Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007181

Physical Location & Seq

Genomic Coordinates Forward (+)

12741032 .. 12744670

Gene Structure 3639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G24690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGAGTCTACTGCTAACGCACTCGTCGTCAAGGTGAGCTATGGAGGTGTGCTTAGGCGTTTCAGGGTGCCTGTTAAAGCTAATGGACAGCTTGATCTTGAAATGGCTGGTCTTAAGGAAAAGATCGCTGCTCTCTTTAACCTCTCTGCGGATGCTGAATTGAGTCTGACTTACTCTGATGAGGATGGGGATGTGGTTGCCCTTGTTGATGACAACGATCTCTTTGATGTTACTAATCAGCGTCTTAAGTTCTTAAAGATCAATGTGAACGCTGGCGTGTCCACTAACTCTGCTGCTCCAGAGAGTAGTGGGAGTTCCACACCTGCGGGTATGCCTAACCCGGTTTCCAAAATCCAGAAGGGTATAAATGATGTTCTGATGGCTGTACCTAACCCGATGCGTGATACCATATCAAAGGTGTACATGGACCTTGCATCCAAGGCCTCAACTTCTAGTCCTGTAGTTGGTGAGATGCTTGATTGCATTTCCAAGCTAGGGCAGCTCTCAATTCCTCAGGAAAGTAGTCCTTGCTCACCTGTTACCAAGCCTGGTTCTTCAGGTGCTTCCCTGAGCAGGGATGTTCCTTCCGCTGGTGGAAAGAAGGATATCTCTGAGAGGACCCAGACCGGAAGGAAACCTGTTAATCTGAATGAACCCACTGGCGCTCATTCAAAGACTTCTGGTCATGTACCAAACTCGTCTGGACTGGGTGCTAATTTCAACGAGTGTCCCTTTAGTGGCAGTACCATGAATTACTCCTGTCCAAATCCAGTTAACCTCAACAAGCATCCTCGTCGTGTTTGTCATTCCAAAAAGAGCACCAATGGTGATTACTGGACTTCATTGGGTGTATTCCATAAGGGCATCCGTTGTGACGGATGTGGAGTTCTTCCAATTACTGGGCCTAGATTTAAGTCGAAAGTTAAAGAAGACTATGATCTGTGCACCATCTGCTATTCGGTGATGGGTAACGAGGGGGATTACACAAGAATGGATAAGCCTGTATCCGTTCAACATCTGCATCCTTTTAGAGGACCGTTTACCCAATTTCCTAATCCTTGGTTGAGCCACCCTGTGCCACGAGCAACCAATGGAGGTGCACCTCTCAGGTGTACTCGCCCTAAACTAGACAGTCGGTTTGTCCTTGATGTGAATGTAATTGATGGAACCGTTGTTGCTCCATCCGCCCCATTTACTAAGATTTGGAAAATGAGGAACAGTGGTTCGCTGGTGTGGCCACAGGGCACACAGATTGTCTGGATCGGTGGGGACAGGTTCTGCAACTCCTTGTCAGTTGATTTACAGATTCCAAAGGAGGGTGTGCCTATCTATAGTGAACTTGACGTCAAAGTTGATTTTGTTGCACCAGAGTTACCTGGTCGATACATTTCTTATTGGAGGATGGCTACCTCTGACGGTGCTAAGTTTGGGCAACGTGTTTGGGTGTTGATACATGTTGATGCATCTCTGAAGAATTCTGTTGTGAATGAGTTTCATGGACTGAACCTTAATGCCTCCCCCTCCCTTGATGAGAATTTTCCAAGCGAATTTCTAGGGATTATGAATTATGAGTCAGCTCAACCTGGCAGCTCCAGTGTCAATCCTGGGACCGTGAAAGGTACTGATCTAGAGGGCGAAGTTGGTGAAACACAGGCCGTGGAAAAAGAAAACCTTTTGGTTGGTGAAGCTCATCCTGCTATCCCTCACGGTCATTCTCCTTCATCTTCATCTTCTTCATTTAACATGGTCGACTTCCCAAGCATGCCTGCTGTTGAGGTCTTGTCTGGTGGTTCTTCATCTACTACAAAAGACGTGCCAGTTCCTCTTCAGGAGGATATAGAAAAGAATGACGTGGAGATAACCATGCTCAAGGAGCTCGAGGAAATGGGTTTCAAGGAGATAGATTTGAACAAGGAGATCTTGAGGGATAACGAGTACAACCTGGAGCAGTCTGTTGATGCTCTTTGTGGAGTTAGCGAGTGGGATCCAATCCTAGAGGAGCTTCAGGAGATGGGCTTCTGTGATGATGTGACGAACAAGAGACTGCTGAAGAAGAACAATGGAAGCATCAAAGGCGTGGTAATGGATCTCCTCACAGGGGAGAAGGAGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005773 