Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007882

Physical Location & Seq

Genomic Coordinates Forward (+)

54287278 .. 54292238

Gene Structure 4961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1442700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGCTGCCGCTTTCGTATTTGAGCCCCCAAGTGACGAAGAATATTCCGACGCCGAAGAACAACAACCGCAGGAGGAGGAGGAAGAAGATGAACACGAAGAAGACGAAGAAGCCCTGAAACCCTCGCGAGCTTCTCGCCACTCTGAGTCCCCGTGGGACTTCGCTTCCTACTCCGAAACAGTCGCCCAAGAACATGCTCGCCGGAGCACCACCTCCGTCGATTTCAAGATCTCCAAAGCCCTGCAGCAACGATCAGTCCCCGGTGCCGTTGCCCACGACGATGATGGTAGCTCCGAATCCCAATCCGAATCCGAACCCGAATCCGACAAACAGGAAGATTATAAGCCGGAAGATGATGAAGTAGTTGATGATGCCACTAATGCCGGTGTTGGTAAAAAGCCATTTTTCTCCCCATCAGATGGAACCTCCTTTCATGCAAACTCGTTCATGGAGCTCCATTTGTCTCGCCCTTTGCTTCGGGCGTGTGAGAAACTGGGTTATACCAAGCCCACTCCTATTCAGGCGGCGTGCATACCATTAGCTCTGAGTGGGCGGGATATATGTGGGAGTGCCATTACTGGTTCTGGCAAGACTGCTGCTTTTGCGTTACCTACTCTAGAAAGACTATTGTTTCGTCCAAAGCGGGTGCCCGCTATTAGGGTCCTCGTTCTCACCCCAGCCAGAGAACTGGCGGTTCAGGTTCATAGTATGATTCAGAAACTTGCCCAGTTTACTGATATCAGATGCTGCCTGGTTGTTGGAGGGCTTTCATTAAAGGCACAAGAGGCAGACTTGAGAACAATGCCAGACATTGTTGTGGCTACTCCAGGACGCATAATCGATCATTTACGCAATTCAATGTCTGTGGATTTGGATGATCTTGCTGTTCTAATTCTTGACGAGGCAGATCGCCTTTTGGAGGTTGGATTTAGTGCTGAGATTCGTGAGCTGATTCGTGTATGCCCCAAAAGGAGACAAACCATGCTATTTTCAGCTACAATGACTGAAGAAGTTGACGAGCTTGTCAAGCTTTCTCTAACCAAACCATTACGCCTCTCGGCTGACCCATCTGCGAAACGGCCAGTCACACTAACAGAAGAAGTGGTTAGGATACGACGGATGCGTGAAGTAAATCAGGAAGCAGTTCTACTTGCATTATGTTCAAAGACATTCACAGCCAGAGTGATCATATTCAGTGGCACAAAACAGGCTGCACATAGGTTGAAGATTTTGTTTGGGTTAGCTGGGCTTAAAGCTGCTGAGCTTCATGGCAACCTTACACAAGTCCAGCGTCTAGATGCTTTGGAACTTTTCAGGAAGCAGGGAGTTGACTATTTGATTGCAACTGATGTGGCTGCTCGTAACTTTGGACTTGACATCATTGGTGTTCAAACAGTTATAAATTATGCATGTCCTCGTGACCTTACAAGCTATGTTCATAGAGTGGGTCGTACAGCAAGAGCAGGCAGAGAAGGATATGCCGTTACTTTCGTGACAGATAATGACCGATCTCTTTTAAAAGCCATTGCAAAAAGAGCTGGTTCAAAGTTGAGGAGTCGAATTGTTGCAGAGCAATCAATTACTAAGTGGTGTCAGATTATTGAGGAAATGGAAGATCAAGTGGCCACAATTCTTCAAGAAGAGAGGGAAGAACAAGCACTAAGAAAAGCTGAAATGGAAGCATCGAAGGCTGAGAATATGATTGTGCACAAAGATGAAATTTATTCACGCCCCAAAAGAACCTGGTTTGTAACAGAAAAGGAAAAAAGGATGGTAGTGAATGCAGATAAGTGCGATCTTTTATGCCAAAAGTTTGATGCCCAGAAGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

