Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007882

Physical Location & Seq

Genomic Coordinates Reverse (-)

27711528 .. 27717785

Gene Structure 6258 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g38260.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGGCCCCGTCTTTCGTCTTCGAACCTCCGAGCGATGAAGAATACTCAGAGCCAGAAGAGCAAGACTACTCCGACGCCGAAGACGAAGACGAAGAAGAACAAGAAGAAGCATCTCTAAAACCCTCGCGTCCTCCTCGCACATCTCAGTCCCCATGGGACTTCGCTGCCTACTCCGAAACCGTCGCCGAAGAACACGCTCGCCGGAGCACCACCTCCGTCGACGAGAAGATATCCAAGGCCCGCCAGCAACTCGCCGTCCCTCTCCCCGACCCGGACGACGCTTCTAGCTCCGGATCCGAATCCGATAAACAAGAAGATTATAAACCGGAAGATGAGGAAGACGACGGTGCTACGAATGCCGCTGAGAATAAGCCTTTCTTTGCTTCGTCGGACGGCACGTCGTTTCATGCGAACTCGTTCCTGGAGCTCAATTTGTCGAGACCTCTGCTCCGGGCCTGTGAGAAATTGGGCTATGCCAAGCCCACGCCGATTCAGGCAGCATGCATTCCGCTGGCTTTGTCGGGACGTGATATATGCGGAAGTGCCATTACTGGTTCGGGGAAGAGATTATTGTTTCGCCCGAAGCGGGTTCCTGCCATAAGAGTCCTTATTCTGACTCCTGCGAGAGAACTGGCAGTACAGGTTCATAGTATGATTGAGAAACTTGCTCAATTTACTGATATCAGATGTTGCCTGGTTGTTGGAGGTCTTTCACTAAAGGTCCAAGAGGCAGCCTTGAGATCAATGCCAGATATCGTCGTGGCTACCCCTGGACGGATTGTAGATCATTTACGAAATTCTATGTCTGTGGATTTGGATGATCTTGCTGTTCTAATTCTTGATGAGGCAGATCGCCTGCTGGAAGTGGGGTTTAGTGCTGAAATTCGTGAGCTGCTTCGTGTATGCCCCAAAAGGAGACAAACCATGCTATTTTCAGCTACGATGACTGAAGAAGTTGATGAACTTGTCCAGCTTTCTCTCACCAAACCACTACGCCTTTCAGCTGACCCATCTGCCAAACGGCCAGTGACACTAACTGAGGAGGTGGTTCGGATACGACGTATGCGTGAACTAAACCAGGAAGCAGTTCTACTTGCACTGTGCACAAAGACATTCAAACAAAGAGTGATCATATTCAGTGGCACAAAACAAGCTGCACATAGGTTGAAGATCTTATTTGGGTTAGCTGGCTTGAAAGCCGCTGAGCTTCATGGAAATCTCACTCAAGTCCAGCGCCTAGATGCATTGGAACTTTTCAGGAGGGAAAAGGTTGACTTTTTGATTGCCACAGATGTCGCTGCTCGTGGTCTTGACATAATTGGTGTTGAAACAGTTATAAATTATGCATGTCCACGTGATCTTACAAGCTATGTTCATAGAGTGGGTCGTACAGCAAGAGCTGGAAAAGTAGGATGTGCCGTGACTTTCGTGACTGATACTGACCGATCTCTGTTAAAAGCAATTGCAAAAAGAGCGGGTTCAAAGCTGAGGAGTCGAATCGTTGCCGAGCAGTCAATTACTAAGTGGTCTCAGATAATTGAGCAATTGGAAGATCAAGTGGCCACAATTCTTCGAGAAGAGAGCGAAGAGACAGCACTAAGAAGAGCTGAAATGGAAGCAACAAAGGTAGAGAATTTGATTGCACACAGAGATGAAATTTATTCACGCCCTAAAAGGACCTGGATTGTGACTGAAAAGGAGAAGAAGGAGGTAGTGAAGGCATCTAAGGCATCTGGTGAAAGAGAAAAACATTCTGGACGCGAGGTGATCAGTGCCGAACAAGCGGAAGAACTGAAAATGAAAGAAAAGAGGAAACGAGAGCGTGAGAAAAATTTACCGCGTAAGAAGCGCCGAAATTTGGAAGCTGCTAGAGAAATGTTGGAGGAAGAAAATCAAAATCGAAAGTCAGAAGGTAGTGGAACGACCAAGGAGAAGACAGGAGTGAAACTTGTTGACTTGGGTTACCGACGGGCAAAAGCTGTGAAGGCAGCAAATAAGGCATTGGATACTGGCAAGATTGTAAAGAAGGACAGCAAGAAATCTAATCGTCCTCCGCAAAGGACCCAGTCAAGGACAGAGGAGATGCAGGACCTATTCCAGAGTGATATGAGTCTAGGCAAACAGAACCGAAAAAGTGGTGGCACAGGAAAGAAAAAGTCCAAGAATTCCTTCAAAAGCAAGTCAAGGTACAAACGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

734

Amino Acids

82.24

Weight (kDa)

9.05

Isoelectric Point (pI)

52.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	47 - 128	2.1e-18	DEAD/DEAH box helicase
Helicase_C	PF00271	169 - 274	4.5e-28	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16630
fragaria_vesca	FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260
malus_domestica	MD01G1061100.v1.1 MD15G1442700.v1.1
prunus_persica	Prupe.1G363600_v2.0.a1 Prupe.3G157600_v2.0.a1
pyrus_communis	pycom15g39060
rosa_chinensis	RchiOBHm_Chr6g0303111
rosa_laevigata	RLG00000011107
rosa_multiflora	Rmu_co8350977.1_g000001 Rmu_sc0003721.1_g000002 Rmu_sc0008911.1_g000005
rosa_roxburghii	Rroxscaffold_7G00165010
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG433100 Rh6BG469600 Rh6CG445400 Rh6DG432200
rosa_wichuraiana	Rw6G037540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	321, 1337
AccBSI	CCGCTC	1 cut(s)	1475
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	3 cut(s)	127, 1761, 1840
AccIII	TCCGGA	1 cut(s)	290
AclWI	GGATC	2 cut(s)	288, 301
AcoI	YGGCCR	2 cut(s)	1022, 1560
AcsI	RAATTY	7 cut(s)	796, 882, 1633, 1656, 1831, 1855, 2164
AcuI	CTGAAG	1 cut(s)	969
AcvI	CACGTG	1 cut(s)	1355
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	3 cut(s)	639, 1390, 2189
AfiI	CCNNNNNNNGG	5 cut(s)	271, 586, 774, 1858, 2070
AgsI	TTSAA	6 cut(s)	1117, 1168, 1195, 1328, 1482, 2173
AhdI	GACNNNNNGTC	1 cut(s)	397
AjiI	CACGTC	2 cut(s)	399, 527
AjnI	CCWGG	5 cut(s)	420, 693, 769, 1077, 1679
AjuI	GAANNNNNNNTTGG	2 cut(s)	2153, 2185
Alw21I	GWGCWC	3 cut(s)	209, 429, 1106
Alw26I	GTCTC	4 cut(s)	433, 910, 1533, 1583
Alw44I	GTGCAC	1 cut(s)	1102