GO:0005829 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012505 GO:0016043 GO:0016236 GO:0022607 GO:0031410 GO:0031982 GO:0032182 GO:0034622 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0051258 GO:0051259 GO:0061919 GO:0065003 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

N_BRCA1_IG PB1 ZZ

Protein Analysis

704

Amino Acids

76.19

Weight (kDa)

5.32

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1	PF00564	9 - 89	1.2e-09	PB1 domain
ZZ	PF00569	286 - 321	1.3e-07	Zinc finger, ZZ type
N_BRCA1_IG	PF16158	385 - 486	1.9e-31	Ig-like domain from next to BRCA1 gene
UBA_NBR1_C	PF24932	620 - 658	2.5e-22	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain
UBA_NBR1_C	PF24932	661 - 698	1.6e-07	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24690
fragaria_vesca	FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270
malus_domestica	MD06G1165900.v1.1 MD14G1171800.v1.1
prunus_persica	Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1
pyrus_communis	pycom06g14840 pycom14g14340
rosa_chinensis	RchiOBHm_Chr7g0192591
rosa_laevigata	RLG00000004349
rosa_multiflora	Rmu_sc0003108.1_g000043
rosa_roxburghii	Rroxscaffold_3G00262920
rosa_rugosa	Rorug07G0002500
rosa_samantha	Rh7AG126900 Rh7BG129200 Rh7CG131000 Rh7DG130300
rosa_wichuraiana	Rw7G010910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	331
AatII	GACGTC	1 cut(s)	1347
Acc36I	ACCTGC	1 cut(s)	331
AccB1I	GGYRCC	1 cut(s)	67
AccB7I	CCANNNNNTGG	1 cut(s)	899
AccI	GTMKAC	2 cut(s)	8, 1749
AciI	CCGC	4 cut(s)	149, 326, 588, 1185
AclWI	GGATC	4 cut(s)	1268, 1979, 1992, 2094
AcoI	YGGCCR	1 cut(s)	1235
AcsI	RAATTY	3 cut(s)	1474, 1534, 1547
AcuI	CTGAAG	5 cut(s)	540, 1490, 1811, 1988, 2069
AcyI	GRCGYC	1 cut(s)	1344
AdeI	CACNNNGTG	1 cut(s)	1075
AfaI	GTAC	7 cut(s)	387, 422, 690, 745, 1114, 1621, 1937
AflII	CTTAAG	2 cut(s)	113, 245
AflIII	ACRYGT	2 cut(s)	1435, 1453
AgsI	TTSAA	6 cut(s)	101, 672, 721, 1013, 1894, 1909
AhdI	GACNNNNNGTC	1 cut(s)	681
AjiI	CACGTC	2 cut(s)	1813, 1852
AjnI	CCWGG	5 cut(s)	547, 1375, 1582, 1603, 1941
AloI	GAACNNNNNNTCC	4 cut(s)	870, 902, 1207, 1239
Alw21I	GWGCWC	4 cut(s)	821, 947, 1102, 1878