611

Amino Acids

68.14

Weight (kDa)

5.45

Isoelectric Point (pI)

50.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	171 - 341	6e-46	DEAD/DEAH box helicase
Helicase_C	PF00271	382 - 489	2.5e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16630
fragaria_vesca	FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260
malus_domestica	MD01G1061100.v1.1 MD15G1442700.v1.1
prunus_persica	Prupe.1G363600_v2.0.a1 Prupe.3G157600_v2.0.a1
pyrus_communis	pycom15g39060
rosa_chinensis	RchiOBHm_Chr6g0303111
rosa_laevigata	RLG00000011107
rosa_multiflora	Rmu_co8350977.1_g000001 Rmu_sc0003721.1_g000002 Rmu_sc0008911.1_g000005
rosa_roxburghii	Rroxscaffold_7G00165010
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG433100 Rh6BG469600 Rh6CG445400 Rh6DG432200
rosa_wichuraiana	Rw6G037540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	342, 1400
AasI	GACNNNNNNGTC	1 cut(s)	1022
AccB1I	GGYRCC	2 cut(s)	263, 646
AccB7I	CCANNNNNTGG	1 cut(s)	419
AccII	CGCG	1 cut(s)	127
AciI	CCGC	7 cut(s)	9, 68, 524, 553, 643, 651, 692
AcoI	YGGCCR	2 cut(s)	1079, 1623
AcsI	RAATTY	1 cut(s)	1719
AcuI	CTGAAG	1 cut(s)	1026
AcyI	GRCGYC	1 cut(s)	51
AfaI	GTAC	1 cut(s)	1453
AfiI	CCNNNNNNNGG	3 cut(s)	419, 657, 919
AgsI	TTSAA	7 cut(s)	226, 858, 1164, 1225, 1391, 1545, 1637
AjnI	CCWGG	3 cut(s)	750, 826, 1742
Alw21I	GWGCWC	3 cut(s)	209, 456, 1710
Alw26I	GTCTC	2 cut(s)	468, 967
Alw44I	GTGCAC	1 cut(s)	1706
AlwNI	CAGNNNCTG	2 cut(s)	747, 1828
AoxI	GGCC	2 cut(s)	1079, 1623
ApaLI	GTGCAC	1 cut(s)	1706
ApeKI	GCWGC	7 cut(s)	5, 244, 596, 747, 1211, 1256, 1355
ApoI	RAATTY	1 cut(s)	1719
ArsI	GACNNNNNNTTYG	2 cut(s)	615, 647
Asp700I	GAANNNNTTC	1 cut(s)	1143
AspS9I	GGNCC	1 cut(s)	661
AsuC2I	CCSGG	1 cut(s)	261
AsuHPI	GGTGA	1 cut(s)	664
AvaII	GGWCC	1 cut(s)	661
BaeGI	GKGCMC	2 cut(s)	651, 1710
BalI	TGGCCA	1 cut(s)	1625
BanI	GGYRCC	2 cut(s)	263, 646
BanII	GRGCYC	2 cut(s)	27, 456
BarI	GAAGNNNNNNTAC	2 cut(s)	1131, 1163
BauI	CACGAG	1 cut(s)	1416
BbsI	GAAGAC	1 cut(s)	108
Bbv12I	GWGCWC	3 cut(s)	209, 456, 1710
BbvI	GCAGC	6 cut(s)	256, 583, 734, 1198, 1243, 1342