AlwI	GGATC	2 cut(s)	288, 301
Aor13HI	TCCGGA	1 cut(s)	290
AoxI	GGCC	5 cut(s)	3, 237, 453, 1022, 1560
ApaLI	GTGCAC	1 cut(s)	1102
ApeKI	GCWGC	8 cut(s)	164, 497, 731, 892, 1154, 1298, 1865, 1988
ApoI	RAATTY	7 cut(s)	796, 882, 1633, 1656, 1831, 1855, 2164
Asp700I	GAANNNNTTC	3 cut(s)	416, 1086, 2168
AspLEI	GCGC	2 cut(s)	1236, 1851
AspS9I	GGNCC	7 cut(s)	4, 238, 453, 721, 1677, 2061, 2089
AsuC2I	CCSGG	2 cut(s)	272, 452
AsuHPI	GGTGA	3 cut(s)	973, 1748, 1777
AsuII	TTCGAA	1 cut(s)	21
AvaII	GGWCC	4 cut(s)	721, 1677, 2061, 2089
BaeGI	GKGCMC	1 cut(s)	1106
BalI	TGGCCA	1 cut(s)	1562
BamHI	GGATCC	1 cut(s)	293
BanII	GRGCYC	1 cut(s)	429
BarI	GAAGNNNNNNTAC	4 cut(s)	532, 564, 1074, 1106
BauI	CACGAG	1 cut(s)	1302
BbrPI	CACGTG	1 cut(s)	1355
BbsI	GAAGAC	5 cut(s)	10, 87, 93, 345, 1940
Bbv12I	GWGCWC	3 cut(s)	209, 429, 1106
BbvCI	CCTCAGC	1 cut(s)	1487
BbvI	GCAGC	8 cut(s)	151, 509, 743, 879, 1141, 1285, 1852, 2000
BccI	CCATC	1 cut(s)	1018
BceAI	ACGGC	4 cut(s)	239, 409, 1037, 1403
BcgI	CGANNNNNNTGC	2 cut(s)	427, 461
BciT130I	CCWGG	5 cut(s)	422, 695, 771, 1079, 1681
BciVI	GTATCC	2 cut(s)	1047, 1999
BclI	TGATCA	2 cut(s)	1128, 1767
BcnI	CCSGG	2 cut(s)	272, 452
BcoDI	GTCTC	4 cut(s)	433, 910, 1533, 1583
BfaI	CTAG	4 cut(s)	285, 1238, 1869, 2114
BfoI	RGCGCY	2 cut(s)	1237, 1852
BfuI	GTATCC	2 cut(s)	1047, 1999
BglII	AGATCT	1 cut(s)	1170
BlpI	GCTNAGC	1 cut(s)	1203
Bme1390I	CCNGG	7 cut(s)	272, 422, 452, 695, 771, 1079, 1681
Bme18I	GGWCC	4 cut(s)	721, 1677, 2061, 2089
BmeRI	GACNNNNNGTC	1 cut(s)	397
BmgBI	CACGTC	2 cut(s)	399, 527
BmgT120I	GGNCC	7 cut(s)	4, 238, 453, 721, 1677, 2061, 2089
BmiI	GGNNCC	4 cut(s)	6, 295, 591, 2063
BmrFI	CCNGG	7 cut(s)	272, 422, 452, 695, 771, 1079, 1681
BmrI	ACTGGG	1 cut(s)	2059
BmsI	GCATC	5 cut(s)	119, 1231, 1730, 1739, 2073
BmuI	ACTGGG	1 cut(s)	2059
BpiI	GAAGAC	5 cut(s)	10, 87, 93, 345, 1940
BpmI	CTGGAG	1 cut(s)	443
Bpu10I	CCTNAGC	1 cut(s)	1487
Bpu1102I	GCTNAGC	1 cut(s)	1203
Bpu14I	TTCGAA	1 cut(s)	21
BpuEI	CTTGAG	2 cut(s)	757, 1209
BpuMI	CCSGG	2 cut(s)	272, 452
BsaAI	YACGTR	1 cut(s)	1355
BsaBI	GATNNNNATC	1 cut(s)	298
BsaHI	GRCGYC	1 cut(s)	75
