Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007882

Physical Location & Seq

Genomic Coordinates Reverse (-)

9361952 .. 9366748

Gene Structure 4797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G16630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGCCGTCGAGTTTCTTCTTTGAGGATGCTAGTGACGACGAGCTCGAATTAATACGCAATCAAGAGGACAGTAGTGAGGAAGACGTAAAGGAAGGCGAAGCAGAAGAGCATGAAGCTGGAGAAGACGAAGATGGAGAAGAGGAATATGAAGAAGAAGATGACGACGAAGAAGAAGAAGATGAGAAGCGGAAACGAGATGCTGATGCTCAATCTCCTTGGGATTTTGCATCTTACTCAAGCTCCGTTGGTGAAGAACACGCCCGCCGTCACACAACGTCTATTGATGAAAAGATCTCTAAAGCTATTCAGCATCGTCCAGTTCCCATTTCAATAAATGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGATGCCTCCGATGCTGAAACTGACAAACAAGAGGAGTATCTTTCGGAAGACGATGAGGCAGCTGAGTACAAACCAGAAGATGCTACTCCCAAGCCGTTCTTCTCTACAGTGGATGGAGTTTCATTTCATGCTGATACTTTCATGGAGCTTAATCTCTCTCGTCCATTGCTTCGAGCTTGTGAAACTCTCGGATACAAGAAACCTACTCCGATTCAGGCAGCTTGTATACCTTTAGCACTTACAGGGCGTGATCTTTGTGCCAGTGCCATCACTGGGTCAGGGAAGACTGCTGCATTCGCTTTACCTACTCTTGAGAGGTTGCTGTTCCGTCCCAAGCGGGTCTTTGCTACTAGAGTTCTTATTCTCACTCCGACTAGGGAGTTGGCCGTCCAGATTCACAGTATGATTCAGAATCTTGCACAGTTTACTGATATCAAGTGTGGATTGATTGTAGGAGGGCTTTCTGTAAGGGAGCAAGAGGTGGTTCTGAGGTCTATGCCAGATATTGTTGTGGCGACTCCTGGACGTATGATAGATCATTTGCGTAATTCTATGTCTGTTGATTTGGATGATCTAGCGGTTTTAATCCTTGATGAGGCAGACCGCCTTCTACAGACTGGGTTTGCCACTGAAATCACAGAGCTGGTTCGCTTATGTCCCAAGAGAAGGCAAACAATGCTCTTCTCAGCCACAATGACTGAAGAAGTTAAAGAGCTAGTCAAACTTTCCTTGAACAAACCGTTGCGGCTCTCAGCTGATCCATCAGCTAGAAGGCCACCAGGCTTGACTGAGGAGGTGGTAAGAATACGCAGGACTCGTGAGGCAAATCAGGAAGCTGTTCTTCTATCATTGTGCACAAGGACTTTTAAATCAAAAGTCATTATCTTTAGTGGAACAAAACAAGCTGCACATAGACTGAAAATTTTATTCGGATTAGCTGGCCTCAAAGCAGCTGAGCTTCATGGAAACCTAACTCAAGCACAACGTCTTGATTCTCTGGAGCTTTTCAGAAAGCAGGAGGTCGATTTTCTCATTGCTACCGATGTAGCCGCTCGAGGACTTGACATCATTGGTGTTCAAACAGTTATAAATTATGCTTGTCCTCGGGAAATAGACAGTTATGTTCACAGAGTTGGTAGAACAGCTAGGGCTGGAAGGGAAGGTTATGCTGTAACGTTTGTGACTGATAGTGACCGATCCCTTTTGAAAGTCATTGCAAAGAAGGTGGGTTCAAAGTTGAAGAGCCGAGTCATCCCAGAGCAGTCAATCGTCAAGTGGTCTCAGATAATCGATGAAATGGAAGATCAATATTCCGCTGTTATTTCAGCAGAGAGGGATGAGCGAGCTCTAAGGAAAGCTGAAATGGAATTTGCAAAGGCGGAGAACATGCTTGAGCACAGAGATGAAATATATGCACGCCCAAAAAGGACTTGGTTCATGACAGAGAAGGAGAAGAAGCTCGTGGCACAGGCTGAAAAGGATTCTGCAGGGAACCCTGCTGGAGGCGAACTAGTTAGTGCTGATAGAGCAGAGGACCTCAAGATGAAGGAGAAGAGAAAACGTGAACGCGAGAAGAATCTTCCTAGGAAAAAACGTAGAAAGCTAGAAGCTGCCAGAGAGATGCTAGAAGATAACGAAGGAGAAGAAGAGGAAGAAGACGAAGAAGGAGACGAAAAGAGAGGAAGATCAAGAGGGAAAGACAAGAAAAAACAGGAGACAGATAAGAAGGGATTGACACTAAAGGATCTTGGTTACATGAGAGCAAAAGCGGTGAAAGCAAAACAGAGAGCAATTGATTCCGGTAAGATGGAGAGACCAAAGCCGGACAAGAAACAAAGCCGGAGTAAACCAAGAAACCAGCCTCGTGGTGAAGAGATGAAAGATCTGTTCAAGAGTGATATGGGCGAGAAGAAACAGGGCAGAGGCGGTGCCGCGGCTGCAGCAAAACCTCGGACGAAGTCGAAGAACTCATTCAAGAGCAAAGCCAGATATAAGCGTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

789

Amino Acids

89.35

Weight (kDa)

5.51

Isoelectric Point (pI)

51.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	191 - 361	3.2e-44	DEAD/DEAH box helicase
ResIII	PF04851	206 - 354	4.7e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	402 - 507	4.9e-28	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16630
fragaria_vesca	FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260
malus_domestica	MD01G1061100.v1.1 MD15G1442700.v1.1
prunus_persica	Prupe.1G363600_v2.0.a1 Prupe.3G157600_v2.0.a1
pyrus_communis	pycom15g39060
rosa_chinensis	RchiOBHm_Chr6g0303111
rosa_laevigata	RLG00000011107
rosa_multiflora	Rmu_co8350977.1_g000001 Rmu_sc0003721.1_g000002 Rmu_sc0008911.1_g000005
rosa_roxburghii	Rroxscaffold_7G00165010
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG433100 Rh6BG469600 Rh6CG445400 Rh6DG432200
rosa_wichuraiana	Rw6G037540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1454
AccB1I	GGYRCC	1 cut(s)	2294
AccBSI	CCGCTC	1 cut(s)	1418
AccI	GTMKAC	1 cut(s)	592
AccII	CGCG	2 cut(s)	1935, 2300
AclI	AACGTT	1 cut(s)	1541
AclWI	GGATC	3 cut(s)	1118, 1557, 2118
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	2 cut(s)	1287, 1733
AcuI	CTGAAG	1 cut(s)	1086
AfaI	GTAC	1 cut(s)	434
AfiI	CCNNNNNNNGG	4 cut(s)	639, 961, 1032, 1868
AgsI	TTSAA	8 cut(s)	330, 1099, 1445, 1573, 1599, 1606, 2257, 2341
AhlI	ACTAGT	1 cut(s)	1876
AjnI	CCWGG	2 cut(s)	886, 1144
AjuI	GAANNNNNNNTTGG	2 cut(s)	449, 481
Alw21I	GWGCWC	4 cut(s)	45, 1223, 1714, 1764
Alw26I	GTCTC	4 cut(s)	1650, 2028, 2075, 2173
Alw44I	GTGCAC	1 cut(s)	1219
AlwI	GGATC	3 cut(s)	1118, 1557, 2118
Ama87I	CYCGRG	2 cut(s)	1419, 1470
AoxI	GGCC	3 cut(s)	750, 1139, 1306
ApaLI	GTGCAC	1 cut(s)	1219
ApeKI	GCWGC	8 cut(s)	425, 584, 656, 1271, 1316, 1976, 2303, 2306