BccI	CCATC	5 cut(s)	278, 413, 421, 1075, 1765
BceAI	ACGGC	3 cut(s)	251, 1094, 1466
BciT130I	CCWGG	3 cut(s)	752, 828, 1744
BciVI	GTATCC	1 cut(s)	1104
BclI	TGATCA	1 cut(s)	1185
BcnI	CCSGG	1 cut(s)	261
BcoDI	GTCTC	2 cut(s)	468, 967
BfaI	CTAG	2 cut(s)	617, 1295
BfmI	CTRYAG	1 cut(s)	242
BfuI	GTATCC	1 cut(s)	1104
BglII	AGATCT	1 cut(s)	228
BisI	GCNGC	9 cut(s)	6, 9, 245, 525, 597, 748, 1212, 1257, 1356
BlpI	GCTNAGC	1 cut(s)	1260
BlsI	GCNGC	9 cut(s)	7, 10, 246, 526, 598, 749, 1213, 1258, 1357
Bme1390I	CCNGG	4 cut(s)	261, 752, 828, 1744
Bme18I	GGWCC	1 cut(s)	661
BmgT120I	GGNCC	1 cut(s)	661
BmiI	GGNNCC	4 cut(s)	265, 424, 648, 662
BmrFI	CCNGG	4 cut(s)	261, 752, 828, 1744
BmrI	ACTGGG	2 cut(s)	503, 721
BmsI	GCATC	6 cut(s)	361, 734, 1110, 1288, 1691, 1807
BmuI	ACTGGG	2 cut(s)	503, 721
BpiI	GAAGAC	1 cut(s)	108
BpmI	CTGGAG	1 cut(s)	810
Bpu1102I	GCTNAGC	1 cut(s)	1260
BpuEI	CTTGAG	1 cut(s)	814
BpuMI	CCSGG	1 cut(s)	261
Bsa29I	ATCGAT	1 cut(s)	840
BsaHI	GRCGYC	1 cut(s)	51
BsaJI	CCNNGG	2 cut(s)	152, 259
Bsc4I	CCNNNNNNNGG	3 cut(s)	419, 657, 919
Bse118I	RCCGGY	1 cut(s)	383
Bse1I	ACTGG	5 cut(s)	498, 583, 693, 727, 1082
Bse3DI	GCAATG	1 cut(s)	1524
BseBI	CCWGG	3 cut(s)	752, 828, 1744
BseCI	ATCGAT	1 cut(s)	840
BseDI	CCNNGG	2 cut(s)	152, 259
BseGI	GGATG	3 cut(s)	880, 1125, 1776
BseLI	CCNNNNNNNGG	3 cut(s)	419, 657, 919
BseMI	GCAATG	1 cut(s)	1524
BseMII	CTCAG	5 cut(s)	135, 536, 927, 1251, 1683
BseNI	ACTGG	5 cut(s)	498, 583, 693, 727, 1082
BseRI	GAGGAG	3 cut(s)	89, 92, 1567
BseSI	GKGCMC	2 cut(s)	651, 1710
BseXI	GCAGC	6 cut(s)	256, 583, 734, 1198, 1243, 1342
BseYI	CCCAGC	2 cut(s)	676, 1244
BsgI	GTGCAG	1 cut(s)	1197
Bsh1236I	CGCG	1 cut(s)	127
BshFI	GGCC	2 cut(s)	1081, 1625
BshNI	GGYRCC	2 cut(s)	263, 646
BshVI	ATCGAT	1 cut(s)	840
BsiHKAI	GWGCWC	3 cut(s)	209, 456, 1710
BsiSI	CCGG	4 cut(s)	202, 261, 347, 384
BslFI	GGGAC	3 cut(s)	133, 170, 242
BslI	CCNNNNNNNGG	3 cut(s)	419, 657, 919
BsmAI	GTCTC	2 cut(s)	468, 967
BsmFI	GGGAC	3 cut(s)	133, 170, 242
BsmI	GAATGC	1 cut(s)	1786
BsnI	GGCC	2 cut(s)	1081, 1625
Bsp1286I	GDGCHC	5 cut(s)	27, 209, 456, 651, 1710
Bsp143I	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
Bsp1720I	GCTNAGC	1 cut(s)	1260
