Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007181

Physical Location & Seq

Genomic Coordinates Reverse (-)

26554578 .. 26558919

Gene Structure 4342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1171800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGGGTCGTCGACCAAGGTCATCAAGGTTCAATATGCGGAAACACTGAGGCGTTTCAATGCTAGTGTCAATGAGAACAATCAACTGGATCTTGACATGGTTGGATTGCGAGAAAAGATCTTGAGTCTTTTCAATCTCCGCCCTGATGCTGACATTACTATGACGTACATTGATGAAGATGGTGATGAAGTGACTCTTGTTGATGATGGTGATCTGCATGACACGATGAGGCAGAAGCTCAAATTCTTGAAGATATTTGTACAGATTAACAAGGATAAATCTGCCAAGTCAAGTGGAGGTTCTACTCCTTTGAGGTCCCCTCAAGGTCCACCTCCAGTACCAAATTTTGATGCTGGTGCGGCACTGAAGTCCCTGCCAGAGCCATTTCGGGAATTTGCTTCTAAGTTTCCTCTTGAATTGGCTTCAAAATCTGCATCATCCAGTCCGGTGTTTGCGGAGCTTGTTGACTGGTTTTCAAAGATGGGCCTATCGTACTTGATTCCAGATGCCCAGGTTCAGACCGCTGGAGATTCAAGCAAGCAGAGCGGCGCCTCTGGGAGTGCCGTTGCTCCATCAGCTGCTGGTAATTCAAATGATCTGAAGGGTGATGGCAAGTCAAAACCCATCTTAAAGTCTGCAGCTGAGGAATCAAGCACCAAAAAAGGTCAGGCAACGGATTCTGTGAATGTGACCAAGGATGTGGGGATGTCTGCTCCACCTCTTCATGCAACTGTTGATCTCAATTTCCTTCCTACTGATTCTAATCTATCAGGATCCACGCCTGTAAATGGTGCACCAGCTGGATCAAGTTTTCACACCAGTGAGGCAAGGAAGGAGTCTAAGGAGCTTCCCAATGGTCTTCTCAATATTCAAAAGAAACTTCACAGCAAGAAGCCTTTTGGTTGTGAGACTCCCATTGCAAATGACTCAGCTACTCCTGCTGCCTCTCGGCGTATTCCTTTCAAAAGAAATCACTCCAAAGCGATGGGTGGAATGTTCCACACAGGTGTTCAGTGTGATGGCTGTGATTGTCATCCAATTGTTGGACCTCGATTCAAGTCAATAGTGAAAGAAAATTATGACCTCTGTCAGATTTGTTTTGCAAGTAAGGGTAGTGCGACTGATTACGTTAGGATTGACCGCCCTATCTCTTATCGTCATCCACAGCCCTTCAAGGGGTTGTATGAGCAACCTCCATGGGTCGGCCCCCCAGTTATGCCAAAAATCTTGAGAGGTTTAAGTATGAACCCAGGCCACCCTAAGCTTGATAGCCACTTTGTATTGGATGTCAATGTAATGGATGGTACATTAATAGCCCCATCTACTCCATTTACCAAAATATGGCGGATGCGCAACAACGGTAGTATGGTGTGGCCTCAAGGAACAACACTTGTGTGGATTGGGGGTGACAGATTTAGCAATTCAGATTCAGTCGAGATAGAGATTCCTGCGGATGGTGTGCCGGCTGAAAATGAACTCGATATTGCCGTTGATTTTACTGCCCCCGATTCACCTGGTCACTACATCTCACACTGGAGGATGGCAACCCCGTCTGGCCAAAAGTTTGGTCAACGTGTTTGGGTTCTGATCCAGGTTGATGCTTCCTTGAAGGATTCATTCTTTGAGAGCTTTCAAGGTCTGAACTTGAATTTGCCCCCAAAAGAATATGAAAAAATGGATGTGAACGTTCAACCAGCTGCTGTCAGTGACCTTCTCCAGCCTTCTGCTTCTACCCCACTCAAGGAACCGGTGAAGCCCGTGCCTACTGAACAGCCTGGACATGACCAGGAGCTCCACTTCCCCATCAACGATAGCTTGCTGGTTGGCCACAGTGCCTCTGCCCCTACTGAGCCACAGGGTCCTTCAACTGTGTCGTATCCCACTGTTGAGCCACAGGGTTCAACTGTGTCGTATCCCACTGTTGAGCCACAGGGTTCGACTGTGTCGTATCCCATGGTTGATATCTATGAATCAGCCCCACCCTCCCCCAAATCACCACCTGCTGTCAATGCACCGGCATCATCTGAAGGGACCAGTTCAAACAATGCTGTGGAAGATACCATGCTGAAGGAGCTCGAGGCGATGGGGTTTAAGCAGGTCAATTTGAACAAGGAGATTCTGCGTAGGAATGACTACAACCTGGAGCAGTCTGTCGAAGATCTCTGCGAGGTTTCGGACTGGGATCCTATCCTTGAGGAGCTGCAGGAAATGGGTTTCTGTGATACCGAAATGAACAAGAAGCTGCTGGTGAAGAACAATGGAAGCATCAAGCGTGTGGTTATGGATCTGATCAACGGGGAGCCGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005773 GO:0005829 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012505 GO:0016043 GO:0016236 GO:0022607 GO:0031410 GO:0031982 GO:0032182 GO:0034622 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0051258 GO:0051259 GO:0061919 GO:0065003 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

N_BRCA1_IG PB1 ZZ

Protein Analysis

770

Amino Acids

83.52

Weight (kDa)

5.28

Isoelectric Point (pI)

45.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1	PF00564	7 - 88	3.6e-09	PB1 domain
ZZ	PF00569	334 - 370	6.9e-09	Zinc finger, ZZ type
N_BRCA1_IG	PF16158	431 - 532	1.3e-33	Ig-like domain from next to BRCA1 gene
UBA_NBR1_C	PF24932	685 - 724	1.6e-22	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain
UBA_NBR1_C	PF24932	727 - 764	8.5e-10	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24690
fragaria_vesca	FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270
malus_domestica	MD06G1165900.v1.1 MD14G1171800.v1.1
prunus_persica	Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1
pyrus_communis	pycom06g14840 pycom14g14340
rosa_chinensis	RchiOBHm_Chr7g0192591
rosa_laevigata	RLG00000004349
rosa_multiflora	Rmu_sc0003108.1_g000043
rosa_roxburghii	Rroxscaffold_3G00262920
rosa_rugosa	Rorug07G0002500
rosa_samantha	Rh7AG126900 Rh7BG129200 Rh7CG131000 Rh7DG130300
rosa_wichuraiana	Rw7G010910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2008
Acc16I	TGCGCA	1 cut(s)	1352
Acc36I	ACCTGC	2 cut(s)	2008, 2086
AccB1I	GGYRCC	1 cut(s)	548
AccB7I	CCANNNNNTGG	2 cut(s)	1043, 1341
AccBSI	CCGCTC	1 cut(s)	546
AccI	GTMKAC	1 cut(s)	11
AclI	AACGTT	1 cut(s)	1686
AclWI	GGATC	8 cut(s)	96, 768, 781, 811, 1582, 2177, 2190, 2292
AcoI	YGGCCR	2 cut(s)	1555, 1825
AcsI	RAATTY	4 cut(s)	242, 343, 392, 1648
AcuI	CTGAAG	4 cut(s)	386, 620, 2046, 2087
AcyI	GRCGYC	1 cut(s)	549
AfaI	GTAC	5 cut(s)	167, 261, 339, 494, 1306
AfiI	CCNNNNNNNGG	8 cut(s)	788, 1043, 1175, 1176, 1202, 1341, 1454, 1741
AflIII	ACRYGT	1 cut(s)	1573
