RchiOBHm_Chr7g0188251

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004577
Physical Location & Seq
Forward (+)
7870102 .. 7877173
7072 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16810

Sequence Viewer

Length: 2778 bp
ATGAAGGAAACTGCCCCAGACGATCATATCGGAGCTGCTTCCGCCGGAGTAGCACCACCTCAGTATCACTCTGACACCGAGCTCGCCGGAACGGAGGAAATGTCCGGCGCAGGCTACAGCAGTCCGCTCAGTCTCAGCGGAACTCTGAACAAAAGAACAGGCAGCAAGAGGAGCAACAATGACGAACAAGAGCCTAACGTGGAGGTCACCCTCGACCTCCTCGACGACGACTCCGTCGCAGTCCGCAGCGTCAAGCCCCTGCCACGTGGCGGCGATGAGGACGAGCACCACCACAACACAGTCGACGACTCGCTCACTCTGCTAGGCGACAGTAAGGCGGCCGAGAAGAGCAACGACCAGTCGTTCGTCCGTACGGCCTCCATACGGATCAAGAAGGAGCTGAAGAAGCTGGCGTCATTCTCGAAGCAGCCGCAGCAACGGCGCCGTTTCGACAGGATGCAGTCGGCGGCTGCTCCGGCCTTGAAGGGGCTAAAGTTCATAAGCAAGACGGACGGGAATGCGGAGTGGCCGGCGGTCGAGAAAAGGTTCGACAAGCTCACCGGCTCGACCAACGGGATGCTGACACGTGCGGCGTTCGGAGAGTGCATAGGGATGAACAAAGACTGCAAGGAGTTCGCCGGAAAACTGTTCGATGCTTTGGCCAGGAAGCATGGTATCAAAGGCGACTCGATCAACAAGGAGGAGTTGAAGGAGATGTGGGGACAAGTTTCTGAGCAGGGCTTCAATTCCAGGCTTCAGATTTTCTTTGACATGGTTGACAAGGATGGAGATGGAAGAATCACTGTAGAAGAGGTTAAGGAGATTATTAGCTTCAGTGCTTCTGCCAACAAACTATCAAACATCCAGAAACAAGCAGATGAATATGCAGCATTGATCATGGAAGAGTTGGATCCGGACAATCTTGGATACATCATGATAGAAAGTTTGGAGATGCTCCTACTATATGGACCGCAGGAGACGGTGGTGCGAGGAAAAGAAAGCCGGAACCTGAGCAAAATGATGAGCCAGAAGCTCAAGCCGGTAAGGGAGGACAACCCTCTGAGGAGGTGGTATAGGAGCACCAACTACTTTCTTGAAGACAATTGGCAGAGAGTTTGGGTAATGGCACTGTGGATTGGGATCATGGCTGGTCTATTTGCCTATAAGTATGTGCAGTATAAAAACAGGGCTGCATATCAAGTAATGGGTCATTGTGTATCCATGGCCAAAGGTGCAGCTGAGACACTCAAGTTCAACATGGCTCTTATTCTACTTCCAGTGTGCAGAAACACTATCACTCTTCTGAGGAACAAGACCAAATTGGGTGTTGCTATTCCTTTTGATGACAACCTCAATTTCCATAAGGTGATAGCTATTGGAATTTCAGTAGGAGTTGGCATACACTCAATTTACCATTTGGCCTGTGATTTCCCTCGTCTTATTAAAGCTGACGGTGACAAGTACGCCCCGATGAAGCAATTTTTTGGGGAACAACCTTCAAACTATTCGTTTTTTCTGAAATCAGTGGAAGGAGTAACTGGCATTATAATGGTAGTGTTGATGACAATAGCCTTCACACTAGCAGCACCATGTTTTAGAAGAGGTAGGCTCAAGAACCTTCCCCAACCTCTCAAGAGGCTCACAGGCTTCAATGCCTTTTGGTACTCCCATCACCTTTTCGTCATTGTCTATACTTTGCTCATTGTCCATGGAGAGTACCTGTACCTCACCAAGGAATGGTACAAGAAAACGACTTGGATGTACTTGGCTGTTCCGCTTCTCCTTTACGGAGGTGAAAGATTGGTTCGGGCGTTTCGATCTAGCATCAAGCCTGTTAAGATAGTTAAGGTGGCTCTATATCCTGGAAATGTGTTGGCACTTCATATGTCAAAGCCTCAAGGCTTCAGATACCATAGTGGGCAATACATGTTTATTAATTGTGCTGCTGTCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCGGCCCCAGGAGACGACCACCTCAGTGTTCATATCCGGACTCTTGGCGACTGGACGCAACAACTTAAAACAGTATTTTCACAAGTTTGCCAACCACCTCCTTCTGGGAAGAGTGGACTCCTCAGAGCCGACTGTGTGCAGGGCAACGACTTAAACTTTCCAAGAGTGCTAATAGATGGACCCTATGGAGCACCAGCTCAAGACTACAAGAAATACGAAGTGGTGTTACTTGTAGGGTTGGGAATAGGAGCAACCCCAATGATAAGCATCCTCAAGGACATAGTAAACAACATCAAAGCCATAGAGGAGGAATCAGAGAACGCCCTAGAAAGCGGCACGGCCGGTTCCGGAGCCCCAGTGAGCCTCCACGGCAACTTCAAGACCAAGAGGGCCTACTTCTATTGGGTGACTCGAGAGCAAGGTTCGTTCGACTGGTTCAAAGGGGCCATGAACGAGGTGGCGGAGCTGGACCATAACAGAGTGATAGAGTTCCACAACTATTGCACTAGTGTTTATGAGGAAGGTGATGCACGTTCTGCTCTCATTGCTATGCTTCAGTCACTCAATCATGCCAAGAATGGGGTCGATATTGTGTCGGGTACTAGGGTGAAGTCACATTTTGCTAAGCCTAACTGGCGTGAGGTCTACAAGCGCATTGCGCTGGATCACACCAATGCCAAAGTTGGGGTGTTCTACTGCGGGCCACCTGCTCTTACTGAAGAACTACGACAGCTAGCTCTGGATTTCAACCACAAAACCTCCACCAGATTTGAATTCCATAAAGAAAATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

925

Amino Acids

103.87

Weight (kDa)

8.74

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 149 - 250 1.9e-34 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 250 - 311 1.6e-06 EF-hand domain pair
Ferric_reduct PF01794 420 - 567 1.1e-11 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 611 - 727 8.1e-36 FAD-binding domain
NAD_binding_6 PF08030 733 - 907 2.3e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1547
AarI CACCTGC 1 cut(s) 2698
AasI GACNNNNNNGTC 1 cut(s) 233
Acc36I ACCTGC 1 cut(s) 2698
AccB1I GGYRCC 2 cut(s) 441, 1965
AccB7I CCANNNNNTGG 1 cut(s) 1737
AccBSI CCGCTC 1 cut(s) 127
AccI GTMKAC 2 cut(s) 303, 2628
AccIII TCCGGA 3 cut(s) 913, 2019, 2330
AclWI GGATC 5 cut(s) 395, 905, 918, 1148, 2655
AcoI YGGCCR 5 cut(s) 339, 527, 660, 1224, 2322
AcsI RAATTY 3 cut(s) 1380, 2756, 2770
AcuI CTGAAG 6 cut(s) 422, 740, 817, 1888, 2522, 2721
AcvI CACGTG 2 cut(s) 266, 587
AcyI GRCGYC 2 cut(s) 413, 442
AfaI GTAC 8 cut(s) 373, 1463, 1664, 1718, 1724, 1742, 1763, 2584
AfiI CCNNNNNNNGG 8 cut(s) 269, 384, 486, 1732, 1737, 2087, 2562, 2667
AflIII ACRYGT 2 cut(s) 584, 1926
AhlI ACTAGT 1 cut(s) 2489
AjnI CCWGG 4 cut(s) 662, 749, 1861, 1990
AleI CACNNNNGTG 1 cut(s) 2007
Alw21I GWGCWC 4 cut(s) 84, 288, 1082, 2176
