Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007882

Physical Location & Seq

Genomic Coordinates Reverse (-)

33432409 .. 33439895

Gene Structure 7487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G363600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGCTCCGAGTTTCGTATTCGAGCCCCCAAGCGACGAAGAATATTCCGATGCCGAAGAAGAAGAACAGCAAGAAGAACAACAGGAGGAAGAAGAAGATGAACAACAAGAAGGTGTAAAACCCTCGCGACCTCGCCATTCTCAATCCCCATGGGACTTTGCTGCGTACTCCGAAACAGTCGCCGAAGAACATGCTCGTCGAAGCACCACCTCCGTCGATTTCAAGATCTCCAAAGCCCTGCAACAACGATCCGTCCCAATCTCAGACCCCATTTCCGACGATGGTACTAGCTCCGGATCCGAGTCCGACAAACAGGAAGATTATAAGCCAGAAGATGATGAAGGCGATGATGCCACTAATGTCAGTGACAGTAAGTCATTTTTCTCTCCCTCAGACGGAGCGTCGTTTAATGCAAATTCGTTTATGGAGCTCAATTTGTCACGTCCTTTGCTTCGGGCGTGTGAGAAGTTGGGCTATACCAAGCCGACTCCAATTCAGGCAGCGTGCATACCATTAGCTCTGACCGGGCGTGATATATGTGGGAGTGCAATTACTGGTTCTGGGAAGACCGCTGCCTTTGCCTTACCTACTCTGGAGAGACTATTGTTTCGCCCGAAGCGGGTACCAGCTATAAGAGTCCTTGTTCTGACCCCAGCCAGAGAACTGGCAGTTCAGGTTCATAGTATGATTGAGAAACTTGCCCAGTTTACCGATATCAGATGTTGCCTGGTTGTTGGAGGGTTATCATTAAAGGCACAAGAGGCGGCCTTGAGATCAATGCCAGATATCGTTGTGGCTACTCCTGGACGCATTATAGATCATTTACGTAATTCTATGTCTGTGGATTTGGAAGATCTCGCTGTTCTAATTCTTGATGAGGCAGATCGCCTTTTGGAGGTTGGATTTAGTGCTGAGATTCGTGAGCTGATTCGTGTATGCCCCAAAAGGAGACAAACCATGCTATTTTCAGCTACGATGACTGAAGAAGTTGATGAACTTGTCAAACTTTCTCTGACCAAACCAGTACGCCTCTCAGCTGACCCTTCTGCGAAACGTCCAGTGACACTAACTGAGGAGGTGGTTAGAATACGACGAATGCGTGAAGTAAATCAGGAGGCAGTTCTACTTGCATTGTGTTCAAAGACATTCACTTCCAGAGTGATCATATTCAGTGGTACAAAACAGGCAGCACACAGGTTGAAGATATTATTTGGGTTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGCAACCTTACTCAAGTCCAGCGCCTAGATGCATTGGAACTTTTCAGGAAGCAGGGAGCTGATTATTTGATTGCAACTGATGTGGCTGCTCGTGGACTTGACATAATTGGTGTTCAAACAGTTATAAACTATGCATGTCCTCGTGACCTTACAAGCTATGTTCATCGCGTGGGTCGTACAGCAAGAGCTGGCAGAGAAGGATATGCTGTTACTTTCGTGACAGACAATGACCGATCACTTTTAAAAGCCATTGCAAAAAGAGCTGGTTCAAAGTTGAGGAGTCGAATTGTGGCAGAACAATCAATTACTAAGTGGTCTCAGATAATTGAGCAGATGGAAGATCAAGTGGCCGCAATTTTTCAAGAAGAGAGGGAAGAGCAAGCACTAAGAAAAGCTGAAATGGAAGCAAACAAGGCAGAGAATATGATTGCACACAAAGATGAAATTTATTCGCGCCCCAAAAGAACCTGGTTTGTAACAGAAAAGGAAAAAAGGATTGTAATGAAGGCAGCTAAGGCATCCAATGAAAGTGAAAAGCACTCTGGAATTGAGGTAATCAGTGCCCAACAAGCTGAAGACTTGAAACTGAAAGAAAAGAGGAAGCGGGAGCGTGAGAAAAATTTGCCCCGAAAGAAGCGAAGGAAATTGGAAGCAGCCAGGGAAATGTTAGATGAGGAAAATCAAAATGAAAAGTCGGATGGTAGTGGAAAAAGTAAGAAGGAGAAGACTGGAATGCCACTTGTTGATGTGGCTTACCGACGGGCAAAAGCTGTGAAGGCTGCAAAGAAGGCAACAGATGCTGGCAAGATTGGGAGGAAGCCTAGCAAGAAGTCTAGTAGTACTCCGCAAAGAACTGAGTCAAGGACAGATGAGATGCAGGACCTGTTCCAGAGCGACATGAGTCAAAGGAAGCAGAACAGAAAAAGCAATGGAGCCGGAAAGAAAAAGTCCAAAAATTCTTTTAAGAGCAAGTCAAGGTACAAGCGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

746

Amino Acids

83.52

Weight (kDa)

9.1

Isoelectric Point (pI)

52.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16630
fragaria_vesca	FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260 FvH4_2g38260
malus_domestica	MD01G1061100.v1.1 MD15G1442700.v1.1
prunus_persica	Prupe.1G363600_v2.0.a1 Prupe.3G157600_v2.0.a1
pyrus_communis	pycom15g39060
rosa_chinensis	RchiOBHm_Chr6g0303111
rosa_laevigata	RLG00000011107
rosa_multiflora	Rmu_co8350977.1_g000001 Rmu_sc0003721.1_g000002 Rmu_sc0008911.1_g000005
rosa_roxburghii	Rroxscaffold_7G00165010
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG433100 Rh6BG469600 Rh6CG445400 Rh6DG432200
rosa_wichuraiana	Rw6G037540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	324, 1370
Acc65I	GGTACC	1 cut(s)	622
AccB1I	GGYRCC	1 cut(s)	622
AccII	CGCG	3 cut(s)	127, 1413, 1699
AccIII	TCCGGA	1 cut(s)	293
AciI	CCGC	7 cut(s)	570, 619, 764, 1596, 1849, 2090, 2230
AclWI	GGATC	3 cut(s)	243, 291, 304
AcoI	YGGCCR	1 cut(s)	1593
AcsI	RAATTY	4 cut(s)	415, 1689, 1864, 2200
AcuI	CTGAAG	2 cut(s)	1002, 1839
AfaI	GTAC	8 cut(s)	167, 286, 624, 1026, 1177, 1423, 2086, 2225
AfiI	CCNNNNNNNGG	3 cut(s)	395, 619, 895
AgsI	TTSAA	7 cut(s)	223, 1140, 1201, 1361, 1515, 1607, 1828
AhdI	GACNNNNNGTC	2 cut(s)	373, 400
AjiI	CACGTC	1 cut(s)	443
AjnI	CCWGG	4 cut(s)	726, 802, 1712, 1901
Alw21I	GWGCWC	1 cut(s)	432
Alw26I	GTCTC	3 cut(s)	592, 943, 1566
AlwI	GGATC	3 cut(s)	243, 291, 304
AlwNI	CAGNNNCTG	2 cut(s)	2045, 2128
Aor13HI	TCCGGA	1 cut(s)	293
AoxI	GGCC	2 cut(s)	765, 1593
ApeKI	GCWGC	9 cut(s)	161, 500, 572, 1187, 1232, 1331, 1754, 1898, 2024
ApoI	RAATTY	4 cut(s)	415, 1689, 1864, 2200
ArsI	GACNNNNNNTTYG	2 cut(s)	591, 623
Asp718I	GGTACC	1 cut(s)	622
