Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004577

Physical Location & Seq

Genomic Coordinates Reverse (-)

12878667 .. 12883805

Gene Structure 5139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G25090.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGCAGAGAGTGAGCTTTGAAGTAAAGGACACAGAGGCGGAGAAGAGCAGCAGCGAGATACTGAGCGGATCTTTGCCGTCGACCTACCGAAATCCGGCGATGGAAAACGTTGGAAACGCGGTGGATGATGGATCGAGCGTGAAGAACAATCCGAAACTTGATATGCAGAAACAGAACGGTTTGGTGAAGTGGTTCAAGAAGTGCTTGACAATGGTATCTGGAGAGAGTAAGGCACCTCGATTGGACCGGTCGAAGTCAACGGCCGGTCAGGCCTTGAAAGGGCTCAAGATCATCAGTAAGACCGACGGTAACGCTGCCTGGACCGTCGTGGAGAAGCGGTACTTGAAGATCACGGCCAATACTGATGGATTGCTGCTTCGGTCGAAATTCGGTGAATGCATAGGGATGAACTCAAAAGAATTTGCCTTGGAATTGTTTGACGCCTTAGCTAGAAAAAGTCACTTGAAAGGGGATGTGATTACTGAGACCGAGTTGAAGAAATTTTGGGAACAAATAAATGATAAAAGCTTTGATTCAAGGCTTATCACGTTCTTTGACTTGATGGATAAAGACTCGGATGGTAGACTTACGGAAGACGAAGTTAGAGAGATCATCAAGCTTAGTTCTTCTGCCAATCATCTGTCATGCATCCAAAACAAGGCAGATGAATATGCAGCAATGATAATGGAAGAGCTTGACCCTGATCATATGGGATACATCATGATGGAGAGTCTAAAGAAATTGCTTCTGCAAGCGGAAACAAAATCTGTAAGCACAGATATTAATAGTGAAGAAAGAAAGGAGCTGAGCGACATGCTAACTGAGAGTCTCAAGCCTACACGTGACCCTAACCATTTGAGGAGATGGTATTGTCAACTAAGATTCTTTGTATTGGATAGTTGGCAAAGAGTTTGGGTGATAGCGTTATGGCTCACGATTATGGCCATCCTCTTCGCGTACAAGTATATTCAATACAAGAATAGAGCAGTGTATGAAGTGTTGGGGCCTTGTGTGTGCTTGGCTAAAGGTGCAGCAGAGACGCTGAAGCTAAACATGGCCCTAATTCTGTTACCTGTTTGCAGAAATACCATCACATGGCTTAGAAATAAGACTAGGTTGGGTGTTTTTGTTCCTTTTGATGACAACCTCAATTTTCACAAGGTTATAGCGGTGGGAATTGCGATAGGAGTAGCCATACACTCTGTGTCCCACTTGGCGTGTGATTTTCCACTGCTAATCGCGGCAACTCCAGCGGAATACATGCCTCTCGGAAAATTCTTCGGAGAGGAGCAACCAAAGAGATACTTGCATTTTGTGAAGTCAACAGAAGGAATAACAGGGCTTGTAATGGTTTTCTTGATGGTTATTGCTTTTACACTGGCTATGCCTTGGTTTAGACGGGGGAAGCTAGAGAAAAAGCTACCAGGGCCACTAAAGAAACTTGCGAGCTTCAATGCCTTCTGGTACACTCACCATTTGTTCGTTATAGTCTACATTCTCCTTGTCCTTCACGGATACTACATATATCTCAACAAGGAATGGTACAAGAAAACGACGTGGATGTACTTGGCAGTACCAGTAGCTCTTTATGCATACGAGAGATTGATACGAGCATTCAGGTCCAGCATCAGGACAGTAAAAGTCCTTAAGATGGCAGCTTATCCTGGAAAAGTATTGACTTTGCAGATGTCAAAGCCTACAAACTTCAAATACATGAGCGGCCAATACATGTTTGTAAATTGTCCAGCAGTTTCACCGTTTGAGTGGCATCCATTTTCAATAACTTCTACACCACAAGACGACTATCTGAGCGTTCATATAAAAGCATTGGGAGATTGGACAGAGGCTATCCAAGGAGTTTTCTCAGAGGTGTCTAAGCCACCTCCGGTCGGAGACATGTTGAATGGTGCAAATAGTCCCCGTTTCCCCAAAATTATGATTGATGGTCCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTCCTGCTGATAGGTCTTGGCATTGGAGCCACCCCGATGATCAGCATTATCAAGGACATTATTAACAATACGGAGACCAAGGAACAACTCAGCCAAATGGAGAAGGGATCGCCACAAGAGCAACAAGGTAATAAAGAAACTTTCAAGACTCGAAGGGCTTACTTCTACTGGGTAACAAAGGAGCAGGGCACATTTGATTGGTTCAAGAACATCATGAACGAGATCGCAGAACGGGACAAAAGTAAAGTCATAGAACTACACAATCATTGCACTAGTGTCTACGAAGAAGGAGACGTTCGTTCCGCGCTCATACGGATGCTTCAGTCTCTTAATTATGCCAAGAATGGTTTAGACATTGTTGCTGGGACAAGGGTCATGTCCCATTTCGCCCGACCTAATTGGAAAAACGTCTACAAACAGATAGCCATGGATCACCCTGGCGCTAATGTTGGAGTGTTCTATTGTGGAGCACCGGTATTGACGAAGGAGTTAAGGCAATTAGCTTTGGAATTCACACACAAGACCAGTACTAGATTCTCTTTCCACAAAGAGAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005840 GO:0005886 GO:0005887 GO:0006091 GO:0007275 GO:0007584 GO:0008150 GO:0008152 GO:0009060 GO:0009605 GO:0009653 GO:0009888 GO:0009987 GO:0009991 GO:0010015 GO:0010033 GO:0010053 GO:0010243 GO:0014070 GO:0014074 GO:0015980 GO:0016020 GO:0016021 GO:0016174 GO:0016491 GO:0016651 GO:0022622 GO:0022626 GO:0030154 GO:0031224 GO:0031226 GO:0031667 GO:0032501 GO:0032502 GO:0032991 GO:0033198 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044424 GO:0044425 GO:0044444 GO:0044445 GO:0044459 GO:0044464 GO:0045333 GO:0046683 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050664 GO:0050896 GO:0055114 GO:0071944 GO:0090558 GO:0090627 GO:0099402 GO:1901698 GO:1901700 GO:1905392 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

849

Amino Acids

96.86

Weight (kDa)

9.1

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NADPH_Ox	PF08414	80 - 179	9.5e-36	Respiratory burst NADPH oxidase
Ferric_reduct	PF01794	339 - 490	1.1e-12	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	533 - 643	1.3e-33	FAD-binding domain
NAD_binding_6	PF08030	649 - 819	9.5e-50	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25090 AT4G25090 AT5G07390 AT5G07390 AT5G51060
fragaria_vesca	FvH4_5g10010 FvH4_5g10010 FvH4_5g10010 FvH4_5g10010
malus_domestica	MD06G1128500.v1.1
prunus_persica	Prupe.5G138300_v2.0.a1
pyrus_communis	pycom06g11870
rosa_chinensis	RchiOBHm_Chr7g0188251 RchiOBHm_Chr7g0202531
rosa_laevigata	RLG00000003591 RLG00000004714
rosa_multiflora	Rmu_sc0008750.1_g000012 Rmu_sc0029377.1_g000002
rosa_roxburghii	Rroxscaffold_3G00254540 Rroxscaffold_3G00266570
rosa_rugosa	Rorug06G0489400
rosa_samantha	Rh7AG093800 Rh7AG198600 Rh7BG095200 Rh7BG199900 Rh7CG095600 Rh7CG210100 Rh7DG095800 Rh7DG205500
rosa_wichuraiana	Rw7G008080 Rw7G017430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	232
