Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007181

Physical Location & Seq

Genomic Coordinates Reverse (-)

10164562 .. 10168244

Gene Structure 3683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G010910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGCTTCGTCTACTATGGTGATCAAGGTCAAATATGGGGATACACTGAGGCGTTTCAATGCTCGTGTTGATGAGAATGATCAACTGGATCTTGACATGGGTGGACTGCGGTTCAAAATATTTAGTCTTTTCAATTTTCAGCTTGATGCTGACATCACTATGACCTATGTTGACGAAGATGGTGATATAGTGACTCTGGTTGATGATGAGGATTTGCGTGATGCTATGAGGCAGAATATGAAGTTCTTGAGGATTGATGTACATGATAAAACTGACAAATCTGAGAAATCTTATGCCAAATCAAGTGGAAGTTCTACCCCTGTAAGATATCCCTTGCCAGATATCACGCCTGAGCCTATCCGTGAACTAATCTCCAGGGTTCCTCGTGAGTTGACTCCAAACGCCCTTGGTCCAGGATTTGCGGATCTCGTTGACTGCTTTTCGAAGATGGGAATGTCCTATTTACTTCAGGCTGGTGGAGTTTCAGGCGTCAAGAATGATTCCTCTGAGAAACCCTTAGCTCCATCTGCCAATGATATGAAGGACGATGGTAAGTCAGAAACCATCTTAAAGTCTACCACTGAGGAGTCTAGCTCTAAAAACAGTCAGGCAAAGGATGCTGTAAATGTGACCAAGGATGTGGGAATGTCGAATCCACCTCAGAATGCTCCAGTTGATCTCAATGTTCTACCTGCTGATTCTAATCCATCTGGACCCACACCCATCAATGTTACACCAGTTGGATCAATTCTTCATACTGCTGAGGAGAGGAAGGAGTCAGAGAAGGGTACCAGTCGTCAGGTCAAGGGCAAGTCTCTTGGTTGTGGTGGATCTTCAAGTTCTGCTATCCCTGCATTGAATGTTAATGACATGAGCAATAATCATTTCAATCAATGTCCATTTTCAGAGACTCCTATTGTGAATGACTCGGCTCCTGTTGCATATCGTCGTCTTCATCCTTTTAAAAGGAATCATTCTGAAGCAATGGGTGGTATGTTCCACACTGGTGTTCGCTGTGATGGATGTGGTTGTCATCCAATAATTGGACCCCGGTTCAAGTCCATAGTGAAAGCGGATTATGACCTCTGCCGTATCTGTTTCTCGAGTATTGGTAATGTGGCTGAGTACATTAGAATTGACCACCCTTTACTTATCGCCATCCACGTCCTTTCAAGGGGATGCATGAACAAGTATCCTCCATGGCTGGGTCCTTCAGCATTGCCAAAGATACTGAGAAATTGTAGCGCGAAGCCTGGGCGACCTAAGCTTGACAGCCGCTTCGTTTTGGATGTCAACGTATTGGATGGTACCTTAATGGCCCCATCTACTCCATTTACCAAGATTTGGCGGATGCGCAACAATGGGGGTTTGATCTGGCCTAAAGGAACACAACTCATGTGGATTGGTGGAGACAGGTTTAGCAAATCAGATTCAGTTGAGATAGAGATTCCTGCGCATGGTGTATTGGCTGAAAATGAACTTGATATTGCTGTTGATTTTACTGCGCCTGAGTCACCTGGACGGTACATCTCATATTGGAGGATGGCTTCTCCATCTGGTCAGAAGTTTGGGCAACGTGTTTGGGTTCTGATTCAGGTGGATACTTCCCTCAAGGATTCATTCTTTGAGAGCTTTCAAGGTTTGAACCTGAACCTACCCCCTGAAAACGTGGTTAACTTTCCTGAGCATGTGGGCAGTGACTTTGTCCAGCCTTCTAGCTCTAACTCAGTGAAGGAACCAGCAATTCCCATTCCTGTCAAGCAGCCTGAAAATGAGCAGGATCTCAACTTCCCTATAAATGATAGCTTGCTGGTTGGCCACAGTATTCCTGCCCCTACTGCCCCGGTGGCTTCAACTGTGTCATACCCCACTGTCGACCAGAGTGCTCCAGTCCCTACTGCACAAGTTGCCTCTTCAACTGTGACATACCCCACTGTTGATATATTTGAACCAGCCCCGCCCTCCCCCAGATCTTCCCCTGTTGTCACTCTACCAACATCATCTGAAGGGACCAGCTCAGAAAATCCTGTGGAGGACACCCTCCTTAAGGAGCTTGAGGACATGGGATTTAAGCAGGCGAATTTGAACAAGGAAATTCTGCGTAGGAATGAGTACAACCTGGAGCAATCTGTGGATGATCTCTGTGAGGTTGCTGAATGGGATCCTATTCTTGAAGAGCTGCAGGAAATGGGCTTCAGTGATACAGAGATGAACAAGAAGCTGCTTGCGAAGAACAATGGAAGCATCAAGCGTGTGGTCATGGATCTTATCAATGGGGACAAGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005773 GO:0005829 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012505 GO:0016043 GO:0016236 GO:0022607 GO:0031410 GO:0031982 GO:0032182 GO:0034622 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0051258 GO:0051259 GO:0061919 GO:0065003 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

N_BRCA1_IG PB1 ZZ

Protein Analysis

762

Amino Acids

83.53

Weight (kDa)

5.11

Isoelectric Point (pI)

46.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1	PF00564	6 - 89	1.3e-08	PB1 domain
ZZ	PF00569	334 - 369	6.4e-09	Zinc finger, ZZ type
N_BRCA1_IG	PF16158	432 - 533	9.1e-33	Ig-like domain from next to BRCA1 gene
UBA_NBR1_C	PF24932	678 - 717	8.1e-23	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain
UBA_NBR1_C	PF24932	720 - 757	4e-11	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24690
fragaria_vesca	FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270
malus_domestica	MD06G1165900.v1.1 MD14G1171800.v1.1
prunus_persica	Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1
pyrus_communis	pycom06g14840 pycom14g14340
rosa_chinensis	RchiOBHm_Chr7g0192591
rosa_laevigata	RLG00000004349
rosa_multiflora	Rmu_sc0003108.1_g000043
rosa_roxburghii	Rroxscaffold_3G00262920
rosa_rugosa	Rorug07G0002500
rosa_samantha	Rh7AG126900 Rh7BG129200 Rh7CG131000 Rh7DG130300
rosa_wichuraiana	Rw7G010910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1355, 1455
Acc36I	ACCTGC	1 cut(s)	700
Acc65I	GGTACC	2 cut(s)	788, 1307
AccB1I	GGYRCC	2 cut(s)	788, 1307
AccB7I	CCANNNNNTGG	2 cut(s)	1043, 1344
AccI	GTMKAC	3 cut(s)	11, 575, 1875
AccII	CGCG	1 cut(s)	1247