AgeI	ACCGGT	1 cut(s)	1747
AjnI	CCWGG	7 cut(s)	510, 1249, 1513, 1590, 1774, 1785, 2139
AleI	CACNNNNGTG	3 cut(s)	819, 1005, 1393
Alw21I	GWGCWC	3 cut(s)	796, 1794, 2076
Alw26I	GTCTC	1 cut(s)	902
Alw44I	GTGCAC	1 cut(s)	792
AlwI	GGATC	8 cut(s)	96, 768, 781, 811, 1582, 2177, 2190, 2292
AlwNI	CAGNNNCTG	2 cut(s)	581, 1700
Ama87I	CYCGRG	1 cut(s)	2075
AoxI	GGCC	6 cut(s)	484, 1204, 1252, 1373, 1555, 1825
ApaLI	GTGCAC	1 cut(s)	792
ApeKI	GCWGC	6 cut(s)	578, 638, 941, 1697, 2200, 2242
ApoI	RAATTY	4 cut(s)	242, 343, 392, 1648
ArsI	GACNNNNNNTTYG	2 cut(s)	1552, 1584
AseI	ATTAAT	1 cut(s)	1310
AsiGI	ACCGGT	1 cut(s)	1747
AspLEI	GCGC	2 cut(s)	551, 1353
AspS9I	GGNCC	7 cut(s)	315, 326, 484, 1046, 1205, 1859, 2031
AsuHPI	GGTGA	8 cut(s)	194, 221, 617, 1418, 1503, 1762, 1986, 2260
AvaI	CYCGRG	1 cut(s)	2075
AvaII	GGWCC	5 cut(s)	315, 326, 1046, 1859, 2031
BaeGI	GKGCMC	1 cut(s)	796
BalI	TGGCCA	2 cut(s)	1557, 1827
BamHI	GGATCC	2 cut(s)	773, 2182
BanI	GGYRCC	1 cut(s)	548
BanII	GRGCYC	2 cut(s)	1794, 2076
BbsI	GAAGAC	1 cut(s)	851
Bbv12I	GWGCWC	3 cut(s)	796, 1794, 2076
BbvCI	CCTCAGC	1 cut(s)	642
BbvI	GCAGC	6 cut(s)	565, 650, 928, 1684, 2187, 2229
BceAI	ACGGC	2 cut(s)	548, 1472
BciT130I	CCWGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
BciVI	GTATCC	3 cut(s)	1887, 1923, 1959
BclI	TGATCA	1 cut(s)	2289
BcoDI	GTCTC	1 cut(s)	902
BfaI	CTAG	1 cut(s)	63
BfmI	CTRYAG	2 cut(s)	636, 2201
BfoI	RGCGCY	1 cut(s)	552
BfuAI	ACCTGC	2 cut(s)	2008, 2086
BfuI	GTATCC	3 cut(s)	1887, 1923, 1959
BglII	AGATCT	2 cut(s)	117, 2158
BisI	GCNGC	9 cut(s)	360, 547, 579, 639, 942, 1698, 2201, 2243, 2303
BlsI	GCNGC	9 cut(s)	361, 548, 580, 640, 943, 1699, 2202, 2244, 2304
Bme1390I	CCNGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
Bme18I	GGWCC	5 cut(s)	315, 326, 1046, 1859, 2031
BmeT110I	CYCGRG	1 cut(s)	2075
BmgT120I	GGNCC	7 cut(s)	315, 326, 484, 1046, 1205, 1859, 2031
BmiI	GGNNCC	9 cut(s)	317, 550, 775, 1207, 1746, 1860, 2032, 2184, 2301
BmrFI	CCNGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
BmrI	ACTGGG	2 cut(s)	1205, 2188
BmsI	GCATC	8 cut(s)	136, 340, 443, 496, 1338, 1588, 2027, 2274
BmuI	ACTGGG	2 cut(s)	1205, 2188
BoxI	GACNNNNGTC	2 cut(s)	17, 1086
BpiI	GAAGAC	1 cut(s)	851
BplI	GAGNNNNNCTC	2 cut(s)	304, 336
BpmI	CTGGAG	5 cut(s)	318, 546, 1555, 1700, 2162
Bpu10I	CCTNAGC	2 cut(s)	642, 1260