BsaI	GGTCTC	2 cut(s)	433, 1533
BsaJI	CCNNGG	4 cut(s)	152, 234, 769, 1926
BsaWI	WCCGGW	2 cut(s)	290, 325
BsaXI	ACNNNNNCTCC	2 cut(s)	432, 462
Bsc4I	CCNNNNNNNGG	5 cut(s)	271, 586, 774, 1858, 2070
Bse1I	ACTGG	5 cut(s)	556, 636, 1025, 2014, 2065
Bse8I	GATNNNNATC	1 cut(s)	298
BseAI	TCCGGA	1 cut(s)	290
BseBI	CCWGG	5 cut(s)	422, 695, 771, 1079, 1681
BseDI	CCNNGG	4 cut(s)	152, 234, 769, 1926
BseGI	GGATG	2 cut(s)	823, 1418
BseJI	GATNNNNATC	1 cut(s)	298
BseLI	CCNNNNNNNGG	5 cut(s)	271, 586, 774, 1858, 2070
BseMII	CTCAG	7 cut(s)	60, 158, 354, 1029, 1194, 1478, 1544
BseNI	ACTGG	5 cut(s)	556, 636, 1025, 2014, 2065
BseRI	GAGGAG	4 cut(s)	123, 1055, 1504, 2093
BseSI	GKGCMC	1 cut(s)	1106
BseXI	GCAGC	8 cut(s)	151, 509, 743, 879, 1141, 1285, 1852, 2000
BsgI	GTGCAG	1 cut(s)	1140
Bsh1236I	CGCG	3 cut(s)	127, 1761, 1840
BshFI	GGCC	5 cut(s)	5, 239, 455, 1024, 1562
BsiHKAI	GWGCWC	3 cut(s)	209, 429, 1106
BsiSI	CCGG	5 cut(s)	202, 272, 291, 326, 451
BslFI	GGGAC	4 cut(s)	133, 170, 242, 537
BslI	CCNNNNNNNGG	5 cut(s)	271, 586, 774, 1858, 2070
BsmAI	GTCTC	4 cut(s)	433, 910, 1533, 1583
BsmFI	GGGAC	4 cut(s)	133, 170, 242, 537
BsmI	GAATGC	2 cut(s)	361, 504
BsnI	GGCC	5 cut(s)	5, 239, 455, 1024, 1562
Bso31I	GGTCTC	2 cut(s)	433, 1533
Bsp119I	TTCGAA	1 cut(s)	21
Bsp1286I	GDGCHC	3 cut(s)	209, 429, 1106
Bsp13I	TCCGGA	1 cut(s)	290
Bsp1720I	GCTNAGC	1 cut(s)	1203
Bsp19I	CCATGG	1 cut(s)	152
BspANI	GGCC	5 cut(s)	5, 239, 455, 1024, 1562
BspCNI	CTCAG	7 cut(s)	59, 157, 355, 1030, 1195, 1479, 1543
BspEI	TCCGGA	1 cut(s)	290
BspFNI	CGCG	3 cut(s)	127, 1761, 1840
BspLI	GGNNCC	4 cut(s)	6, 295, 591, 2063
BspPI	GGATC	2 cut(s)	288, 301
BspQI	GCTCTTC	2 cut(s)	51, 1597
BspT104I	TTCGAA	1 cut(s)	21
BspTNI	GGTCTC	2 cut(s)	433, 1533
BsrBI	CCGCTC	1 cut(s)	1475
BsrI	ACTGG	5 cut(s)	556, 636, 1025, 2014, 2065
BssECI	CCNNGG	4 cut(s)	152, 234, 769, 1926
BssNI	GRCGYC	1 cut(s)	75
BssSI	CACGAG	1 cut(s)	1302
BssT1I	CCWWGG	3 cut(s)	152, 234, 1926
Bst2BI	CACGAG	1 cut(s)	1302
Bst2UI	CCWGG	5 cut(s)	422, 695, 771, 1079, 1681
Bst4CI	ACNGT	4 cut(s)	181, 347, 1101, 1333
Bst6I	CTCTTC	5 cut(s)	51, 557, 1572, 1581, 1597
