Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0007181

Physical Location & Seq

Genomic Coordinates Reverse (-)

10955256 .. 10959857

Gene Structure 4602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG130300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGTTACTGATTGTGTTGAAGGTCAAATATGGGGATACACTGAGGCGTTTCAATGCTCGTGTTGATGAGAATGATCAACTGGATCTTGACATGGGTGGACTGCGGTTCAAAATATATAGTCTTTTCAATTTTCAGCTTGATGCTGACATCACTATGACCTATGTTGACGAAGATGGTGATATAGTGACTCTGGTTGATGATGAGGATTTGCGTGATGCTATGAAGCAGAATATGAAGTTCTTGAGGATTGATGTACATGATAAAACTGACAAATCTGAGAAATCTTATGCCAAATCAAGTGGAAGTTCTACCCCTGTAAGATATCCCTTGCCAGATATCACGCCTGAGCCTATCCGTGAACTAATCTCCAGGGTTCCTCGTGACTTGACTCCAAATGCCCTTGGTCCAGGGTTTGCGGATCTCGTTGACTGCTTTTCGAAGATGGGAATGTCCTATTTACTTCAGGCTGGTGGAGTTTCAGGCGTCAAGAATGATTCCTCTGAGAAACCCTTAGCTCCATCTGCCAATGATATGAAGGACGATGGTAAGTCAGAAACCATCTTAAAGTCTACCACTGAGGAATCTAGCTCTAAAAACAGTCGGGCAAAGGATGCTGTAATTGTGACCAAGGATGTGAGAATGTCGAATCCACCTCAGAATGCTCCAGTTGATCTCAATGTTCTTCCTGCTGATTCTAATCCATCTGGACCCACACCCATCAATGTTACACCAGTTGGAGCAAGTCTTCATACTGCTGAGGAGAGGAAGGAGTCAGAGAAGGGTACCAGTGGTCAGGTCAAGGGCAAGTCTCTTGGTTGTGGTGGATCTACAAGTTCTGCTATCCCTGCATTGAATGTTAATGACATGAGCAATAATCATTTCAATCAATGTCCATTTTCAGAGACTCCTATTGTGAATGACTCGGCTCCTGTTGCATATCGTCGTCTTCATCCTTTTAAAAGGAATCATTCTGAAGCAATGGGTGGTATGTTCCACACTGGTGTTCGCTGTGATGGATGTGGTTGTCATCCAATAATTGGACCCCGGTTCAAGTCCATAGTGAAAGCAGATTATGACCTCTGCCGTATCTGTTTCTCGAGTATTGTTAATGTGGCTGAGTACATTAGAATTGACCACCCTTTGTCTTATCGCCATCCACGTCCTTTCAAGGGGATGCATGAACAACCTCCATGGCTGGGTCCTTCAGCATTGCCAAAGATACTGAGAAATTGTGGCGCGAAGCCTGGGCGACCTAAGCTTGACAGCCGCTTTGTTTTGGATGTCAATGTAATGGATGGTACCTTAATGGCCCCATCTACTCCATTTACCAAGATTTGGCGGATGCGCAACAATGGGGGTTTGATCTGGCCTAAAGGAACACAACTCATGTGGATTGGTGGAGACAGGTTTAGCAAATCAGATTCAGTTGAGATAGAGATTCCTGCGCATGGTGTATTGGCTGAAAATGAACTTGATATTGCTGTTGATTTTACTGCACCTGAGTCACCTGGACGGTACATCTCATATTGGAGGATGGCTTCTCCATCTGGTCAGAAGTTTGGGCAACGTGTTTGGGTTCTGATTCAGGTGGATACTTCCCTCAAGGATTCATTCTTTGAGAGCTTTCAAGGTTTGAACCTGAACCTGCCCCCTGAAAACGTGGTTAACTTTCCTGAGCAAATGAACTTTCCTCAGCAACATGTGGGCAGTGACTTTGTCCAGCCTTCTAGCTCTAACTCAGTGAAGGAACCAGCAATTCCCATTCCTGTCAAGCAGCCTGAAAATGAGCAGGATCTCAACTTCCCTATAAATGATAGCTTGCTGGTTGGCCACAGTATTCCTGCCCCTACTGCCCCTACTGCCCCGGTGGCTTCTGCAACTGTGTCATACCCCACTGTCGACCAGAGTGCTCCAGTCCCTACTGCACAAGTTGCCTCTTCAACTGTGACATACCCCACTGTTGATATATTTGAACCAGCCCCGCCCTCCCCCAGATCTTCCCCTGTTGTCACTCTACCAACATCATCTGAAGGGACCAGCTCAGAAAATCCTGTGGAGGACACCCTCCTTAAGGAGCTTGAGGACATGGGATTTAAGCAGGCGAATTTGAACAAGGAAATTCTGCGCAGGAATGAGTACAACCTGGAGCAATCTGTGGATGATCTCTGTGAGGTTGCTGAATGGGATCCTATTCTTGAAGAGCTGCAGGAAATGGGCTTCAGTGATACAGAGATGAACAAGAAGCTGCTTGCGAAGAACAATGGAAGCATCAAGCGTGTAGTCATGGATCTTATCAATGGGGACAAGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005773 GO:0005829 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012505 GO:0016043 GO:0016236 GO:0022607 GO:0031410 GO:0031982 GO:0032182 GO:0034622 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0051258 GO:0051259 GO:0061919 GO:0065003 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

N_BRCA1_IG PB1 ZZ

Protein Analysis

770

Amino Acids

84.66

Weight (kDa)

5.18

Isoelectric Point (pI)

45.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1	PF00564	5 - 87	5.3e-09	PB1 domain
ZZ	PF00569	332 - 367	7.7e-09	Zinc finger, ZZ type
N_BRCA1_IG	PF16158	429 - 530	8.5e-33	Ig-like domain from next to BRCA1 gene
UBA_NBR1_C	PF24932	686 - 725	8.2e-23	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain
UBA_NBR1_C	PF24932	728 - 765	4.1e-11	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24690
fragaria_vesca	FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270
malus_domestica	MD06G1165900.v1.1 MD14G1171800.v1.1
prunus_persica	Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1
pyrus_communis	pycom06g14840 pycom14g14340
rosa_chinensis	RchiOBHm_Chr7g0192591
rosa_laevigata	RLG00000004349
rosa_multiflora	Rmu_sc0003108.1_g000043
rosa_roxburghii	Rroxscaffold_3G00262920
rosa_rugosa	Rorug07G0002500
rosa_samantha	Rh7AG126900 Rh7BG129200 Rh7CG131000 Rh7DG130300
rosa_wichuraiana	Rw7G010910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	3 cut(s)	1346, 1446, 2126
Acc36I	ACCTGC	1 cut(s)	1653
Acc65I	GGTACC	2 cut(s)	782, 1298
AccB1I	GGYRCC	2 cut(s)	782, 1298
AccB7I	CCANNNNNTGG	2 cut(s)	1037, 1335
AccI	GTMKAC	2 cut(s)	569, 1899
