Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011975

Physical Location & Seq

Genomic Coordinates Reverse (-)

43110112 .. 43112973

Gene Structure 2862 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G526600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 378 bp

ATGGCGGCCTTTGGCAATGCTGCTCCATACAGATCAAGGGAAGGTCTTAGCACAAGACCAGCAGCTAGCTCTGATGAAATCCAATTGAGGATTGATCCAATGCATGCCGATTTGGATGATGAGATCACTGGTCTCCGATCCCAAGTGAGAAGATTGAGAAATGTAGCGCAAGATATAGAGGCGGAAGCAAAATTCCAGAATGAATTTCTCAATCAACTGCATATGACGCTGATGAAAGGTCAAGCAGGGTTGAAGAACAATGTCAGGAGATTGAACAAGAGCATCGTCCAGAGTGGAGCAAACCATGTTGTCCATGTAGTGGTTTTTGCGCTAATTTGTTTCTTTATGGTATACCTTTGGTCCAAAATGTTTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0006873 GO:0006875 GO:0006883 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0019725 GO:0030003 GO:0030004 GO:0042592 GO:0043181 GO:0043182 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0048878 GO:0050789 GO:0050801 GO:0051179 GO:0051235 GO:0051641 GO:0051651 GO:0055065 GO:0055067 GO:0055078 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0080134 GO:0098771 GO:1901000 GO:1901002

KEGG Pathways

Metabolic & Signaling

ko04130 map04130

Pfam Domains

Protein Families

No domains found.

Protein Analysis

126

Amino Acids

14.22

Weight (kDa)

9.64

Isoelectric Point (pI)