BpuEI	CTTGAG	6 cut(s)	142, 306, 1249, 1362, 1724, 2213
BsaBI	GATNNNNATC	3 cut(s)	210, 762, 1032
BsaHI	GRCGYC	1 cut(s)	549
BsaJI	CCNNGG	6 cut(s)	15, 510, 693, 1196, 1249, 1953
BsaWI	WCCGGW	2 cut(s)	445, 1747
Bsc4I	CCNNNNNNNGG	8 cut(s)	788, 1043, 1175, 1176, 1202, 1341, 1454, 1741
Bse118I	RCCGGY	3 cut(s)	1462, 1747, 2014
Bse1I	ACTGG	9 cut(s)	90, 335, 441, 473, 819, 1211, 1538, 2034, 2183
Bse3DI	GCAATG	1 cut(s)	915
Bse8I	GATNNNNATC	3 cut(s)	210, 762, 1032
BseBI	CCWGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
BseDI	CCNNGG	6 cut(s)	15, 510, 693, 1196, 1249, 1953
BseJI	GATNNNNATC	3 cut(s)	210, 762, 1032
BseLI	CCNNNNNNNGG	8 cut(s)	788, 1043, 1175, 1176, 1202, 1341, 1454, 1741
BseMI	GCAATG	1 cut(s)	915
BseMII	CTCAG	4 cut(s)	38, 633, 942, 1839
BseNI	ACTGG	9 cut(s)	90, 335, 441, 473, 819, 1211, 1538, 2034, 2183
BseRI	GAGGAG	1 cut(s)	2210
BseSI	GKGCMC	1 cut(s)	796
BseXI	GCAGC	6 cut(s)	565, 650, 928, 1684, 2187, 2229
BshFI	GGCC	6 cut(s)	486, 1206, 1254, 1375, 1557, 1827
BshNI	GGYRCC	1 cut(s)	548
BshTI	ACCGGT	1 cut(s)	1747
BsiHKAI	GWGCWC	3 cut(s)	796, 1794, 2076
BsiHKCI	CYCGRG	1 cut(s)	2075
BsiSI	CCGG	4 cut(s)	446, 1463, 1748, 2015
BslFI	GGGAC	3 cut(s)	301, 355, 2044
BslI	CCNNNNNNNGG	8 cut(s)	788, 1043, 1175, 1176, 1202, 1341, 1454, 1741
BsmAI	GTCTC	1 cut(s)	902
BsmFI	GGGAC	3 cut(s)	301, 355, 2044
BsnI	GGCC	6 cut(s)	486, 1206, 1254, 1375, 1557, 1827
BsoBI	CYCGRG	1 cut(s)	2075
Bsp1286I	GDGCHC	3 cut(s)	796, 1794, 2076
Bsp1407I	TGTACA	1 cut(s)	259
Bsp19I	CCATGG	2 cut(s)	1196, 1953
BspANI	GGCC	6 cut(s)	486, 1206, 1254, 1375, 1557, 1827
BspCNI	CTCAG	4 cut(s)	39, 634, 941, 1840
BspLI	GGNNCC	9 cut(s)	317, 550, 775, 1207, 1746, 1860, 2032, 2184, 2301
BspMAI	CTGCAG	2 cut(s)	640, 2205
BspMI	ACCTGC	2 cut(s)	2008, 2086
BspPI	GGATC	8 cut(s)	96, 768, 781, 811, 1582, 2177, 2190, 2292
BspT107I	GGYRCC	1 cut(s)	548
BsrBI	CCGCTC	1 cut(s)	546
BsrDI	GCAATG	1 cut(s)	915
BsrFI	RCCGGY	3 cut(s)	1462, 1747, 2014
BsrGI	TGTACA	1 cut(s)	259
BsrI	ACTGG	9 cut(s)	90, 335, 441, 473, 819, 1211, 1538, 2034, 2183
BssAI	RCCGGY	3 cut(s)	1462, 1747, 2014
BssECI	CCNNGG	6 cut(s)	15, 510, 693, 1196, 1249, 1953
BssNI	GRCGYC	1 cut(s)	549
BssT1I	CCWWGG	4 cut(s)	15, 693, 1196, 1953
Bst2UI	CCWGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
Bst4CI	ACNGT	8 cut(s)	733, 1361, 1832, 1870, 1885, 1906, 1921, 1942