Bsp68I	TCGCGA	1 cut(s)	127
BspACI	CCGC	7 cut(s)	9, 68, 524, 553, 643, 651, 692
BspANI	GGCC	2 cut(s)	1081, 1625
BspCNI	CTCAG	5 cut(s)	136, 537, 928, 1252, 1684
BspDI	ATCGAT	1 cut(s)	840
BspFNI	CGCG	1 cut(s)	127
BspLI	GGNNCC	4 cut(s)	265, 424, 648, 662
BspMAI	CTGCAG	1 cut(s)	246
BspT107I	GGYRCC	2 cut(s)	263, 646
BsrDI	GCAATG	1 cut(s)	1524
BsrFI	RCCGGY	1 cut(s)	383
BsrI	ACTGG	5 cut(s)	498, 583, 693, 727, 1082
BssAI	RCCGGY	1 cut(s)	383
BssECI	CCNNGG	2 cut(s)	152, 259
BssMI	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
BssNI	GRCGYC	1 cut(s)	51
BssSI	CACGAG	1 cut(s)	1416
Bst2BI	CACGAG	1 cut(s)	1416
Bst2UI	CCWGG	3 cut(s)	752, 828, 1744
Bst4CI	ACNGT	2 cut(s)	181, 1396
Bst6I	CTCTTC	1 cut(s)	1635
BstACI	GRCGYC	1 cut(s)	51
BstC8I	GCNNGC	5 cut(s)	129, 199, 529, 651, 1465
BstDEI	CTNAG	7 cut(s)	144, 545, 936, 1260, 1584, 1661, 1692
BstDSI	CCRYGG	1 cut(s)	152
BstENI	CCTNNNNNAGG	1 cut(s)	917
BstF5I	GGATG	3 cut(s)	880, 1125, 1776
BstFNI	CGCG	1 cut(s)	127
BstKTI	GATC	9 cut(s)	231, 254, 844, 880, 910, 1188, 1511, 1618, 1798
BstMAI	GTCTC	2 cut(s)	468, 967
BstMBI	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
BstMWI	GCNNNNNNNGC	6 cut(s)	380, 602, 785, 1027, 1535, 1688
BstNI	CCWGG	3 cut(s)	752, 828, 1744
BstNSI	RCATGY	2 cut(s)	197, 1413
BstSCI	CCNGG	4 cut(s)	259, 750, 826, 1742
BstSFI	CTRYAG	1 cut(s)	242
BstSLI	GKGCMC	2 cut(s)	651, 1710
BstUI	CGCG	1 cut(s)	127
BstV1I	GCAGC	6 cut(s)	256, 583, 734, 1198, 1243, 1342
BstV2I	GAAGAC	1 cut(s)	108
BstX2I	RGATCY	1 cut(s)	228
BstXI	CCANNNNNNTGG	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	228
Bsu15I	ATCGAT	1 cut(s)	840
BsuI	GTATCC	1 cut(s)	1104
BsuRI	GGCC	2 cut(s)	1081, 1625
BsuTUI	ATCGAT	1 cut(s)	840
BtgI	CCRYGG	1 cut(s)	152
BtsCI	GGATG	3 cut(s)	880, 1125, 1776
BtsIMutI	CAGTG	1 cut(s)	1201
BtuMI	TCGCGA	1 cut(s)	127
Cac8I	GCNNGC	5 cut(s)	129, 199, 529, 651, 1465
CaiI	CAGNNNCTG	2 cut(s)	747, 1828
Cfr10I	RCCGGY	1 cut(s)	383
Cfr13I	GGNCC	1 cut(s)	661
ClaI	ATCGAT	1 cut(s)	840
CseI	GACGC	3 cut(s)	59, 840, 1280
CsiI	ACCWGGT	1 cut(s)	1742
Csp6I	GTAC	1 cut(s)	1452
CspCI	CAANNNNNGTGG	4 cut(s)	846, 881, 1332, 1367