Alw26I	GTCTC	1 cut(s)	2035
Alw44I	GTGCAC	2 cut(s)	943, 1098
AlwI	GGATC	4 cut(s)	1268, 1979, 1992, 2094
AlwNI	CAGNNNCTG	1 cut(s)	1278
Ama87I	CYCGRG	1 cut(s)	1877
AoxI	GGCC	4 cut(s)	441, 902, 1235, 1653
ApaLI	GTGCAC	2 cut(s)	943, 1098
ApeKI	GCWGC	4 cut(s)	128, 293, 499, 1587
ApoI	RAATTY	3 cut(s)	1474, 1534, 1547
ArsI	GACNNNNNNTTYG	2 cut(s)	1121, 1153
AspLEI	GCGC	1 cut(s)	665
AspS9I	GGNCC	5 cut(s)	427, 618, 902, 1034, 1608
AsuC2I	CCSGG	1 cut(s)	341
AsuHPI	GGTGA	7 cut(s)	46, 479, 525, 839, 973, 1655, 1694
AvaI	CYCGRG	1 cut(s)	1877
AvaII	GGWCC	4 cut(s)	427, 618, 1034, 1608
AxyI	CCTNAGG	1 cut(s)	513
BaeGI	GKGCMC	3 cut(s)	947, 1102, 1247
BalI	TGGCCA	1 cut(s)	1237
BamHI	GGATCC	1 cut(s)	1984
BanI	GGYRCC	1 cut(s)	67
BanII	GRGCYC	1 cut(s)	1878
BauI	CACGAG	1 cut(s)	1080
BbsI	GAAGAC	1 cut(s)	936
Bbv12I	GWGCWC	4 cut(s)	821, 947, 1102, 1878
BbvI	GCAGC	4 cut(s)	115, 280, 511, 1599
BccI	CCATC	8 cut(s)	179, 373, 956, 958, 1157, 1189, 1396, 2005
BceAI	ACGGC	1 cut(s)	1640
BcgI	CGANNNNNNTGC	2 cut(s)	776, 810
BciT130I	CCWGG	5 cut(s)	549, 1377, 1584, 1605, 1943
BciVI	GTATCC	1 cut(s)	1015
BcnI	CCSGG	1 cut(s)	341
BcoDI	GTCTC	1 cut(s)	2035
BfaI	CTAG	7 cut(s)	453, 494, 906, 1127, 1553, 1628, 1994
BfmI	CTRYAG	2 cut(s)	459, 1330
BfoI	RGCGCY	1 cut(s)	666
BfrI	CTTAAG	2 cut(s)	113, 245
BfuAI	ACCTGC	1 cut(s)	331
BfuI	GTATCC	1 cut(s)	1015
BglII	AGATCT	1 cut(s)	1917
BisI	GCNGC	4 cut(s)	129, 294, 500, 1588
BlsI	GCNGC	4 cut(s)	130, 295, 501, 1589
Bme1390I	CCNGG	6 cut(s)	341, 549, 1377, 1584, 1605, 1943
Bme18I	GGWCC	4 cut(s)	427, 618, 1034, 1608
BmeRI	GACNNNNNGTC	1 cut(s)	681
BmeT110I	CYCGRG	1 cut(s)	1877
BmgBI	CACGTC	2 cut(s)	1813, 1852
BmgT120I	GGNCC	5 cut(s)	427, 618, 902, 1034, 1608
BmiI	GGNNCC	5 cut(s)	69, 620, 1168, 1609, 1986
BmrFI	CCNGG	6 cut(s)	341, 549, 1377, 1584, 1605, 1943
BmrI	ACTGGG	2 cut(s)	716, 909
BmuI	ACTGGG	2 cut(s)	716, 909
BpiI	GAAGAC	1 cut(s)	936
BpmI	CTGGAG	3 cut(s)	282, 1576, 1964
Bpu10I	CCTNAGC	2 cut(s)	53, 569
BpuEI	CTTGAG	2 cut(s)	1853, 1942
BpuMI	CCSGG	1 cut(s)	341
BsaHI	GRCGYC	1 cut(s)	1344
BsaJI	CCNNGG	4 cut(s)	438, 1058, 1604, 1656
BsaWI	WCCGGW	1 cut(s)	626
Bse1I	ACTGG	7 cut(s)	664, 711, 770, 839, 904, 1593, 1817
Bse21I	CCTNAGG	1 cut(s)	513
BseBI	CCWGG	5 cut(s)	549, 1377, 1584, 1605, 1943
BseDI	CCNNGG	4 cut(s)	438, 1058, 1604, 1656