ApoI	RAATTY	2 cut(s)	1287, 1733
AseI	ATTAAT	1 cut(s)	50
Asp700I	GAANNNNTTC	2 cut(s)	1203, 2336
AspA2I	CCTAGG	1 cut(s)	1949
AspS9I	GGNCC	1 cut(s)	1900
AsuHPI	GGTGA	3 cut(s)	260, 2149, 2246
AvaI	CYCGRG	2 cut(s)	1419, 1470
AvaII	GGWCC	1 cut(s)	1900
AvrII	CCTAGG	1 cut(s)	1949
BaeGI	GKGCMC	1 cut(s)	1223
BanI	GGYRCC	1 cut(s)	2294
BanII	GRGCYC	2 cut(s)	45, 1714
BauI	CACGAG	3 cut(s)	1182, 1826, 2229
BbsI	GAAGAC	5 cut(s)	87, 129, 420, 656, 2028
Bbv12I	GWGCWC	4 cut(s)	45, 1223, 1714, 1764
BbvI	GCAGC	8 cut(s)	437, 596, 643, 1258, 1328, 1963, 2290, 2318
BccI	CCATC	5 cut(s)	125, 473, 641, 1135, 2167
BceAI	ACGGC	3 cut(s)	249, 445, 737
BciT130I	CCWGG	2 cut(s)	888, 1146
BciVI	GTATCC	1 cut(s)	551
BcoDI	GTCTC	4 cut(s)	1650, 2028, 2075, 2173
BcuI	ACTAGT	1 cut(s)	1876
BfmI	CTRYAG	4 cut(s)	471, 977, 1851, 2304
BfuI	GTATCC	1 cut(s)	551
BglII	AGATCT	2 cut(s)	291, 2248
BlnI	CCTAGG	1 cut(s)	1949
BlpI	GCTNAGC	1 cut(s)	1320
Bme1390I	CCNGG	2 cut(s)	888, 1146
Bme18I	GGWCC	1 cut(s)	1900
BmeT110I	CYCGRG	2 cut(s)	1419, 1470
BmgT120I	GGNCC	1 cut(s)	1900
BmiI	GGNNCC	2 cut(s)	1859, 2296
BmrFI	CCNGG	2 cut(s)	888, 1146
BmrI	ACTGGG	2 cut(s)	648, 993
BmsI	GCATC	9 cut(s)	16, 187, 193, 236, 319, 358, 367, 436, 1977
BmuI	ACTGGG	2 cut(s)	648, 993
BpiI	GAAGAC	5 cut(s)	87, 129, 420, 656, 2028
BpmI	CTGGAG	3 cut(s)	138, 1385, 1887
Bpu1102I	GCTNAGC	1 cut(s)	1320
BpuEI	CTTGAG	5 cut(s)	220, 698, 1326, 1778, 1889
Bsa29I	ATCGAT	1 cut(s)	1656
BsaI	GGTCTC	2 cut(s)	1650, 2173
BsaJI	CCNNGG	5 cut(s)	215, 1469, 1949, 2298, 2315
BsaWI	WCCGGW	1 cut(s)	2165
BsaXI	ACNNNNNCTCC	2 cut(s)	224, 254
Bsc4I	CCNNNNNNNGG	4 cut(s)	639, 961, 1032, 1868
Bse1I	ACTGG	4 cut(s)	317, 627, 643, 988
Bse3DI	GCAATG	3 cut(s)	530, 1398, 1578
BseBI	CCWGG	2 cut(s)	888, 1146
BseCI	ATCGAT	1 cut(s)	1656
BseDI	CCNNGG	5 cut(s)	215, 1469, 1949, 2298, 2315
BseGI	GGATG	5 cut(s)	31, 484, 940, 1617, 1708
BseLI	CCNNNNNNNGG	4 cut(s)	639, 961, 1032, 1868
BseMI	GCAATG	3 cut(s)	530, 1398, 1578
BseMII	CTCAG	7 cut(s)	420, 845, 1065, 1131, 1146, 1311, 1661
BseNI	ACTGG	4 cut(s)	317, 627, 643, 988
BseRI	GAGGAG	2 cut(s)	413, 1172
BseSI	GKGCMC	1 cut(s)	1223
BseXI	GCAGC	8 cut(s)	437, 596, 643, 1258, 1328, 1963, 2290, 2318
BsgI	GTGCAG	1 cut(s)	1257
Bsh1236I	CGCG	2 cut(s)	1935, 2300
BshFI	GGCC	3 cut(s)	752, 1141, 1308