CviAII	CATG	6 cut(s)	194, 434, 448, 982, 1268, 1410
CviQI	GTAC	1 cut(s)	1452
DdeI	CTNAG	7 cut(s)	144, 545, 936, 1260, 1584, 1661, 1692
DpnI	GATC	9 cut(s)	230, 253, 843, 879, 909, 1187, 1510, 1617, 1797
DpnII	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
DraI	TTTAAA	1 cut(s)	1518
DrdI	GACNNNNNNGTC	1 cut(s)	1022
DseDI	GACNNNNNNGTC	1 cut(s)	1022
EaeI	YGGCCR	2 cut(s)	1079, 1623
Eam1104I	CTCTTC	1 cut(s)	1635
EarI	CTCTTC	1 cut(s)	1635
Ecl136II	GAGCTC	1 cut(s)	454
Eco24I	GRGCYC	2 cut(s)	27, 456
Eco32I	GATATC	1 cut(s)	739
Eco47I	GGWCC	1 cut(s)	661
Eco53kI	GAGCTC	1 cut(s)	454
Eco57I	CTGAAG	1 cut(s)	1026
EcoICRI	GAGCTC	1 cut(s)	454
EcoNI	CCTNNNNNAGG	1 cut(s)	917
EcoO109I	RGGNCCY	1 cut(s)	661
EcoRII	CCWGG	3 cut(s)	750, 826, 1742
EcoRV	GATATC	1 cut(s)	739
EcoT22I	ATGCAT	1 cut(s)	1411
EcoT38I	GRGCYC	2 cut(s)	27, 456
FaeI	CATG	6 cut(s)	197, 437, 451, 985, 1271, 1413
FaqI	GGGAC	3 cut(s)	133, 170, 242
FatI	CATG	6 cut(s)	193, 433, 447, 981, 1267, 1409
FauI	CCCGC	3 cut(s)	546, 636, 658
FbaI	TGATCA	1 cut(s)	1185
Fnu4HI	GCNGC	9 cut(s)	6, 9, 245, 525, 597, 748, 1212, 1257, 1356
FokI	GGATG	3 cut(s)	887, 1132, 1783
FriOI	GRGCYC	2 cut(s)	27, 456
Fsp4HI	GCNGC	9 cut(s)	6, 9, 245, 525, 597, 748, 1212, 1257, 1356
FspBI	CTAG	2 cut(s)	617, 1295
GluI	GCNGC	9 cut(s)	6, 9, 245, 525, 597, 748, 1212, 1257, 1356
GsaI	CCCAGC	2 cut(s)	680, 1248
GsuI	CTGGAG	1 cut(s)	810
HaeIII	GGCC	2 cut(s)	1081, 1625
HapII	CCGG	4 cut(s)	202, 261, 347, 384
HgaI	GACGC	3 cut(s)	59, 840, 1280
Hin1I	GRCGYC	1 cut(s)	51
Hin1II	CATG	6 cut(s)	197, 437, 451, 985, 1271, 1413
HincII	GTYRAC	2 cut(s)	1015, 1330
HindII	GTYRAC	2 cut(s)	1015, 1330
HindIII	AAGCTT	1 cut(s)	1028
HinfI	GANTC	8 cut(s)	146, 296, 308, 320, 712, 940, 952, 1555
HpaII	CCGG	4 cut(s)	202, 261, 347, 384
HphI	GGTGA	1 cut(s)	664
Hpy166II	GTNNAC	4 cut(s)	732, 1015, 1330, 1708
Hpy8I	GTNNAC	4 cut(s)	732, 1015, 1330, 1708
Hpy99I	CGWCG	4 cut(s)	53, 221, 281, 1119
HpyAV	CCTTC	2 cut(s)	1466, 1681
HpyCH4III	ACNGT	2 cut(s)	181, 1396
HpyF10VI	GCNNNNNNNGC	6 cut(s)	380, 602, 785, 1027, 1535, 1688
HpyF3I	CTNAG	7 cut(s)	144, 545, 936, 1260, 1584, 1661, 1692
Hsp92I	GRCGYC	1 cut(s)	51
