AT4G15010

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0013194
Physical Location & Seq
Reverse (-)
8572785 .. 8575340
2556 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15010.3

Sequence Viewer

Length: 1137 bp
ATGGATAAGCTTCTTGAGAATCATCAGTTTGCGACACATGCCATCGCTGCCTCGGCCTCTGTCTCGTTAGGAACTGCTCTCGCTTATCCTTTAGATACCATCAAAACCATTATCCAGGTTGGTTCAGGACCCAATAAGAAATTAAGCTCCTTTCAAGTTTTTAATAGAGTTCTTCGATTCTCTGGCTATTCAGGTCTGTACAGTGGTCTTGGATCGTTAACTTTAGGAAGAATTTCTGGTTTTGGTGCAAGGTTTGGTGTCTATGAGATTCTAACAGCTTTCTACAAAGATGGTCGACATGATAACTACGTGAGTGTTGGTGAAGCTTTTCTGGCTGGTCTGGTGGGAGGTGCAGCAGAAACAGTGATGACTTCTCCATTTGAGCTAATCAAAGTCCGAAAACAAGTGACTGCTGCATCACGGGCTCCAAATGCTTCCGCTGTTGCAGAGACCGCACCGGTCTCACCCATGATCACAAAACTGCTAAGAAGATACACTCTTGATGTAAAGTCATTGACACAAACAGTCAGTCTCTTATCCGTCTTAAATCACAAACACCCAAACATGACAGCTGCTTTGCAAGAGTACCCTTGGATGATGACTGGAACAGGAAACCCACCATCAGCCATGGATGTTAAGAGACCGCTCGATGTTGCATCACTTGAAGGATATAGAGCTTTATGGAGGAATCTACGTTCAGGTCTTATAAGAGATTGTATTTACGGTGGAGTATTCTTTTCAACATGGCAGTTTCTTCACGAGGCAATGGTCGGTTGGAAAGCTGTTGGGATGAATCCTCTGCCCAGTTCTGAAGAAGAAGTTGGACCTTTATCTCCGGTAGCCATTAGCCTTGCTGCTGGGATATCTGGTGCCGTTGCAGCTGCAGCATCACATAGCTTTGACACAGCAAGAACACGTGCACAGTGTGTAATATTGCCAAAGTATACAGCAAAGGAGAGGAAGTTTCTAAAATGGAATAAACCAGGGAAGAGATTAGAGAGATGGACAGGAATCCATCCTACAGACAGAAATCTCTTGTTCCGAGGTATTGGGATGAGGATGGCTCGAAGCTCTGTTGCATCGACTGTGATCGTAGGAAGCTATTACTTAGCTGTCGATTTATTGGTTCCCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

378

Amino Acids

40.99

Weight (kDa)

9.89

Isoelectric Point (pI)

