RchiOBHm_Chr7g0192591

Ig-like domain from next to BRCA1 gene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0007181
Physical Location & Seq
Reverse (-)
11005875 .. 11010246
4372 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17216

Sequence Viewer

Length: 2319 bp
ATGGCTTCGTCTACTATGGTGATCAAGGTCAAATATGGGGATACACTGAGGCGTTTCAATGCTCGTGTTGATGAGAATGATCAACTGGATCTTGACATGGGTGGACTGCGGTTCAAAATATATAGTCTTTTCAATTTTCAGCTTGATGCTGACATCACTATGACCTATGTTGACGAAGATGGTGATATAGTGACTCTGGTTGATGATGAGGATTTGCGTGATGCTATGAAGCAGAATATGAAGTTCTTGAGGATTGATGTACATGATAAAACTGACAAATCTGAGAAATCTTATGCCAAATCAAGTGGAAGTTCTACCCCTGTAAGATATCCCTTGCCAGATATCACACCTGAGCCTATCCGTGAACTAATCTCCAGGGTTCCTCGAGACTTGACTCCAAATGCCCTTGGTCCAGGGTTTGCGGATCTCGTTGACTGCTTTTCGAAGATGGGAATGTCCTATTTACTTCAGGCTGGTGGAGTTTCAGGCGTCAAGAATGATTCCTCTGAGAAACCCTTAGCTCCATCTGCCAATGATATGAAGGACGATGGTAAGTCAGAAACCATCTTAAAGTCTACCACTGAGGAATCTAGCTCTAAAAACAGTCGGGCAAAGGATGCTGTAAATGTGACCAAGGATGTGGGAATGTCGAATCCACCTCAGAATGCTCCAGTTGATCTCAATGTTCTTCCTGCTGATTCTAATCCATCTGGACCCACACCCATCAATGTTACACCAGTTGGAGCAAGTCTTCATACTGCTGAGGAGAGGAAGGAGTCAGAGAAGGGAACCAGTGGTCAGGTCAAGGGCAAGTCTCTTGGTTGTGGTGGATCTACAAGTTCTGCTATCCCTGCATTGAATGTTAATGACATGAGCAATAATCATTTCAATCAATGTCCATTTTCAGAGACTCCTATTGTGAATGACTCGGCTCCTGTTGCATATCGTCGTCTTCATCCTTTTAAAAGGAATCATTCTGAAGCAATGGGTGGTATGTTCCACACTGGTGTTCGCTGTGATGGATGTGGTTGTCATCCAATAATTGGACCCCGGTTCAAGTCCATAGTGAAAGCAGATTATGACCTCTGCCGTATCTGTTTCTCGAGTATTGTTAATGTGGCTGAGTACATTAGAATTGACCACCCTTTGTCTTATCGCCATCCACGTCCTTTCAAGGGGATGCATGAACAACCTCCATGGCTGGGTCCTTCAGCATTGCCAAAGATACTGAGAAATTGTGGCGCGAAGCCTGGGCGACCTAAGCTTGACAGCCGCTTTGTTTTGGATGTCAACGTAATGGATGGTACCTTAATGGCCCCATCTACTCCATTTACCAAGATTTGGCGGATGCGCAACAATGGGGGTTTGATCTGGCCTAAAGGAACACAACTCATGTGGATTGGTGGAGACAGGTTTAGCAAATCAGATTCAGTTGAGATAGAGATTCCTGCGCATGGTGTATTGGCTGAAAATGAACTTGATATTGCTGTTGATTTTACTGCACCTGAGTCACCTGGACGGTACATCTCATATTGGAGGATGGCTTCTCCATCTGGTCAGAAGTTTGGGCAACGTGTTTGGGTTCTGATTCAGGTGGATACTTCCCTCAAGGATTCATTCTTTGAGAGCTTTCAAGGTTTGAACCTGAACCTGCCCCCTGAAAACGTGGTTAACTTTCCTGAGCAAATGAACTTTCCTCAGCAACATGTGGGCAGTGACTTTGTCCAGCCTTCTAGCTCTAACTCAGTGAAGGAACCAGCAATTCCCATTCCTGTCAAGCAGCCTGAAAATGAGCAGGATCTCAACTTCCCTATAAATGATAGCTTGCTGGTTGGCCACAGTATTCCTGCCCCTACTGCCCCTACTGCCCCGGTGGCTTCTGCAACTGTGTCATACCCCACTGTCGACCAGAGTGCTCCAGTCCCTACTGCACAAGTTGCCTCTTCAACTGTGACATACCCCACTGTTGATATATTTGAACCAGCCCCGCCCTCCCCCAGATCTTCCCCTGTTGTCACTCTACCAACATCATCTGAAGGGACCAGCTCAGAAAATCCTGTGGAGGACACCCTCCTTAAGGAGCTTGAGGACATGGGATTTAAGCAGGCGAATTTGAACAAGGAAATTCTGCGCAGGAATGAGTACAACCTGGAGCAATCTGTGGATGATCTCTGTGAGGTTGCTGAATGGGATCCTATTCTTGAAGAGCTGCAGGAAATGGGCTTCAGTGATACAGAGATGAACAAGAAGCTGCTTGCGAAGAACAATGGAAGCATCAAGCGTGTAGTCATGGATCTTATCAATGGGGACAAGCTGTAG