BseMII	CTCAG	4 cut(s)	527, 560, 603, 1120
BseNI	ACTGG	7 cut(s)	664, 711, 770, 839, 904, 1593, 1817
BseRI	GAGGAG	2 cut(s)	2012, 2081
BseSI	GKGCMC	3 cut(s)	947, 1102, 1247
BseXI	GCAGC	4 cut(s)	115, 280, 511, 1599
BshFI	GGCC	4 cut(s)	443, 904, 1237, 1655
BshNI	GGYRCC	1 cut(s)	67
BsiHKAI	GWGCWC	4 cut(s)	821, 947, 1102, 1878
BsiHKCI	CYCGRG	1 cut(s)	1877
BsiSI	CCGG	2 cut(s)	341, 627
BslFI	GGGAC	3 cut(s)	714, 1283, 1621
BsmAI	GTCTC	1 cut(s)	2035
BsmFI	GGGAC	3 cut(s)	714, 1283, 1621
BsnI	GGCC	4 cut(s)	443, 904, 1237, 1655
BsoBI	CYCGRG	1 cut(s)	1877
Bsp1286I	GDGCHC	5 cut(s)	821, 947, 1102, 1247, 1878
Bsp1407I	TGTACA	1 cut(s)	420
BspACI	CCGC	4 cut(s)	149, 326, 588, 1185
BspANI	GGCC	4 cut(s)	443, 904, 1237, 1655
BspCNI	CTCAG	4 cut(s)	526, 561, 604, 1119
BspLI	GGNNCC	5 cut(s)	69, 620, 1168, 1609, 1986
BspMI	ACCTGC	1 cut(s)	331
BspPI	GGATC	4 cut(s)	1268, 1979, 1992, 2094
BspT107I	GGYRCC	1 cut(s)	67
BspTI	CTTAAG	2 cut(s)	113, 245
BsrGI	TGTACA	1 cut(s)	420
BsrI	ACTGG	7 cut(s)	664, 711, 770, 839, 904, 1593, 1817
BssECI	CCNNGG	4 cut(s)	438, 1058, 1604, 1656
BssNI	GRCGYC	1 cut(s)	1344
BssSI	CACGAG	1 cut(s)	1080
BssT1I	CCWWGG	2 cut(s)	438, 1058
Bst2BI	CACGAG	1 cut(s)	1080
Bst2UI	CCWGG	5 cut(s)	549, 1377, 1584, 1605, 1943
Bst4CI	ACNGT	7 cut(s)	1038, 1133, 1171, 1220, 1418, 1612, 1709
Bst6I	CTCTTC	1 cut(s)	1830
BstACI	GRCGYC	1 cut(s)	1344
BstAFI	CTTAAG	2 cut(s)	113, 245
BstAPI	GCANNNNNTGC	1 cut(s)	951
BstAUI	TGTACA	1 cut(s)	420
BstC8I	GCNNGC	3 cut(s)	274, 1763, 1767
BstDEI	CTNAG	7 cut(s)	53, 513, 569, 612, 1106, 1197, 1422
BstDSI	CCRYGG	1 cut(s)	1656
BstENI	CCTNNNNNAGG	1 cut(s)	1029
BstH2I	RGCGCY	1 cut(s)	666
BstHHI	GCGC	1 cut(s)	665
BstMAI	GTCTC	1 cut(s)	2035
BstMWI	GCNNNNNNNGC	8 cut(s)	440, 499, 951, 1184, 1234, 1694, 1873, 2073
BstNI	CCWGG	5 cut(s)	549, 1377, 1584, 1605, 1943
BstNSI	RCATGY	2 cut(s)	1457, 1765
BstSCI	CCNGG	6 cut(s)	339, 547, 1375, 1582, 1603, 1941
BstSFI	CTRYAG	2 cut(s)	459, 1330
BstSLI	GKGCMC	3 cut(s)	947, 1102, 1247
BstV1I	GCAGC	4 cut(s)	115, 280, 511, 1599
BstV2I	GAAGAC	1 cut(s)	936
BstX2I	RGATCY	3 cut(s)	1917, 1984, 2086
BstYI	RGATCY	3 cut(s)	1917, 1984, 2086
Bsu36I	CCTNAGG	1 cut(s)	513
BsuI	GTATCC	1 cut(s)	1015
BsuRI	GGCC	4 cut(s)	443, 904, 1237, 1655
BtgI	CCRYGG	1 cut(s)	1656
BtrI	CACGTC	2 cut(s)	1813, 1852
BtsIMutI	CAGTG	3 cut(s)	657, 1225, 1600