Bst6I	CTCTTC	1 cut(s)	726
BstACI	GRCGYC	1 cut(s)	549
BstAUI	TGTACA	1 cut(s)	259
BstC8I	GCNNGC	3 cut(s)	539, 1464, 1817
BstDEI	CTNAG	7 cut(s)	47, 402, 642, 840, 928, 1260, 1848
BstDSI	CCRYGG	2 cut(s)	1196, 1953
BstH2I	RGCGCY	1 cut(s)	552
BstHHI	GCGC	2 cut(s)	551, 1353
BstMAI	GTCTC	1 cut(s)	902
BstMWI	GCNNNNNNNGC	6 cut(s)	359, 543, 575, 938, 2009, 2071
BstNI	CCWGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
BstPAI	GACNNNNGTC	2 cut(s)	17, 1086
BstSCI	CCNGG	7 cut(s)	510, 1249, 1513, 1590, 1774, 1785, 2139
BstSFI	CTRYAG	2 cut(s)	636, 2201
BstSLI	GKGCMC	1 cut(s)	796
BstV1I	GCAGC	6 cut(s)	565, 650, 928, 1684, 2187, 2229
BstV2I	GAAGAC	1 cut(s)	851
BstX2I	RGATCY	6 cut(s)	88, 117, 773, 2158, 2182, 2284
BstXI	CCANNNNNNTGG	3 cut(s)	700, 985, 1565
BstYI	RGATCY	6 cut(s)	88, 117, 773, 2158, 2182, 2284
BsuI	GTATCC	3 cut(s)	1887, 1923, 1959
BsuRI	GGCC	6 cut(s)	486, 1206, 1254, 1375, 1557, 1827
BtgI	CCRYGG	2 cut(s)	1196, 1953
BtgZI	GCGATG	2 cut(s)	998, 2096
BtsIMutI	CAGTG	9 cut(s)	44, 362, 826, 1019, 1531, 1711, 1837, 1881, 1917
BveI	ACCTGC	2 cut(s)	2008, 2086
Cac8I	GCNNGC	3 cut(s)	539, 1464, 1817
CaiI	CAGNNNCTG	2 cut(s)	581, 1700
CfoI	GCGC	2 cut(s)	551, 1353
Cfr10I	RCCGGY	3 cut(s)	1462, 1747, 2014
Cfr13I	GGNCC	7 cut(s)	315, 326, 484, 1046, 1205, 1859, 2031
CsiI	ACCWGGT	1 cut(s)	1513
Csp6I	GTAC	5 cut(s)	166, 260, 338, 493, 1305
CspAI	ACCGGT	1 cut(s)	1747
CspCI	CAANNNNNGTGG	2 cut(s)	274, 309
CviAII	CATG	7 cut(s)	97, 218, 725, 1197, 1781, 1954, 2062
CviQI	GTAC	5 cut(s)	166, 260, 338, 493, 1305
DdeI	CTNAG	7 cut(s)	47, 402, 642, 840, 928, 1260, 1848
DinI	GGCGCC	1 cut(s)	550
EaeI	YGGCCR	2 cut(s)	1555, 1825
Eam1104I	CTCTTC	1 cut(s)	726
EarI	CTCTTC	1 cut(s)	726
EciI	GGCGGA	2 cut(s)	128, 1360
Ecl136II	GAGCTC	2 cut(s)	1792, 2074
Eco130I	CCWWGG	4 cut(s)	15, 693, 1196, 1953
Eco24I	GRGCYC	2 cut(s)	1794, 2076
Eco32I	GATATC	1 cut(s)	1963
Eco47I	GGWCC	5 cut(s)	315, 326, 1046, 1859, 2031
Eco53kI	GAGCTC	2 cut(s)	1792, 2074
Eco57I	CTGAAG	4 cut(s)	386, 620, 2046, 2087
Eco88I	CYCGRG	1 cut(s)	2075
EcoICRI	GAGCTC	2 cut(s)	1792, 2074
EcoO109I	RGGNCCY	2 cut(s)	315, 1859
EcoRII	CCWGG	7 cut(s)	510, 1249, 1513, 1590, 1774, 1785, 2139
EcoRV	GATATC	1 cut(s)	1963
EcoT14I	CCWWGG	4 cut(s)	15, 693, 1196, 1953
EcoT38I	GRGCYC	2 cut(s)	1794, 2076
EgeI	GGCGCC	1 cut(s)	550