AccII	CGCG	1 cut(s)	1238
AciI	CCGC	5 cut(s)	103, 416, 1267, 1339, 1982
AclWI	GGATC	7 cut(s)	90, 426, 832, 1800, 2180, 2193, 2295
AcoI	YGGCCR	1 cut(s)	1828
AcsI	RAATTY	2 cut(s)	2104, 2118
AcuI	CTGAAG	5 cut(s)	446, 993, 1188, 2049, 2203
AcyI	GRCGYC	1 cut(s)	483
AfaI	GTAC	6 cut(s)	255, 784, 1121, 1300, 1517, 2138
AfiI	CCNNNNNNNGG	6 cut(s)	1037, 1169, 1196, 1335, 1448, 2071
AflII	CTTAAG	1 cut(s)	2069
AflIII	ACRYGT	2 cut(s)	1567, 1699
AjiI	CACGTC	1 cut(s)	1160
AjnI	CCWGG	5 cut(s)	368, 406, 1243, 1507, 2142
AleI	CACNNNNGTG	1 cut(s)	999
Alw21I	GWGCWC	1 cut(s)	1912
Alw26I	GTCTC	3 cut(s)	813, 896, 1395
AlwI	GGATC	7 cut(s)	90, 426, 832, 1800, 2180, 2193, 2295
Ama87I	CYCGRG	1 cut(s)	1096
AoxI	GGCC	3 cut(s)	1308, 1367, 1828
ApeKI	GCWGC	3 cut(s)	1774, 2203, 2245
ApoI	RAATTY	2 cut(s)	2104, 2118
ArsI	GACNNNNNNTTYG	2 cut(s)	1253, 1285
Asp718I	GGTACC	2 cut(s)	782, 1298
AspLEI	GCGC	4 cut(s)	1238, 1347, 1447, 2127
AspS9I	GGNCC	6 cut(s)	404, 707, 1040, 1199, 1309, 2034
AsuC2I	CCSGG	2 cut(s)	1045, 1865
AsuHPI	GGTGA	2 cut(s)	188, 1497
AsuII	TTCGAA	1 cut(s)	437
AvaI	CYCGRG	1 cut(s)	1096
AvaII	GGWCC	5 cut(s)	404, 707, 1040, 1199, 2034
BalI	TGGCCA	1 cut(s)	1830
BamHI	GGATCC	1 cut(s)	2185
BanI	GGYRCC	2 cut(s)	782, 1298
BauI	CACGAG	2 cut(s)	57, 378
BbsI	GAAGAC	2 cut(s)	737, 938
Bbv12I	GWGCWC	1 cut(s)	1912
BbvCI	CCTCAGC	2 cut(s)	756, 1692
BbvI	GCAGC	3 cut(s)	1786, 2190, 2232
BceAI	ACGGC	1 cut(s)	1068
BcgI	CGANNNNNNTGC	2 cut(s)	1889, 1923
BciT130I	CCWGG	5 cut(s)	370, 408, 1245, 1509, 2144
BciVI	GTATCC	2 cut(s)	28, 1585
BclI	TGATCA	1 cut(s)	73
BcnI	CCSGG	2 cut(s)	1045, 1865
BcoDI	GTCTC	3 cut(s)	813, 896, 1395
BfaI	CTAG	2 cut(s)	585, 1728
BfmI	CTRYAG	2 cut(s)	2204, 2309
BfrI	CTTAAG	1 cut(s)	2069
BfuAI	ACCTGC	1 cut(s)	1653
BfuI	GTATCC	2 cut(s)	28, 1585
BglI	GCCNNNNNGGC	1 cut(s)	1868
BglII	AGATCT	1 cut(s)	1994
BisI	GCNGC	4 cut(s)	1267, 1775, 2204, 2246
BlsI	GCNGC	4 cut(s)	1268, 1776, 2205, 2247
Bme1390I	CCNGG	7 cut(s)	370, 408, 1045, 1245, 1509, 1865, 2144
Bme18I	GGWCC	5 cut(s)	404, 707, 1040, 1199, 2034
BmeT110I	CYCGRG	1 cut(s)	1096
BmgBI	CACGTC	1 cut(s)	1160
BmgT120I	GGNCC	6 cut(s)	404, 707, 1040, 1199, 1309, 2034