Alw26I GTCTC 5 cut(s) 137, 971, 1235, 1954, 1989
AlwI GGATC 5 cut(s) 395, 905, 918, 1148, 2655
Ama87I CYCGRG 1 cut(s) 2394
Aor13HI TCCGGA 3 cut(s) 913, 2019, 2330
ApoI RAATTY 3 cut(s) 1380, 2756, 2770
ArsI GACNNNNNNTTYG 2 cut(s) 347, 379
AseI ATTAAT 1 cut(s) 1935
Asp700I GAANNNNTTC 1 cut(s) 545
AspLEI GCGC 4 cut(s) 110, 444, 2637, 2644
AspS9I GGNCC 7 cut(s) 968, 1987, 2162, 2373, 2427, 2452, 2684
AsuNHI GCTAGC 1 cut(s) 2716
AvaI CYCGRG 1 cut(s) 2394
AvaII GGWCC 3 cut(s) 968, 2162, 2452
BaeI ACNNNNGTAYC 6 cut(s) 47, 80, 1900, 1933, 2574, 2607
BalI TGGCCA 2 cut(s) 662, 1226
BamHI GGATCC 1 cut(s) 910
BanI GGYRCC 2 cut(s) 441, 1965
BanII GRGCYC 2 cut(s) 84, 2338
BarI GAAGNNNNNNTAC 2 cut(s) 2193, 2225
BbrPI CACGTG 2 cut(s) 266, 587
BbsI GAAGAC 1 cut(s) 1104
Bbv12I GWGCWC 4 cut(s) 84, 288, 1082, 2176
BccI CCATC 5 cut(s) 779, 785, 1677, 1985, 2153
BceAI ACGGC 5 cut(s) 390, 429, 455, 2337, 2368
BcgI CGANNNNNNTGC 2 cut(s) 616, 650
BciT130I CCWGG 4 cut(s) 664, 751, 1863, 1992
BciVI GTATCC 2 cut(s) 920, 1228
BclI TGATCA 1 cut(s) 894
BcoDI GTCTC 5 cut(s) 137, 971, 1235, 1954, 1989
BcuI ACTAGT 1 cut(s) 2489
BfaI CTAG 7 cut(s) 323, 1580, 1821, 2309, 2490, 2586, 2717
BfmI CTRYAG 2 cut(s) 115, 804
BfoI RGCGCY 1 cut(s) 445
BfuAI ACCTGC 1 cut(s) 2698
BfuI GTATCC 2 cut(s) 920, 1228
BglI GCCNNNNNGGC 2 cut(s) 2352, 2617
BlpI GCTNAGC 1 cut(s) 2607
Bme1390I CCNGG 4 cut(s) 664, 751, 1863, 1992
Bme18I GGWCC 3 cut(s) 968, 2162, 2452
BmeT110I CYCGRG 1 cut(s) 2394
BmgT120I GGNCC 7 cut(s) 968, 1987, 2162, 2373, 2427, 2452, 2684
BmiI GGNNCC 9 cut(s) 443, 912, 1007, 1967, 1989, 2164, 2329, 2335, 2428
BmrFI CCNGG 4 cut(s) 664, 751, 1863, 1992
BmrI ACTGGG 1 cut(s) 2333
BmsI GCATC 7 cut(s) 447, 567, 643, 942, 1833, 2259, 2500
BmtI GCTAGC 1 cut(s) 2720
BmuI ACTGGG 1 cut(s) 2333
BpiI GAAGAC 1 cut(s) 1104
BplI GAGNNNNNCTC 2 cut(s) 1593, 1625
Bpu10I CCTNAGC 1 cut(s) 1010
Bpu1102I GCTNAGC 1 cut(s) 2607
BpuEI CTTGAG 7 cut(s) 1019, 1232, 1595, 1616, 1881, 2166, 2240
BsaAI YACGTR 2 cut(s) 266, 587
BsaBI GATNNNNATC 2 cut(s) 1139, 2249
BsaHI GRCGYC 2 cut(s) 413, 442
BsaJI CCNNGG 6 cut(s) 1221, 1708, 1731, 1983, 1990, 2350
BsaWI WCCGGW 3 cut(s) 913, 2019, 2330