BstACI	GRCGYC	1 cut(s)	75
BstBAI	YACGTR	1 cut(s)	1355
BstBI	TTCGAA	1 cut(s)	21
BstC8I	GCNNGC	7 cut(s)	199, 241, 245, 502, 513, 857, 1189
BstDSI	CCRYGG	1 cut(s)	152
BstEII	GGTNACC	1 cut(s)	1961
BstF5I	GGATG	2 cut(s)	823, 1418
BstFNI	CGCG	3 cut(s)	127, 1761, 1840
BstH2I	RGCGCY	2 cut(s)	1237, 1852
BstHHI	GCGC	2 cut(s)	1236, 1851
BstMAI	GTCTC	4 cut(s)	433, 910, 1533, 1583
BstMWI	GCNNNNNNNGC	8 cut(s)	58, 356, 1472, 1727, 1781, 1846, 1985, 1997
BstNI	CCWGG	5 cut(s)	422, 695, 771, 1079, 1681
BstNSI	RCATGY	2 cut(s)	504, 1350
BstPI	GGTNACC	1 cut(s)	1961
BstSCI	CCNGG	7 cut(s)	270, 420, 450, 693, 769, 1077, 1679
BstSLI	GKGCMC	1 cut(s)	1106
BstUI	CGCG	3 cut(s)	127, 1761, 1840
BstV1I	GCAGC	8 cut(s)	151, 509, 743, 879, 1141, 1285, 1852, 2000
BstV2I	GAAGAC	5 cut(s)	10, 87, 93, 345, 1940
BstX2I	RGATCY	2 cut(s)	293, 1170
BstYI	RGATCY	2 cut(s)	293, 1170
BsuI	GTATCC	2 cut(s)	1047, 1999
BsuRI	GGCC	5 cut(s)	5, 239, 455, 1024, 1562
BtgI	CCRYGG	1 cut(s)	152
BtgZI	GCGATG	1 cut(s)	48
BtrI	CACGTC	2 cut(s)	399, 527
BtsCI	GGATG	2 cut(s)	823, 1418
BtsIMutI	CAGTG	4 cut(s)	1032, 1097, 1144, 1777
Cac8I	GCNNGC	7 cut(s)	199, 241, 245, 502, 513, 857, 1189
CfoI	GCGC	2 cut(s)	1236, 1851
Cfr13I	GGNCC	7 cut(s)	4, 238, 453, 721, 1677, 2061, 2089
CseI	GACGC	4 cut(s)	83, 116, 287, 1767
Csp6I	GTAC	3 cut(s)	638, 1389, 2188
CviAII	CATG	6 cut(s)	153, 407, 501, 925, 1211, 1347
CviQI	GTAC	3 cut(s)	638, 1389, 2188
DriI	GACNNNNNGTC	1 cut(s)	397
EaeI	YGGCCR	2 cut(s)	1022, 1560
Eam1104I	CTCTTC	5 cut(s)	51, 557, 1572, 1581, 1597
Eam1105I	GACNNNNNGTC	1 cut(s)	397
EarI	CTCTTC	5 cut(s)	51, 557, 1572, 1581, 1597
Ecl136II	GAGCTC	1 cut(s)	427
Eco130I	CCWWGG	3 cut(s)	152, 234, 1926
Eco24I	GRGCYC	1 cut(s)	429
Eco31I	GGTCTC	2 cut(s)	433, 1533
Eco32I	GATATC	3 cut(s)	231, 682, 754
Eco47I	GGWCC	4 cut(s)	721, 1677, 2061, 2089
Eco53kI	GAGCTC	1 cut(s)	427
Eco57I	CTGAAG	1 cut(s)	969
Eco72I	CACGTG	1 cut(s)	1355
Eco91I	GGTNACC	1 cut(s)	1961
EcoICRI	GAGCTC	1 cut(s)	427
EcoO109I	RGGNCCY	3 cut(s)	1677, 2061, 2089
EcoO65I	GGTNACC	1 cut(s)	1961
EcoRI	GAATTC	1 cut(s)	2164