Protein Analysis

772

Amino Acids

84.7

Weight (kDa)

5.14

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 6 - 89 2.3e-09 PB1 domain
ZZ PF00569 334 - 369 7.8e-09 Zinc finger, ZZ type
N_BRCA1_IG PF16158 431 - 532 8.5e-33 Ig-like domain from next to BRCA1 gene
UBA_NBR1_C PF24932 688 - 727 8.2e-23 Next to BRCA1 gene 1 protein-like, C-terminal UBA domain
UBA_NBR1_C PF24932 730 - 767 4.1e-11 Next to BRCA1 gene 1 protein-like, C-terminal UBA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 3 cut(s) 1352, 1452, 2132
Acc36I ACCTGC 1 cut(s) 1659
Acc65I GGTACC 1 cut(s) 1304
AccB1I GGYRCC 1 cut(s) 1304
AccB7I CCANNNNNTGG 2 cut(s) 1043, 1341
AccI GTMKAC 3 cut(s) 11, 575, 1905
AccII CGCG 1 cut(s) 1244
AciI CCGC 5 cut(s) 109, 422, 1273, 1345, 1988
AclWI GGATC 7 cut(s) 96, 432, 838, 1806, 2186, 2199, 2301
AcoI YGGCCR 1 cut(s) 1834
AcsI RAATTY 2 cut(s) 2110, 2124
AcuI CTGAAG 5 cut(s) 452, 999, 1194, 2055, 2209
AcyI GRCGYC 1 cut(s) 489
AfaI GTAC 5 cut(s) 261, 1127, 1306, 1523, 2144
AfiI CCNNNNNNNGG 6 cut(s) 1043, 1175, 1202, 1341, 1454, 2077
AflII CTTAAG 1 cut(s) 2075
AflIII ACRYGT 2 cut(s) 1573, 1705
AjiI CACGTC 1 cut(s) 1166
AjnI CCWGG 5 cut(s) 374, 412, 1249, 1513, 2148
AleI CACNNNNGTG 1 cut(s) 1005
Alw21I GWGCWC 1 cut(s) 1918
Alw26I GTCTC 4 cut(s) 381, 819, 902, 1401
AlwI GGATC 7 cut(s) 96, 432, 838, 1806, 2186, 2199, 2301
Ama87I CYCGRG 2 cut(s) 384, 1102
AoxI GGCC 3 cut(s) 1314, 1373, 1834
ApeKI GCWGC 3 cut(s) 1780, 2209, 2251
ApoI RAATTY 2 cut(s) 2110, 2124
ArsI GACNNNNNNTTYG 2 cut(s) 1259, 1291
Asp718I GGTACC 1 cut(s) 1304
AspLEI GCGC 4 cut(s) 1244, 1353, 1453, 2133
AspS9I GGNCC 6 cut(s) 410, 713, 1046, 1205, 1315, 2040
AsuC2I CCSGG 2 cut(s) 1051, 1871
AsuHPI GGTGA 3 cut(s) 31, 194, 1503
AsuII TTCGAA 1 cut(s) 443
AvaI CYCGRG 2 cut(s) 384, 1102
AvaII GGWCC 5 cut(s) 410, 713, 1046, 1205, 2040
BalI TGGCCA 1 cut(s) 1836
BamHI GGATCC 1 cut(s) 2191
BanI GGYRCC 1 cut(s) 1304
BauI CACGAG 1 cut(s) 63
BbsI GAAGAC 2 cut(s) 743, 944
