pycom08g16510

Bet1-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
16482537 .. 16485319
2783 bp
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UTR
Exon/CDS
Intron
pycom08g16510.2

Sequence Viewer

Length: 378 bp
ATGGCAGGCTATGGAAATGCTGTCCCCTACAGATCAAGGGAGGGTCTTAACCCAAGACCAGCGGCTAACATGGACGAAATCCAATTGAGGATCGATCCAATGCATGCTGACTTGGATGAAGACATCAACGGCCTCCACAACCAAGTGAGAAGATTGAGAAATGTAGCTCAAGTTATAGGTACGGAAGCTAAATTCCAGAATGAATTTCTGGATCAGCTGCATATGACGTTGTTGAAAGGTCAAGCAGGGCTGAAGAACAATGTCAGGAGACTGAACAGAAGCATTGTCCGGAGTGGATCAAACCATGTTGTCCACGTAGTGGCTTTTGGACTACTTTGTTTCTTTGTGGTATACTTTTGGTCCAAACTGTTCAGATGA

Protein Analysis

126

Amino Acids

14.3

Weight (kDa)

9.88

Isoelectric Point (pI)

38.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011975)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 319
AccI GTMKAC 1 cut(s) 351
AccIII TCCGGA 1 cut(s) 288
AciI CCGC 1 cut(s) 62
AclWI GGATC 4 cut(s) 89, 98, 219, 304
AcsI RAATTY 2 cut(s) 191, 203
AcuI CTGAAG 1 cut(s) 272
AdeI CACNNNGTG 1 cut(s) 319
AfaI GTAC 1 cut(s) 181
AfiI CCNNNNNNNGG 1 cut(s) 319
AgsI TTSAA 1 cut(s) 235
AluBI AGCT 3 cut(s) 167, 188, 217
AluI AGCT 3 cut(s) 167, 188, 217
Alw26I GTCTC 1 cut(s) 262
AlwI GGATC 4 cut(s) 89, 98, 219, 304
Aor13HI TCCGGA 1 cut(s) 288
AoxI GGCC 1 cut(s) 130
ApeKI GCWGC 1 cut(s) 217
ApoI RAATTY 2 cut(s) 191, 203
AspS9I GGNCC 1 cut(s) 360
AvaII GGWCC 1 cut(s) 360
BbsI GAAGAC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 204
BceAI ACGGC 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 262
BfmI CTRYAG 1 cut(s) 28
BisI GCNGC 2 cut(s) 63, 218
BlsI GCNGC 2 cut(s) 64, 219
Bme18I GGWCC 1 cut(s) 360
BmgT120I GGNCC 1 cut(s) 360
BpiI GAAGAC 1 cut(s) 126
BpuEI CTTGAG 1 cut(s) 153
Bsa29I ATCGAT 1 cut(s) 93
BsaAI YACGTR 1 cut(s) 316
BsaWI WCCGGW 1 cut(s) 288
Bsc4I CCNNNNNNNGG 1 cut(s) 319
BseAI TCCGGA 1 cut(s) 288
BseCI ATCGAT 1 cut(s) 93
BseGI GGATG 1 cut(s) 121
BseLI CCNNNNNNNGG 1 cut(s) 319
BseXI GCAGC 1 cut(s) 204
BshFI GGCC 1 cut(s) 132
BshVI ATCGAT 1 cut(s) 93
BsiSI CCGG 1 cut(s) 289
BslFI GGGAC 1 cut(s) 8
BslI CCNNNNNNNGG 1 cut(s) 319
BsmAI GTCTC 1 cut(s) 262
BsmFI GGGAC 1 cut(s) 8
BsnI GGCC 1 cut(s) 132
Bsp13I TCCGGA 1 cut(s) 288
Bsp143I GATC 5 cut(s) 32, 90, 94, 211, 296
BspACI CCGC 1 cut(s) 62
BspANI GGCC 1 cut(s) 132
BspDI ATCGAT 1 cut(s) 93
BspEI TCCGGA 1 cut(s) 288
BspPI GGATC 4 cut(s) 89, 98, 219, 304
BssMI GATC 5 cut(s) 32, 90, 94, 211, 296
BssNAI GTATAC 1 cut(s) 352
Bst1107I GTATAC 1 cut(s) 352
Bst4CI ACNGT 1 cut(s) 369
BstBAI YACGTR 1 cut(s) 316
BstC8I GCNNGC 2 cut(s) 7, 105
BstF5I GGATG 1 cut(s) 121
BstKTI GATC 5 cut(s) 35, 93, 97, 214, 299
BstMAI GTCTC 1 cut(s) 262
BstMBI GATC 5 cut(s) 32, 90, 94, 211, 296
BstNSI RCATGY 1 cut(s) 107
BstSFI CTRYAG 1 cut(s) 28
BstV1I GCAGC 1 cut(s) 204
BstV2I GAAGAC 1 cut(s) 126
BstZ17I GTATAC 1 cut(s) 352
Bsu15I ATCGAT 1 cut(s) 93
BsuRI GGCC 1 cut(s) 132
BsuTUI ATCGAT 1 cut(s) 93
BtsCI GGATG 1 cut(s) 121
Cac8I GCNNGC 2 cut(s) 7, 105