AspLEI	GCGC	2 cut(s)	1269, 1701
AspS9I	GGNCC	1 cut(s)	2125
AsuC2I	CCSGG	1 cut(s)	526
AvaII	GGWCC	1 cut(s)	2125
BaeGI	GKGCMC	1 cut(s)	1810
BamHI	GGATCC	1 cut(s)	296
BanI	GGYRCC	1 cut(s)	622
BanII	GRGCYC	2 cut(s)	27, 432
BauI	CACGAG	2 cut(s)	1335, 1386
BbsI	GAAGAC	3 cut(s)	572, 1827, 1976
Bbv12I	GWGCWC	1 cut(s)	432
BbvI	GCAGC	9 cut(s)	148, 512, 559, 1199, 1219, 1318, 1766, 1910, 2011
BccI	CCATC	3 cut(s)	275, 1573, 1937
BcgI	CGANNNNNNTGC	2 cut(s)	173, 207
BciT130I	CCWGG	4 cut(s)	728, 804, 1714, 1903
BclI	TGATCA	1 cut(s)	1161
BcnI	CCSGG	1 cut(s)	526
BcoDI	GTCTC	3 cut(s)	592, 943, 1566
BfaI	CTAG	4 cut(s)	288, 1271, 2067, 2079
BfoI	RGCGCY	1 cut(s)	1270
BglII	AGATCT	2 cut(s)	225, 853
BlpI	GCTNAGC	1 cut(s)	1236
BmcAI	AGTACT	1 cut(s)	2086
Bme1390I	CCNGG	5 cut(s)	526, 728, 804, 1714, 1903
Bme18I	GGWCC	1 cut(s)	2125
BmeRI	GACNNNNNGTC	2 cut(s)	373, 400
BmgBI	CACGTC	1 cut(s)	443
BmgT120I	GGNCC	1 cut(s)	2125
BmiI	GGNNCC	4 cut(s)	6, 298, 624, 2179
BmrFI	CCNGG	5 cut(s)	526, 728, 804, 1714, 1903
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	6 cut(s)	40, 340, 1264, 1772, 2032, 2109
BmuI	ACTGGG	1 cut(s)	697
BoxI	GACNNNNGTC	1 cut(s)	2145
BpiI	GAAGAC	3 cut(s)	572, 1827, 1976
BpmI	CTGGAG	1 cut(s)	614
Bpu10I	CCTNAGC	1 cut(s)	1758
Bpu1102I	GCTNAGC	1 cut(s)	1236
BpuEI	CTTGAG	2 cut(s)	790, 1242
BpuMI	CCSGG	1 cut(s)	526
BsaAI	YACGTR	1 cut(s)	827
BsaI	GGTCTC	1 cut(s)	1566
BsaJI	CCNNGG	2 cut(s)	149, 1902
BsaWI	WCCGGW	1 cut(s)	293
Bsc4I	CCNNNNNNNGG	3 cut(s)	395, 619, 895
Bse1I	ACTGG	6 cut(s)	559, 669, 703, 1022, 1058, 1978
Bse3DI	GCAATG	2 cut(s)	1494, 2179
BseAI	TCCGGA	1 cut(s)	293
BseBI	CCWGG	4 cut(s)	728, 804, 1714, 1903
BseDI	CCNNGG	2 cut(s)	149, 1902
BseGI	GGATG	2 cut(s)	1763, 1948
BseLI	CCNNNNNNNGG	3 cut(s)	395, 619, 895
BseMI	GCAATG	2 cut(s)	1494, 2179
BseMII	CTCAG	8 cut(s)	276, 405, 903, 1047, 1062, 1227, 1577, 2091
BseNI	ACTGG	6 cut(s)	559, 669, 703, 1022, 1058, 1978
BseRI	GAGGAG	2 cut(s)	1088, 1537
BseSI	GKGCMC	1 cut(s)	1810
BseXI	GCAGC	9 cut(s)	148, 512, 559, 1199, 1219, 1318, 1766, 1910, 2011
BseYI	CCCAGC	1 cut(s)	652
Bsh1236I	CGCG	3 cut(s)	127, 1413, 1699
BshFI	GGCC	2 cut(s)	767, 1595