AciI	CCGC	6 cut(s)	109, 422, 1073, 1276, 1348, 1958
AclWI	GGATC	8 cut(s)	96, 432, 751, 838, 1788, 2156, 2169, 2271
AcoI	YGGCCR	1 cut(s)	1816
AcsI	RAATTY	2 cut(s)	2080, 2094
AcuI	CTGAAG	5 cut(s)	452, 999, 1197, 2025, 2179
AcyI	GRCGYC	1 cut(s)	489
AfaI	GTAC	6 cut(s)	261, 790, 1127, 1309, 1526, 2114
AfiI	CCNNNNNNNGG	6 cut(s)	1043, 1174, 1205, 1344, 1457, 2047
AflII	CTTAAG	1 cut(s)	2045
AflIII	ACRYGT	1 cut(s)	1576
AjiI	CACGTC	1 cut(s)	1165
AjnI	CCWGG	5 cut(s)	374, 412, 1252, 1516, 2118
AleI	CACNNNNGTG	1 cut(s)	1005
Alw21I	GWGCWC	1 cut(s)	1888
Alw26I	GTCTC	3 cut(s)	819, 902, 1404
AlwI	GGATC	8 cut(s)	96, 432, 751, 838, 1788, 2156, 2169, 2271
Ama87I	CYCGRG	1 cut(s)	1102
AoxI	GGCC	3 cut(s)	1317, 1376, 1816
ApeKI	GCWGC	3 cut(s)	1762, 2179, 2221
ApoI	RAATTY	2 cut(s)	2080, 2094
ArsI	GACNNNNNNTTYG	2 cut(s)	1262, 1294
Asp718I	GGTACC	2 cut(s)	788, 1307
AspLEI	GCGC	4 cut(s)	1247, 1356, 1456, 1507
AspS9I	GGNCC	6 cut(s)	410, 713, 1046, 1208, 1318, 2010
AsuC2I	CCSGG	2 cut(s)	1051, 1844
AsuHPI	GGTGA	3 cut(s)	31, 194, 1506
AsuII	TTCGAA	1 cut(s)	443
AvaI	CYCGRG	1 cut(s)	1102
AvaII	GGWCC	5 cut(s)	410, 713, 1046, 1208, 2010
BalI	TGGCCA	1 cut(s)	1818
BamHI	GGATCC	1 cut(s)	2161
BanI	GGYRCC	2 cut(s)	788, 1307
BauI	CACGAG	2 cut(s)	63, 384
BbsI	GAAGAC	1 cut(s)	944
Bbv12I	GWGCWC	1 cut(s)	1888
BbvCI	CCTCAGC	1 cut(s)	762
BbvI	GCAGC	3 cut(s)	1774, 2166, 2208
BceAI	ACGGC	1 cut(s)	1074
BcgI	CGANNNNNNTGC	2 cut(s)	1865, 1899
BciT130I	CCWGG	5 cut(s)	376, 414, 1254, 1518, 2120
BciVI	GTATCC	3 cut(s)	34, 1203, 1594
BclI	TGATCA	2 cut(s)	21, 79
BcnI	CCSGG	2 cut(s)	1051, 1844
BcoDI	GTCTC	3 cut(s)	819, 902, 1404
BfaI	CTAG	2 cut(s)	591, 1716
BfmI	CTRYAG	2 cut(s)	2180, 2285
BfrI	CTTAAG	1 cut(s)	2045
BfuAI	ACCTGC	1 cut(s)	700
BfuI	GTATCC	3 cut(s)	34, 1203, 1594
BglI	GCCNNNNNGGC	1 cut(s)	1847
BglII	AGATCT	1 cut(s)	1970
BisI	GCNGC	4 cut(s)	1276, 1763, 2180, 2222
BlsI	GCNGC	4 cut(s)	1277, 1764, 2181, 2223
Bme1390I	CCNGG	7 cut(s)	376, 414, 1051, 1254, 1518, 1844, 2120
Bme18I	GGWCC	5 cut(s)	410, 713, 1046, 1208, 2010
BmeT110I	CYCGRG	1 cut(s)	1102
BmgBI	CACGTC	1 cut(s)	1165
BmgT120I	GGNCC	6 cut(s)	410, 713, 1046, 1208, 1318, 2010