Cfr13I GGNCC 1 cut(s) 360
ClaI ATCGAT 1 cut(s) 93
Csp6I GTAC 1 cut(s) 180
CviAII CATG 3 cut(s) 70, 104, 305
CviJI RGCY 8 cut(s) 9, 65, 132, 167, 188, 217, 250, 323
CviKI_1 RGCY 8 cut(s) 9, 65, 132, 167, 188, 217, 250, 323
CviQI GTAC 1 cut(s) 180
DpnI GATC 5 cut(s) 34, 92, 96, 213, 298
DpnII GATC 5 cut(s) 32, 90, 94, 211, 296
DraIII CACNNNGTG 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 360
Eco57I CTGAAG 1 cut(s) 272
EcoT22I ATGCAT 1 cut(s) 105
FaeI CATG 3 cut(s) 73, 107, 308
FaiI YATR 8 cut(s) 12, 71, 105, 176, 222, 224, 306, 352
FaqI GGGAC 1 cut(s) 8
FatI CATG 3 cut(s) 69, 103, 304
FauNDI CATATG 1 cut(s) 222
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 2 cut(s) 63, 218
FokI GGATG 1 cut(s) 128
Fsp4HI GCNGC 2 cut(s) 63, 218
GluI GCNGC 2 cut(s) 63, 218
HaeIII GGCC 1 cut(s) 132
HapII CCGG 1 cut(s) 289
Hin1II CATG 3 cut(s) 73, 107, 308
HpaII CCGG 1 cut(s) 289
Hpy166II GTNNAC 2 cut(s) 313, 352
Hpy188I TCNGA 1 cut(s) 374
Hpy188III TCNNGA 4 cut(s) 196, 209, 265, 289
Hpy8I GTNNAC 2 cut(s) 313, 352
HpyCH4III ACNGT 1 cut(s) 369
HpyCH4IV ACGT 2 cut(s) 227, 315
HpyCH4V TGCA 2 cut(s) 103, 220
HpySE526I ACGT 2 cut(s) 227, 315
Hsp92II CATG 3 cut(s) 73, 107, 308
Kpn2I TCCGGA 1 cut(s) 288
Kzo9I GATC 5 cut(s) 32, 90, 94, 211, 296
LpnPI CCDG 6 cut(s) 72, 194, 209, 231, 250, 302
Lsp1109I GCAGC 1 cut(s) 204
MaeII ACGT 2 cut(s) 227, 315
MalI GATC 5 cut(s) 34, 92, 96, 213, 298
MboI GATC 5 cut(s) 32, 90, 94, 211, 296
MboII GAAGA 3 cut(s) 131, 162, 265
MfeI CAATTG 1 cut(s) 83
MluCI AATT 3 cut(s) 83, 191, 203
MnlI CCTC 3 cut(s) 34, 81, 143
Mph1103I ATGCAT 1 cut(s) 105
MroI TCCGGA 1 cut(s) 288
MseI TTAA 1 cut(s) 48
MspA1I CMGCKG 2 cut(s) 62, 217
MspI CCGG 1 cut(s) 289
MunI CAATTG 1 cut(s) 83
NdeI CATATG 1 cut(s) 222
NdeII GATC 5 cut(s) 32, 90, 94, 211, 296
NlaIII CATG 3 cut(s) 73, 107, 308
NsiI ATGCAT 1 cut(s) 105
NspI RCATGY 1 cut(s) 107
PaeI GCATGC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 319
PkrI GCNGC 2 cut(s) 64, 219
Ppu21I YACGTR 1 cut(s) 316
PspPI GGNCC 1 cut(s) 360
PvuII CAGCTG 1 cut(s) 217
RsaI GTAC 1 cut(s) 181
RsaNI GTAC 1 cut(s) 180
SaqAI TTAA 1 cut(s) 48
SatI GCNGC 2 cut(s) 63, 218
Sau3AI GATC 5 cut(s) 32, 90, 94, 211, 296
Sau96I GGNCC 1 cut(s) 360
SetI ASST 7 cut(s) 169, 181, 190, 219, 230, 241, 318
SfcI CTRYAG 1 cut(s) 28
SinI GGWCC 1 cut(s) 360
SmlI CTYRAG 1 cut(s) 168
SmoI CTYRAG 1 cut(s) 168
SphI GCATGC 1 cut(s) 107
Sse9I AATT 3 cut(s) 83, 191, 203
SsiI CCGC 1 cut(s) 62
TaaI ACNGT 1 cut(s) 369
TaiI ACGT 2 cut(s) 230, 318
TaqI TCGA 1 cut(s) 93
TasI AATT 3 cut(s) 83, 191, 203
TauI GCSGC 1 cut(s) 65
Tru1I TTAA 1 cut(s) 48
Tru9I TTAA 1 cut(s) 48
TseI GCWGC 1 cut(s) 217
TspDTI ATGAA 2 cut(s) 132, 216
TspGWI ACGGA 1 cut(s) 197
Van91I CCANNNNNTGG 1 cut(s) 319
VpaK11BI GGWCC 1 cut(s) 360
XapI RAATTY 2 cut(s) 191, 203
XceI RCATGY 1 cut(s) 107
XmiI GTMKAC 1 cut(s) 351
Zsp2I ATGCAT 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.