EcoRII	CCWGG	5 cut(s)	420, 693, 769, 1077, 1679
EcoRV	GATATC	3 cut(s)	231, 682, 754
EcoT14I	CCWWGG	3 cut(s)	152, 234, 1926
EcoT22I	ATGCAT	3 cut(s)	506, 1246, 1348
EcoT38I	GRGCYC	1 cut(s)	429
ErhI	CCWWGG	3 cut(s)	152, 234, 1926
FaeI	CATG	6 cut(s)	156, 410, 504, 928, 1214, 1350
FalI	AAGNNNNNCTT	6 cut(s)	362, 394, 1259, 1291, 2153, 2185
FaqI	GGGAC	4 cut(s)	133, 170, 242, 537
FatI	CATG	6 cut(s)	152, 406, 500, 924, 1210, 1346
FauI	CCCGC	3 cut(s)	248, 579, 1468
FbaI	TGATCA	2 cut(s)	1128, 1767
FblI	GTMKAC	1 cut(s)	219
FokI	GGATG	2 cut(s)	830, 1425
FriOI	GRGCYC	1 cut(s)	429
FspBI	CTAG	4 cut(s)	285, 1238, 1869, 2114
GlaI	GCGC	2 cut(s)	1235, 1850
GsuI	CTGGAG	1 cut(s)	443
HaeII	RGCGCY	2 cut(s)	1237, 1852
HaeIII	GGCC	5 cut(s)	5, 239, 455, 1024, 1562
HapII	CCGG	5 cut(s)	202, 272, 291, 326, 451
HgaI	GACGC	4 cut(s)	83, 116, 287, 1767
HhaI	GCGC	2 cut(s)	1236, 1851
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	6 cut(s)	156, 410, 504, 928, 1214, 1350
Hin6I	GCGC	2 cut(s)	1234, 1849
HinP1I	GCGC	2 cut(s)	1234, 1849
HincII	GTYRAC	3 cut(s)	220, 1273, 1954
HindII	GTYRAC	3 cut(s)	220, 1273, 1954
HinfI	GANTC	7 cut(s)	299, 490, 603, 616, 1492, 1497, 2110
HpaII	CCGG	5 cut(s)	202, 272, 291, 326, 451
HphI	GGTGA	3 cut(s)	973, 1748, 1777
Hpy166II	GTNNAC	6 cut(s)	220, 1070, 1104, 1273, 1352, 1954
Hpy8I	GTNNAC	6 cut(s)	220, 1070, 1104, 1273, 1352, 1954
HpyAV	CCTTC	6 cut(s)	1699, 1711, 1904, 1978, 2020, 2179
HpyCH4III	ACNGT	4 cut(s)	181, 347, 1101, 1333
HpyCH4IV	ACGT	4 cut(s)	398, 526, 1060, 1354
HpyCH4V	TGCA	9 cut(s)	504, 1097, 1104, 1157, 1244, 1346, 1466, 1643, 2086
HpyF10VI	GCNNNNNNNGC	8 cut(s)	58, 356, 1472, 1727, 1781, 1846, 1985, 1997
HpySE526I	ACGT	4 cut(s)	398, 526, 1060, 1354
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	6 cut(s)	156, 410, 504, 928, 1214, 1350
HspAI	GCGC	2 cut(s)	1234, 1849
Kpn2I	TCCGGA	1 cut(s)	290
Ksp22I	TGATCA	2 cut(s)	1128, 1767
LguI	GCTCTTC	2 cut(s)	51, 1597
LmnI	GCTCC	4 cut(s)	204, 293, 424, 453
Lsp1109I	GCAGC	8 cut(s)	151, 509, 743, 879, 1141, 1285, 1852, 2000
LweI	GCATC	5 cut(s)	119, 1231, 1730, 1739, 2073