Hsp92II	CATG	6 cut(s)	197, 437, 451, 985, 1271, 1413
Ksp22I	TGATCA	1 cut(s)	1185
Kzo9I	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
LmnI	GCTCC	4 cut(s)	204, 296, 451, 459
Lsp1109I	GCAGC	6 cut(s)	256, 583, 734, 1198, 1243, 1342
LweI	GCATC	6 cut(s)	361, 734, 1110, 1288, 1691, 1807
MabI	ACCWGGT	1 cut(s)	1742
MaeI	CTAG	2 cut(s)	617, 1295
MaeIII	GTNAC	8 cut(s)	32, 606, 1084, 1361, 1418, 1483, 1492, 1750
MalI	GATC	9 cut(s)	230, 253, 843, 879, 909, 1187, 1510, 1617, 1797
MboI	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
MflI	RGATCY	1 cut(s)	228
MhlI	GDGCHC	5 cut(s)	27, 209, 456, 651, 1710
MlsI	TGGCCA	1 cut(s)	1625
MluCI	AATT	7 cut(s)	853, 891, 1402, 1560, 1578, 1629, 1719
MluNI	TGGCCA	1 cut(s)	1625
MlyI	GAGTC	2 cut(s)	155, 1564
MmeI	TCCRAC	4 cut(s)	72, 348, 739, 904
Mox20I	TGGCCA	1 cut(s)	1625
Mph1103I	ATGCAT	1 cut(s)	1411
MroXI	GAANNNNTTC	1 cut(s)	1143
MscI	TGGCCA	1 cut(s)	1625
MseI	TTAA	3 cut(s)	773, 1251, 1517
MslI	CAYNNNNRTG	3 cut(s)	279, 815, 1713
Msp20I	TGGCCA	1 cut(s)	1625
MspI	CCGG	4 cut(s)	202, 261, 347, 384
MspR9I	CCNGG	4 cut(s)	261, 752, 828, 1744
Mva1269I	GAATGC	1 cut(s)	1786
MvaI	CCWGG	3 cut(s)	752, 828, 1744
MvnI	CGCG	1 cut(s)	127
MwoI	GCNNNNNNNGC	6 cut(s)	380, 602, 785, 1027, 1535, 1688
NciI	CCSGG	1 cut(s)	261
NdeII	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
NlaIII	CATG	6 cut(s)	197, 437, 451, 985, 1271, 1413
NlaIV	GGNNCC	4 cut(s)	265, 424, 648, 662
NmeAIII	GCCGAG	1 cut(s)	1037
NmuCI	GTSAC	4 cut(s)	32, 1084, 1418, 1492
NruI	TCGCGA	1 cut(s)	127
NsiI	ATGCAT	1 cut(s)	1411
NspI	RCATGY	2 cut(s)	197, 1413
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 1120
PctI	GAATGC	1 cut(s)	1786
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	6 cut(s)	296, 308, 320, 712, 940, 952
PflMI	CCANNNNNTGG	1 cut(s)	419
PfoI	TCCNGGA	1 cut(s)	826
PkrI	GCNGC	9 cut(s)	7, 10, 246, 526, 598, 749, 1213, 1258, 1357
PleI	GAGTC	2 cut(s)	154, 1563
PpsI	GAGTC	2 cut(s)	154, 1563
PpuMI	RGGWCCY	1 cut(s)	661
PsiI	TTATAA	2 cut(s)	342, 1400
Psp124BI	GAGCTC	1 cut(s)	456
Psp5II	RGGWCCY	1 cut(s)	661
Psp6I	CCWGG	3 cut(s)	750, 826, 1742
PspFI	CCCAGC	2 cut(s)	676, 1244