BshNI	GGYRCC	1 cut(s)	2294
BshVI	ATCGAT	1 cut(s)	1656
BsiHKAI	GWGCWC	4 cut(s)	45, 1223, 1714, 1764
BsiHKCI	CYCGRG	2 cut(s)	1419, 1470
BsiSI	CCGG	3 cut(s)	2166, 2189, 2206
BslFI	GGGAC	2 cut(s)	681, 1008
BslI	CCNNNNNNNGG	4 cut(s)	639, 961, 1032, 1868
BsmAI	GTCTC	4 cut(s)	1650, 2028, 2075, 2173
BsmBI	CGTCTC	1 cut(s)	2028
BsmFI	GGGAC	2 cut(s)	681, 1008
BsmI	GAATGC	1 cut(s)	659
BsnI	GGCC	3 cut(s)	752, 1141, 1308
Bso31I	GGTCTC	2 cut(s)	1650, 2173
BsoBI	CYCGRG	2 cut(s)	1419, 1470
Bsp1286I	GDGCHC	4 cut(s)	45, 1223, 1714, 1764
Bsp1720I	GCTNAGC	1 cut(s)	1320
BspANI	GGCC	3 cut(s)	752, 1141, 1308
BspCNI	CTCAG	7 cut(s)	421, 846, 1064, 1130, 1147, 1312, 1660
BspDI	ATCGAT	1 cut(s)	1656
BspFNI	CGCG	2 cut(s)	1935, 2300
BspHI	TCATGA	1 cut(s)	1803
BspLI	GGNNCC	2 cut(s)	1859, 2296
BspMAI	CTGCAG	2 cut(s)	1855, 2308
BspPI	GGATC	3 cut(s)	1118, 1557, 2118
BspQI	GCTCTTC	3 cut(s)	99, 1052, 1601
BspT107I	GGYRCC	1 cut(s)	2294
BspTNI	GGTCTC	2 cut(s)	1650, 2173
BsrBI	CCGCTC	1 cut(s)	1418
BsrDI	GCAATG	3 cut(s)	530, 1398, 1578
BsrI	ACTGG	4 cut(s)	317, 627, 643, 988
BssECI	CCNNGG	5 cut(s)	215, 1469, 1949, 2298, 2315
BssNAI	GTATAC	1 cut(s)	593
BssSI	CACGAG	3 cut(s)	1182, 1826, 2229
BssT1I	CCWWGG	2 cut(s)	215, 1949
Bst1107I	GTATAC	1 cut(s)	593
Bst2BI	CACGAG	3 cut(s)	1182, 1826, 2229
Bst2UI	CCWGG	2 cut(s)	888, 1146
Bst4CI	ACNGT	7 cut(s)	71, 475, 767, 789, 1107, 1450, 1484
Bst6I	CTCTTC	8 cut(s)	99, 132, 342, 1052, 1601, 1913, 2007, 2232
BstAPI	GCANNNNNTGC	1 cut(s)	1042
BstC8I	GCNNGC	4 cut(s)	262, 1306, 1710, 1783
BstDEI	CTNAG	8 cut(s)	429, 854, 1051, 1117, 1155, 1320, 1647, 1715
BstDSI	CCRYGG	1 cut(s)	2298
BstENI	CCTNNNNNAGG	2 cut(s)	959, 1866
BstF5I	GGATG	5 cut(s)	31, 484, 940, 1617, 1708
BstFNI	CGCG	2 cut(s)	1935, 2300
BstMAI	GTCTC	4 cut(s)	1650, 2028, 2075, 2173
BstMWI	GCNNNNNNNGC	7 cut(s)	377, 662, 1042, 1892, 2141, 2303, 2306
BstNI	CCWGG	2 cut(s)	888, 1146
BstNSI	RCATGY	1 cut(s)	1756
BstSCI	CCNGG	2 cut(s)	886, 1144
BstSFI	CTRYAG	4 cut(s)	471, 977, 1851, 2304
BstSLI	GKGCMC	1 cut(s)	1223
BstUI	CGCG	2 cut(s)	1935, 2300
BstV1I	GCAGC	8 cut(s)	437, 596, 643, 1258, 1328, 1963, 2290, 2318
BstV2I	GAAGAC	5 cut(s)	87, 129, 420, 656, 2028
BstX2I	RGATCY	3 cut(s)	291, 2110, 2248
BstXI	CCANNNNNNTGG	1 cut(s)	2231