BsaXI ACNNNNNCTCC 8 cut(s) 86, 116, 215, 245, 2325, 2355, 2726, 2756
Bsc4I CCNNNNNNNGG 8 cut(s) 269, 384, 486, 1732, 1737, 2087, 2562, 2667
Bse118I RCCGGY 4 cut(s) 529, 560, 1039, 2324
Bse1I ACTGG 7 cut(s) 358, 1277, 1543, 2039, 2339, 2420, 2621
Bse3DI GCAATG 2 cut(s) 2526, 2637
Bse8I GATNNNNATC 2 cut(s) 1139, 2249
BseAI TCCGGA 3 cut(s) 913, 2019, 2330
BseBI CCWGG 4 cut(s) 664, 751, 1863, 1992
BseDI CCNNGG 6 cut(s) 1221, 1708, 1731, 1983, 1990, 2350
BseGI GGATG 7 cut(s) 462, 582, 618, 790, 861, 1764, 2250
BseJI GATNNNNATC 2 cut(s) 1139, 2249
BseLI CCNNNNNNNGG 8 cut(s) 269, 384, 486, 1732, 1737, 2087, 2562, 2667
BseMI GCAATG 2 cut(s) 2526, 2637
BseNI ACTGG 7 cut(s) 358, 1277, 1543, 2039, 2339, 2420, 2621
BseRI GAGGAG 6 cut(s) 184, 209, 716, 1078, 2093, 2303
BseX3I CGGCCG 2 cut(s) 339, 2322
BsgI GTGCAG 4 cut(s) 1193, 1254, 1303, 2141
Bsh1285I CGRYCG 3 cut(s) 342, 537, 2325
BshNI GGYRCC 2 cut(s) 441, 1965
BsiEI CGRYCG 3 cut(s) 342, 537, 2325
BsiHKAI GWGCWC 4 cut(s) 84, 288, 1082, 2176
BsiHKCI CYCGRG 1 cut(s) 2394
BsiWI CGTACG 1 cut(s) 371
BslFI GGGAC 1 cut(s) 735
BslI CCNNNNNNNGG 8 cut(s) 269, 384, 486, 1732, 1737, 2087, 2562, 2667
BsmAI GTCTC 5 cut(s) 137, 971, 1235, 1954, 1989
BsmBI CGTCTC 2 cut(s) 971, 1989
BsmFI GGGAC 1 cut(s) 735
BsmI GAATGC 1 cut(s) 523
BsoBI CYCGRG 1 cut(s) 2394
Bsp1286I GDGCHC 5 cut(s) 84, 288, 1082, 2176, 2338
Bsp13I TCCGGA 3 cut(s) 913, 2019, 2330
Bsp143I GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
Bsp1720I GCTNAGC 1 cut(s) 2607
Bsp19I CCATGG 2 cut(s) 1221, 1708
BspEI TCCGGA 3 cut(s) 913, 2019, 2330
BspHI TCATGA 1 cut(s) 933
BspLI GGNNCC 9 cut(s) 443, 912, 1007, 1967, 1989, 2164, 2329, 2335, 2428
BspMI ACCTGC 1 cut(s) 2698
BspOI GCTAGC 1 cut(s) 2720
BspPI GGATC 5 cut(s) 395, 905, 918, 1148, 2655
BspQI GCTCTTC 1 cut(s) 341
BspT107I GGYRCC 2 cut(s) 441, 1965
BsrBI CCGCTC 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 2526, 2637
BsrFI RCCGGY 4 cut(s) 529, 560, 1039, 2324
BsrI ACTGG 7 cut(s) 358, 1277, 1543, 2039, 2339, 2420, 2621
BssAI RCCGGY 4 cut(s) 529, 560, 1039, 2324
BssECI CCNNGG 6 cut(s) 1221, 1708, 1731, 1983, 1990, 2350
BssMI GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
BssNI GRCGYC 2 cut(s) 413, 442