BveI	ACCTGC	1 cut(s)	331
Cac8I	GCNNGC	3 cut(s)	274, 1763, 1767
CaiI	CAGNNNCTG	1 cut(s)	1278
CfoI	GCGC	1 cut(s)	665
Cfr13I	GGNCC	5 cut(s)	427, 618, 902, 1034, 1608
CseI	GACGC	1 cut(s)	230
CsiI	ACCWGGT	1 cut(s)	1375
Csp6I	GTAC	7 cut(s)	386, 421, 689, 744, 1113, 1620, 1936
CviAII	CATG	8 cut(s)	424, 686, 748, 1454, 1496, 1744, 1762, 1864
CviQI	GTAC	7 cut(s)	386, 421, 689, 744, 1113, 1620, 1936
DdeI	CTNAG	7 cut(s)	53, 513, 569, 612, 1106, 1197, 1422
DraIII	CACNNNGTG	1 cut(s)	1075
DriI	GACNNNNNGTC	1 cut(s)	681
EaeI	YGGCCR	1 cut(s)	1235
Eam1104I	CTCTTC	1 cut(s)	1830
Eam1105I	GACNNNNNGTC	1 cut(s)	681
EarI	CTCTTC	1 cut(s)	1830
EciI	GGCGGA	1 cut(s)	1174
Ecl136II	GAGCTC	1 cut(s)	1876
Eco130I	CCWWGG	2 cut(s)	438, 1058
Eco147I	AGGCCT	1 cut(s)	443
Eco24I	GRGCYC	1 cut(s)	1878
Eco32I	GATATC	1 cut(s)	607
Eco47I	GGWCC	4 cut(s)	427, 618, 1034, 1608
Eco53kI	GAGCTC	1 cut(s)	1876
Eco57I	CTGAAG	5 cut(s)	540, 1490, 1811, 1988, 2069
Eco81I	CCTNAGG	1 cut(s)	513
Eco88I	CYCGRG	1 cut(s)	1877
EcoICRI	GAGCTC	1 cut(s)	1876
EcoNI	CCTNNNNNAGG	1 cut(s)	1029
EcoO109I	RGGNCCY	1 cut(s)	618
EcoRI	GAATTC	1 cut(s)	1474
EcoRII	CCWGG	5 cut(s)	547, 1375, 1582, 1603, 1941
EcoRV	GATATC	1 cut(s)	607
EcoT14I	CCWWGG	2 cut(s)	438, 1058
EcoT22I	ATGCAT	1 cut(s)	1465
EcoT38I	GRGCYC	1 cut(s)	1878
ErhI	CCWWGG	2 cut(s)	438, 1058
FaeI	CATG	8 cut(s)	427, 689, 751, 1457, 1499, 1747, 1765, 1867
FalI	AAGNNNNNCTT	6 cut(s)	511, 543, 1656, 1688, 1904, 1936
FaqI	GGGAC	3 cut(s)	714, 1283, 1621
FatI	CATG	8 cut(s)	423, 685, 747, 1453, 1495, 1743, 1761, 1863
FauI	CCCGC	1 cut(s)	319
FblI	GTMKAC	2 cut(s)	8, 1749
Fnu4HI	GCNGC	4 cut(s)	129, 294, 500, 1588
FriOI	GRGCYC	1 cut(s)	1878
Fsp4HI	GCNGC	4 cut(s)	129, 294, 500, 1588
FspBI	CTAG	7 cut(s)	453, 494, 906, 1127, 1553, 1628, 1994
GlaI	GCGC	1 cut(s)	664
GluI	GCNGC	4 cut(s)	129, 294, 500, 1588
GsuI	CTGGAG	3 cut(s)	282, 1576, 1964
HaeII	RGCGCY	1 cut(s)	666
HaeIII	GGCC	4 cut(s)	443, 904, 1237, 1655
HapII	CCGG	2 cut(s)	341, 627
HgaI	GACGC	1 cut(s)	230
HhaI	GCGC	1 cut(s)	665
Hin1I	GRCGYC	1 cut(s)	1344
Hin1II	CATG	8 cut(s)	427, 689, 751, 1457, 1499, 1747, 1765, 1867
Hin6I	GCGC	1 cut(s)	663
HinP1I	GCGC	1 cut(s)	663
HincII	GTYRAC	2 cut(s)	775, 1750
HindII	GTYRAC	2 cut(s)	775, 1750
HinfI	GANTC	4 cut(s)	5, 163, 1306, 1571
HpaI	GTTAAC	1 cut(s)	775
HpaII	CCGG	2 cut(s)	341, 627