BmrFI	CCNGG	7 cut(s)	376, 414, 1051, 1254, 1518, 1844, 2120
BmsI	GCATC	6 cut(s)	136, 211, 607, 1169, 1341, 2253
BpiI	GAAGAC	1 cut(s)	944
BplI	GAGNNNNNCTC	2 cut(s)	578, 610
BpmI	CTGGAG	4 cut(s)	358, 654, 1872, 2141
Bpu10I	CCTNAGC	5 cut(s)	351, 517, 762, 1263, 1683
Bpu14I	TTCGAA	1 cut(s)	443
BpuEI	CTTGAG	3 cut(s)	268, 1595, 2075
BpuMI	CCSGG	2 cut(s)	1051, 1844
BsaBI	GATNNNNATC	1 cut(s)	702
BsaHI	GRCGYC	1 cut(s)	489
BsaJI	CCNNGG	7 cut(s)	375, 406, 633, 1049, 1199, 1253, 1842
Bsc4I	CCNNNNNNNGG	6 cut(s)	1043, 1174, 1205, 1344, 1457, 2047
Bse1I	ACTGG	6 cut(s)	90, 671, 737, 792, 1009, 1889
Bse3DI	GCAATG	2 cut(s)	990, 1217
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	5 cut(s)	376, 414, 1254, 1518, 2120
BseDI	CCNNGG	7 cut(s)	375, 406, 633, 1049, 1199, 1253, 1842
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	6 cut(s)	1043, 1174, 1205, 1344, 1457, 2047
BseMI	GCAATG	2 cut(s)	990, 1217
BseNI	ACTGG	6 cut(s)	90, 671, 737, 792, 1009, 1889
BseRI	GAGGAG	2 cut(s)	599, 779
BseXI	GCAGC	3 cut(s)	1774, 2166, 2208
BseYI	CCCAGC	1 cut(s)	1204
BsgI	GTGCAG	1 cut(s)	1884
Bsh1236I	CGCG	1 cut(s)	1247
BshFI	GGCC	3 cut(s)	1319, 1378, 1818
BshNI	GGYRCC	2 cut(s)	788, 1307
BsiHKAI	GWGCWC	1 cut(s)	1888
BsiHKCI	CYCGRG	1 cut(s)	1102
BsiSI	CCGG	2 cut(s)	1051, 1844
BslFI	GGGAC	2 cut(s)	1877, 2023
BslI	CCNNNNNNNGG	6 cut(s)	1043, 1174, 1205, 1344, 1457, 2047
BsmAI	GTCTC	3 cut(s)	819, 902, 1404
BsmFI	GGGAC	2 cut(s)	1877, 2023
BsmI	GAATGC	1 cut(s)	670
BsnI	GGCC	3 cut(s)	1319, 1378, 1818
BsoBI	CYCGRG	1 cut(s)	1102
Bsp119I	TTCGAA	1 cut(s)	443
Bsp1286I	GDGCHC	1 cut(s)	1888
Bsp1407I	TGTACA	1 cut(s)	259
Bsp19I	CCATGG	1 cut(s)	1199
BspACI	CCGC	6 cut(s)	109, 422, 1073, 1276, 1348, 1958
BspANI	GGCC	3 cut(s)	1319, 1378, 1818
BspFNI	CGCG	1 cut(s)	1247
BspMAI	CTGCAG	1 cut(s)	2184
BspMI	ACCTGC	1 cut(s)	700
BspPI	GGATC	8 cut(s)	96, 432, 751, 838, 1788, 2156, 2169, 2271
BspQI	GCTCTTC	1 cut(s)	2169
BspT104I	TTCGAA	1 cut(s)	443
BspT107I	GGYRCC	2 cut(s)	788, 1307
BspTI	CTTAAG	1 cut(s)	2045
BsrDI	GCAATG	2 cut(s)	990, 1217
BsrGI	TGTACA	1 cut(s)	259
BsrI	ACTGG	6 cut(s)	90, 671, 737, 792, 1009, 1889