BssT1I CCWWGG 3 cut(s) 1221, 1708, 1731
Bst2UI CCWGG 4 cut(s) 664, 751, 1863, 1992
Bst4CI ACNGT 9 cut(s) 301, 332, 648, 805, 982, 1131, 1454, 2056, 2117
Bst6I CTCTTC 6 cut(s) 341, 804, 897, 1305, 1594, 2087
BstACI GRCGYC 2 cut(s) 413, 442
BstAPI GCANNNNNTGC 1 cut(s) 2519
BstBAI YACGTR 2 cut(s) 266, 587
BstC8I GCNNGC 6 cut(s) 84, 112, 411, 531, 2684, 2718
BstDSI CCRYGG 3 cut(s) 1221, 1708, 2350
BstEII GGTNACC 1 cut(s) 205
BstENI CCTNNNNNAGG 1 cut(s) 1730
BstF5I GGATG 7 cut(s) 462, 582, 618, 790, 861, 1764, 2250
BstH2I RGCGCY 1 cut(s) 445
BstHHI GCGC 4 cut(s) 110, 444, 2637, 2644
BstKTI GATC 8 cut(s) 25, 390, 693, 897, 913, 1143, 1820, 2650
BstMAI GTCTC 5 cut(s) 137, 971, 1235, 1954, 1989
BstMBI GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
BstMCI CGRYCG 3 cut(s) 342, 537, 2325
BstNI CCWGG 4 cut(s) 664, 751, 1863, 1992
BstNSI RCATGY 1 cut(s) 1930
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 4 cut(s) 662, 749, 1861, 1990
BstSFI CTRYAG 2 cut(s) 115, 804
BstV2I GAAGAC 1 cut(s) 1104
BstX2I RGATCY 1 cut(s) 910
BstXI CCANNNNNNTGG 1 cut(s) 1962
BstYI RGATCY 1 cut(s) 910
BstZI CGGCCG 2 cut(s) 339, 2322
BsuI GTATCC 2 cut(s) 920, 1228
BtgI CCRYGG 3 cut(s) 1221, 1708, 2350
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 7 cut(s) 462, 582, 618, 790, 861, 1764, 2250
BtsIMutI CAGTG 7 cut(s) 801, 841, 1127, 1284, 1530, 2014, 2346
BveI ACCTGC 1 cut(s) 2698
Cac8I GCNNGC 6 cut(s) 84, 112, 411, 531, 2684, 2718
CciI TCATGA 1 cut(s) 933
CfoI GCGC 4 cut(s) 110, 444, 2637, 2644
Cfr10I RCCGGY 4 cut(s) 529, 560, 1039, 2324
Cfr13I GGNCC 7 cut(s) 968, 1987, 2162, 2373, 2427, 2452, 2684
CseI GACGC 3 cut(s) 238, 402, 2047
Csp6I GTAC 8 cut(s) 372, 1462, 1663, 1717, 1723, 1741, 1762, 2583
CspCI CAANNNNNGTGG 4 cut(s) 2465, 2500, 2734, 2769
CviQI GTAC 8 cut(s) 372, 1462, 1663, 1717, 1723, 1741, 1762, 2583
DinI GGCGCC 1 cut(s) 443
DpnI GATC 8 cut(s) 24, 389, 692, 896, 912, 1142, 1819, 2649
DpnII GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
DrdI GACNNNNNNGTC 1 cut(s) 233
DseDI GACNNNNNNGTC 1 cut(s) 233
EaeI YGGCCR 5 cut(s) 339, 527, 660, 1224, 2322
EagI CGGCCG 2 cut(s) 339, 2322
Eam1104I CTCTTC 6 cut(s) 341, 804, 897, 1305, 1594, 2087