BstYI	RGATCY	3 cut(s)	291, 2110, 2248
BstZ17I	GTATAC	1 cut(s)	593
Bsu15I	ATCGAT	1 cut(s)	1656
BsuI	GTATCC	1 cut(s)	551
BsuRI	GGCC	3 cut(s)	752, 1141, 1308
BsuTUI	ATCGAT	1 cut(s)	1656
BtgI	CCRYGG	1 cut(s)	2298
BtsCI	GGATG	5 cut(s)	31, 484, 940, 1617, 1708
BtsIMutI	CAGTG	4 cut(s)	480, 634, 636, 993
Cac8I	GCNNGC	4 cut(s)	262, 1306, 1710, 1783
CciI	TCATGA	1 cut(s)	1803
Cfr13I	GGNCC	1 cut(s)	1900
Cfr42I	CCGCGG	1 cut(s)	2301
ClaI	ATCGAT	1 cut(s)	1656
Csp6I	GTAC	1 cut(s)	433
CspCI	CAANNNNNGTGG	4 cut(s)	1131, 1166, 1572, 1607
CviAII	CATG	7 cut(s)	110, 494, 508, 1328, 1753, 1804, 2122
CviQI	GTAC	1 cut(s)	433
DdeI	CTNAG	8 cut(s)	429, 854, 1051, 1117, 1155, 1320, 1647, 1715
DraI	TTTAAA	1 cut(s)	1234
EaeI	YGGCCR	1 cut(s)	750
Eam1104I	CTCTTC	8 cut(s)	99, 132, 342, 1052, 1601, 1913, 2007, 2232
EarI	CTCTTC	8 cut(s)	99, 132, 342, 1052, 1601, 1913, 2007, 2232
EciI	GGCGGA	1 cut(s)	1760
Ecl136II	GAGCTC	2 cut(s)	43, 1712
Eco130I	CCWWGG	2 cut(s)	215, 1949
Eco24I	GRGCYC	2 cut(s)	45, 1714
Eco31I	GGTCTC	2 cut(s)	1650, 2173
Eco32I	GATATC	1 cut(s)	799
Eco47I	GGWCC	1 cut(s)	1900
Eco53kI	GAGCTC	2 cut(s)	43, 1712
Eco57I	CTGAAG	1 cut(s)	1086
Eco88I	CYCGRG	2 cut(s)	1419, 1470
EcoICRI	GAGCTC	2 cut(s)	43, 1712
EcoNI	CCTNNNNNAGG	2 cut(s)	959, 1866
EcoO109I	RGGNCCY	1 cut(s)	1900
EcoRII	CCWGG	2 cut(s)	886, 1144
EcoRV	GATATC	1 cut(s)	799
EcoT14I	CCWWGG	2 cut(s)	215, 1949
EcoT38I	GRGCYC	2 cut(s)	45, 1714
ErhI	CCWWGG	2 cut(s)	215, 1949
Esp3I	CGTCTC	1 cut(s)	2028
FaeI	CATG	7 cut(s)	113, 497, 511, 1331, 1756, 1807, 2125
FalI	AAGNNNNNCTT	6 cut(s)	449, 481, 692, 724, 1191, 1223
FaqI	GGGAC	2 cut(s)	681, 1008
FatI	CATG	7 cut(s)	109, 493, 507, 1327, 1752, 1803, 2121
FauI	CCCGC	2 cut(s)	269, 696
FblI	GTMKAC	1 cut(s)	592
FokI	GGATG	5 cut(s)	38, 491, 947, 1604, 1715
FriOI	GRGCYC	2 cut(s)	45, 1714
GsuI	CTGGAG	3 cut(s)	138, 1385, 1887
HaeIII	GGCC	3 cut(s)	752, 1141, 1308
HapII	CCGG	3 cut(s)	2166, 2189, 2206
Hin1II	CATG	7 cut(s)	113, 497, 511, 1331, 1756, 1807, 2125
HpaII	CCGG	3 cut(s)	2166, 2189, 2206
HphI	GGTGA	3 cut(s)	260, 2149, 2246
Hpy166II	GTNNAC	6 cut(s)	593, 792, 1221, 1492, 1931, 2213
Hpy8I	GTNNAC	6 cut(s)	593, 792, 1221, 1492, 1931, 2213
Hpy99I	CGWCG	3 cut(s)	10, 41, 167
HpyCH4III	ACNGT	7 cut(s)	71, 475, 767, 789, 1107, 1450, 1484