BssECI	CCNNGG	7 cut(s)	375, 406, 633, 1049, 1199, 1253, 1842
BssNI	GRCGYC	1 cut(s)	489
BssSI	CACGAG	2 cut(s)	63, 384
BssT1I	CCWWGG	3 cut(s)	406, 633, 1199
Bst2BI	CACGAG	2 cut(s)	63, 384
Bst2UI	CCWGG	5 cut(s)	376, 414, 1254, 1518, 2120
Bst4CI	ACNGT	7 cut(s)	605, 1524, 1823, 1858, 1873, 1921, 1936
Bst6I	CTCTTC	2 cut(s)	1918, 2169
BstACI	GRCGYC	1 cut(s)	489
BstAFI	CTTAAG	1 cut(s)	2045
BstAPI	GCANNNNNTGC	2 cut(s)	617, 1907
BstAUI	TGTACA	1 cut(s)	259
BstBI	TTCGAA	1 cut(s)	443
BstC8I	GCNNGC	3 cut(s)	1808, 2076, 2226
BstDSI	CCRYGG	1 cut(s)	1199
BstENI	CCTNNNNNAGG	1 cut(s)	2045
BstFNI	CGCG	1 cut(s)	1247
BstHHI	GCGC	4 cut(s)	1247, 1356, 1456, 1507
BstMAI	GTCTC	3 cut(s)	819, 902, 1404
BstMWI	GCNNNNNNNGC	8 cut(s)	527, 617, 851, 938, 1264, 1838, 1847, 1907
BstNI	CCWGG	5 cut(s)	376, 414, 1254, 1518, 2120
BstNSI	RCATGY	1 cut(s)	1691
BstSCI	CCNGG	7 cut(s)	374, 412, 1049, 1252, 1516, 1842, 2118
BstSFI	CTRYAG	2 cut(s)	2180, 2285
BstUI	CGCG	1 cut(s)	1247
BstV1I	GCAGC	3 cut(s)	1774, 2166, 2208
BstV2I	GAAGAC	1 cut(s)	944
BstX2I	RGATCY	7 cut(s)	88, 424, 830, 1780, 1970, 2161, 2263
BstXI	CCANNNNNNTGG	1 cut(s)	640
BstYI	RGATCY	7 cut(s)	88, 424, 830, 1780, 1970, 2161, 2263
BsuI	GTATCC	3 cut(s)	34, 1203, 1594
BsuRI	GGCC	3 cut(s)	1319, 1378, 1818
BtgI	CCRYGG	1 cut(s)	1199
BtrI	CACGTC	1 cut(s)	1165
BtsI	GCAGTG	1 cut(s)	1702
BtsIMutI	CAGTG	8 cut(s)	44, 579, 1002, 1702, 1734, 1869, 1932, 2203
BveI	ACCTGC	1 cut(s)	700
Cac8I	GCNNGC	3 cut(s)	1808, 2076, 2226
CfoI	GCGC	4 cut(s)	1247, 1356, 1456, 1507
Cfr13I	GGNCC	6 cut(s)	410, 713, 1046, 1208, 1318, 2010
CseI	GACGC	1 cut(s)	478
Csp6I	GTAC	6 cut(s)	260, 789, 1126, 1308, 1525, 2113
CspCI	CAANNNNNGTGG	4 cut(s)	286, 321, 1379, 1414
CviQI	GTAC	6 cut(s)	260, 789, 1126, 1308, 1525, 2113
DraI	TTTAAA	1 cut(s)	964
EaeI	YGGCCR	1 cut(s)	1816
Eam1104I	CTCTTC	2 cut(s)	1918, 2169
EarI	CTCTTC	2 cut(s)	1918, 2169
EciI	GGCGGA	1 cut(s)	1363
Eco130I	CCWWGG	3 cut(s)	406, 633, 1199
Eco32I	GATATC	2 cut(s)	329, 343
Eco47I	GGWCC	5 cut(s)	410, 713, 1046, 1208, 2010
Eco57I	CTGAAG	5 cut(s)	452, 999, 1197, 2025, 2179
Eco88I	CYCGRG	1 cut(s)	1102