EarI CTCTTC 6 cut(s) 341, 804, 897, 1305, 1594, 2087
EciI GGCGGA 2 cut(s) 31, 2459
Ecl136II GAGCTC 1 cut(s) 82
EclXI CGGCCG 2 cut(s) 339, 2322
Eco130I CCWWGG 3 cut(s) 1221, 1708, 1731
Eco24I GRGCYC 2 cut(s) 84, 2338
Eco47I GGWCC 3 cut(s) 968, 2162, 2452
Eco52I CGGCCG 2 cut(s) 339, 2322
Eco53kI GAGCTC 1 cut(s) 82
Eco57I CTGAAG 6 cut(s) 422, 740, 817, 1888, 2522, 2721
Eco72I CACGTG 2 cut(s) 266, 587
Eco88I CYCGRG 1 cut(s) 2394
Eco91I GGTNACC 1 cut(s) 205
EcoICRI GAGCTC 1 cut(s) 82
EcoNI CCTNNNNNAGG 1 cut(s) 1730
EcoO109I RGGNCCY 1 cut(s) 2373
EcoO65I GGTNACC 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 2756
EcoRII CCWGG 4 cut(s) 662, 749, 1861, 1990
EcoT14I CCWWGG 3 cut(s) 1221, 1708, 1731
EcoT38I GRGCYC 2 cut(s) 84, 2338
EgeI GGCGCC 1 cut(s) 443
EheI GGCGCC 1 cut(s) 443
ErhI CCWWGG 3 cut(s) 1221, 1708, 1731
Esp3I CGTCTC 2 cut(s) 971, 1989
FaqI GGGAC 1 cut(s) 735
FauI CCCGC 1 cut(s) 2675
FauNDI CATATG 1 cut(s) 1884
FbaI TGATCA 1 cut(s) 894
FblI GTMKAC 2 cut(s) 303, 2628
FokI GGATG 7 cut(s) 469, 589, 625, 797, 848, 1771, 2237
FriOI GRGCYC 2 cut(s) 84, 2338
FspBI CTAG 7 cut(s) 323, 1580, 1821, 2309, 2490, 2586, 2717
GlaI GCGC 4 cut(s) 109, 443, 2636, 2643
HaeII RGCGCY 1 cut(s) 445
HgaI GACGC 3 cut(s) 238, 402, 2047
HhaI GCGC 4 cut(s) 110, 444, 2637, 2644
Hin1I GRCGYC 2 cut(s) 413, 442
Hin6I GCGC 4 cut(s) 108, 442, 2635, 2642
HinP1I GCGC 4 cut(s) 108, 442, 2635, 2642
HincII GTYRAC 2 cut(s) 304, 778
HindII GTYRAC 2 cut(s) 304, 778
HinfI GANTC 8 cut(s) 230, 308, 686, 798, 2023, 2100, 2294, 2392
Hpy166II GTNNAC 5 cut(s) 304, 778, 2099, 2269, 2629
Hpy8I GTNNAC 5 cut(s) 304, 778, 2099, 2269, 2629
Hpy99I CGWCG 4 cut(s) 227, 230, 239, 308
HpyAV CCTTC 9 cut(s) 388, 478, 703, 1506, 1523, 1582, 1628, 2094, 2498
HpyCH4III ACNGT 9 cut(s) 301, 332, 648, 805, 982, 1131, 1454, 2056, 2117
HpyCH4IV ACGT 4 cut(s) 198, 265, 586, 2515
HpySE526I ACGT 4 cut(s) 198, 265, 586, 2515
Hsp92I GRCGYC 2 cut(s) 413, 442
HspAI GCGC 4 cut(s) 108, 442, 2635, 2642
KasI GGCGCC 1 cut(s) 441
Kpn2I TCCGGA 3 cut(s) 913, 2019, 2330
KroI GCCGGC 1 cut(s) 529
KroNI GCCGGC 1 cut(s) 531
Ksp22I TGATCA 1 cut(s) 894
Kzo9I GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