55.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29060 AT1G29060 AT4G14600
fragaria_vesca	FvH4_5g35960
malus_domestica	MD08G1191600.v1.1 MD15G1380400.v1.1
prunus_persica	Prupe.1G526600_v2.0.a1
pyrus_communis	pycom08g16510 pycom15g34070
rosa_chinensis	RchiOBHm_Chr7g0237701
rosa_multiflora	Rmu_ssc0000067.1_g000046
rosa_roxburghii	Rroxscaffold_3G00223860
rosa_rugosa	Rorug07G0306500
rosa_samantha	Rh2AG620100 Rh7AG463200 Rh7BG433400 Rh7CG480100 Rh7DG449100
rosa_wichuraiana	Rw7G038320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	319
AccI	GTMKAC	1 cut(s)	351
AciI	CCGC	2 cut(s)	5, 182
AclWI	GGATC	2 cut(s)	89, 132
AcsI	RAATTY	2 cut(s)	191, 203
AfiI	CCNNNNNNNGG	1 cut(s)	319
AgsI	TTSAA	2 cut(s)	253, 274
AluBI	AGCT	2 cut(s)	65, 69
AluI	AGCT	2 cut(s)	65, 69
Alw26I	GTCTC	1 cut(s)	137
AlwI	GGATC	2 cut(s)	89, 132
AoxI	GGCC	1 cut(s)	6
ApeKI	GCWGC	2 cut(s)	20, 62
ApoI	RAATTY	2 cut(s)	191, 203
AspLEI	GCGC	2 cut(s)	169, 331
AspS9I	GGNCC	1 cut(s)	360
AsuNHI	GCTAGC	1 cut(s)	65
AvaII	GGWCC	1 cut(s)	360
BbvI	GCAGC	2 cut(s)	7, 74
BcoDI	GTCTC	1 cut(s)	137
BfaI	CTAG	1 cut(s)	66
BisI	GCNGC	3 cut(s)	6, 21, 63
BlsI	GCNGC	3 cut(s)	7, 22, 64
Bme18I	GGWCC	1 cut(s)	360
BmgT120I	GGNCC	1 cut(s)	360
BmsI	GCATC	1 cut(s)	291
BmtI	GCTAGC	1 cut(s)	69
BsaI	GGTCTC	1 cut(s)	137
Bsc4I	CCNNNNNNNGG	1 cut(s)	319
Bse1I	ACTGG	1 cut(s)	133
Bse3DI	GCAATG	1 cut(s)	22
BseGI	GGATG	1 cut(s)	121
BseLI	CCNNNNNNNGG	1 cut(s)	319
BseMI	GCAATG	1 cut(s)	22
BseNI	ACTGG	1 cut(s)	133
BseXI	GCAGC	2 cut(s)	7, 74
BshFI	GGCC	1 cut(s)	8
BslI	CCNNNNNNNGG	1 cut(s)	319
BsmAI	GTCTC	1 cut(s)	137
BsnI	GGCC	1 cut(s)	8
Bso31I	GGTCTC	1 cut(s)	137
Bsp143I	GATC	4 cut(s)	32, 94, 123, 137
BspACI	CCGC	2 cut(s)	5, 182
BspANI	GGCC	1 cut(s)	8
BspOI	GCTAGC	1 cut(s)	69
BspPI	GGATC	2 cut(s)	89, 132
BspTNI	GGTCTC	1 cut(s)	137
BsrDI	GCAATG	1 cut(s)	22
BsrI	ACTGG	1 cut(s)	133
BssMI	GATC	4 cut(s)	32, 94, 123, 137
BssNAI	GTATAC	1 cut(s)	352
Bst1107I	GTATAC	1 cut(s)	352
BstC8I	GCNNGC	2 cut(s)	67, 105
BstDEI	CTNAG	1 cut(s)	47
BstF5I	GGATG	1 cut(s)	121
BstHHI	GCGC	2 cut(s)	169, 331
BstKTI	GATC	4 cut(s)	35, 97, 126, 140
BstMAI	GTCTC	1 cut(s)	137
BstMBI	GATC	4 cut(s)	32, 94, 123, 137
BstMWI	GCNNNNNNNGC	1 cut(s)	226
BstNSI	RCATGY	1 cut(s)	107
BstV1I	GCAGC	2 cut(s)	7, 74
BstZ17I	GTATAC	1 cut(s)	352
BsuRI	GGCC	1 cut(s)	8
BtsCI	GGATG	1 cut(s)	121
BtsIMutI	CAGTG	1 cut(s)	126
Cac8I	GCNNGC	2 cut(s)	67, 105
CfoI	GCGC	2 cut(s)	169, 331
Cfr13I	GGNCC	1 cut(s)	360
CseI	GACGC	1 cut(s)	235
CviAII	CATG	3 cut(s)	104, 305, 314
CviJI	RGCY	3 cut(s)	8, 65, 69
CviKI_1	RGCY	3 cut(s)	8, 65, 69
DdeI	CTNAG	1 cut(s)	47
DpnI	GATC	4 cut(s)	34, 96, 125, 139
DpnII	GATC	4 cut(s)	32, 94, 123, 137
EciI	GGCGGA	1 cut(s)	197
Eco31I	GGTCTC	1 cut(s)	137
Eco47I	GGWCC	1 cut(s)	360
EcoT22I	ATGCAT	1 cut(s)	105
FaeI	CATG	3 cut(s)	107, 308, 317
FaiI	YATR	9 cut(s)	28, 105, 176, 222, 224, 306, 315, 347, 352
FatI	CATG	3 cut(s)	103, 304, 313
FauNDI	CATATG	1 cut(s)	222
FblI	GTMKAC	1 cut(s)	351
Fnu4HI	GCNGC	3 cut(s)	6, 21, 63
FokI	GGATG	1 cut(s)	128
Fsp4HI	GCNGC	3 cut(s)	6, 21, 63
FspBI	CTAG	1 cut(s)	66
GlaI	GCGC	2 cut(s)	168, 330
GluI	GCNGC	3 cut(s)	6, 21, 63
HaeIII	GGCC	1 cut(s)	8
HgaI	GACGC	1 cut(s)	235
HhaI	GCGC	2 cut(s)	169, 331
Hin1II	CATG	3 cut(s)	107, 308, 317
Hin6I	GCGC	2 cut(s)	167, 329
HinP1I	GCGC	2 cut(s)	167, 329
Hpy166II	GTNNAC	1 cut(s)	352
Hpy188I	TCNGA	2 cut(s)	73, 137
Hpy188III	TCNNGA	3 cut(s)	196, 265, 289
Hpy8I	GTNNAC	1 cut(s)	352
HpyAV	CCTTC	1 cut(s)	35
HpyCH4V	TGCA	2 cut(s)	103, 220
HpyF10VI	GCNNNNNNNGC	1 cut(s)	226
HpyF3I	CTNAG	1 cut(s)	47
Hsp92II	CATG	3 cut(s)	107, 308, 317
HspAI	GCGC	2 cut(s)	167, 329
Kzo9I	GATC	4 cut(s)	32, 94, 123, 137
LmnI	GCTCC	2 cut(s)	28, 296
LpnPI	CCDG	6 cut(s)	72, 114, 209, 231, 250, 302
Lsp1109I	GCAGC	2 cut(s)	7, 74
LweI	GCATC	1 cut(s)	291
MaeI	CTAG	1 cut(s)	66
MalI	GATC	4 cut(s)	34, 96, 125, 139
MboI	GATC	4 cut(s)	32, 94, 123, 137
MboII	GAAGA	2 cut(s)	162, 265
MfeI	CAATTG	1 cut(s)	83
MluCI	AATT	4 cut(s)	83, 191, 203, 333
MnlI	CCTC	2 cut(s)	81, 172
Mph1103I	ATGCAT	1 cut(s)	105
MunI	CAATTG	1 cut(s)	83
MwoI	GCNNNNNNNGC	1 cut(s)	226
NdeI	CATATG	1 cut(s)	222
NdeII	GATC	4 cut(s)	32, 94, 123, 137
NheI	GCTAGC	1 cut(s)	65
NlaIII	CATG	3 cut(s)	107, 308, 317
NsiI	ATGCAT	1 cut(s)	105
NspI	RCATGY	1 cut(s)	107
PaeI	GCATGC	1 cut(s)	107
PflMI	CCANNNNNTGG	1 cut(s)	319
PkrI	GCNGC	3 cut(s)	7, 22, 64
PspPI	GGNCC	1 cut(s)	360
SatI	GCNGC	3 cut(s)	6, 21, 63
Sau3AI	GATC	4 cut(s)	32, 94, 123, 137
Sau96I	GGNCC	1 cut(s)	360
SetI	ASST	5 cut(s)	46, 67, 71, 241, 357
SfaNI	GCATC	1 cut(s)	291
SinI	GGWCC	1 cut(s)	360
SphI	GCATGC	1 cut(s)	107
Sse9I	AATT	4 cut(s)	83, 191, 203, 333
SsiI	CCGC	2 cut(s)	5, 182
SspMI	CTAG	1 cut(s)	66
TasI	AATT	4 cut(s)	83, 191, 203, 333
TauI	GCSGC	1 cut(s)	8
TscAI	CASTG	1 cut(s)	133
TseI	GCWGC	2 cut(s)	20, 62
TspDTI	ATGAA	3 cut(s)	90, 216, 248
TspRI	CASTG	1 cut(s)	133
Van91I	CCANNNNNTGG	1 cut(s)	319
VpaK11BI	GGWCC	1 cut(s)	360
XapI	RAATTY	2 cut(s)	191, 203
XceI	RCATGY	1 cut(s)	107
XmiI	GTMKAC	1 cut(s)	351
XspI	CTAG	1 cut(s)	66
Zsp2I	ATGCAT	1 cut(s)	105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.