EheI	GGCGCC	1 cut(s)	550
ErhI	CCWWGG	4 cut(s)	15, 693, 1196, 1953
FaeI	CATG	7 cut(s)	100, 221, 728, 1200, 1784, 1957, 2065
FalI	AAGNNNNNCTT	2 cut(s)	180, 212
FaqI	GGGAC	3 cut(s)	301, 355, 2044
FatI	CATG	7 cut(s)	96, 217, 724, 1196, 1780, 1953, 2061
FbaI	TGATCA	1 cut(s)	2289
FblI	GTMKAC	1 cut(s)	11
Fnu4HI	GCNGC	9 cut(s)	360, 547, 579, 639, 942, 1698, 2201, 2243, 2303
FriOI	GRGCYC	2 cut(s)	1794, 2076
Fsp4HI	GCNGC	9 cut(s)	360, 547, 579, 639, 942, 1698, 2201, 2243, 2303
FspBI	CTAG	1 cut(s)	63
FspI	TGCGCA	1 cut(s)	1352
GlaI	GCGC	2 cut(s)	550, 1352
GluI	GCNGC	9 cut(s)	360, 547, 579, 639, 942, 1698, 2201, 2243, 2303
GsuI	CTGGAG	5 cut(s)	318, 546, 1555, 1700, 2162
HaeII	RGCGCY	1 cut(s)	552
HaeIII	GGCC	6 cut(s)	486, 1206, 1254, 1375, 1557, 1827
HapII	CCGG	4 cut(s)	446, 1463, 1748, 2015
HhaI	GCGC	2 cut(s)	551, 1353
Hin1I	GRCGYC	1 cut(s)	549
Hin1II	CATG	7 cut(s)	100, 221, 728, 1200, 1784, 1957, 2065
Hin6I	GCGC	2 cut(s)	549, 1351
HinP1I	GCGC	2 cut(s)	549, 1351
HincII	GTYRAC	3 cut(s)	12, 466, 1571
HindII	GTYRAC	3 cut(s)	12, 466, 1571
HindIII	AAGCTT	1 cut(s)	1262
HpaII	CCGG	4 cut(s)	446, 1463, 1748, 2015
HphI	GGTGA	8 cut(s)	194, 221, 617, 1418, 1503, 1762, 1986, 2260
Hpy166II	GTNNAC	6 cut(s)	12, 329, 466, 794, 1571, 1684
Hpy188I	TCNGA	9 cut(s)	519, 600, 1092, 1426, 1587, 1641, 2026, 2176, 2289
Hpy188III	TCNNGA	9 cut(s)	92, 121, 247, 389, 413, 503, 771, 1228, 1435
Hpy8I	GTNNAC	6 cut(s)	12, 329, 466, 794, 1571, 1684
Hpy99I	CGWCG	1 cut(s)	13
HpyCH4III	ACNGT	8 cut(s)	733, 1361, 1832, 1870, 1885, 1906, 1921, 1942
HpyCH4IV	ACGT	4 cut(s)	164, 1128, 1573, 1686
HpyCH4V	TGCA	9 cut(s)	217, 434, 638, 728, 794, 920, 1103, 2012, 2203
HpyF10VI	GCNNNNNNNGC	6 cut(s)	359, 543, 575, 938, 2009, 2071
HpyF3I	CTNAG	7 cut(s)	47, 402, 642, 840, 928, 1260, 1848
HpySE526I	ACGT	4 cut(s)	164, 1128, 1573, 1686
Hsp92I	GRCGYC	1 cut(s)	549
Hsp92II	CATG	7 cut(s)	100, 221, 728, 1200, 1784, 1957, 2065
HspAI	GCGC	2 cut(s)	549, 1351
KasI	GGCGCC	1 cut(s)	548
KroI	GCCGGC	1 cut(s)	1462
KroNI	GCCGGC	1 cut(s)	1464
Ksp22I	TGATCA	1 cut(s)	2289
Lsp1109I	GCAGC	6 cut(s)	565, 650, 928, 1684, 2187, 2229
LweI	GCATC	8 cut(s)	136, 340, 443, 496, 1338, 1588, 2027, 2274
MabI	ACCWGGT	1 cut(s)	1513
MaeI	CTAG	1 cut(s)	63
MaeII	ACGT	4 cut(s)	164, 1128, 1573, 1686
MaeIII	GTNAC	5 cut(s)	190, 688, 1406, 1517, 1706