Bbv12I GWGCWC 1 cut(s) 1918
BbvCI CCTCAGC 2 cut(s) 762, 1698
BbvI GCAGC 3 cut(s) 1792, 2196, 2238
BceAI ACGGC 1 cut(s) 1074
BcgI CGANNNNNNTGC 2 cut(s) 1895, 1929
BciT130I CCWGG 5 cut(s) 376, 414, 1251, 1515, 2150
BciVI GTATCC 2 cut(s) 34, 1591
BclI TGATCA 2 cut(s) 21, 79
BcnI CCSGG 2 cut(s) 1051, 1871
BcoDI GTCTC 4 cut(s) 381, 819, 902, 1401
BfaI CTAG 2 cut(s) 591, 1734
BfmI CTRYAG 2 cut(s) 2210, 2315
BfrI CTTAAG 1 cut(s) 2075
BfuAI ACCTGC 1 cut(s) 1659
BfuI GTATCC 2 cut(s) 34, 1591
BglI GCCNNNNNGGC 1 cut(s) 1874
BglII AGATCT 1 cut(s) 2000
BisI GCNGC 4 cut(s) 1273, 1781, 2210, 2252
BlsI GCNGC 4 cut(s) 1274, 1782, 2211, 2253
Bme1390I CCNGG 7 cut(s) 376, 414, 1051, 1251, 1515, 1871, 2150
Bme18I GGWCC 5 cut(s) 410, 713, 1046, 1205, 2040
BmeT110I CYCGRG 2 cut(s) 384, 1102
BmgBI CACGTC 1 cut(s) 1166
BmgT120I GGNCC 6 cut(s) 410, 713, 1046, 1205, 1315, 2040
BmrFI CCNGG 7 cut(s) 376, 414, 1051, 1251, 1515, 1871, 2150
BmsI GCATC 6 cut(s) 136, 211, 607, 1170, 1338, 2283
BpiI GAAGAC 2 cut(s) 743, 944
BpmI CTGGAG 4 cut(s) 358, 654, 1902, 2171
Bpu10I CCTNAGC 6 cut(s) 351, 517, 762, 1260, 1680, 1698
Bpu14I TTCGAA 1 cut(s) 443
BpuEI CTTGAG 3 cut(s) 268, 1592, 2105
BpuMI CCSGG 2 cut(s) 1051, 1871
BsaBI GATNNNNATC 1 cut(s) 702
BsaHI GRCGYC 1 cut(s) 489
BsaJI CCNNGG 8 cut(s) 375, 406, 413, 633, 1049, 1196, 1250, 1869
Bsc4I CCNNNNNNNGG 6 cut(s) 1043, 1175, 1202, 1341, 1454, 2077
Bse1I ACTGG 6 cut(s) 90, 671, 737, 792, 1009, 1919
Bse3DI GCAATG 2 cut(s) 990, 1214
Bse8I GATNNNNATC 1 cut(s) 702
BseBI CCWGG 5 cut(s) 376, 414, 1251, 1515, 2150
BseDI CCNNGG 8 cut(s) 375, 406, 413, 633, 1049, 1196, 1250, 1869
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 6 cut(s) 1043, 1175, 1202, 1341, 1454, 2077
BseMI GCAATG 2 cut(s) 990, 1214
BseNI ACTGG 6 cut(s) 90, 671, 737, 792, 1009, 1919
BseRI GAGGAG 1 cut(s) 779
BseXI GCAGC 3 cut(s) 1792, 2196, 2238
BseYI CCCAGC 1 cut(s) 1201
BsgI GTGCAG 2 cut(s) 1485, 1914
Bsh1236I CGCG 1 cut(s) 1244
BshFI GGCC 3 cut(s) 1316, 1375, 1836
BshNI GGYRCC 1 cut(s) 1304
BsiHKAI GWGCWC 1 cut(s) 1918
BsiHKCI CYCGRG 2 cut(s) 384, 1102
BsiSI CCGG 2 cut(s) 1051, 1871
BslFI GGGAC 2 cut(s) 1907, 2053
BslI CCNNNNNNNGG 6 cut(s) 1043, 1175, 1202, 1341, 1454, 2077
BsmAI GTCTC 4 cut(s) 381, 819, 902, 1401
BsmFI GGGAC 2 cut(s) 1907, 2053
BsmI GAATGC 1 cut(s) 670