BshNI	GGYRCC	1 cut(s)	622
BsiHKAI	GWGCWC	1 cut(s)	432
BsiSI	CCGG	3 cut(s)	294, 525, 2181
BslFI	GGGAC	2 cut(s)	167, 239
BslI	CCNNNNNNNGG	3 cut(s)	395, 619, 895
BsmAI	GTCTC	3 cut(s)	592, 943, 1566
BsmFI	GGGAC	2 cut(s)	167, 239
BsmI	GAATGC	2 cut(s)	1101, 1983
BsnI	GGCC	2 cut(s)	767, 1595
Bso31I	GGTCTC	1 cut(s)	1566
Bsp1286I	GDGCHC	3 cut(s)	27, 432, 1810
Bsp13I	TCCGGA	1 cut(s)	293
Bsp1720I	GCTNAGC	1 cut(s)	1236
Bsp19I	CCATGG	1 cut(s)	149
Bsp68I	TCGCGA	1 cut(s)	127
BspACI	CCGC	7 cut(s)	570, 619, 764, 1596, 1849, 2090, 2230
BspANI	GGCC	2 cut(s)	767, 1595
BspCNI	CTCAG	8 cut(s)	275, 404, 904, 1046, 1063, 1228, 1576, 2092
BspEI	TCCGGA	1 cut(s)	293
BspFNI	CGCG	3 cut(s)	127, 1413, 1699
BspLI	GGNNCC	4 cut(s)	6, 298, 624, 2179
BspPI	GGATC	3 cut(s)	243, 291, 304
BspQI	GCTCTTC	1 cut(s)	1614
BspT107I	GGYRCC	1 cut(s)	622
BspTNI	GGTCTC	1 cut(s)	1566
BsrDI	GCAATG	2 cut(s)	1494, 2179
BsrI	ACTGG	6 cut(s)	559, 669, 703, 1022, 1058, 1978
BssECI	CCNNGG	2 cut(s)	149, 1902
BssSI	CACGAG	2 cut(s)	1335, 1386
BssT1I	CCWWGG	1 cut(s)	149
Bst2BI	CACGAG	2 cut(s)	1335, 1386
Bst2UI	CCWGG	4 cut(s)	728, 804, 1714, 1903
Bst4CI	ACNGT	3 cut(s)	178, 371, 1366
Bst6I	CTCTTC	2 cut(s)	1605, 1614
BstAPI	GCANNNNNTGC	1 cut(s)	2042
BstBAI	YACGTR	1 cut(s)	827
BstC8I	GCNNGC	5 cut(s)	505, 1222, 1435, 1626, 2047
BstDSI	CCRYGG	1 cut(s)	149
BstENI	CCTNNNNNAGG	1 cut(s)	893
BstF5I	GGATG	2 cut(s)	1763, 1948
BstFNI	CGCG	3 cut(s)	127, 1413, 1699
BstH2I	RGCGCY	1 cut(s)	1270
BstHHI	GCGC	2 cut(s)	1269, 1701
BstMAI	GTCTC	3 cut(s)	592, 943, 1566
BstMWI	GCNNNNNNNGC	9 cut(s)	578, 761, 1505, 1658, 1760, 1814, 2021, 2033, 2042
BstNI	CCWGG	4 cut(s)	728, 804, 1714, 1903
BstNSI	RCATGY	2 cut(s)	194, 1383
BstPAI	GACNNNNGTC	1 cut(s)	2145
BstSCI	CCNGG	5 cut(s)	524, 726, 802, 1712, 1901
BstSLI	GKGCMC	1 cut(s)	1810
BstSNI	TACGTA	1 cut(s)	827
BstUI	CGCG	3 cut(s)	127, 1413, 1699
BstV1I	GCAGC	9 cut(s)	148, 512, 559, 1199, 1219, 1318, 1766, 1910, 2011
BstV2I	GAAGAC	3 cut(s)	572, 1827, 1976
BstX2I	RGATCY	3 cut(s)	225, 296, 853
BstXI	CCANNNNNNTGG	1 cut(s)	664
BstYI	RGATCY	3 cut(s)	225, 296, 853
BsuRI	GGCC	2 cut(s)	767, 1595
BtgI	CCRYGG	1 cut(s)	149
BtgZI	GCGATG	2 cut(s)	360, 1394
BtrI	CACGTC	1 cut(s)	443
BtsCI	GGATG	2 cut(s)	1763, 1948
BtsIMutI	CAGTG	4 cut(s)	370, 1065, 1177, 1810
BtuMI	TCGCGA	1 cut(s)	127
Cac8I	GCNNGC	5 cut(s)	505, 1222, 1435, 1626, 2047
CaiI	CAGNNNCTG	2 cut(s)	2045, 2128
CfoI	GCGC	2 cut(s)	1269, 1701
Cfr13I	GGNCC	1 cut(s)	2125
CseI	GACGC	2 cut(s)	390, 816
CsiI	ACCWGGT	1 cut(s)	1712
Csp6I	GTAC	8 cut(s)	166, 285, 623, 1025, 1176, 1422, 2085, 2224
CspCI	CAANNNNNGTGG	2 cut(s)	1308, 1343
CviAII	CATG	6 cut(s)	150, 191, 958, 1244, 1380, 2143
CviQI	GTAC	8 cut(s)	166, 285, 623, 1025, 1176, 1422, 2085, 2224
DraI	TTTAAA	2 cut(s)	1228, 1488
DriI	GACNNNNNGTC	2 cut(s)	373, 400
EaeI	YGGCCR	1 cut(s)	1593
Eam1104I	CTCTTC	2 cut(s)	1605, 1614
Eam1105I	GACNNNNNGTC	2 cut(s)	373, 400
EarI	CTCTTC	2 cut(s)	1605, 1614
Ecl136II	GAGCTC	1 cut(s)	430
Eco105I	TACGTA	1 cut(s)	827
Eco130I	CCWWGG	1 cut(s)	149
Eco24I	GRGCYC	2 cut(s)	27, 432
Eco31I	GGTCTC	1 cut(s)	1566
Eco32I	GATATC	2 cut(s)	715, 787
Eco47I	GGWCC	1 cut(s)	2125
Eco53kI	GAGCTC	1 cut(s)	430
Eco57I	CTGAAG	2 cut(s)	1002, 1839
EcoICRI	GAGCTC	1 cut(s)	430
EcoNI	CCTNNNNNAGG	1 cut(s)	893
EcoO109I	RGGNCCY	1 cut(s)	2125
EcoRII	CCWGG	4 cut(s)	726, 802, 1712, 1901
EcoRV	GATATC	2 cut(s)	715, 787
EcoT14I	CCWWGG	1 cut(s)	149
EcoT22I	ATGCAT	2 cut(s)	1279, 1381
EcoT38I	GRGCYC	2 cut(s)	27, 432
ErhI	CCWWGG	1 cut(s)	149
FaeI	CATG	6 cut(s)	153, 194, 961, 1247, 1383, 2146
FaqI	GGGAC	2 cut(s)	167, 239
FatI	CATG	6 cut(s)	149, 190, 957, 1243, 1379, 2142
FauI	CCCGC	2 cut(s)	612, 1842
FbaI	TGATCA	1 cut(s)	1161
FokI	GGATG	2 cut(s)	1750, 1955
FriOI	GRGCYC	2 cut(s)	27, 432
FspBI	CTAG	4 cut(s)	288, 1271, 2067, 2079
GlaI	GCGC	2 cut(s)	1268, 1700
GsaI	CCCAGC	1 cut(s)	656
GsuI	CTGGAG	1 cut(s)	614
HaeII	RGCGCY	1 cut(s)	1270
HaeIII	GGCC	2 cut(s)	767, 1595
HapII	CCGG	3 cut(s)	294, 525, 2181
HgaI	GACGC	2 cut(s)	390, 816
HhaI	GCGC	2 cut(s)	1269, 1701
Hin1II	CATG	6 cut(s)	153, 194, 961, 1247, 1383, 2146
Hin6I	GCGC	2 cut(s)	1267, 1699
HinP1I	GCGC	2 cut(s)	1267, 1699
HinfI	GANTC	8 cut(s)	302, 487, 636, 916, 928, 1525, 2102, 2146
HpaII	CCGG	3 cut(s)	294, 525, 2181
Hpy166II	GTNNAC	2 cut(s)	708, 1340
Hpy8I	GTNNAC	2 cut(s)	708, 1340
Hpy99I	CGWCG	7 cut(s)	38, 201, 218, 281, 406, 1095, 2007