EcoNI	CCTNNNNNAGG	1 cut(s)	2045
EcoO109I	RGGNCCY	1 cut(s)	1208
EcoRII	CCWGG	5 cut(s)	374, 412, 1252, 1516, 2118
EcoRV	GATATC	2 cut(s)	329, 343
EcoT14I	CCWWGG	3 cut(s)	406, 633, 1199
EcoT22I	ATGCAT	1 cut(s)	1184
ErhI	CCWWGG	3 cut(s)	406, 633, 1199
FaqI	GGGAC	2 cut(s)	1877, 2023
FauI	CCCGC	1 cut(s)	1965
FbaI	TGATCA	2 cut(s)	21, 79
FblI	GTMKAC	3 cut(s)	11, 575, 1875
Fnu4HI	GCNGC	4 cut(s)	1276, 1763, 2180, 2222
Fsp4HI	GCNGC	4 cut(s)	1276, 1763, 2180, 2222
FspBI	CTAG	2 cut(s)	591, 1716
FspI	TGCGCA	2 cut(s)	1355, 1455
GlaI	GCGC	4 cut(s)	1246, 1355, 1455, 1506
GluI	GCNGC	4 cut(s)	1276, 1763, 2180, 2222
GsaI	CCCAGC	1 cut(s)	1208
GsuI	CTGGAG	4 cut(s)	358, 654, 1872, 2141
HaeIII	GGCC	3 cut(s)	1319, 1378, 1818
HapII	CCGG	2 cut(s)	1051, 1844
HgaI	GACGC	1 cut(s)	478
HhaI	GCGC	4 cut(s)	1247, 1356, 1456, 1507
Hin1I	GRCGYC	1 cut(s)	489
Hin6I	GCGC	4 cut(s)	1245, 1354, 1454, 1505
HinP1I	GCGC	4 cut(s)	1245, 1354, 1454, 1505
HincII	GTYRAC	6 cut(s)	172, 393, 433, 1294, 1675, 1876
HindII	GTYRAC	6 cut(s)	172, 393, 433, 1294, 1675, 1876
HindIII	AAGCTT	1 cut(s)	1265
HpaI	GTTAAC	1 cut(s)	1675
HpaII	CCGG	2 cut(s)	1051, 1844
HphI	GGTGA	3 cut(s)	31, 194, 1506
Hpy188III	TCNNGA	8 cut(s)	92, 247, 386, 493, 711, 1102, 1682, 2171
Hpy99I	CGWCG	1 cut(s)	951
HpyAV	CCTTC	7 cut(s)	535, 766, 778, 1221, 1722, 1726, 2000
HpyCH4III	ACNGT	7 cut(s)	605, 1524, 1823, 1858, 1873, 1921, 1936
HpyCH4IV	ACGT	4 cut(s)	1164, 1296, 1576, 1668
HpyCH4V	TGCA	5 cut(s)	854, 941, 1182, 1901, 2182
HpyF10VI	GCNNNNNNNGC	8 cut(s)	527, 617, 851, 938, 1264, 1838, 1847, 1907
HpySE526I	ACGT	4 cut(s)	1164, 1296, 1576, 1668
Hsp92I	GRCGYC	1 cut(s)	489
HspAI	GCGC	4 cut(s)	1245, 1354, 1454, 1505
KpnI	GGTACC	2 cut(s)	792, 1311
Ksp22I	TGATCA	2 cut(s)	21, 79
KspAI	GTTAAC	1 cut(s)	1675
LguI	GCTCTTC	1 cut(s)	2169
LmnI	GCTCC	6 cut(s)	526, 673, 937, 1891, 2050, 2122
Lsp1109I	GCAGC	3 cut(s)	1774, 2166, 2208
LweI	GCATC	6 cut(s)	136, 211, 607, 1169, 1341, 2253
MaeI	CTAG	2 cut(s)	591, 1716
MaeII	ACGT	4 cut(s)	1164, 1296, 1576, 1668
MaeIII	GTNAC	7 cut(s)	190, 628, 730, 1512, 1697, 1921, 1984
MboII	GAAGA	9 cut(s)	188, 457, 743, 825, 944, 1905, 1965, 2186, 2242
