
Eco32I GATATC 1 cut(s) 321
EcoRV GATATC 1 cut(s) 321
FaeI CATG 4 cut(s) 178, 201, 260, 269
FaiI YATR 6 cut(s) 9, 158, 176, 199, 258, 267
FatI CATG 4 cut(s) 174, 197, 256, 265
FokI GGATG 1 cut(s) 224
GlaI GCGC 1 cut(s) 282
HgaI GACGC 1 cut(s) 13
HhaI GCGC 1 cut(s) 283
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 4 cut(s) 178, 201, 260, 269
Hin6I GCGC 1 cut(s) 281
HinP1I GCGC 1 cut(s) 281
Hpy166II GTNNAC 1 cut(s) 304
Hpy188I TCNGA 2 cut(s) 101, 150
Hpy188III TCNNGA 4 cut(s) 122, 217, 241, 324
Hpy8I GTNNAC 1 cut(s) 304
Hpy99I CGWCG 2 cut(s) 65, 68
HpyAV CCTTC 1 cut(s) 6
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4IV ACGT 2 cut(s) 63, 114
HpyF10VI GCNNNNNNNGC 1 cut(s) 166
HpyF3I CTNAG 1 cut(s) 147
HpySE526I ACGT 2 cut(s) 63, 114
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 4 cut(s) 178, 201, 260, 269
HspAI GCGC 1 cut(s) 281
Kzo9I GATC 3 cut(s) 46, 75, 89
LpnPI CCDG 5 cut(s) 36, 66, 155, 202, 254
MaeII ACGT 2 cut(s) 63, 114
MalI GATC 3 cut(s) 48, 77, 91
MboI GATC 3 cut(s) 46, 75, 89
MboII GAAGA 3 cut(s) 77, 114, 217
MfeI CAATTG 1 cut(s) 35
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 2 cut(s) 35, 51
MnlI CCTC 3 cut(s) 33, 64, 124
MslI CAYNNNNRTG 1 cut(s) 179
MspA1I CMGCKG 1 cut(s) 169
MunI CAATTG 1 cut(s) 35
Mva1269I GAATGC 1 cut(s) 157
MwoI GCNNNNNNNGC 1 cut(s) 166
NdeII GATC 3 cut(s) 46, 75, 89
NlaIII CATG 4 cut(s) 178, 201, 260, 269
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 157
PvuII CAGCTG 1 cut(s) 169
RsaI GTAC 1 cut(s) 305
RsaNI GTAC 1 cut(s) 304
RseI CAYNNNNRTG 1 cut(s) 179
Sau3AI GATC 3 cut(s) 46, 75, 89
SduI GDGCHC 1 cut(s) 236
SetI ASST 5 cut(s) 66, 117, 135, 171, 193
SmiMI CAYNNNNRTG 1 cut(s) 179
SmlI CTYRAG 2 cut(s) 120, 192
SmoI CTYRAG 2 cut(s) 120, 192
Sse9I AATT 2 cut(s) 35, 51
TaaI ACNGT 1 cut(s) 181
TaiI ACGT 2 cut(s) 66, 117
TaqI TCGA 2 cut(s) 66, 88
TasI AATT 2 cut(s) 35, 51
TatI WGTACW 1 cut(s) 303
TscAI CASTG 2 cut(s) 85, 186
TspDTI ATGAA 2 cut(s) 42, 200
TspRI CASTG 2 cut(s) 85, 186
ZraI GACGTC 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.