MaeI	CTAG	4 cut(s)	285, 1238, 1869, 2114
MaeII	ACGT	4 cut(s)	398, 526, 1060, 1354
MaeIII	GTNAC	5 cut(s)	1027, 1420, 1429, 1687, 1961
MbiI	CCGCTC	1 cut(s)	1475
MfeI	CAATTG	2 cut(s)	1461, 1544
MflI	RGATCY	2 cut(s)	293, 1170
MhlI	GDGCHC	3 cut(s)	209, 429, 1106
MlsI	TGGCCA	1 cut(s)	1562
MluNI	TGGCCA	1 cut(s)	1562
MlyI	GAGTC	4 cut(s)	610, 612, 1501, 2119
MmeI	TCCRAC	4 cut(s)	96, 369, 682, 1860
Mox20I	TGGCCA	1 cut(s)	1562
Mph1103I	ATGCAT	3 cut(s)	506, 1246, 1348
MroI	TCCGGA	1 cut(s)	290
MroXI	GAANNNNTTC	3 cut(s)	416, 1086, 2168
MscI	TGGCCA	1 cut(s)	1562
MseI	TTAA	1 cut(s)	1454
MslI	CAYNNNNRTG	1 cut(s)	1650
Msp20I	TGGCCA	1 cut(s)	1562
MspA1I	CMGCKG	4 cut(s)	362, 511, 1004, 1202
MspI	CCGG	5 cut(s)	202, 272, 291, 326, 451
MspR9I	CCNGG	7 cut(s)	272, 422, 452, 695, 771, 1079, 1681
MunI	CAATTG	2 cut(s)	1461, 1544
Mva1269I	GAATGC	2 cut(s)	361, 504
MvaI	CCWGG	5 cut(s)	422, 695, 771, 1079, 1681
MvnI	CGCG	3 cut(s)	127, 1761, 1840
MwoI	GCNNNNNNNGC	8 cut(s)	58, 356, 1472, 1727, 1781, 1846, 1985, 1997
NciI	CCSGG	2 cut(s)	272, 452
NcoI	CCATGG	1 cut(s)	152
NlaIII	CATG	6 cut(s)	156, 410, 504, 928, 1214, 1350
NlaIV	GGNNCC	4 cut(s)	6, 295, 591, 2063
NmeAIII	GCCGAG	1 cut(s)	1531
NmuCI	GTSAC	4 cut(s)	1027, 1420, 1429, 1687
NsiI	ATGCAT	3 cut(s)	506, 1246, 1348
NspI	RCATGY	2 cut(s)	504, 1350
NspV	TTCGAA	1 cut(s)	21
PaeI	GCATGC	1 cut(s)	504
PciSI	GCTCTTC	2 cut(s)	51, 1597
PcsI	WCGNNNNNNNCGW	5 cut(s)	81, 395, 407, 1057, 1063
PctI	GAATGC	2 cut(s)	361, 504
PdmI	GAANNNNTTC	3 cut(s)	416, 1086, 2168
PfeI	GAWTC	3 cut(s)	299, 490, 1497
PflFI	GACNNNGTC	1 cut(s)	2065
PfoI	TCCNGGA	1 cut(s)	420
PleI	GAGTC	4 cut(s)	610, 611, 1500, 2118
PmaCI	CACGTG	1 cut(s)	1355
PmlI	CACGTG	1 cut(s)	1355
PpsI	GAGTC	4 cut(s)	610, 611, 1500, 2118
Ppu21I	YACGTR	1 cut(s)	1355
PpuMI	RGGWCCY	3 cut(s)	1677, 2061, 2089
PsiI	TTATAA	2 cut(s)	321, 1337
Psp124BI	GAGCTC	1 cut(s)	429
Psp5II	RGGWCCY	3 cut(s)	1677, 2061, 2089
Psp6I	CCWGG	5 cut(s)	420, 693, 769, 1077, 1679
PspCI	CACGTG	1 cut(s)	1355
PspEI	GGTNACC	1 cut(s)	1961
PspGI	CCWGG	5 cut(s)	420, 693, 769, 1077, 1679
PspN4I	GGNNCC	4 cut(s)	6, 295, 591, 2063