HphI	GGTGA	7 cut(s)	46, 479, 525, 839, 973, 1655, 1694
Hpy188I	TCNGA	7 cut(s)	168, 178, 378, 613, 648, 1414, 1470
Hpy99I	CGWCG	2 cut(s)	29, 798
HpyAV	CCTTC	6 cut(s)	352, 594, 595, 624, 1728, 2098
HpyCH4III	ACNGT	7 cut(s)	1038, 1133, 1171, 1220, 1418, 1612, 1709
HpyCH4IV	ACGT	4 cut(s)	1344, 1435, 1812, 1851
HpyCH4V	TGCA	8 cut(s)	434, 483, 945, 1021, 1100, 1281, 1364, 1463
HpyF10VI	GCNNNNNNNGC	8 cut(s)	440, 499, 951, 1184, 1234, 1694, 1873, 2073
HpyF3I	CTNAG	7 cut(s)	53, 513, 569, 612, 1106, 1197, 1422
HpySE526I	ACGT	4 cut(s)	1344, 1435, 1812, 1851
Hsp92I	GRCGYC	1 cut(s)	1344
Hsp92II	CATG	8 cut(s)	427, 689, 751, 1457, 1499, 1747, 1765, 1867
HspAI	GCGC	1 cut(s)	663
KspAI	GTTAAC	1 cut(s)	775
LmnI	GCTCC	6 cut(s)	301, 1183, 1595, 1873, 1945, 1999
Lsp1109I	GCAGC	4 cut(s)	115, 280, 511, 1599
MabI	ACCWGGT	1 cut(s)	1375
MaeI	CTAG	7 cut(s)	453, 494, 906, 1127, 1553, 1628, 1994
MaeII	ACGT	4 cut(s)	1344, 1435, 1812, 1851
MaeIII	GTNAC	6 cut(s)	229, 538, 872, 968, 1371, 2029
MflI	RGATCY	3 cut(s)	1917, 1984, 2086
MhlI	GDGCHC	5 cut(s)	821, 947, 1102, 1247, 1878
MlsI	TGGCCA	1 cut(s)	1237
MluNI	TGGCCA	1 cut(s)	1237
MlyI	GAGTC	3 cut(s)	14, 172, 1580
Mox20I	TGGCCA	1 cut(s)	1237
Mph1103I	ATGCAT	1 cut(s)	1465
MscI	TGGCCA	1 cut(s)	1237
MslI	CAYNNNNRTG	2 cut(s)	989, 1458
Msp20I	TGGCCA	1 cut(s)	1237
MspA1I	CMGCKG	1 cut(s)	590
MspCI	CTTAAG	2 cut(s)	113, 245
MspI	CCGG	2 cut(s)	341, 627
MspR9I	CCNGG	6 cut(s)	341, 549, 1377, 1584, 1605, 1943
MvaI	CCWGG	5 cut(s)	549, 1377, 1584, 1605, 1943
MwoI	GCNNNNNNNGC	8 cut(s)	440, 499, 951, 1184, 1234, 1694, 1873, 2073
NciI	CCSGG	1 cut(s)	341
NlaIII	CATG	8 cut(s)	427, 689, 751, 1457, 1499, 1747, 1765, 1867
NlaIV	GGNNCC	5 cut(s)	69, 620, 1168, 1609, 1986
NmuCI	GTSAC	2 cut(s)	872, 2029
NsiI	ATGCAT	1 cut(s)	1465
NspI	RCATGY	2 cut(s)	1457, 1765
PaeI	GCATGC	1 cut(s)	1765
PaeR7I	CTCGAG	1 cut(s)	1877
PaqCI	CACCTGC	1 cut(s)	331
PceI	AGGCCT	1 cut(s)	443
PciI	ACATGT	1 cut(s)	1453
PcsI	WCGNNNNNNNCGW	1 cut(s)	24
PfeI	GAWTC	1 cut(s)	1306
PflMI	CCANNNNNTGG	1 cut(s)	899
PkrI	GCNGC	4 cut(s)	130, 295, 501, 1589
PleI	GAGTC	3 cut(s)	13, 171, 1579
PpsI	GAGTC	3 cut(s)	13, 171, 1579
PpuMI	RGGWCCY	1 cut(s)	618
PscI	ACATGT	1 cut(s)	1453
Psp124BI	GAGCTC	1 cut(s)	1878
Psp5II	RGGWCCY	1 cut(s)	618
Psp6I	CCWGG	5 cut(s)	547, 1375, 1582, 1603, 1941