BmrFI	CCNGG	7 cut(s)	370, 408, 1045, 1245, 1509, 1865, 2144
BmsI	GCATC	6 cut(s)	130, 205, 601, 1164, 1332, 2277
BpiI	GAAGAC	2 cut(s)	737, 938
BpmI	CTGGAG	4 cut(s)	352, 648, 1896, 2165
Bpu10I	CCTNAGC	6 cut(s)	345, 511, 756, 1254, 1674, 1692
Bpu14I	TTCGAA	1 cut(s)	437
BpuEI	CTTGAG	3 cut(s)	262, 1586, 2099
BpuMI	CCSGG	2 cut(s)	1045, 1865
BsaBI	GATNNNNATC	1 cut(s)	696
BsaHI	GRCGYC	1 cut(s)	483
BsaJI	CCNNGG	8 cut(s)	369, 400, 407, 627, 1043, 1190, 1244, 1863
Bsc4I	CCNNNNNNNGG	6 cut(s)	1037, 1169, 1196, 1335, 1448, 2071
Bse1I	ACTGG	6 cut(s)	84, 665, 731, 786, 1003, 1913
Bse3DI	GCAATG	2 cut(s)	984, 1208
Bse8I	GATNNNNATC	1 cut(s)	696
BseBI	CCWGG	5 cut(s)	370, 408, 1245, 1509, 2144
BseDI	CCNNGG	8 cut(s)	369, 400, 407, 627, 1043, 1190, 1244, 1863
BseJI	GATNNNNATC	1 cut(s)	696
BseLI	CCNNNNNNNGG	6 cut(s)	1037, 1169, 1196, 1335, 1448, 2071
BseMI	GCAATG	2 cut(s)	984, 1208
BseNI	ACTGG	6 cut(s)	84, 665, 731, 786, 1003, 1913
BseRI	GAGGAG	1 cut(s)	773
BseXI	GCAGC	3 cut(s)	1786, 2190, 2232
BseYI	CCCAGC	1 cut(s)	1195
BsgI	GTGCAG	2 cut(s)	1479, 1908
Bsh1236I	CGCG	1 cut(s)	1238
BshFI	GGCC	3 cut(s)	1310, 1369, 1830
BshNI	GGYRCC	2 cut(s)	782, 1298
BsiHKAI	GWGCWC	1 cut(s)	1912
BsiHKCI	CYCGRG	1 cut(s)	1096
BsiSI	CCGG	2 cut(s)	1045, 1865
BslFI	GGGAC	2 cut(s)	1901, 2047
BslI	CCNNNNNNNGG	6 cut(s)	1037, 1169, 1196, 1335, 1448, 2071
BsmAI	GTCTC	3 cut(s)	813, 896, 1395
BsmFI	GGGAC	2 cut(s)	1901, 2047
BsmI	GAATGC	1 cut(s)	664
BsnI	GGCC	3 cut(s)	1310, 1369, 1830
BsoBI	CYCGRG	1 cut(s)	1096
Bsp119I	TTCGAA	1 cut(s)	437
Bsp1286I	GDGCHC	1 cut(s)	1912
Bsp1407I	TGTACA	1 cut(s)	253
Bsp19I	CCATGG	1 cut(s)	1190
BspACI	CCGC	5 cut(s)	103, 416, 1267, 1339, 1982
BspANI	GGCC	3 cut(s)	1310, 1369, 1830
BspFNI	CGCG	1 cut(s)	1238
BspMAI	CTGCAG	1 cut(s)	2208
BspMI	ACCTGC	1 cut(s)	1653
BspPI	GGATC	7 cut(s)	90, 426, 832, 1800, 2180, 2193, 2295
BspQI	GCTCTTC	1 cut(s)	2193
BspT104I	TTCGAA	1 cut(s)	437
BspT107I	GGYRCC	2 cut(s)	782, 1298
BspTI	CTTAAG	1 cut(s)	2069
BsrDI	GCAATG	2 cut(s)	984, 1208
BsrGI	TGTACA	1 cut(s)	253
BsrI	ACTGG	6 cut(s)	84, 665, 731, 786, 1003, 1913