HpyAV	CCTTC	9 cut(s)	104, 335, 1053, 1436, 1744, 1878, 1957, 2014, 2026
HpyCH4III	ACNGT	3 cut(s)	178, 371, 1366
HpyCH4IV	ACGT	3 cut(s)	442, 826, 1054
HpyF10VI	GCNNNNNNNGC	9 cut(s)	578, 761, 1505, 1658, 1760, 1814, 2021, 2033, 2042
HpySE526I	ACGT	3 cut(s)	442, 826, 1054
Hsp92II	CATG	6 cut(s)	153, 194, 961, 1247, 1383, 2146
HspAI	GCGC	2 cut(s)	1267, 1699
Kpn2I	TCCGGA	1 cut(s)	293
KpnI	GGTACC	1 cut(s)	626
Ksp22I	TGATCA	1 cut(s)	1161
LguI	GCTCTTC	1 cut(s)	1614
LmnI	GCTCC	7 cut(s)	10, 296, 398, 427, 1301, 1852, 2177
Lsp1109I	GCAGC	9 cut(s)	148, 512, 559, 1199, 1219, 1318, 1766, 1910, 2011
LweI	GCATC	6 cut(s)	40, 340, 1264, 1772, 2032, 2109
MabI	ACCWGGT	1 cut(s)	1712
MaeI	CTAG	4 cut(s)	288, 1271, 2067, 2079
MaeII	ACGT	3 cut(s)	442, 826, 1054
MaeIII	GTNAC	7 cut(s)	365, 438, 1060, 1388, 1453, 1462, 1720
MflI	RGATCY	3 cut(s)	225, 296, 853
MhlI	GDGCHC	3 cut(s)	27, 432, 1810
MlyI	GAGTC	6 cut(s)	311, 481, 645, 1534, 2111, 2155
MmeI	TCCRAC	5 cut(s)	300, 330, 715, 880, 1920
Mph1103I	ATGCAT	2 cut(s)	1279, 1381
MroI	TCCGGA	1 cut(s)	293
MseI	TTAA	5 cut(s)	408, 749, 1227, 1487, 2208
MslI	CAYNNNNRTG	1 cut(s)	1683
MspA1I	CMGCKG	2 cut(s)	572, 1037
MspI	CCGG	3 cut(s)	294, 525, 2181
MspR9I	CCNGG	5 cut(s)	526, 728, 804, 1714, 1903
Mva1269I	GAATGC	2 cut(s)	1101, 1983
MvaI	CCWGG	4 cut(s)	728, 804, 1714, 1903
MvnI	CGCG	3 cut(s)	127, 1413, 1699
MwoI	GCNNNNNNNGC	9 cut(s)	578, 761, 1505, 1658, 1760, 1814, 2021, 2033, 2042
NciI	CCSGG	1 cut(s)	526
NcoI	CCATGG	1 cut(s)	149
NlaIII	CATG	6 cut(s)	153, 194, 961, 1247, 1383, 2146
NlaIV	GGNNCC	4 cut(s)	6, 298, 624, 2179
NmuCI	GTSAC	5 cut(s)	365, 438, 1060, 1388, 1462
NruI	TCGCGA	1 cut(s)	127
NsiI	ATGCAT	2 cut(s)	1279, 1381
NspI	RCATGY	2 cut(s)	194, 1383
PciSI	GCTCTTC	1 cut(s)	1614
PcsI	WCGNNNNNNNCGW	2 cut(s)	1096, 1417
PctI	GAATGC	2 cut(s)	1101, 1983
PfeI	GAWTC	2 cut(s)	916, 928
PfoI	TCCNGGA	1 cut(s)	802
PleI	GAGTC	6 cut(s)	310, 481, 644, 1533, 2110, 2154
PpsI	GAGTC	6 cut(s)	310, 481, 644, 1533, 2110, 2154
Ppu21I	YACGTR	1 cut(s)	827
PpuMI	RGGWCCY	1 cut(s)	2125
PshAI	GACNNNNGTC	1 cut(s)	2145
PsiI	TTATAA	2 cut(s)	324, 1370
Psp124BI	GAGCTC	1 cut(s)	432