MbiI	CCGCTC	1 cut(s)	546
MboII	GAAGA	7 cut(s)	188, 262, 713, 851, 2066, 2168, 2263
MfeI	CAATTG	1 cut(s)	1038
MflI	RGATCY	6 cut(s)	88, 117, 773, 2158, 2182, 2284
MhlI	GDGCHC	3 cut(s)	796, 1794, 2076
MlsI	TGGCCA	2 cut(s)	1557, 1827
MluNI	TGGCCA	2 cut(s)	1557, 1827
Mly113I	GGCGCC	1 cut(s)	549
MlyI	GAGTC	5 cut(s)	133, 187, 845, 904, 920
MmeI	TCCRAC	2 cut(s)	82, 1024
Mox20I	TGGCCA	2 cut(s)	1557, 1827
MroNI	GCCGGC	1 cut(s)	1462
MscI	TGGCCA	2 cut(s)	1557, 1827
MseI	TTAA	5 cut(s)	267, 629, 1238, 1310, 2091
MslI	CAYNNNNRTG	4 cut(s)	158, 819, 1005, 1393
Msp20I	TGGCCA	2 cut(s)	1557, 1827
MspA1I	CMGCKG	5 cut(s)	524, 578, 641, 800, 1697
MspI	CCGG	4 cut(s)	446, 1463, 1748, 2015
MspR9I	CCNGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
MunI	CAATTG	1 cut(s)	1038
MvaI	CCWGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
MwoI	GCNNNNNNNGC	6 cut(s)	359, 543, 575, 938, 2009, 2071
NaeI	GCCGGC	1 cut(s)	1464
NarI	GGCGCC	1 cut(s)	549
NcoI	CCATGG	2 cut(s)	1196, 1953
NgoMIV	GCCGGC	1 cut(s)	1462
NlaIII	CATG	7 cut(s)	100, 221, 728, 1200, 1784, 1957, 2065
NlaIV	GGNNCC	9 cut(s)	317, 550, 775, 1207, 1746, 1860, 2032, 2184, 2301
NmeAIII	GCCGAG	1 cut(s)	928
NmuCI	GTSAC	5 cut(s)	190, 688, 1406, 1517, 1706
NsbI	TGCGCA	1 cut(s)	1352
OliI	CACNNNNGTG	3 cut(s)	819, 1005, 1393
PaeR7I	CTCGAG	1 cut(s)	2075
PaqCI	CACCTGC	1 cut(s)	2008
PcsI	WCGNNNNNNNCGW	2 cut(s)	1485, 1943
PdiI	GCCGGC	1 cut(s)	1464
PflFI	GACNNNGTC	1 cut(s)	1942
PflMI	CCANNNNNTGG	2 cut(s)	1043, 1341
PinAI	ACCGGT	1 cut(s)	1747
PkrI	GCNGC	9 cut(s)	361, 548, 580, 640, 943, 1699, 2202, 2244, 2304
PleI	GAGTC	5 cut(s)	132, 187, 844, 904, 920
PluTI	GGCGCC	1 cut(s)	552
PpsI	GAGTC	5 cut(s)	132, 187, 844, 904, 920
PpuMI	RGGWCCY	2 cut(s)	315, 1859
PshAI	GACNNNNGTC	2 cut(s)	17, 1086
PshBI	ATTAAT	1 cut(s)	1310
Psp124BI	GAGCTC	2 cut(s)	1794, 2076
Psp1406I	AACGTT	1 cut(s)	1686
Psp5II	RGGWCCY	2 cut(s)	315, 1859
Psp6I	CCWGG	7 cut(s)	510, 1249, 1513, 1590, 1774, 1785, 2139
PspGI	CCWGG	7 cut(s)	510, 1249, 1513, 1590, 1774, 1785, 2139
PspN4I	GGNNCC	9 cut(s)	317, 550, 775, 1207, 1746, 1860, 2032, 2184, 2301
PspPI	GGNCC	7 cut(s)	315, 326, 484, 1046, 1205, 1859, 2031
PspPPI	RGGWCCY	2 cut(s)	315, 1859
PspXI	VCTCGAGB	1 cut(s)	2075
PstI	CTGCAG	2 cut(s)	640, 2205
PstNI	CAGNNNCTG	2 cut(s)	581, 1700
PsuI	RGATCY	6 cut(s)	88, 117, 773, 2158, 2182, 2284