BssECI	CCNNGG	8 cut(s)	369, 400, 407, 627, 1043, 1190, 1244, 1863
BssNI	GRCGYC	1 cut(s)	483
BssSI	CACGAG	2 cut(s)	57, 378
BssT1I	CCWWGG	3 cut(s)	400, 627, 1190
Bst2BI	CACGAG	2 cut(s)	57, 378
Bst2UI	CCWGG	5 cut(s)	370, 408, 1245, 1509, 2144
Bst4CI	ACNGT	7 cut(s)	599, 1515, 1835, 1882, 1897, 1945, 1960
Bst6I	CTCTTC	2 cut(s)	1942, 2193
BstACI	GRCGYC	1 cut(s)	483
BstAFI	CTTAAG	1 cut(s)	2069
BstAPI	GCANNNNNTGC	2 cut(s)	611, 1931
BstAUI	TGTACA	1 cut(s)	253
BstBI	TTCGAA	1 cut(s)	437
BstC8I	GCNNGC	3 cut(s)	1820, 2100, 2250
BstDSI	CCRYGG	1 cut(s)	1190
BstENI	CCTNNNNNAGG	1 cut(s)	2069
BstFNI	CGCG	1 cut(s)	1238
BstHHI	GCGC	4 cut(s)	1238, 1347, 1447, 2127
BstMAI	GTCTC	3 cut(s)	813, 896, 1395
BstMWI	GCNNNNNNNGC	9 cut(s)	521, 611, 845, 932, 1255, 1850, 1859, 1868, 1931
BstNI	CCWGG	5 cut(s)	370, 408, 1245, 1509, 2144
BstNSI	RCATGY	1 cut(s)	1703
BstSCI	CCNGG	7 cut(s)	368, 406, 1043, 1243, 1507, 1863, 2142
BstSFI	CTRYAG	2 cut(s)	2204, 2309
BstUI	CGCG	1 cut(s)	1238
BstV1I	GCAGC	3 cut(s)	1786, 2190, 2232
BstV2I	GAAGAC	2 cut(s)	737, 938
BstX2I	RGATCY	7 cut(s)	82, 418, 824, 1792, 1994, 2185, 2287
BstYI	RGATCY	7 cut(s)	82, 418, 824, 1792, 1994, 2185, 2287
BsuI	GTATCC	2 cut(s)	28, 1585
BsuRI	GGCC	3 cut(s)	1310, 1369, 1830
BtgI	CCRYGG	1 cut(s)	1190
BtrI	CACGTC	1 cut(s)	1160
BtsI	GCAGTG	1 cut(s)	1714
BtsIMutI	CAGTG	9 cut(s)	38, 573, 793, 996, 1714, 1746, 1893, 1956, 2227
BveI	ACCTGC	1 cut(s)	1653
Cac8I	GCNNGC	3 cut(s)	1820, 2100, 2250
CfoI	GCGC	4 cut(s)	1238, 1347, 1447, 2127
Cfr13I	GGNCC	6 cut(s)	404, 707, 1040, 1199, 1309, 2034
CseI	GACGC	1 cut(s)	472
Csp6I	GTAC	6 cut(s)	254, 783, 1120, 1299, 1516, 2137
CspCI	CAANNNNNGTGG	4 cut(s)	280, 315, 1370, 1405
CviQI	GTAC	6 cut(s)	254, 783, 1120, 1299, 1516, 2137
DraI	TTTAAA	1 cut(s)	958
EaeI	YGGCCR	1 cut(s)	1828
Eam1104I	CTCTTC	2 cut(s)	1942, 2193
EarI	CTCTTC	2 cut(s)	1942, 2193
EciI	GGCGGA	1 cut(s)	1354
Eco130I	CCWWGG	3 cut(s)	400, 627, 1190
Eco32I	GATATC	2 cut(s)	323, 337
Eco47I	GGWCC	5 cut(s)	404, 707, 1040, 1199, 2034
Eco57I	CTGAAG	5 cut(s)	446, 993, 1188, 2049, 2203
Eco88I	CYCGRG	1 cut(s)	1096
EcoNI	CCTNNNNNAGG	1 cut(s)	2069
EcoO109I	RGGNCCY	1 cut(s)	1199