HpyCH4IV	ACGT	7 cut(s)	84, 275, 892, 1351, 1541, 1927, 1960
HpyF10VI	GCNNNNNNNGC	7 cut(s)	377, 662, 1042, 1892, 2141, 2303, 2306
HpyF3I	CTNAG	8 cut(s)	429, 854, 1051, 1117, 1155, 1320, 1647, 1715
HpySE526I	ACGT	7 cut(s)	84, 275, 892, 1351, 1541, 1927, 1960
Hsp92II	CATG	7 cut(s)	113, 497, 511, 1331, 1756, 1807, 2125
KspI	CCGCGG	1 cut(s)	2301
LguI	GCTCTTC	3 cut(s)	99, 1052, 1601
LmnI	GCTCC	4 cut(s)	245, 511, 838, 1366
Lsp1109I	GCAGC	8 cut(s)	437, 596, 643, 1258, 1328, 1963, 2290, 2318
LweI	GCATC	9 cut(s)	16, 187, 193, 236, 319, 358, 367, 436, 1977
MaeII	ACGT	7 cut(s)	84, 275, 892, 1351, 1541, 1927, 1960
MaeIII	GTNAC	6 cut(s)	32, 266, 1537, 1546, 1556, 2117
MbiI	CCGCTC	1 cut(s)	1418
MfeI	CAATTG	1 cut(s)	2157
MflI	RGATCY	3 cut(s)	291, 2110, 2248
MhlI	GDGCHC	4 cut(s)	45, 1223, 1714, 1764
MluCI	AATT	6 cut(s)	47, 913, 1287, 1456, 1733, 2157
MlyI	GAGTC	3 cut(s)	877, 1174, 1623
MmeI	TCCRAC	1 cut(s)	761
MroXI	GAANNNNTTC	2 cut(s)	1203, 2336
MseI	TTAA	5 cut(s)	50, 516, 950, 1074, 1233
MslI	CAYNNNNRTG	1 cut(s)	1767
MspA1I	CMGCKG	5 cut(s)	428, 1121, 1319, 1682, 2300
MspI	CCGG	3 cut(s)	2166, 2189, 2206
MspR9I	CCNGG	2 cut(s)	888, 1146
MunI	CAATTG	1 cut(s)	2157
Mva1269I	GAATGC	1 cut(s)	659
MvaI	CCWGG	2 cut(s)	888, 1146
MvnI	CGCG	2 cut(s)	1935, 2300
MwoI	GCNNNNNNNGC	7 cut(s)	377, 662, 1042, 1892, 2141, 2303, 2306
NlaIII	CATG	7 cut(s)	113, 497, 511, 1331, 1756, 1807, 2125
NlaIV	GGNNCC	2 cut(s)	1859, 2296
NmeAIII	GCCGAG	1 cut(s)	1637
NmuCI	GTSAC	4 cut(s)	32, 266, 1546, 1556
NspI	RCATGY	1 cut(s)	1756
PaeR7I	CTCGAG	1 cut(s)	1419
PagI	TCATGA	1 cut(s)	1803
PciSI	GCTCTTC	3 cut(s)	99, 1052, 1601
PcsI	WCGNNNNNNNCGW	2 cut(s)	42, 1180
PctI	GAATGC	1 cut(s)	659
PdmI	GAANNNNTTC	2 cut(s)	1203, 2336
PfeI	GAWTC	8 cut(s)	577, 760, 772, 778, 1358, 1847, 1942, 2162
PflFI	GACNNNGTC	1 cut(s)	2323
PfoI	TCCNGGA	1 cut(s)	886
PleI	GAGTC	3 cut(s)	877, 1174, 1622
PpsI	GAGTC	3 cut(s)	877, 1174, 1622
PpuMI	RGGWCCY	1 cut(s)	1900
PshBI	ATTAAT	1 cut(s)	50
PsiI	TTATAA	1 cut(s)	1454
Psp124BI	GAGCTC	2 cut(s)	45, 1714
Psp1406I	AACGTT	1 cut(s)	1541
Psp5II	RGGWCCY	1 cut(s)	1900
Psp6I	CCWGG	2 cut(s)	886, 1144
PspGI	CCWGG	2 cut(s)	886, 1144
PspN4I	GGNNCC	2 cut(s)	1859, 2296
PspPI	GGNCC	1 cut(s)	1900
PspPPI	RGGWCCY	1 cut(s)	1900
PspXI	VCTCGAGB	1 cut(s)	1419