AccB7I	CCANNNNNTGG	1 cut(s)	1095
AccBSI	CCGCTC	2 cut(s)	66, 1719
AccI	GTMKAC	5 cut(s)	80, 583, 1491, 2268, 2400
AccII	CGCG	4 cut(s)	119, 956, 1241, 2294
AclI	AACGTT	1 cut(s)	108
AclWI	GGATC	4 cut(s)	76, 139, 2104, 2427
AcoI	YGGCCR	4 cut(s)	261, 354, 942, 1720
AcsI	RAATTY	5 cut(s)	386, 419, 500, 1274, 2498
AcuI	CTGAAG	2 cut(s)	1064, 2294
AcvI	CACGTG	1 cut(s)	842
AcyI	GRCGYC	1 cut(s)	441
AdeI	CACNNNGTG	1 cut(s)	1204
AfaI	GTAC	9 cut(s)	341, 959, 1466, 1544, 1565, 1575, 1952, 1982, 2518
AfiI	CCNNNNNNNGG	7 cut(s)	94, 279, 658, 1095, 1629, 1651, 1889
AflII	CTTAAG	1 cut(s)	1646
AflIII	ACRYGT	3 cut(s)	839, 1728, 1896
AgeI	ACCGGT	2 cut(s)	246, 2461
AhlI	ACTAGT	1 cut(s)	2261
AjiI	CACGTC	1 cut(s)	1557
AjnI	CCWGG	4 cut(s)	317, 1423, 1663, 2425
Alw21I	GWGCWC	1 cut(s)	2461
Alw26I	GTCTC	7 cut(s)	479, 833, 1031, 1887, 2057, 2274, 2319
AlwI	GGATC	4 cut(s)	76, 139, 2104, 2427
AoxI	GGCC	8 cut(s)	261, 270, 354, 942, 1004, 1056, 1427, 1720
ApeKI	GCWGC	7 cut(s)	48, 51, 314, 373, 674, 1031, 1655
ApoI	RAATTY	5 cut(s)	386, 419, 500, 1274, 2498
ArsI	GACNNNNNNTTYG	2 cut(s)	2220, 2252
AseI	ATTAAT	1 cut(s)	783
AsiGI	ACCGGT	2 cut(s)	246, 2461
Asp700I	GAANNNNTTC	1 cut(s)	191
AspLEI	GCGC	3 cut(s)	1958, 2296, 2432
AspS9I	GGNCC	8 cut(s)	244, 321, 1004, 1057, 1427, 1620, 1946, 1990
AsuHPI	GGTGA	6 cut(s)	196, 404, 928, 1463, 1746, 2414
AvaII	GGWCC	5 cut(s)	244, 321, 1620, 1946, 1990
BaeGI	GKGCMC	1 cut(s)	2180
BaeI	ACNNNNGTAYC	2 cut(s)	198, 231
BalI	TGGCCA	1 cut(s)	944
BanI	GGYRCC	1 cut(s)	232
BanII	GRGCYC	1 cut(s)	285
BbrPI	CACGTG	1 cut(s)	842
BbsI	GAAGAC	1 cut(s)	600
Bbv12I	GWGCWC	1 cut(s)	2461
BbvI	GCAGC	7 cut(s)	60, 63, 301, 360, 686, 1043, 1667
BceAI	ACGGC	4 cut(s)	61, 276, 369, 1969
BciT130I	CCWGG	4 cut(s)	319, 1425, 1665, 2427
BciVI	GTATCC	2 cut(s)	707, 1508
BclI	TGATCA	2 cut(s)	703, 2028
BcoDI	GTCTC	7 cut(s)	479, 833, 1031, 1887, 2057, 2274, 2319
BcuI	ACTAGT	1 cut(s)	2261
BfaI	CTAG	5 cut(s)	450, 1113, 1409, 2262, 2520
BfoI	RGCGCY	1 cut(s)	2433
BfrI	CTTAAG	1 cut(s)	1646
BfuI	GTATCC	2 cut(s)	707, 1508
BglI	GCCNNNNNGGC	1 cut(s)	269
BisI	GCNGC	9 cut(s)	49, 52, 315, 374, 675, 1032, 1242, 1656, 1720
BlpI	GCTNAGC	1 cut(s)	806
BlsI	GCNGC	9 cut(s)	50, 53, 316, 375, 676, 1033, 1243, 1657, 1721
BmcAI	AGTACT	1 cut(s)	2518
Bme1390I	CCNGG	4 cut(s)	319, 1425, 1665, 2427
Bme18I	GGWCC	5 cut(s)	244, 321, 1620, 1946, 1990
BmgBI	CACGTC	1 cut(s)	1557