EcoRII	CCWGG	5 cut(s)	368, 406, 1243, 1507, 2142
EcoRV	GATATC	2 cut(s)	323, 337
EcoT14I	CCWWGG	3 cut(s)	400, 627, 1190
EcoT22I	ATGCAT	1 cut(s)	1179
ErhI	CCWWGG	3 cut(s)	400, 627, 1190
FaqI	GGGAC	2 cut(s)	1901, 2047
FauI	CCCGC	1 cut(s)	1989
FbaI	TGATCA	1 cut(s)	73
FblI	GTMKAC	2 cut(s)	569, 1899
Fnu4HI	GCNGC	4 cut(s)	1267, 1775, 2204, 2246
Fsp4HI	GCNGC	4 cut(s)	1267, 1775, 2204, 2246
FspBI	CTAG	2 cut(s)	585, 1728
FspI	TGCGCA	3 cut(s)	1346, 1446, 2126
GlaI	GCGC	4 cut(s)	1237, 1346, 1446, 2126
GluI	GCNGC	4 cut(s)	1267, 1775, 2204, 2246
GsaI	CCCAGC	1 cut(s)	1199
GsuI	CTGGAG	4 cut(s)	352, 648, 1896, 2165
HaeIII	GGCC	3 cut(s)	1310, 1369, 1830
HapII	CCGG	2 cut(s)	1045, 1865
HgaI	GACGC	1 cut(s)	472
HhaI	GCGC	4 cut(s)	1238, 1347, 1447, 2127
Hin1I	GRCGYC	1 cut(s)	483
Hin6I	GCGC	4 cut(s)	1236, 1345, 1445, 2125
HinP1I	GCGC	4 cut(s)	1236, 1345, 1445, 2125
HincII	GTYRAC	4 cut(s)	166, 427, 1666, 1900
HindII	GTYRAC	4 cut(s)	166, 427, 1666, 1900
HindIII	AAGCTT	1 cut(s)	1256
HpaI	GTTAAC	1 cut(s)	1666
HpaII	CCGG	2 cut(s)	1045, 1865
HphI	GGTGA	2 cut(s)	188, 1497
Hpy166II	GTNNAC	7 cut(s)	98, 166, 359, 427, 570, 1666, 1900
Hpy188III	TCNNGA	8 cut(s)	86, 241, 380, 487, 705, 1096, 1673, 2195
Hpy8I	GTNNAC	7 cut(s)	98, 166, 359, 427, 570, 1666, 1900
Hpy99I	CGWCG	1 cut(s)	945
HpyAV	CCTTC	8 cut(s)	13, 529, 760, 772, 1212, 1734, 1738, 2024
HpyCH4III	ACNGT	7 cut(s)	599, 1515, 1835, 1882, 1897, 1945, 1960
HpyCH4IV	ACGT	3 cut(s)	1159, 1567, 1659
HpyCH4V	TGCA	7 cut(s)	848, 935, 1177, 1496, 1877, 1925, 2206
HpyF10VI	GCNNNNNNNGC	9 cut(s)	521, 611, 845, 932, 1255, 1850, 1859, 1868, 1931
HpySE526I	ACGT	3 cut(s)	1159, 1567, 1659
Hsp92I	GRCGYC	1 cut(s)	483
HspAI	GCGC	4 cut(s)	1236, 1345, 1445, 2125
KpnI	GGTACC	2 cut(s)	786, 1302
Ksp22I	TGATCA	1 cut(s)	73
KspAI	GTTAAC	1 cut(s)	1666
LguI	GCTCTTC	1 cut(s)	2193
LmnI	GCTCC	7 cut(s)	520, 667, 737, 931, 1915, 2074, 2146
Lsp1109I	GCAGC	3 cut(s)	1786, 2190, 2232
LweI	GCATC	6 cut(s)	130, 205, 601, 1164, 1332, 2277
MaeI	CTAG	2 cut(s)	585, 1728
MaeII	ACGT	3 cut(s)	1159, 1567, 1659
MaeIII	GTNAC	9 cut(s)	3, 184, 380, 622, 724, 1503, 1709, 1945, 2008