PsyI	GACNNNGTC	1 cut(s)	1942
PvuII	CAGCTG	4 cut(s)	578, 641, 800, 1697
RsaI	GTAC	5 cut(s)	167, 261, 339, 494, 1306
RsaNI	GTAC	5 cut(s)	166, 260, 338, 493, 1305
RseI	CAYNNNNRTG	4 cut(s)	158, 819, 1005, 1393
SacI	GAGCTC	2 cut(s)	1794, 2076
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	5 cut(s)	267, 629, 1238, 1310, 2091
SatI	GCNGC	9 cut(s)	360, 547, 579, 639, 942, 1698, 2201, 2243, 2303
Sau96I	GGNCC	7 cut(s)	315, 326, 484, 1046, 1205, 1859, 2031
SchI	GAGTC	5 cut(s)	133, 187, 845, 904, 920
ScrFI	CCNGG	7 cut(s)	512, 1251, 1515, 1592, 1776, 1787, 2141
SduI	GDGCHC	3 cut(s)	796, 1794, 2076
SexAI	ACCWGGT	1 cut(s)	1513
SfaNI	GCATC	8 cut(s)	136, 340, 443, 496, 1338, 1588, 2027, 2274
SfcI	CTRYAG	2 cut(s)	636, 2201
SfoI	GGCGCC	1 cut(s)	550
Sfr274I	CTCGAG	1 cut(s)	2075
SinI	GGWCC	5 cut(s)	315, 326, 1046, 1859, 2031
SlaI	CTCGAG	1 cut(s)	2075
SmiMI	CAYNNNNRTG	4 cut(s)	158, 819, 1005, 1393
SmlI	CTYRAG	7 cut(s)	121, 321, 1228, 1377, 1739, 2075, 2192
SmoI	CTYRAG	7 cut(s)	121, 321, 1228, 1377, 1739, 2075, 2192
SspDI	GGCGCC	1 cut(s)	548
SspI	AATATT	1 cut(s)	868
SspMI	CTAG	1 cut(s)	63
SstI	GAGCTC	2 cut(s)	1794, 2076
StyD4I	CCNGG	7 cut(s)	510, 1249, 1513, 1590, 1774, 1785, 2139
StyI	CCWWGG	4 cut(s)	15, 693, 1196, 1953
TaaI	ACNGT	8 cut(s)	733, 1361, 1832, 1870, 1885, 1906, 1921, 1942
TaiI	ACGT	4 cut(s)	167, 1131, 1576, 1689
TaqI	TCGA	7 cut(s)	11, 1051, 1434, 1479, 1937, 2076, 2154
TatI	WGTACW	1 cut(s)	259
TauI	GCSGC	3 cut(s)	362, 549, 2305
Tru1I	TTAA	5 cut(s)	267, 629, 1238, 1310, 2091
Tru9I	TTAA	5 cut(s)	267, 629, 1238, 1310, 2091
TscAI	CASTG	9 cut(s)	51, 369, 826, 1019, 1538, 1711, 1837, 1888, 1924
TseFI	GTSAC	5 cut(s)	190, 688, 1406, 1517, 1706
TseI	GCWGC	6 cut(s)	578, 638, 941, 1697, 2200, 2242
Tsp45I	GTSAC	5 cut(s)	190, 688, 1406, 1517, 1706
TspDTI	ATGAA	9 cut(s)	189, 201, 713, 1259, 1488, 1605, 1683, 1983, 2246
TspGWI	ACGGA	1 cut(s)	689
TspRI	CASTG	9 cut(s)	51, 369, 826, 1019, 1538, 1711, 1837, 1888, 1924
Tth111I	GACNNNGTC	1 cut(s)	1942
Van91I	CCANNNNNTGG	2 cut(s)	1043, 1341
VneI	GTGCAC	1 cut(s)	792
VpaK11BI	GGWCC	5 cut(s)	315, 326, 1046, 1859, 2031
VspI	ATTAAT	1 cut(s)	1310
XapI	RAATTY	4 cut(s)	242, 343, 392, 1648
XhoI	CTCGAG	1 cut(s)	2075
XmiI	GTMKAC	1 cut(s)	11
XspI	CTAG	1 cut(s)	63

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.