BmgT120I	GGNCC	8 cut(s)	244, 321, 1004, 1057, 1427, 1620, 1946, 1990
BmiI	GGNNCC	3 cut(s)	234, 1005, 2017
BmrFI	CCNGG	4 cut(s)	319, 1425, 1665, 2427
BmrI	ACTGGG	1 cut(s)	2167
BmsI	GCATC	4 cut(s)	657, 1635, 1777, 2295
BmuI	ACTGGG	1 cut(s)	2167
BoxI	GACNNNNGTC	1 cut(s)	2360
BpiI	GAAGAC	1 cut(s)	600
BpmI	CTGGAG	2 cut(s)	240, 1233
Bpu10I	CCTNAGC	1 cut(s)	445
Bpu1102I	GCTNAGC	1 cut(s)	806
BpuEI	CTTGAG	3 cut(s)	269, 815, 1950
BsaAI	YACGTR	1 cut(s)	842
BsaHI	GRCGYC	1 cut(s)	441
BsaI	GGTCTC	2 cut(s)	479, 2057
BsaJI	CCNNGG	7 cut(s)	426, 1388, 1424, 1852, 2067, 2415, 2425
BsaWI	WCCGGW	3 cut(s)	246, 1885, 2461
BsaXI	ACNNNNNCTCC	4 cut(s)	323, 353, 2448, 2478
Bsc4I	CCNNNNNNNGG	7 cut(s)	94, 279, 658, 1095, 1629, 1651, 1889
Bse118I	RCCGGY	3 cut(s)	246, 263, 2461
Bse1I	ACTGG	4 cut(s)	1383, 1577, 2162, 2514
Bse3DI	GCAATG	2 cut(s)	684, 2254
BseBI	CCWGG	4 cut(s)	319, 1425, 1665, 2427
BseDI	CCNNGG	7 cut(s)	426, 1388, 1424, 1852, 2067, 2415, 2425
BseGI	GGATG	9 cut(s)	130, 411, 478, 583, 648, 945, 1566, 1768, 2310
BseLI	CCNNNNNNNGG	7 cut(s)	94, 279, 658, 1095, 1629, 1651, 1889
BseMI	GCAATG	2 cut(s)	684, 2254
BseMII	CTCAG	7 cut(s)	53, 474, 797, 813, 1799, 1878, 2092
BseNI	ACTGG	4 cut(s)	1383, 1577, 2162, 2514
BseRI	GAGGAG	2 cut(s)	874, 1301
BseSI	GKGCMC	1 cut(s)	2180
BseX3I	CGGCCG	1 cut(s)	261
BseXI	GCAGC	7 cut(s)	60, 63, 301, 360, 686, 1043, 1667
BseYI	CCCAGC	1 cut(s)	2351
BsgI	GTGCAG	1 cut(s)	1050
Bsh1236I	CGCG	4 cut(s)	119, 956, 1241, 2294
Bsh1285I	CGRYCG	4 cut(s)	251, 264, 383, 1890
BshFI	GGCC	8 cut(s)	263, 272, 356, 944, 1006, 1058, 1429, 1722
BshNI	GGYRCC	1 cut(s)	232
BshTI	ACCGGT	2 cut(s)	246, 2461
BsiEI	CGRYCG	4 cut(s)	251, 264, 383, 1890
BsiHKAI	GWGCWC	1 cut(s)	2461
BsiSI	CCGG	5 cut(s)	95, 247, 264, 1886, 2462
BsiWI	CGTACG	1 cut(s)	1950
BslFI	GGGAC	5 cut(s)	1192, 1902, 2237, 2353, 2368
BslI	CCNNNNNNNGG	7 cut(s)	94, 279, 658, 1095, 1629, 1651, 1889
BsmAI	GTCTC	7 cut(s)	479, 833, 1031, 1887, 2057, 2274, 2319
BsmBI	CGTCTC	2 cut(s)	1031, 2274
BsmFI	GGGAC	5 cut(s)	1192, 1902, 2237, 2353, 2368
BsmI	GAATGC	2 cut(s)	401, 1613
BsnI	GGCC	8 cut(s)	263, 272, 356, 944, 1006, 1058, 1429, 1722
Bso31I	GGTCTC	2 cut(s)	479, 2057
Bsp1286I	GDGCHC	3 cut(s)	285, 2180, 2461
Bsp1720I	GCTNAGC	1 cut(s)	806
Bsp19I	CCATGG	1 cut(s)	2415
BspANI	GGCC	8 cut(s)	263, 272, 356, 944, 1006, 1058, 1429, 1722
BspCNI	CTCAG	7 cut(s)	54, 475, 798, 814, 1800, 1877, 2091