MboII	GAAGA	9 cut(s)	182, 451, 674, 737, 938, 1929, 1989, 2210, 2266
MflI	RGATCY	7 cut(s)	82, 418, 824, 1792, 1994, 2185, 2287
MhlI	GDGCHC	1 cut(s)	1912
MlsI	TGGCCA	1 cut(s)	1830
MluCI	AATT	8 cut(s)	127, 618, 1035, 1128, 1228, 1755, 2104, 2118
MluNI	TGGCCA	1 cut(s)	1830
MlyI	GAGTC	6 cut(s)	181, 382, 779, 898, 914, 1511
MmeI	TCCRAC	1 cut(s)	715
Mox20I	TGGCCA	1 cut(s)	1830
Mph1103I	ATGCAT	1 cut(s)	1179
MscI	TGGCCA	1 cut(s)	1830
MseI	TTAA	8 cut(s)	563, 858, 957, 1107, 1304, 1665, 2070, 2094
MslI	CAYNNNNRTG	2 cut(s)	152, 999
Msp20I	TGGCCA	1 cut(s)	1830
MspCI	CTTAAG	1 cut(s)	2069
MspI	CCGG	2 cut(s)	1045, 1865
MspR9I	CCNGG	7 cut(s)	370, 408, 1045, 1245, 1509, 1865, 2144
Mva1269I	GAATGC	1 cut(s)	664
MvaI	CCWGG	5 cut(s)	370, 408, 1245, 1509, 2144
MvnI	CGCG	1 cut(s)	1238
MwoI	GCNNNNNNNGC	9 cut(s)	521, 611, 845, 932, 1255, 1850, 1859, 1868, 1931
NciI	CCSGG	2 cut(s)	1045, 1865
NcoI	CCATGG	1 cut(s)	1190
NmeAIII	GCCGAG	1 cut(s)	902
NmuCI	GTSAC	7 cut(s)	184, 380, 622, 1503, 1709, 1945, 2008
NsbI	TGCGCA	3 cut(s)	1346, 1446, 2126
NsiI	ATGCAT	1 cut(s)	1179
NspI	RCATGY	1 cut(s)	1703
NspV	TTCGAA	1 cut(s)	437
OliI	CACNNNNGTG	1 cut(s)	999
PaeR7I	CTCGAG	1 cut(s)	1096
PciI	ACATGT	1 cut(s)	1699
PciSI	GCTCTTC	1 cut(s)	2193
PcsI	WCGNNNNNNNCGW	1 cut(s)	1156
PctI	GAATGC	1 cut(s)	664
PfeI	GAWTC	9 cut(s)	494, 581, 646, 692, 964, 1421, 1438, 1582, 1607
PflFI	GACNNNGTC	1 cut(s)	1715
PflMI	CCANNNNNTGG	2 cut(s)	1037, 1335
PkrI	GCNGC	4 cut(s)	1268, 1776, 2205, 2247
PleI	GAGTC	6 cut(s)	181, 382, 778, 898, 914, 1510
PpsI	GAGTC	6 cut(s)	181, 382, 778, 898, 914, 1510
PpuMI	RGGWCCY	1 cut(s)	1199
PscI	ACATGT	1 cut(s)	1699
Psp5II	RGGWCCY	1 cut(s)	1199
Psp6I	CCWGG	5 cut(s)	368, 406, 1243, 1507, 2142
PspFI	CCCAGC	1 cut(s)	1195
PspGI	CCWGG	5 cut(s)	368, 406, 1243, 1507, 2142
PspPI	GGNCC	6 cut(s)	404, 707, 1040, 1199, 1309, 2034
PspPPI	RGGWCCY	1 cut(s)	1199
PstI	CTGCAG	1 cut(s)	2208
PsuI	RGATCY	7 cut(s)	82, 418, 824, 1792, 1994, 2185, 2287
PsyI	GACNNNGTC	1 cut(s)	1715
RsaI	GTAC	6 cut(s)	255, 784, 1121, 1300, 1517, 2138
RsaNI	GTAC	6 cut(s)	254, 783, 1120, 1299, 1516, 2137
RseI	CAYNNNNRTG	2 cut(s)	152, 999
SalI	GTCGAC	1 cut(s)	1898