PspPI	GGNCC	7 cut(s)	4, 238, 453, 721, 1677, 2061, 2089
PspPPI	RGGWCCY	3 cut(s)	1677, 2061, 2089
PsrI	GAACNNNNNNTAC	2 cut(s)	621, 653
PsuI	RGATCY	2 cut(s)	293, 1170
PsyI	GACNNNGTC	1 cut(s)	2065
PvuII	CAGCTG	1 cut(s)	1004
RsaI	GTAC	3 cut(s)	639, 1390, 2189
RsaNI	GTAC	3 cut(s)	638, 1389, 2188
RseI	CAYNNNNRTG	1 cut(s)	1650
SacI	GAGCTC	1 cut(s)	429
SalI	GTCGAC	1 cut(s)	218
SapI	GCTCTTC	2 cut(s)	51, 1597
SaqAI	TTAA	1 cut(s)	1454
Sau96I	GGNCC	7 cut(s)	4, 238, 453, 721, 1677, 2061, 2089
SchI	GAGTC	4 cut(s)	610, 612, 1501, 2119
ScrFI	CCNGG	7 cut(s)	272, 422, 452, 695, 771, 1079, 1681
SduI	GDGCHC	3 cut(s)	209, 429, 1106
SfaNI	GCATC	5 cut(s)	119, 1231, 1730, 1739, 2073
SfuI	TTCGAA	1 cut(s)	21
SgrDI	CGTCGACG	1 cut(s)	218
SinI	GGWCC	4 cut(s)	721, 1677, 2061, 2089
SmiMI	CAYNNNNRTG	1 cut(s)	1650
SmlI	CTYRAG	2 cut(s)	736, 1224
SmoI	CTYRAG	2 cut(s)	736, 1224
SphI	GCATGC	1 cut(s)	504
SspMI	CTAG	4 cut(s)	285, 1238, 1869, 2114
SstI	GAGCTC	1 cut(s)	429
StyD4I	CCNGG	7 cut(s)	270, 420, 450, 693, 769, 1077, 1679
StyI	CCWWGG	3 cut(s)	152, 234, 1926
TaaI	ACNGT	4 cut(s)	181, 347, 1101, 1333
TaiI	ACGT	4 cut(s)	401, 529, 1063, 1357
TaqI	TCGA	6 cut(s)	21, 219, 437, 1495, 1573, 1900
TaqII	GACCGA	1 cut(s)	1458
TatI	WGTACW	1 cut(s)	637
TauI	GCSGC	2 cut(s)	362, 1202
TfiI	GAWTC	3 cut(s)	299, 490, 1497
Tru1I	TTAA	1 cut(s)	1454
Tru9I	TTAA	1 cut(s)	1454
TscAI	CASTG	4 cut(s)	1032, 1104, 1144, 1777
TseFI	GTSAC	4 cut(s)	1027, 1420, 1429, 1687
TseI	GCWGC	8 cut(s)	164, 497, 731, 892, 1154, 1298, 1865, 1988
Tsp45I	GTSAC	4 cut(s)	1027, 1420, 1429, 1687
TspDTI	ATGAA	8 cut(s)	51, 395, 635, 975, 1199, 1364, 1668, 1814
TspGWI	ACGGA	2 cut(s)	205, 790
TspRI	CASTG	4 cut(s)	1032, 1104, 1144, 1777
Tth111I	GACNNNGTC	1 cut(s)	2065
VneI	GTGCAC	1 cut(s)	1102
VpaK11BI	GGWCC	4 cut(s)	721, 1677, 2061, 2089
XapI	RAATTY	7 cut(s)	796, 882, 1633, 1656, 1831, 1855, 2164
XceI	RCATGY	2 cut(s)	504, 1350
XmiI	GTMKAC	1 cut(s)	219
XmnI	GAANNNNTTC	3 cut(s)	416, 1086, 2168
XspI	CTAG	4 cut(s)	285, 1238, 1869, 2114
Zsp2I	ATGCAT	3 cut(s)	506, 1246, 1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.