BspFNI	CGCG	4 cut(s)	119, 956, 1241, 2294
BspHI	TCATGA	2 cut(s)	720, 2202
BspLI	GGNNCC	3 cut(s)	234, 1005, 2017
BspPI	GGATC	4 cut(s)	76, 139, 2104, 2427
BspQI	GCTCTTC	2 cut(s)	38, 684
BspT107I	GGYRCC	1 cut(s)	232
BspTI	CTTAAG	1 cut(s)	1646
BspTNI	GGTCTC	2 cut(s)	479, 2057
BsrBI	CCGCTC	2 cut(s)	66, 1719
BsrDI	GCAATG	2 cut(s)	684, 2254
BsrFI	RCCGGY	3 cut(s)	246, 263, 2461
BsrI	ACTGG	4 cut(s)	1383, 1577, 2162, 2514
BssAI	RCCGGY	3 cut(s)	246, 263, 2461
BssECI	CCNNGG	7 cut(s)	426, 1388, 1424, 1852, 2067, 2415, 2425
BssNI	GRCGYC	1 cut(s)	441
BssT1I	CCWWGG	5 cut(s)	426, 1388, 1852, 2067, 2415
Bst2UI	CCWGG	4 cut(s)	319, 1425, 1665, 2427
Bst4CI	ACNGT	5 cut(s)	179, 308, 325, 1636, 1758
Bst6I	CTCTTC	3 cut(s)	38, 684, 956
BstACI	GRCGYC	1 cut(s)	441
BstAFI	CTTAAG	1 cut(s)	1646
BstBAI	YACGTR	1 cut(s)	842
BstC8I	GCNNGC	2 cut(s)	753, 1447
BstDSI	CCRYGG	1 cut(s)	2415
BstF5I	GGATG	9 cut(s)	130, 411, 478, 583, 648, 945, 1566, 1768, 2310
BstFNI	CGCG	4 cut(s)	119, 956, 1241, 2294
BstH2I	RGCGCY	1 cut(s)	2433
BstHHI	GCGC	3 cut(s)	1958, 2296, 2432
BstMAI	GTCTC	7 cut(s)	479, 833, 1031, 1887, 2057, 2274, 2319
BstMCI	CGRYCG	4 cut(s)	251, 264, 383, 1890
BstMWI	GCNNNNNNNGC	6 cut(s)	269, 1028, 1250, 1426, 1589, 2107
BstNI	CCWGG	4 cut(s)	319, 1425, 1665, 2427
BstNSI	RCATGY	4 cut(s)	817, 1264, 1732, 1900
BstPAI	GACNNNNGTC	1 cut(s)	2360
BstSCI	CCNGG	4 cut(s)	317, 1423, 1663, 2425
BstSLI	GKGCMC	1 cut(s)	2180
BstUI	CGCG	4 cut(s)	119, 956, 1241, 2294
BstV1I	GCAGC	7 cut(s)	60, 63, 301, 360, 686, 1043, 1667
BstV2I	GAAGAC	1 cut(s)	600
BstX2I	RGATCY	1 cut(s)	68
BstYI	RGATCY	1 cut(s)	68
BstZI	CGGCCG	1 cut(s)	261
BsuI	GTATCC	2 cut(s)	707, 1508
BsuRI	GGCC	8 cut(s)	263, 272, 356, 944, 1006, 1058, 1429, 1722
BtgI	CCRYGG	1 cut(s)	2415
BtgZI	GCGATG	1 cut(s)	113
BtrI	CACGTC	1 cut(s)	1557
BtsCI	GGATG	9 cut(s)	130, 411, 478, 583, 648, 945, 1566, 1768, 2310
BtsI	GCAGTG	2 cut(s)	993, 1229
BtsIMutI	CAGTG	3 cut(s)	993, 1229, 1376
Cac8I	GCNNGC	2 cut(s)	753, 1447
CciI	TCATGA	2 cut(s)	720, 2202
CfoI	GCGC	3 cut(s)	1958, 2296, 2432
Cfr10I	RCCGGY	3 cut(s)	246, 263, 2461
Cfr13I	GGNCC	8 cut(s)	244, 321, 1004, 1057, 1427, 1620, 1946, 1990
CseI	GACGC	2 cut(s)	449, 1048
Csp6I	GTAC	9 cut(s)	340, 958, 1465, 1543, 1564, 1574, 1951, 1981, 2517
CspAI	ACCGGT	2 cut(s)	246, 2461
CviQI	GTAC	9 cut(s)	340, 958, 1465, 1543, 1564, 1574, 1951, 1981, 2517
DraIII	CACNNNGTG	1 cut(s)	1204
EaeI	YGGCCR	4 cut(s)	261, 354, 942, 1720