29.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 8 - 96 6.1e-14 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15010 AT4G15010 AT4G15010
fragaria_vesca FvH4_4g29980
malus_domestica MD13G1062400.v1.1 MD16G1060700.v1.1
prunus_persica Prupe.1G287600_v2.0.a1
pyrus_communis pycom13g05480 pycom16g05290
rosa_chinensis RchiOBHm_Chr4g0438261
rosa_laevigata RLG00000006376
rosa_roxburghii Rroxscaffold_5G00379350
rosa_rugosa Rorug04G0308300
rosa_samantha Rh4AG359500 Rh4BG370300 Rh4CG384500
rosa_wichuraiana Rw0G006410 Rw0G016350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 707
AccB1I GGYRCC 1 cut(s) 869
AccBSI CCGCTC 1 cut(s) 646
AccI GTMKAC 2 cut(s) 295, 944
AciI CCGC 3 cut(s) 438, 453, 644
AclWI GGATC 1 cut(s) 220
AcsI RAATTY 1 cut(s) 231
AcuI CTGAAG 1 cut(s) 831
AcvI CACGTG 1 cut(s) 917
AdeI CACNNNGTG 1 cut(s) 926
AfaI GTAC 2 cut(s) 200, 587
AflIII ACRYGT 1 cut(s) 914
AgeI ACCGGT 1 cut(s) 457
AgsI TTSAA 3 cut(s) 155, 665, 741
AjnI CCWGG 2 cut(s) 114, 982
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AloI GAACNNNNNNTCC 2 cut(s) 679, 711
Alw21I GWGCWC 1 cut(s) 922
Alw26I GTCTC 5 cut(s) 67, 443, 466, 536, 634
Alw44I GTGCAC 1 cut(s) 918
AlwI GGATC 1 cut(s) 220
AoxI GGCC 1 cut(s) 54
ApaLI GTGCAC 1 cut(s) 918
ApeKI GCWGC 8 cut(s) 47, 353, 413, 572, 854, 878, 881, 884
ApoI RAATTY 1 cut(s) 231
ArsI GACNNNNNNTTYG 4 cut(s) 514, 546, 559, 591
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 2 cut(s) 232, 327
AspS9I GGNCC 2 cut(s) 128, 824
AsuHPI GGTGA 2 cut(s) 332, 456
AvaII GGWCC 2 cut(s) 128, 824
BaeGI GKGCMC 1 cut(s) 922
BanI GGYRCC 1 cut(s) 869
BanII GRGCYC 1 cut(s) 427
BauI CACGAG 1 cut(s) 758
BbrPI CACGTG 1 cut(s) 917
Bbv12I GWGCWC 1 cut(s) 922
BbvI GCAGC 8 cut(s) 34, 365, 400, 559, 841, 868, 890, 896
BccI CCATC 7 cut(s) 50, 107, 284, 628, 996, 1023, 1054
BceAI ACGGC 1 cut(s) 857
BciT130I CCWGG 2 cut(s) 116, 984
BclI TGATCA 1 cut(s) 471
BcoDI GTCTC 5 cut(s) 67, 443, 466, 536, 634
BfmI CTRYAG 2 cut(s) 882, 1020
BisI GCNGC 8 cut(s) 48, 354, 414, 573, 855, 879, 882, 885
BlsI GCNGC 8 cut(s) 49, 355, 415, 574, 856, 880, 883, 886
Bme1390I CCNGG 2 cut(s) 116, 984
Bme18I GGWCC 2 cut(s) 128, 824
BmgT120I GGNCC 2 cut(s) 128, 824
BmiI GGNNCC 4 cut(s) 130, 426, 871, 1128
BmrFI CCNGG 2 cut(s) 116, 984
BmrI ACTGGG 1 cut(s) 798
BmsI GCATC 4 cut(s) 425, 665, 896, 1088
BmuI ACTGGG 1 cut(s) 798
BplI GAGNNNNNCTC 2 cut(s) 1048, 1080
BpuEI CTTGAG 1 cut(s) 35
BsaAI YACGTR 2 cut(s) 310, 917
BsaI GGTCTC 3 cut(s) 443, 466, 634