BsnI GGCC 3 cut(s) 1316, 1375, 1836
BsoBI CYCGRG 2 cut(s) 384, 1102
Bsp119I TTCGAA 1 cut(s) 443
Bsp1286I GDGCHC 1 cut(s) 1918
Bsp1407I TGTACA 1 cut(s) 259
Bsp19I CCATGG 1 cut(s) 1196
BspACI CCGC 5 cut(s) 109, 422, 1273, 1345, 1988
BspANI GGCC 3 cut(s) 1316, 1375, 1836
BspFNI CGCG 1 cut(s) 1244
BspMAI CTGCAG 1 cut(s) 2214
BspMI ACCTGC 1 cut(s) 1659
BspPI GGATC 7 cut(s) 96, 432, 838, 1806, 2186, 2199, 2301
BspQI GCTCTTC 1 cut(s) 2199
BspT104I TTCGAA 1 cut(s) 443
BspT107I GGYRCC 1 cut(s) 1304
BspTI CTTAAG 1 cut(s) 2075
BsrDI GCAATG 2 cut(s) 990, 1214
BsrGI TGTACA 1 cut(s) 259
BsrI ACTGG 6 cut(s) 90, 671, 737, 792, 1009, 1919
BssECI CCNNGG 8 cut(s) 375, 406, 413, 633, 1049, 1196, 1250, 1869
BssNI GRCGYC 1 cut(s) 489
BssSI CACGAG 1 cut(s) 63
BssT1I CCWWGG 3 cut(s) 406, 633, 1196
Bst2BI CACGAG 1 cut(s) 63
Bst2UI CCWGG 5 cut(s) 376, 414, 1251, 1515, 2150
Bst4CI ACNGT 7 cut(s) 605, 1521, 1841, 1888, 1903, 1951, 1966
Bst6I CTCTTC 2 cut(s) 1948, 2199
BstACI GRCGYC 1 cut(s) 489
BstAFI CTTAAG 1 cut(s) 2075
BstAPI GCANNNNNTGC 2 cut(s) 617, 1937
BstAUI TGTACA 1 cut(s) 259
BstBI TTCGAA 1 cut(s) 443
BstC8I GCNNGC 3 cut(s) 1826, 2106, 2256
BstDSI CCRYGG 1 cut(s) 1196
BstENI CCTNNNNNAGG 1 cut(s) 2075
BstFNI CGCG 1 cut(s) 1244
BstHHI GCGC 4 cut(s) 1244, 1353, 1453, 2133
BstMAI GTCTC 4 cut(s) 381, 819, 902, 1401
BstMWI GCNNNNNNNGC 9 cut(s) 527, 617, 851, 938, 1261, 1856, 1865, 1874, 1937
BstNI CCWGG 5 cut(s) 376, 414, 1251, 1515, 2150
BstNSI RCATGY 1 cut(s) 1709
BstSCI CCNGG 7 cut(s) 374, 412, 1049, 1249, 1513, 1869, 2148
BstSFI CTRYAG 2 cut(s) 2210, 2315
BstUI CGCG 1 cut(s) 1244
BstV1I GCAGC 3 cut(s) 1792, 2196, 2238
BstV2I GAAGAC 2 cut(s) 743, 944
BstX2I RGATCY 7 cut(s) 88, 424, 830, 1798, 2000, 2191, 2293
BstXI CCANNNNNNTGG 1 cut(s) 640
BstYI RGATCY 7 cut(s) 88, 424, 830, 1798, 2000, 2191, 2293
BsuI GTATCC 2 cut(s) 34, 1591
BsuRI GGCC 3 cut(s) 1316, 1375, 1836
BtgI CCRYGG 1 cut(s) 1196
BtrI CACGTC 1 cut(s) 1166
BtsI GCAGTG 1 cut(s) 1720
BtsIMutI CAGTG 9 cut(s) 44, 579, 799, 1002, 1720, 1752, 1899, 1962, 2233
BveI ACCTGC 1 cut(s) 1659
Cac8I GCNNGC 3 cut(s) 1826, 2106, 2256
CfoI GCGC 4 cut(s) 1244, 1353, 1453, 2133
Cfr13I GGNCC 6 cut(s) 410, 713, 1046, 1205, 1315, 2040
CseI GACGC 1 cut(s) 478
Csp6I GTAC 5 cut(s) 260, 1126, 1305, 1522, 2143
CspCI CAANNNNNGTGG 4 cut(s) 286, 321, 1376, 1411