Psp5II	RGGWCCY	1 cut(s)	2125
Psp6I	CCWGG	4 cut(s)	726, 802, 1712, 1901
PspFI	CCCAGC	1 cut(s)	652
PspGI	CCWGG	4 cut(s)	726, 802, 1712, 1901
PspN4I	GGNNCC	4 cut(s)	6, 298, 624, 2179
PspPI	GGNCC	1 cut(s)	2125
PspPPI	RGGWCCY	1 cut(s)	2125
PstNI	CAGNNNCTG	2 cut(s)	2045, 2128
PsuI	RGATCY	3 cut(s)	225, 296, 853
PvuII	CAGCTG	1 cut(s)	1037
RruI	TCGCGA	1 cut(s)	127
RsaI	GTAC	8 cut(s)	167, 286, 624, 1026, 1177, 1423, 2086, 2225
RsaNI	GTAC	8 cut(s)	166, 285, 623, 1025, 1176, 1422, 2085, 2224
RseI	CAYNNNNRTG	1 cut(s)	1683
SacI	GAGCTC	1 cut(s)	432
SapI	GCTCTTC	1 cut(s)	1614
SaqAI	TTAA	5 cut(s)	408, 749, 1227, 1487, 2208
Sau96I	GGNCC	1 cut(s)	2125
ScaI	AGTACT	1 cut(s)	2086
SchI	GAGTC	6 cut(s)	311, 481, 645, 1534, 2111, 2155
ScrFI	CCNGG	5 cut(s)	526, 728, 804, 1714, 1903
SduI	GDGCHC	3 cut(s)	27, 432, 1810
SexAI	ACCWGGT	1 cut(s)	1712
SfaNI	GCATC	6 cut(s)	40, 340, 1264, 1772, 2032, 2109
SinI	GGWCC	1 cut(s)	2125
SmiMI	CAYNNNNRTG	1 cut(s)	1683
SmlI	CTYRAG	2 cut(s)	769, 1257
SmoI	CTYRAG	2 cut(s)	769, 1257
SnaBI	TACGTA	1 cut(s)	827
SsiI	CCGC	7 cut(s)	570, 619, 764, 1596, 1849, 2090, 2230
SspI	AATATT	1 cut(s)	44
SspMI	CTAG	4 cut(s)	288, 1271, 2067, 2079
SstI	GAGCTC	1 cut(s)	432
StyD4I	CCNGG	5 cut(s)	524, 726, 802, 1712, 1901
StyI	CCWWGG	1 cut(s)	149
TaaI	ACNGT	3 cut(s)	178, 371, 1366
TaiI	ACGT	3 cut(s)	445, 829, 1057
TaqI	TCGA	4 cut(s)	21, 199, 216, 1528
TaqII	GACCGA	1 cut(s)	1491
TatI	WGTACW	1 cut(s)	2084
TauI	GCSGC	2 cut(s)	767, 1598
TfiI	GAWTC	2 cut(s)	916, 928
Tru1I	TTAA	5 cut(s)	408, 749, 1227, 1487, 2208
Tru9I	TTAA	5 cut(s)	408, 749, 1227, 1487, 2208
TscAI	CASTG	4 cut(s)	370, 1065, 1177, 1810
TseFI	GTSAC	5 cut(s)	365, 438, 1060, 1388, 1462
TseI	GCWGC	9 cut(s)	161, 500, 572, 1187, 1232, 1331, 1754, 1898, 2024
Tsp45I	GTSAC	5 cut(s)	365, 438, 1060, 1388, 1462
TspGWI	ACGGA	3 cut(s)	202, 241, 411
TspRI	CASTG	4 cut(s)	370, 1065, 1177, 1810
VpaK11BI	GGWCC	1 cut(s)	2125
XagI	CCTNNNNNAGG	1 cut(s)	893
XapI	RAATTY	4 cut(s)	415, 1689, 1864, 2200
XceI	RCATGY	2 cut(s)	194, 1383
XspI	CTAG	4 cut(s)	288, 1271, 2067, 2079
ZrmI	AGTACT	1 cut(s)	2086
Zsp2I	ATGCAT	2 cut(s)	1279, 1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.