BsaJI CCNNGG 5 cut(s) 51, 590, 627, 983, 1042
BsaWI WCCGGW 2 cut(s) 457, 835
BsaXI ACNNNNNCTCC 2 cut(s) 947, 977
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 2 cut(s) 607, 804
Bse3DI GCAATG 1 cut(s) 771
BseBI CCWGG 2 cut(s) 116, 984
BseDI CCNNGG 5 cut(s) 51, 590, 627, 983, 1042
BseGI GGATG 6 cut(s) 600, 637, 795, 1015, 1059, 1065
BseMI GCAATG 1 cut(s) 771
BseNI ACTGG 2 cut(s) 607, 804
BseSI GKGCMC 1 cut(s) 922
BseXI GCAGC 8 cut(s) 34, 365, 400, 559, 841, 868, 890, 896
BseYI CCCAGC 1 cut(s) 857
BsgI GTGCAG 1 cut(s) 372
BshFI GGCC 1 cut(s) 56
BshNI GGYRCC 1 cut(s) 869
BshTI ACCGGT 1 cut(s) 457
BsiHKAI GWGCWC 1 cut(s) 922
BsiSI CCGG 2 cut(s) 458, 836
BsmAI GTCTC 5 cut(s) 67, 443, 466, 536, 634
BsnI GGCC 1 cut(s) 56
Bso31I GGTCTC 3 cut(s) 443, 466, 634
Bsp1286I GDGCHC 2 cut(s) 427, 922
Bsp1407I TGTACA 1 cut(s) 198
Bsp143I GATC 3 cut(s) 212, 471, 1089
Bsp19I CCATGG 1 cut(s) 627
BspACI CCGC 3 cut(s) 438, 453, 644
BspANI GGCC 1 cut(s) 56
BspLI GGNNCC 4 cut(s) 130, 426, 871, 1128
BspMAI CTGCAG 1 cut(s) 886
BspPI GGATC 1 cut(s) 220
BspT107I GGYRCC 1 cut(s) 869
BspTNI GGTCTC 3 cut(s) 443, 466, 634
BsrBI CCGCTC 1 cut(s) 646
BsrDI GCAATG 1 cut(s) 771
BsrFI RCCGGY 1 cut(s) 457
BsrGI TGTACA 1 cut(s) 198
BsrI ACTGG 2 cut(s) 607, 804
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 5 cut(s) 51, 590, 627, 983, 1042
BssMI GATC 3 cut(s) 212, 471, 1089
BssNAI GTATAC 1 cut(s) 945
BssSI CACGAG 1 cut(s) 758
BssT1I CCWWGG 2 cut(s) 590, 627
Bst1107I GTATAC 1 cut(s) 945
Bst2BI CACGAG 1 cut(s) 758
Bst2UI CCWGG 2 cut(s) 116, 984
Bst4CI ACNGT 6 cut(s) 203, 364, 526, 725, 924, 1087
Bst6I CTCTTC 1 cut(s) 983
BstAUI TGTACA 1 cut(s) 198
BstBAI YACGTR 2 cut(s) 310, 917
BstDEI CTNAG 2 cut(s) 485, 1108
BstDSI CCRYGG 1 cut(s) 627
BstF5I GGATG 6 cut(s) 600, 637, 795, 1015, 1059, 1065
BstKTI GATC 3 cut(s) 215, 474, 1092
BstMAI GTCTC 5 cut(s) 67, 443, 466, 536, 634
BstMBI GATC 3 cut(s) 212, 471, 1089
BstMWI GCNNNNNNNGC 9 cut(s) 38, 47, 53, 332, 422, 431, 452, 878, 884
BstNI CCWGG 2 cut(s) 116, 984
BstNSI RCATGY 1 cut(s) 41
BstSCI CCNGG 2 cut(s) 114, 982
BstSFI CTRYAG 2 cut(s) 882, 1020
BstSLI GKGCMC 1 cut(s) 922
BstV1I GCAGC 8 cut(s) 34, 365, 400, 559, 841, 868, 890, 896
BstZ17I GTATAC 1 cut(s) 945
BsuRI GGCC 1 cut(s) 56
BtgI CCRYGG 1 cut(s) 627
BtgZI GCGATG 1 cut(s) 28
BtsCI GGATG 6 cut(s) 600, 637, 795, 1015, 1059, 1065
BtsIMutI CAGTG 3 cut(s) 208, 369, 929
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 2 cut(s) 128, 824
Csp6I GTAC 2 cut(s) 199, 586
CspAI ACCGGT 1 cut(s) 457