MflI	RGATCY	7 cut(s)	88, 424, 830, 1780, 1970, 2161, 2263
MhlI	GDGCHC	1 cut(s)	1888
MlsI	TGGCCA	1 cut(s)	1818
MluCI	AATT	8 cut(s)	133, 747, 1041, 1134, 1237, 1743, 2080, 2094
MluNI	TGGCCA	1 cut(s)	1818
MlyI	GAGTC	7 cut(s)	187, 388, 596, 785, 904, 920, 1520
MmeI	TCCRAC	1 cut(s)	721
Mox20I	TGGCCA	1 cut(s)	1818
Mph1103I	ATGCAT	1 cut(s)	1184
MscI	TGGCCA	1 cut(s)	1818
MseI	TTAA	7 cut(s)	569, 864, 963, 1313, 1674, 2046, 2070
MslI	CAYNNNNRTG	2 cut(s)	158, 1005
Msp20I	TGGCCA	1 cut(s)	1818
MspCI	CTTAAG	1 cut(s)	2045
MspI	CCGG	2 cut(s)	1051, 1844
MspR9I	CCNGG	7 cut(s)	376, 414, 1051, 1254, 1518, 1844, 2120
Mva1269I	GAATGC	1 cut(s)	670
MvaI	CCWGG	5 cut(s)	376, 414, 1254, 1518, 2120
MvnI	CGCG	1 cut(s)	1247
MwoI	GCNNNNNNNGC	8 cut(s)	527, 617, 851, 938, 1264, 1838, 1847, 1907
NciI	CCSGG	2 cut(s)	1051, 1844
NcoI	CCATGG	1 cut(s)	1199
NmeAIII	GCCGAG	1 cut(s)	908
NmuCI	GTSAC	6 cut(s)	190, 628, 1512, 1697, 1921, 1984
NsbI	TGCGCA	2 cut(s)	1355, 1455
NsiI	ATGCAT	1 cut(s)	1184
NspI	RCATGY	1 cut(s)	1691
NspV	TTCGAA	1 cut(s)	443
OliI	CACNNNNGTG	1 cut(s)	1005
PaeR7I	CTCGAG	1 cut(s)	1102
PciSI	GCTCTTC	1 cut(s)	2169
PcsI	WCGNNNNNNNCGW	1 cut(s)	1161
PctI	GAATGC	1 cut(s)	670
PfeI	GAWTC	8 cut(s)	500, 652, 698, 970, 1430, 1447, 1591, 1616
PflFI	GACNNNGTC	1 cut(s)	1703
PflMI	CCANNNNNTGG	2 cut(s)	1043, 1344
PfoI	TCCNGGA	1 cut(s)	412
PkrI	GCNGC	4 cut(s)	1277, 1764, 2181, 2223
PleI	GAGTC	7 cut(s)	187, 388, 595, 784, 904, 920, 1519
PpsI	GAGTC	7 cut(s)	187, 388, 595, 784, 904, 920, 1519
PpuMI	RGGWCCY	1 cut(s)	1208
Psp5II	RGGWCCY	1 cut(s)	1208
Psp6I	CCWGG	5 cut(s)	374, 412, 1252, 1516, 2118
PspFI	CCCAGC	1 cut(s)	1204
PspGI	CCWGG	5 cut(s)	374, 412, 1252, 1516, 2118
PspPI	GGNCC	6 cut(s)	410, 713, 1046, 1208, 1318, 2010
PspPPI	RGGWCCY	1 cut(s)	1208
PstI	CTGCAG	1 cut(s)	2184
PsuI	RGATCY	7 cut(s)	88, 424, 830, 1780, 1970, 2161, 2263
PsyI	GACNNNGTC	1 cut(s)	1703
RsaI	GTAC	6 cut(s)	261, 790, 1127, 1309, 1526, 2114
RsaNI	GTAC	6 cut(s)	260, 789, 1126, 1308, 1525, 2113
RseI	CAYNNNNRTG	2 cut(s)	158, 1005
SalI	GTCGAC	1 cut(s)	1874
SapI	GCTCTTC	1 cut(s)	2169
SaqAI	TTAA	7 cut(s)	569, 864, 963, 1313, 1674, 2046, 2070