CviQI GTAC 5 cut(s) 260, 1126, 1305, 1522, 2143
DraI TTTAAA 1 cut(s) 964
EaeI YGGCCR 1 cut(s) 1834
Eam1104I CTCTTC 2 cut(s) 1948, 2199
EarI CTCTTC 2 cut(s) 1948, 2199
EciI GGCGGA 1 cut(s) 1360
Eco130I CCWWGG 3 cut(s) 406, 633, 1196
Eco32I GATATC 2 cut(s) 329, 343
Eco47I GGWCC 5 cut(s) 410, 713, 1046, 1205, 2040
Eco57I CTGAAG 5 cut(s) 452, 999, 1194, 2055, 2209
Eco88I CYCGRG 2 cut(s) 384, 1102
EcoNI CCTNNNNNAGG 1 cut(s) 2075
EcoO109I RGGNCCY 1 cut(s) 1205
EcoRII CCWGG 5 cut(s) 374, 412, 1249, 1513, 2148
EcoRV GATATC 2 cut(s) 329, 343
EcoT14I CCWWGG 3 cut(s) 406, 633, 1196
EcoT22I ATGCAT 1 cut(s) 1185
ErhI CCWWGG 3 cut(s) 406, 633, 1196
FaqI GGGAC 2 cut(s) 1907, 2053
FauI CCCGC 1 cut(s) 1995
FbaI TGATCA 2 cut(s) 21, 79
FblI GTMKAC 3 cut(s) 11, 575, 1905
Fnu4HI GCNGC 4 cut(s) 1273, 1781, 2210, 2252
Fsp4HI GCNGC 4 cut(s) 1273, 1781, 2210, 2252
FspBI CTAG 2 cut(s) 591, 1734
FspI TGCGCA 3 cut(s) 1352, 1452, 2132
GlaI GCGC 4 cut(s) 1243, 1352, 1452, 2132
GluI GCNGC 4 cut(s) 1273, 1781, 2210, 2252
GsaI CCCAGC 1 cut(s) 1205
GsuI CTGGAG 4 cut(s) 358, 654, 1902, 2171
HaeIII GGCC 3 cut(s) 1316, 1375, 1836
HapII CCGG 2 cut(s) 1051, 1871
HgaI GACGC 1 cut(s) 478
HhaI GCGC 4 cut(s) 1244, 1353, 1453, 2133
Hin1I GRCGYC 1 cut(s) 489
Hin6I GCGC 4 cut(s) 1242, 1351, 1451, 2131
HinP1I GCGC 4 cut(s) 1242, 1351, 1451, 2131
HincII GTYRAC 5 cut(s) 172, 433, 1291, 1672, 1906
HindII GTYRAC 5 cut(s) 172, 433, 1291, 1672, 1906
HindIII AAGCTT 1 cut(s) 1262
HpaI GTTAAC 1 cut(s) 1672
HpaII CCGG 2 cut(s) 1051, 1871
HphI GGTGA 3 cut(s) 31, 194, 1503
Hpy166II GTNNAC 9 cut(s) 12, 104, 172, 365, 433, 576, 1291, 1672, 1906
Hpy188III TCNNGA 8 cut(s) 92, 247, 386, 493, 711, 1102, 1679, 2201
Hpy8I GTNNAC 9 cut(s) 12, 104, 172, 365, 433, 576, 1291, 1672, 1906
Hpy99I CGWCG 1 cut(s) 951
HpyAV CCTTC 7 cut(s) 535, 766, 778, 1218, 1740, 1744, 2030
HpyCH4III ACNGT 7 cut(s) 605, 1521, 1841, 1888, 1903, 1951, 1966
HpyCH4IV ACGT 4 cut(s) 1165, 1293, 1573, 1665
HpyCH4V TGCA 7 cut(s) 854, 941, 1183, 1502, 1883, 1931, 2212
HpyF10VI GCNNNNNNNGC 9 cut(s) 527, 617, 851, 938, 1261, 1856, 1865, 1874, 1937
HpySE526I ACGT 4 cut(s) 1165, 1293, 1573, 1665
Hsp92I GRCGYC 1 cut(s) 489
HspAI GCGC 4 cut(s) 1242, 1351, 1451, 2131
KpnI GGTACC 1 cut(s) 1308
Ksp22I TGATCA 2 cut(s) 21, 79