PspGI	CCWGG	5 cut(s)	547, 1375, 1582, 1603, 1941
PspN4I	GGNNCC	5 cut(s)	69, 620, 1168, 1609, 1986
PspPI	GGNCC	5 cut(s)	427, 618, 902, 1034, 1608
PspPPI	RGGWCCY	1 cut(s)	618
PspXI	VCTCGAGB	1 cut(s)	1877
PsrI	GAACNNNNNNTAC	2 cut(s)	298, 330
PstNI	CAGNNNCTG	1 cut(s)	1278
PsuI	RGATCY	3 cut(s)	1917, 1984, 2086
RsaI	GTAC	7 cut(s)	387, 422, 690, 745, 1114, 1621, 1937
RsaNI	GTAC	7 cut(s)	386, 421, 689, 744, 1113, 1620, 1936
RseI	CAYNNNNRTG	2 cut(s)	989, 1458
SacI	GAGCTC	1 cut(s)	1878
SalI	GTCGAC	1 cut(s)	1748
SatI	GCNGC	4 cut(s)	129, 294, 500, 1588
Sau96I	GGNCC	5 cut(s)	427, 618, 902, 1034, 1608
SchI	GAGTC	3 cut(s)	14, 172, 1580
ScrFI	CCNGG	6 cut(s)	341, 549, 1377, 1584, 1605, 1943
SduI	GDGCHC	5 cut(s)	821, 947, 1102, 1247, 1878
SexAI	ACCWGGT	1 cut(s)	1375
SfcI	CTRYAG	2 cut(s)	459, 1330
Sfr274I	CTCGAG	1 cut(s)	1877
SinI	GGWCC	4 cut(s)	427, 618, 1034, 1608
SlaI	CTCGAG	1 cut(s)	1877
SmiMI	CAYNNNNRTG	2 cut(s)	989, 1458
SmlI	CTYRAG	5 cut(s)	113, 245, 1868, 1877, 1921
SmoI	CTYRAG	5 cut(s)	113, 245, 1868, 1877, 1921
SphI	GCATGC	1 cut(s)	1765
SseBI	AGGCCT	1 cut(s)	443
SsiI	CCGC	4 cut(s)	149, 326, 588, 1185
SspMI	CTAG	7 cut(s)	453, 494, 906, 1127, 1553, 1628, 1994
SstI	GAGCTC	1 cut(s)	1878
StuI	AGGCCT	1 cut(s)	443
StyD4I	CCNGG	6 cut(s)	339, 547, 1375, 1582, 1603, 1941
StyI	CCWWGG	2 cut(s)	438, 1058
TaaI	ACNGT	7 cut(s)	1038, 1133, 1171, 1220, 1418, 1612, 1709
TaiI	ACGT	4 cut(s)	1347, 1438, 1815, 1854
TaqI	TCGA	4 cut(s)	917, 1381, 1749, 1878
TatI	WGTACW	3 cut(s)	420, 1112, 1935
TfiI	GAWTC	1 cut(s)	1306
TscAI	CASTG	3 cut(s)	664, 1225, 1600
TseFI	GTSAC	2 cut(s)	872, 2029
TseI	GCWGC	4 cut(s)	128, 293, 499, 1587
Tsp45I	GTSAC	2 cut(s)	872, 2029
TspDTI	ATGAA	9 cut(s)	666, 764, 831, 1484, 1577, 1710, 1716, 1725, 1785
TspGWI	ACGGA	3 cut(s)	857, 891, 997
TspRI	CASTG	3 cut(s)	664, 1225, 1600
Van91I	CCANNNNNTGG	1 cut(s)	899
Vha464I	CTTAAG	2 cut(s)	113, 245
VneI	GTGCAC	2 cut(s)	943, 1098
VpaK11BI	GGWCC	4 cut(s)	427, 618, 1034, 1608
XagI	CCTNNNNNAGG	1 cut(s)	1029
XapI	RAATTY	3 cut(s)	1474, 1534, 1547
XbaI	TCTAGA	1 cut(s)	1627
XceI	RCATGY	2 cut(s)	1457, 1765
XhoI	CTCGAG	1 cut(s)	1877
XmiI	GTMKAC	2 cut(s)	8, 1749
XspI	CTAG	7 cut(s)	453, 494, 906, 1127, 1553, 1628, 1994
ZraI	GACGTC	1 cut(s)	1345
Zsp2I	ATGCAT	1 cut(s)	1465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.