EagI	CGGCCG	1 cut(s)	261
Eam1104I	CTCTTC	3 cut(s)	38, 684, 956
EarI	CTCTTC	3 cut(s)	38, 684, 956
EciI	GGCGGA	1 cut(s)	53
EclXI	CGGCCG	1 cut(s)	261
Eco130I	CCWWGG	5 cut(s)	426, 1388, 1852, 2067, 2415
Eco147I	AGGCCT	1 cut(s)	272
Eco24I	GRGCYC	1 cut(s)	285
Eco31I	GGTCTC	2 cut(s)	479, 2057
Eco47I	GGWCC	5 cut(s)	244, 321, 1620, 1946, 1990
Eco52I	CGGCCG	1 cut(s)	261
Eco57I	CTGAAG	2 cut(s)	1064, 2294
Eco72I	CACGTG	1 cut(s)	842
EcoO109I	RGGNCCY	1 cut(s)	1004
EcoRI	GAATTC	1 cut(s)	2498
EcoRII	CCWGG	4 cut(s)	317, 1423, 1663, 2425
EcoT14I	CCWWGG	5 cut(s)	426, 1388, 1852, 2067, 2415
EcoT22I	ATGCAT	3 cut(s)	401, 650, 1594
EcoT38I	GRGCYC	1 cut(s)	285
ErhI	CCWWGG	5 cut(s)	426, 1388, 1852, 2067, 2415
Esp3I	CGTCTC	2 cut(s)	1031, 2274
FalI	AAGNNNNNCTT	6 cut(s)	188, 220, 326, 358, 1289, 1321
FaqI	GGGAC	5 cut(s)	1192, 1902, 2237, 2353, 2368
FauNDI	CATATG	1 cut(s)	708
FbaI	TGATCA	2 cut(s)	703, 2028
FblI	GTMKAC	5 cut(s)	80, 583, 1491, 2268, 2400
Fnu4HI	GCNGC	9 cut(s)	49, 52, 315, 374, 675, 1032, 1242, 1656, 1720
FokI	GGATG	9 cut(s)	137, 418, 485, 590, 635, 932, 1573, 1755, 2317
FriOI	GRGCYC	1 cut(s)	285
Fsp4HI	GCNGC	9 cut(s)	49, 52, 315, 374, 675, 1032, 1242, 1656, 1720
FspBI	CTAG	5 cut(s)	450, 1113, 1409, 2262, 2520
GlaI	GCGC	3 cut(s)	1957, 2295, 2431
GluI	GCNGC	9 cut(s)	49, 52, 315, 374, 675, 1032, 1242, 1656, 1720
GsaI	CCCAGC	1 cut(s)	2355
GsuI	CTGGAG	2 cut(s)	240, 1233
HaeII	RGCGCY	1 cut(s)	2433
HaeIII	GGCC	8 cut(s)	263, 272, 356, 944, 1006, 1058, 1429, 1722
HapII	CCGG	5 cut(s)	95, 247, 264, 1886, 2462
HgaI	GACGC	2 cut(s)	449, 1048
HhaI	GCGC	3 cut(s)	1958, 2296, 2432
Hin1I	GRCGYC	1 cut(s)	441
Hin6I	GCGC	3 cut(s)	1956, 2294, 2430
HinP1I	GCGC	3 cut(s)	1956, 2294, 2430
HincII	GTYRAC	4 cut(s)	81, 258, 875, 1323
HindII	GTYRAC	4 cut(s)	81, 258, 875, 1323
HindIII	AAGCTT	2 cut(s)	526, 617
HinfI	GANTC	7 cut(s)	533, 572, 730, 826, 882, 2137, 2523
HpaII	CCGG	5 cut(s)	95, 247, 264, 1886, 2462
HphI	GGTGA	6 cut(s)	196, 404, 928, 1463, 1746, 2414
Hpy166II	GTNNAC	9 cut(s)	81, 258, 584, 875, 1323, 1467, 1492, 2269, 2401
Hpy188I	TCNGA	7 cut(s)	153, 577, 1271, 1283, 1809, 1867, 1892
Hpy8I	GTNNAC	9 cut(s)	81, 258, 584, 875, 1323, 1467, 1492, 2269, 2401
Hpy99I	CGWCG	4 cut(s)	82, 308, 329, 1558
HpyAV	CCTTC	7 cut(s)	1322, 1468, 1517, 2086, 2136, 2270, 2467
HpyCH4III	ACNGT	5 cut(s)	179, 308, 325, 1636, 1758