SapI	GCTCTTC	1 cut(s)	2193
SaqAI	TTAA	8 cut(s)	563, 858, 957, 1107, 1304, 1665, 2070, 2094
SatI	GCNGC	4 cut(s)	1267, 1775, 2204, 2246
Sau96I	GGNCC	6 cut(s)	404, 707, 1040, 1199, 1309, 2034
SchI	GAGTC	6 cut(s)	181, 382, 779, 898, 914, 1511
ScrFI	CCNGG	7 cut(s)	370, 408, 1045, 1245, 1509, 1865, 2144
SduI	GDGCHC	1 cut(s)	1912
SfaNI	GCATC	6 cut(s)	130, 205, 601, 1164, 1332, 2277
SfcI	CTRYAG	2 cut(s)	2204, 2309
Sfr274I	CTCGAG	1 cut(s)	1096
SfuI	TTCGAA	1 cut(s)	437
SinI	GGWCC	5 cut(s)	404, 707, 1040, 1199, 2034
SlaI	CTCGAG	1 cut(s)	1096
SmiMI	CAYNNNNRTG	2 cut(s)	152, 999
SmlI	CTYRAG	5 cut(s)	241, 1096, 1601, 2069, 2078
SmoI	CTYRAG	5 cut(s)	241, 1096, 1601, 2069, 2078
Sse9I	AATT	8 cut(s)	127, 618, 1035, 1128, 1228, 1755, 2104, 2118
SsiI	CCGC	5 cut(s)	103, 416, 1267, 1339, 1982
SspMI	CTAG	2 cut(s)	585, 1728
StyD4I	CCNGG	7 cut(s)	368, 406, 1043, 1243, 1507, 1863, 2142
StyI	CCWWGG	3 cut(s)	400, 627, 1190
TaaI	ACNGT	7 cut(s)	599, 1515, 1835, 1882, 1897, 1945, 1960
TaiI	ACGT	3 cut(s)	1162, 1570, 1662
TaqI	TCGA	4 cut(s)	437, 644, 1097, 1899
TasI	AATT	8 cut(s)	127, 618, 1035, 1128, 1228, 1755, 2104, 2118
TatI	WGTACW	3 cut(s)	253, 1119, 2136
TauI	GCSGC	1 cut(s)	1269
TfiI	GAWTC	9 cut(s)	494, 581, 646, 692, 964, 1421, 1438, 1582, 1607
Tru1I	TTAA	8 cut(s)	563, 858, 957, 1107, 1304, 1665, 2070, 2094
Tru9I	TTAA	8 cut(s)	563, 858, 957, 1107, 1304, 1665, 2070, 2094
TscAI	CASTG	9 cut(s)	45, 580, 793, 1003, 1714, 1746, 1900, 1963, 2227
TseFI	GTSAC	7 cut(s)	184, 380, 622, 1503, 1709, 1945, 2008
TseI	GCWGC	3 cut(s)	1774, 2203, 2245
Tsp45I	GTSAC	7 cut(s)	184, 380, 622, 1503, 1709, 1945, 2008
TspGWI	ACGGA	1 cut(s)	344
TspRI	CASTG	9 cut(s)	45, 580, 793, 1003, 1714, 1746, 1900, 1963, 2227
Tth111I	GACNNNGTC	1 cut(s)	1715
Van91I	CCANNNNNTGG	2 cut(s)	1037, 1335
Vha464I	CTTAAG	1 cut(s)	2069
VpaK11BI	GGWCC	5 cut(s)	404, 707, 1040, 1199, 2034
XagI	CCTNNNNNAGG	1 cut(s)	2069
XapI	RAATTY	2 cut(s)	2104, 2118
XceI	RCATGY	1 cut(s)	1703
XhoI	CTCGAG	1 cut(s)	1096
XmiI	GTMKAC	2 cut(s)	569, 1899
XspI	CTAG	2 cut(s)	585, 1728
Zsp2I	ATGCAT	1 cut(s)	1179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.