CviAII CATG 6 cut(s) 38, 299, 469, 565, 628, 744
CviQI GTAC 2 cut(s) 199, 586
DdeI CTNAG 2 cut(s) 485, 1108
DpnI GATC 3 cut(s) 214, 473, 1091
DpnII GATC 3 cut(s) 212, 471, 1089
DraIII CACNNNGTG 1 cut(s) 926
Eam1104I CTCTTC 1 cut(s) 983
EarI CTCTTC 1 cut(s) 983
Eco130I CCWWGG 2 cut(s) 590, 627
Eco24I GRGCYC 1 cut(s) 427
Eco31I GGTCTC 3 cut(s) 443, 466, 634
Eco32I GATATC 1 cut(s) 864
Eco47I GGWCC 2 cut(s) 128, 824
Eco57I CTGAAG 1 cut(s) 831
Eco72I CACGTG 1 cut(s) 917
EcoO109I RGGNCCY 1 cut(s) 128
EcoRII CCWGG 2 cut(s) 114, 982
EcoRV GATATC 1 cut(s) 864
EcoT14I CCWWGG 2 cut(s) 590, 627
EcoT38I GRGCYC 1 cut(s) 427
ErhI CCWWGG 2 cut(s) 590, 627
FaeI CATG 6 cut(s) 41, 302, 472, 568, 631, 747
FatI CATG 6 cut(s) 37, 298, 468, 564, 627, 743
FbaI TGATCA 1 cut(s) 471
FblI GTMKAC 2 cut(s) 295, 944
Fnu4HI GCNGC 8 cut(s) 48, 354, 414, 573, 855, 879, 882, 885
FokI GGATG 6 cut(s) 607, 644, 802, 1002, 1066, 1072
FriOI GRGCYC 1 cut(s) 427
Fsp4HI GCNGC 8 cut(s) 48, 354, 414, 573, 855, 879, 882, 885
GluI GCNGC 8 cut(s) 48, 354, 414, 573, 855, 879, 882, 885
GsaI CCCAGC 1 cut(s) 861
HaeIII GGCC 1 cut(s) 56
HapII CCGG 2 cut(s) 458, 836
Hin1II CATG 6 cut(s) 41, 302, 472, 568, 631, 747
HincII GTYRAC 2 cut(s) 219, 296
HindII GTYRAC 2 cut(s) 219, 296
HindIII AAGCTT 2 cut(s) 8, 324
HinfI GANTC 6 cut(s) 19, 177, 268, 688, 793, 1011
HpaI GTTAAC 1 cut(s) 219
HpaII CCGG 2 cut(s) 458, 836
HphI GGTGA 2 cut(s) 332, 456
Hpy166II GTNNAC 4 cut(s) 219, 296, 920, 945
Hpy188I TCNGA 3 cut(s) 398, 811, 1043
Hpy188III TCNNGA 4 cut(s) 14, 126, 500, 758
Hpy8I GTNNAC 4 cut(s) 219, 296, 920, 945
HpyAV CCTTC 1 cut(s) 659
HpyCH4III ACNGT 6 cut(s) 203, 364, 526, 725, 924, 1087
HpyCH4IV ACGT 3 cut(s) 309, 694, 916
HpyF10VI GCNNNNNNNGC 9 cut(s) 38, 47, 53, 332, 422, 431, 452, 878, 884
HpyF3I CTNAG 2 cut(s) 485, 1108
HpySE526I ACGT 3 cut(s) 309, 694, 916
Hsp92II CATG 6 cut(s) 41, 302, 472, 568, 631, 747
Ksp22I TGATCA 1 cut(s) 471
KspAI GTTAAC 1 cut(s) 219
Kzo9I GATC 3 cut(s) 212, 471, 1089
LmnI GCTCC 2 cut(s) 152, 430
Lsp1109I GCAGC 8 cut(s) 34, 365, 400, 559, 841, 868, 890, 896
LweI GCATC 4 cut(s) 425, 665, 896, 1088
MaeII ACGT 3 cut(s) 309, 694, 916
MaeIII GTNAC 1 cut(s) 406
MalI GATC 3 cut(s) 214, 473, 1091
MbiI CCGCTC 1 cut(s) 646
MboI GATC 3 cut(s) 212, 471, 1089
MboII GAAGA 7 cut(s) 164, 240, 501, 746, 824, 827, 1000
MhlI GDGCHC 2 cut(s) 427, 922
MluCI AATT 2 cut(s) 140, 231
MmeI TCCRAC 2 cut(s) 755, 802
MnlI CCTC 9 cut(s) 61, 67, 341, 678, 754, 807, 951, 1037, 1050