HpyCH4IV	ACGT	6 cut(s)	108, 548, 841, 1556, 2283, 2397
HpyF10VI	GCNNNNNNNGC	6 cut(s)	269, 1028, 1250, 1426, 1589, 2107
HpySE526I	ACGT	6 cut(s)	108, 548, 841, 1556, 2283, 2397
Hsp92I	GRCGYC	1 cut(s)	441
HspAI	GCGC	3 cut(s)	1956, 2294, 2430
Ksp22I	TGATCA	2 cut(s)	703, 2028
LguI	GCTCTTC	2 cut(s)	38, 684
LmnI	GCTCC	5 cut(s)	802, 1288, 2015, 2170, 2456
Lsp1109I	GCAGC	7 cut(s)	60, 63, 301, 360, 686, 1043, 1667
LweI	GCATC	4 cut(s)	657, 1635, 1777, 2295
MaeI	CTAG	5 cut(s)	450, 1113, 1409, 2262, 2520
MaeII	ACGT	6 cut(s)	108, 548, 841, 1556, 2283, 2397
MaeIII	GTNAC	5 cut(s)	308, 458, 842, 1068, 2161
MbiI	CCGCTC	2 cut(s)	66, 1719
MflI	RGATCY	1 cut(s)	68
MhlI	GDGCHC	3 cut(s)	285, 2180, 2461
MlsI	TGGCCA	1 cut(s)	944
MluNI	TGGCCA	1 cut(s)	944
MlyI	GAGTC	4 cut(s)	566, 739, 835, 2131
MmeI	TCCRAC	3 cut(s)	91, 1870, 2419
Mox20I	TGGCCA	1 cut(s)	944
Mph1103I	ATGCAT	3 cut(s)	401, 650, 1594
MroXI	GAANNNNTTC	1 cut(s)	191
MscI	TGGCCA	1 cut(s)	944
MseI	TTAA	5 cut(s)	783, 1647, 2052, 2319, 2480
MslI	CAYNNNNRTG	5 cut(s)	404, 722, 938, 2024, 2303
Msp20I	TGGCCA	1 cut(s)	944
MspA1I	CMGCKG	1 cut(s)	1253
MspCI	CTTAAG	1 cut(s)	1646
MspI	CCGG	5 cut(s)	95, 247, 264, 1886, 2462
MspR9I	CCNGG	4 cut(s)	319, 1425, 1665, 2427
Mva1269I	GAATGC	2 cut(s)	401, 1613
MvaI	CCWGG	4 cut(s)	319, 1425, 1665, 2427
MvnI	CGCG	4 cut(s)	119, 956, 1241, 2294
MwoI	GCNNNNNNNGC	6 cut(s)	269, 1028, 1250, 1426, 1589, 2107
NcoI	CCATGG	1 cut(s)	2415
NdeI	CATATG	1 cut(s)	708
NlaIV	GGNNCC	3 cut(s)	234, 1005, 2017
NmuCI	GTSAC	2 cut(s)	458, 842
NsiI	ATGCAT	3 cut(s)	401, 650, 1594
NspI	RCATGY	4 cut(s)	817, 1264, 1732, 1900
PagI	TCATGA	2 cut(s)	720, 2202
PceI	AGGCCT	1 cut(s)	272
PciI	ACATGT	2 cut(s)	1728, 1896
PciSI	GCTCTTC	2 cut(s)	38, 684
PctI	GAATGC	2 cut(s)	401, 1613
PdmI	GAANNNNTTC	1 cut(s)	191
PfeI	GAWTC	3 cut(s)	533, 882, 2523
Pfl23II	CGTACG	1 cut(s)	1950
PflMI	CCANNNNNTGG	1 cut(s)	1095
PfoI	TCCNGGA	1 cut(s)	1663
PinAI	ACCGGT	2 cut(s)	246, 2461
PkrI	GCNGC	9 cut(s)	50, 53, 316, 375, 676, 1033, 1243, 1657, 1721
PleI	GAGTC	4 cut(s)	566, 738, 834, 2131
PmaCI	CACGTG	1 cut(s)	842
PmlI	CACGTG	1 cut(s)	842
PpsI	GAGTC	4 cut(s)	566, 738, 834, 2131
Ppu21I	YACGTR	1 cut(s)	842
PscI	ACATGT	2 cut(s)	1728, 1896
PshAI	GACNNNNGTC	1 cut(s)	2360
PshBI	ATTAAT	1 cut(s)	783
Psp1406I	AACGTT	1 cut(s)	108
Psp6I	CCWGG	4 cut(s)	317, 1423, 1663, 2425
PspCI	CACGTG	1 cut(s)	842
PspFI	CCCAGC	1 cut(s)	2351
PspGI	CCWGG	4 cut(s)	317, 1423, 1663, 2425