PstI	CTGCAG	2 cut(s)	1855, 2308
PsuI	RGATCY	3 cut(s)	291, 2110, 2248
PsyI	GACNNNGTC	1 cut(s)	2323
PvuII	CAGCTG	3 cut(s)	428, 1121, 1319
RsaI	GTAC	1 cut(s)	434
RsaNI	GTAC	1 cut(s)	433
RseI	CAYNNNNRTG	1 cut(s)	1767
SacI	GAGCTC	2 cut(s)	45, 1714
SacII	CCGCGG	1 cut(s)	2301
SapI	GCTCTTC	3 cut(s)	99, 1052, 1601
SaqAI	TTAA	5 cut(s)	50, 516, 950, 1074, 1233
Sau96I	GGNCC	1 cut(s)	1900
SchI	GAGTC	3 cut(s)	877, 1174, 1623
ScrFI	CCNGG	2 cut(s)	888, 1146
SduI	GDGCHC	4 cut(s)	45, 1223, 1714, 1764
SfaNI	GCATC	9 cut(s)	16, 187, 193, 236, 319, 358, 367, 436, 1977
SfcI	CTRYAG	4 cut(s)	471, 977, 1851, 2304
Sfr274I	CTCGAG	1 cut(s)	1419
Sfr303I	CCGCGG	1 cut(s)	2301
SgrBI	CCGCGG	1 cut(s)	2301
SinI	GGWCC	1 cut(s)	1900
SlaI	CTCGAG	1 cut(s)	1419
SmiMI	CAYNNNNRTG	1 cut(s)	1767
SmlI	CTYRAG	6 cut(s)	235, 677, 1341, 1419, 1757, 1904
SmoI	CTYRAG	6 cut(s)	235, 677, 1341, 1419, 1757, 1904
SpeI	ACTAGT	1 cut(s)	1876
Sse9I	AATT	6 cut(s)	47, 913, 1287, 1456, 1733, 2157
SspI	AATATT	1 cut(s)	1676
SstI	GAGCTC	2 cut(s)	45, 1714
StyD4I	CCNGG	2 cut(s)	886, 1144
StyI	CCWWGG	2 cut(s)	215, 1949
TaaI	ACNGT	7 cut(s)	71, 475, 767, 789, 1107, 1450, 1484
TaiI	ACGT	7 cut(s)	87, 278, 895, 1354, 1544, 1930, 1963
TaqI	TCGA	7 cut(s)	8, 45, 538, 1389, 1420, 1656, 2327
TaqII	GACCGA	1 cut(s)	1575
TasI	AATT	6 cut(s)	47, 913, 1287, 1456, 1733, 2157
TatI	WGTACW	1 cut(s)	432
TauI	GCSGC	4 cut(s)	1114, 1418, 2300, 2303
TfiI	GAWTC	8 cut(s)	577, 760, 772, 778, 1358, 1847, 1942, 2162
Tru1I	TTAA	5 cut(s)	50, 516, 950, 1074, 1233
Tru9I	TTAA	5 cut(s)	50, 516, 950, 1074, 1233
TscAI	CASTG	4 cut(s)	480, 634, 643, 1000
TseFI	GTSAC	4 cut(s)	32, 266, 1546, 1556
TseI	GCWGC	8 cut(s)	425, 584, 656, 1271, 1316, 1976, 2303, 2306
Tsp45I	GTSAC	4 cut(s)	32, 266, 1546, 1556
TspGWI	ACGGA	2 cut(s)	232, 683
TspRI	CASTG	4 cut(s)	480, 634, 643, 1000
Tth111I	GACNNNGTC	1 cut(s)	2323
VneI	GTGCAC	1 cut(s)	1219
VpaK11BI	GGWCC	1 cut(s)	1900
VspI	ATTAAT	1 cut(s)	50
XagI	CCTNNNNNAGG	2 cut(s)	959, 1866
XapI	RAATTY	2 cut(s)	1287, 1733
XceI	RCATGY	1 cut(s)	1756
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1794
XhoI	CTCGAG	1 cut(s)	1419
XmaJI	CCTAGG	1 cut(s)	1949
XmiI	GTMKAC	1 cut(s)	592
XmnI	GAANNNNTTC	2 cut(s)	1203, 2336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.