MroXI GAANNNNTTC 2 cut(s) 232, 327
MseI TTAA 5 cut(s) 143, 162, 218, 545, 636
MspA1I CMGCKG 3 cut(s) 440, 572, 881
MspI CCGG 2 cut(s) 458, 836
MspR9I CCNGG 2 cut(s) 116, 984
MvaI CCWGG 2 cut(s) 116, 984
MwoI GCNNNNNNNGC 9 cut(s) 38, 47, 53, 332, 422, 431, 452, 878, 884
NcoI CCATGG 1 cut(s) 627
NdeII GATC 3 cut(s) 212, 471, 1089
NlaIII CATG 6 cut(s) 41, 302, 472, 568, 631, 747
NlaIV GGNNCC 4 cut(s) 130, 426, 871, 1128
NmeAIII GCCGAG 1 cut(s) 32
NmuCI GTSAC 1 cut(s) 406
NspI RCATGY 1 cut(s) 41
PdmI GAANNNNTTC 2 cut(s) 232, 327
PfeI GAWTC 6 cut(s) 19, 177, 268, 688, 793, 1011
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 8 cut(s) 49, 355, 415, 574, 856, 880, 883, 886
PmaCI CACGTG 1 cut(s) 917
PmlI CACGTG 1 cut(s) 917
Ppu21I YACGTR 2 cut(s) 310, 917
PpuMI RGGWCCY 1 cut(s) 128
PsiI TTATAA 1 cut(s) 707
Psp5II RGGWCCY 1 cut(s) 128
Psp6I CCWGG 2 cut(s) 114, 982
PspCI CACGTG 1 cut(s) 917
PspFI CCCAGC 1 cut(s) 857
PspGI CCWGG 2 cut(s) 114, 982
PspN4I GGNNCC 4 cut(s) 130, 426, 871, 1128
PspPI GGNCC 2 cut(s) 128, 824
PspPPI RGGWCCY 1 cut(s) 128
PstI CTGCAG 1 cut(s) 886
PvuII CAGCTG 2 cut(s) 572, 881
RsaI GTAC 2 cut(s) 200, 587
RsaNI GTAC 2 cut(s) 199, 586
SalI GTCGAC 1 cut(s) 294
SaqAI TTAA 5 cut(s) 143, 162, 218, 545, 636
SatI GCNGC 8 cut(s) 48, 354, 414, 573, 855, 879, 882, 885
Sau3AI GATC 3 cut(s) 212, 471, 1089
Sau96I GGNCC 2 cut(s) 128, 824
ScrFI CCNGG 2 cut(s) 116, 984
SduI GDGCHC 2 cut(s) 427, 922
SfaNI GCATC 4 cut(s) 425, 665, 896, 1088
SfcI CTRYAG 2 cut(s) 882, 1020
SinI GGWCC 2 cut(s) 128, 824
SmlI CTYRAG 1 cut(s) 14
SmoI CTYRAG 1 cut(s) 14
Sse9I AATT 2 cut(s) 140, 231
SsiI CCGC 3 cut(s) 438, 453, 644
SspI AATATT 1 cut(s) 933
StyD4I CCNGG 2 cut(s) 114, 982
StyI CCWWGG 2 cut(s) 590, 627
TaaI ACNGT 6 cut(s) 203, 364, 526, 725, 924, 1087
TaiI ACGT 3 cut(s) 312, 697, 919
TaqI TCGA 6 cut(s) 175, 295, 648, 1066, 1082, 1116
TasI AATT 2 cut(s) 140, 231
TatI WGTACW 1 cut(s) 198
TfiI GAWTC 6 cut(s) 19, 177, 268, 688, 793, 1011
Tru1I TTAA 5 cut(s) 143, 162, 218, 545, 636
Tru9I TTAA 5 cut(s) 143, 162, 218, 545, 636
TscAI CASTG 3 cut(s) 208, 369, 929
TseFI GTSAC 1 cut(s) 406
TseI GCWGC 8 cut(s) 47, 353, 413, 572, 854, 878, 881, 884
Tsp45I GTSAC 1 cut(s) 406
TspDTI ATGAA 1 cut(s) 806
TspGWI ACGGA 1 cut(s) 529
TspRI CASTG 3 cut(s) 208, 369, 929
VneI GTGCAC 1 cut(s) 918
VpaK11BI GGWCC 2 cut(s) 128, 824
XapI RAATTY 1 cut(s) 231
XceI RCATGY 1 cut(s) 41
XmiI GTMKAC 2 cut(s) 295, 944
XmnI GAANNNNTTC 2 cut(s) 232, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.