SatI	GCNGC	4 cut(s)	1276, 1763, 2180, 2222
Sau96I	GGNCC	6 cut(s)	410, 713, 1046, 1208, 1318, 2010
SchI	GAGTC	7 cut(s)	187, 388, 596, 785, 904, 920, 1520
ScrFI	CCNGG	7 cut(s)	376, 414, 1051, 1254, 1518, 1844, 2120
SduI	GDGCHC	1 cut(s)	1888
SfaNI	GCATC	6 cut(s)	136, 211, 607, 1169, 1341, 2253
SfcI	CTRYAG	2 cut(s)	2180, 2285
Sfr274I	CTCGAG	1 cut(s)	1102
SfuI	TTCGAA	1 cut(s)	443
SinI	GGWCC	5 cut(s)	410, 713, 1046, 1208, 2010
SlaI	CTCGAG	1 cut(s)	1102
SmiMI	CAYNNNNRTG	2 cut(s)	158, 1005
SmlI	CTYRAG	5 cut(s)	247, 1102, 1610, 2045, 2054
SmoI	CTYRAG	5 cut(s)	247, 1102, 1610, 2045, 2054
Sse9I	AATT	8 cut(s)	133, 747, 1041, 1134, 1237, 1743, 2080, 2094
SsiI	CCGC	6 cut(s)	109, 422, 1073, 1276, 1348, 1958
SspI	AATATT	1 cut(s)	120
SspMI	CTAG	2 cut(s)	591, 1716
StyD4I	CCNGG	7 cut(s)	374, 412, 1049, 1252, 1516, 1842, 2118
StyI	CCWWGG	3 cut(s)	406, 633, 1199
TaaI	ACNGT	7 cut(s)	605, 1524, 1823, 1858, 1873, 1921, 1936
TaiI	ACGT	4 cut(s)	1167, 1299, 1579, 1671
TaqI	TCGA	4 cut(s)	443, 650, 1103, 1875
TasI	AATT	8 cut(s)	133, 747, 1041, 1134, 1237, 1743, 2080, 2094
TatI	WGTACW	3 cut(s)	259, 1125, 2112
TauI	GCSGC	1 cut(s)	1278
TfiI	GAWTC	8 cut(s)	500, 652, 698, 970, 1430, 1447, 1591, 1616
Tru1I	TTAA	7 cut(s)	569, 864, 963, 1313, 1674, 2046, 2070
Tru9I	TTAA	7 cut(s)	569, 864, 963, 1313, 1674, 2046, 2070
TscAI	CASTG	8 cut(s)	51, 586, 1009, 1702, 1734, 1876, 1939, 2203
TseFI	GTSAC	6 cut(s)	190, 628, 1512, 1697, 1921, 1984
TseI	GCWGC	3 cut(s)	1762, 2179, 2221
Tsp45I	GTSAC	6 cut(s)	190, 628, 1512, 1697, 1921, 1984
TspDTI	ATGAA	8 cut(s)	254, 554, 743, 944, 1199, 1491, 1608, 2225
TspGWI	ACGGA	1 cut(s)	350
TspRI	CASTG	8 cut(s)	51, 586, 1009, 1702, 1734, 1876, 1939, 2203
Tth111I	GACNNNGTC	1 cut(s)	1703
Van91I	CCANNNNNTGG	2 cut(s)	1043, 1344
Vha464I	CTTAAG	1 cut(s)	2045
VpaK11BI	GGWCC	5 cut(s)	410, 713, 1046, 1208, 2010
XagI	CCTNNNNNAGG	1 cut(s)	2045
XapI	RAATTY	2 cut(s)	2080, 2094
XceI	RCATGY	1 cut(s)	1691
XhoI	CTCGAG	1 cut(s)	1102
XmiI	GTMKAC	3 cut(s)	11, 575, 1875
XspI	CTAG	2 cut(s)	591, 1716
Zsp2I	ATGCAT	1 cut(s)	1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.