KspAI GTTAAC 1 cut(s) 1672
LguI GCTCTTC 1 cut(s) 2199
LmnI GCTCC 7 cut(s) 526, 673, 743, 937, 1921, 2080, 2152
Lsp1109I GCAGC 3 cut(s) 1792, 2196, 2238
LweI GCATC 6 cut(s) 136, 211, 607, 1170, 1338, 2283
MaeI CTAG 2 cut(s) 591, 1734
MaeII ACGT 4 cut(s) 1165, 1293, 1573, 1665
MaeIII GTNAC 7 cut(s) 190, 628, 730, 1509, 1715, 1951, 2014
MboII GAAGA 9 cut(s) 188, 457, 680, 743, 944, 1935, 1995, 2216, 2272
MflI RGATCY 7 cut(s) 88, 424, 830, 1798, 2000, 2191, 2293
MhlI GDGCHC 1 cut(s) 1918
MlsI TGGCCA 1 cut(s) 1836
MluCI AATT 7 cut(s) 133, 1041, 1134, 1234, 1761, 2110, 2124
MluNI TGGCCA 1 cut(s) 1836
MlyI GAGTC 6 cut(s) 187, 388, 785, 904, 920, 1517
MmeI TCCRAC 1 cut(s) 721
Mox20I TGGCCA 1 cut(s) 1836
Mph1103I ATGCAT 1 cut(s) 1185
MscI TGGCCA 1 cut(s) 1836
MseI TTAA 8 cut(s) 569, 864, 963, 1113, 1310, 1671, 2076, 2100
MslI CAYNNNNRTG 2 cut(s) 158, 1005
Msp20I TGGCCA 1 cut(s) 1836
MspCI CTTAAG 1 cut(s) 2075
MspI CCGG 2 cut(s) 1051, 1871
MspR9I CCNGG 7 cut(s) 376, 414, 1051, 1251, 1515, 1871, 2150
Mva1269I GAATGC 1 cut(s) 670
MvaI CCWGG 5 cut(s) 376, 414, 1251, 1515, 2150
MvnI CGCG 1 cut(s) 1244
MwoI GCNNNNNNNGC 9 cut(s) 527, 617, 851, 938, 1261, 1856, 1865, 1874, 1937
NciI CCSGG 2 cut(s) 1051, 1871
NcoI CCATGG 1 cut(s) 1196
NmeAIII GCCGAG 1 cut(s) 908
NmuCI GTSAC 6 cut(s) 190, 628, 1509, 1715, 1951, 2014
NsbI TGCGCA 3 cut(s) 1352, 1452, 2132
NsiI ATGCAT 1 cut(s) 1185
NspI RCATGY 1 cut(s) 1709
NspV TTCGAA 1 cut(s) 443
OliI CACNNNNGTG 1 cut(s) 1005
PaeR7I CTCGAG 2 cut(s) 384, 1102
PciI ACATGT 1 cut(s) 1705
PciSI GCTCTTC 1 cut(s) 2199
PcsI WCGNNNNNNNCGW 1 cut(s) 1162
PctI GAATGC 1 cut(s) 670
PfeI GAWTC 9 cut(s) 500, 587, 652, 698, 970, 1427, 1444, 1588, 1613
PflFI GACNNNGTC 1 cut(s) 1721
PflMI CCANNNNNTGG 2 cut(s) 1043, 1341
PkrI GCNGC 4 cut(s) 1274, 1782, 2211, 2253
PleI GAGTC 6 cut(s) 187, 388, 784, 904, 920, 1516
PpsI GAGTC 6 cut(s) 187, 388, 784, 904, 920, 1516
PpuMI RGGWCCY 1 cut(s) 1205
PscI ACATGT 1 cut(s) 1705
Psp5II RGGWCCY 1 cut(s) 1205
Psp6I CCWGG 5 cut(s) 374, 412, 1249, 1513, 2148
PspFI CCCAGC 1 cut(s) 1201
PspGI CCWGG 5 cut(s) 374, 412, 1249, 1513, 2148
PspPI GGNCC 6 cut(s) 410, 713, 1046, 1205, 1315, 2040
PspPPI RGGWCCY 1 cut(s) 1205
PstI CTGCAG 1 cut(s) 2214
PsuI RGATCY 7 cut(s) 88, 424, 830, 1798, 2000, 2191, 2293
PsyI GACNNNGTC 1 cut(s) 1721