PspLI	CGTACG	1 cut(s)	1950
PspN4I	GGNNCC	3 cut(s)	234, 1005, 2017
PspPI	GGNCC	8 cut(s)	244, 321, 1004, 1057, 1427, 1620, 1946, 1990
PsuI	RGATCY	1 cut(s)	68
RsaI	GTAC	9 cut(s)	341, 959, 1466, 1544, 1565, 1575, 1952, 1982, 2518
RsaNI	GTAC	9 cut(s)	340, 958, 1465, 1543, 1564, 1574, 1951, 1981, 2517
RseI	CAYNNNNRTG	5 cut(s)	404, 722, 938, 2024, 2303
SalI	GTCGAC	1 cut(s)	79
SapI	GCTCTTC	2 cut(s)	38, 684
SaqAI	TTAA	5 cut(s)	783, 1647, 2052, 2319, 2480
SatI	GCNGC	9 cut(s)	49, 52, 315, 374, 675, 1032, 1242, 1656, 1720
Sau96I	GGNCC	8 cut(s)	244, 321, 1004, 1057, 1427, 1620, 1946, 1990
ScaI	AGTACT	1 cut(s)	2518
SchI	GAGTC	4 cut(s)	566, 739, 835, 2131
ScrFI	CCNGG	4 cut(s)	319, 1425, 1665, 2427
SduI	GDGCHC	3 cut(s)	285, 2180, 2461
SfaNI	GCATC	4 cut(s)	657, 1635, 1777, 2295
SfiI	GGCCNNNNNGGCC	1 cut(s)	269
SinI	GGWCC	5 cut(s)	244, 321, 1620, 1946, 1990
SmiMI	CAYNNNNRTG	5 cut(s)	404, 722, 938, 2024, 2303
SmlI	CTYRAG	4 cut(s)	284, 830, 1646, 1965
SmoI	CTYRAG	4 cut(s)	284, 830, 1646, 1965
SpeI	ACTAGT	1 cut(s)	2261
SseBI	AGGCCT	1 cut(s)	272
SspMI	CTAG	5 cut(s)	450, 1113, 1409, 2262, 2520
StuI	AGGCCT	1 cut(s)	272
StyD4I	CCNGG	4 cut(s)	317, 1423, 1663, 2425
StyI	CCWWGG	5 cut(s)	426, 1388, 1852, 2067, 2415
TaaI	ACNGT	5 cut(s)	179, 308, 325, 1636, 1758
TaiI	ACGT	6 cut(s)	111, 551, 844, 1559, 2286, 2400
TaqI	TCGA	6 cut(s)	80, 134, 238, 251, 383, 2140
TaqII	GACCGA	3 cut(s)	317, 369, 503
TatI	WGTACW	2 cut(s)	1563, 2516
TauI	GCSGC	2 cut(s)	1244, 1722
TfiI	GAWTC	3 cut(s)	533, 882, 2523
Tru1I	TTAA	5 cut(s)	783, 1647, 2052, 2319, 2480
Tru9I	TTAA	5 cut(s)	783, 1647, 2052, 2319, 2480
TscAI	CASTG	3 cut(s)	993, 1236, 1383
TseFI	GTSAC	2 cut(s)	458, 842
TseI	GCWGC	7 cut(s)	48, 51, 314, 373, 674, 1031, 1655
Tsp45I	GTSAC	2 cut(s)	458, 842
TspDTI	ATGAA	5 cut(s)	422, 681, 1008, 1805, 2219
TspGWI	ACGGA	5 cut(s)	605, 1527, 1938, 2075, 2317
TspRI	CASTG	3 cut(s)	993, 1236, 1383
Van91I	CCANNNNNTGG	1 cut(s)	1095
Vha464I	CTTAAG	1 cut(s)	1646
VpaK11BI	GGWCC	5 cut(s)	244, 321, 1620, 1946, 1990
VspI	ATTAAT	1 cut(s)	783
XapI	RAATTY	5 cut(s)	386, 419, 500, 1274, 2498
XceI	RCATGY	4 cut(s)	817, 1264, 1732, 1900
XmiI	GTMKAC	5 cut(s)	80, 583, 1491, 2268, 2400
XmnI	GAANNNNTTC	1 cut(s)	191
XspI	CTAG	5 cut(s)	450, 1113, 1409, 2262, 2520
ZrmI	AGTACT	1 cut(s)	2518
Zsp2I	ATGCAT	3 cut(s)	401, 650, 1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.