PspGI	CCWGG	3 cut(s)	750, 826, 1742
PspN4I	GGNNCC	4 cut(s)	265, 424, 648, 662
PspPI	GGNCC	1 cut(s)	661
PspPPI	RGGWCCY	1 cut(s)	661
PstI	CTGCAG	1 cut(s)	246
PstNI	CAGNNNCTG	2 cut(s)	747, 1828
PsuI	RGATCY	1 cut(s)	228
RruI	TCGCGA	1 cut(s)	127
RsaI	GTAC	1 cut(s)	1453
RsaNI	GTAC	1 cut(s)	1452
RseI	CAYNNNNRTG	3 cut(s)	279, 815, 1713
SacI	GAGCTC	1 cut(s)	456
SaqAI	TTAA	3 cut(s)	773, 1251, 1517
SatI	GCNGC	9 cut(s)	6, 9, 245, 525, 597, 748, 1212, 1257, 1356
Sau3AI	GATC	9 cut(s)	228, 251, 841, 877, 907, 1185, 1508, 1615, 1795
Sau96I	GGNCC	1 cut(s)	661
SchI	GAGTC	2 cut(s)	155, 1564
ScrFI	CCNGG	4 cut(s)	261, 752, 828, 1744
SduI	GDGCHC	5 cut(s)	27, 209, 456, 651, 1710
SexAI	ACCWGGT	1 cut(s)	1742
SfaNI	GCATC	6 cut(s)	361, 734, 1110, 1288, 1691, 1807
SfcI	CTRYAG	1 cut(s)	242
SinI	GGWCC	1 cut(s)	661
SmiMI	CAYNNNNRTG	3 cut(s)	279, 815, 1713
SmlI	CTYRAG	1 cut(s)	793
SmoI	CTYRAG	1 cut(s)	793
Sse9I	AATT	7 cut(s)	853, 891, 1402, 1560, 1578, 1629, 1719
SsiI	CCGC	7 cut(s)	9, 68, 524, 553, 643, 651, 692
SspI	AATATT	1 cut(s)	44
SspMI	CTAG	2 cut(s)	617, 1295
SstI	GAGCTC	1 cut(s)	456
StyD4I	CCNGG	4 cut(s)	259, 750, 826, 1742
TaaI	ACNGT	2 cut(s)	181, 1396
TaqI	TCGA	4 cut(s)	219, 840, 1558, 1685
TaqII	GACCGA	1 cut(s)	1521
TasI	AATT	7 cut(s)	853, 891, 1402, 1560, 1578, 1629, 1719
TauI	GCSGC	2 cut(s)	11, 527
TfiI	GAWTC	6 cut(s)	296, 308, 320, 712, 940, 952
Tru1I	TTAA	3 cut(s)	773, 1251, 1517
Tru9I	TTAA	3 cut(s)	773, 1251, 1517
TscAI	CASTG	1 cut(s)	1201
TseFI	GTSAC	4 cut(s)	32, 1084, 1418, 1492
TseI	GCWGC	7 cut(s)	5, 244, 596, 747, 1211, 1256, 1355
Tsp45I	GTSAC	4 cut(s)	32, 1084, 1418, 1492
TspDTI	ATGAA	9 cut(s)	105, 372, 422, 436, 692, 759, 1256, 1427, 1731
TspGWI	ACGGA	2 cut(s)	205, 1132
TspRI	CASTG	1 cut(s)	1201
Van91I	CCANNNNNTGG	1 cut(s)	419
VneI	GTGCAC	1 cut(s)	1706
VpaK11BI	GGWCC	1 cut(s)	661
XagI	CCTNNNNNAGG	1 cut(s)	917
XapI	RAATTY	1 cut(s)	1719
XbaI	TCTAGA	2 cut(s)	616, 1294
XceI	RCATGY	2 cut(s)	197, 1413
XcmI	CCANNNNNNNNNTGG	1 cut(s)	281
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	2 cut(s)	617, 1295
Zsp2I	ATGCAT	1 cut(s)	1411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.