RsaI GTAC 5 cut(s) 261, 1127, 1306, 1523, 2144
RsaNI GTAC 5 cut(s) 260, 1126, 1305, 1522, 2143
RseI CAYNNNNRTG 2 cut(s) 158, 1005
SalI GTCGAC 1 cut(s) 1904
SapI GCTCTTC 1 cut(s) 2199
SaqAI TTAA 8 cut(s) 569, 864, 963, 1113, 1310, 1671, 2076, 2100
SatI GCNGC 4 cut(s) 1273, 1781, 2210, 2252
Sau96I GGNCC 6 cut(s) 410, 713, 1046, 1205, 1315, 2040
SchI GAGTC 6 cut(s) 187, 388, 785, 904, 920, 1517
ScrFI CCNGG 7 cut(s) 376, 414, 1051, 1251, 1515, 1871, 2150
SduI GDGCHC 1 cut(s) 1918
SfaNI GCATC 6 cut(s) 136, 211, 607, 1170, 1338, 2283
SfcI CTRYAG 2 cut(s) 2210, 2315
Sfr274I CTCGAG 2 cut(s) 384, 1102
SfuI TTCGAA 1 cut(s) 443
SinI GGWCC 5 cut(s) 410, 713, 1046, 1205, 2040
SlaI CTCGAG 2 cut(s) 384, 1102
SmiMI CAYNNNNRTG 2 cut(s) 158, 1005
SmlI CTYRAG 6 cut(s) 247, 384, 1102, 1607, 2075, 2084
SmoI CTYRAG 6 cut(s) 247, 384, 1102, 1607, 2075, 2084
Sse9I AATT 7 cut(s) 133, 1041, 1134, 1234, 1761, 2110, 2124
SsiI CCGC 5 cut(s) 109, 422, 1273, 1345, 1988
SspMI CTAG 2 cut(s) 591, 1734
StyD4I CCNGG 7 cut(s) 374, 412, 1049, 1249, 1513, 1869, 2148
StyI CCWWGG 3 cut(s) 406, 633, 1196
TaaI ACNGT 7 cut(s) 605, 1521, 1841, 1888, 1903, 1951, 1966
TaiI ACGT 4 cut(s) 1168, 1296, 1576, 1668
TaqI TCGA 5 cut(s) 385, 443, 650, 1103, 1905
TasI AATT 7 cut(s) 133, 1041, 1134, 1234, 1761, 2110, 2124
TatI WGTACW 3 cut(s) 259, 1125, 2142
TauI GCSGC 1 cut(s) 1275
TfiI GAWTC 9 cut(s) 500, 587, 652, 698, 970, 1427, 1444, 1588, 1613
Tru1I TTAA 8 cut(s) 569, 864, 963, 1113, 1310, 1671, 2076, 2100
Tru9I TTAA 8 cut(s) 569, 864, 963, 1113, 1310, 1671, 2076, 2100
TscAI CASTG 9 cut(s) 51, 586, 799, 1009, 1720, 1752, 1906, 1969, 2233
TseFI GTSAC 6 cut(s) 190, 628, 1509, 1715, 1951, 2014
TseI GCWGC 3 cut(s) 1780, 2209, 2251
Tsp45I GTSAC 6 cut(s) 190, 628, 1509, 1715, 1951, 2014
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 9 cut(s) 51, 586, 799, 1009, 1720, 1752, 1906, 1969, 2233
Tth111I GACNNNGTC 1 cut(s) 1721
Van91I CCANNNNNTGG 2 cut(s) 1043, 1341
Vha464I CTTAAG 1 cut(s) 2075
VpaK11BI GGWCC 5 cut(s) 410, 713, 1046, 1205, 2040
XagI CCTNNNNNAGG 1 cut(s) 2075
XapI RAATTY 2 cut(s) 2110, 2124
XceI RCATGY 1 cut(s) 1709
XhoI CTCGAG 2 cut(s) 384, 1102
XmiI GTMKAC 3 cut(s) 11, 575, 1905
XspI CTAG 2 cut(s) 591, 1734
Zsp2I ATGCAT 1 cut(s) 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.