LguI GCTCTTC 1 cut(s) 341
LweI GCATC 7 cut(s) 447, 567, 643, 942, 1833, 2259, 2500
MaeI CTAG 7 cut(s) 323, 1580, 1821, 2309, 2490, 2586, 2717
MaeII ACGT 4 cut(s) 198, 265, 586, 2515
MaeIII GTNAC 7 cut(s) 205, 1454, 1534, 2208, 2389, 2541, 2595
MalI GATC 8 cut(s) 24, 389, 692, 896, 912, 1142, 1819, 2649
MbiI CCGCTC 1 cut(s) 127
MboI GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
MfeI CAATTG 1 cut(s) 1102
MflI RGATCY 1 cut(s) 910
MhlI GDGCHC 5 cut(s) 84, 288, 1082, 2176, 2338
MlsI TGGCCA 2 cut(s) 662, 1226
MluNI TGGCCA 2 cut(s) 662, 1226
Mly113I GGCGCC 1 cut(s) 442
MlyI GAGTC 6 cut(s) 224, 302, 680, 2017, 2094, 2386
MmeI TCCRAC 1 cut(s) 888
Mox20I TGGCCA 2 cut(s) 662, 1226
MroI TCCGGA 3 cut(s) 913, 2019, 2330
MroNI GCCGGC 1 cut(s) 529
MroXI GAANNNNTTC 1 cut(s) 545
MscI TGGCCA 2 cut(s) 662, 1226
MseI TTAA 7 cut(s) 816, 1443, 1836, 1845, 1935, 2049, 2135
MslI CAYNNNNRTG 6 cut(s) 611, 1547, 1960, 2007, 2531, 2655
Msp20I TGGCCA 2 cut(s) 662, 1226
MspA1I CMGCKG 2 cut(s) 138, 1238
MspR9I CCNGG 4 cut(s) 664, 751, 1863, 1992
MunI CAATTG 1 cut(s) 1102
Mva1269I GAATGC 1 cut(s) 523
MvaI CCWGG 4 cut(s) 664, 751, 1863, 1992
NaeI GCCGGC 1 cut(s) 531
NarI GGCGCC 1 cut(s) 442
NcoI CCATGG 2 cut(s) 1221, 1708
NdeI CATATG 1 cut(s) 1884
NdeII GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
NgoMIV GCCGGC 1 cut(s) 529
NheI GCTAGC 1 cut(s) 2716
NlaIV GGNNCC 9 cut(s) 443, 912, 1007, 1967, 1989, 2164, 2329, 2335, 2428
NmeAIII GCCGAG 2 cut(s) 367, 1964
NmuCI GTSAC 5 cut(s) 205, 1454, 2389, 2541, 2595
NspI RCATGY 1 cut(s) 1930
OliI CACNNNNGTG 1 cut(s) 2007
PaeR7I CTCGAG 1 cut(s) 2394
PagI TCATGA 1 cut(s) 933
PaqCI CACCTGC 1 cut(s) 2698
PciI ACATGT 1 cut(s) 1926
PciSI GCTCTTC 1 cut(s) 341
PcsI WCGNNNNNNNCGW 3 cut(s) 219, 231, 1813
PctI GAATGC 1 cut(s) 523
PdiI GCCGGC 1 cut(s) 531
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 2 cut(s) 798, 2294
Pfl23II CGTACG 1 cut(s) 371
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 1737
PfoI TCCNGGA 1 cut(s) 1861
PleI GAGTC 6 cut(s) 224, 302, 680, 2017, 2094, 2386
PluTI GGCGCC 1 cut(s) 445
PmaCI CACGTG 2 cut(s) 266, 587
PmlI CACGTG 2 cut(s) 266, 587
PpsI GAGTC 6 cut(s) 224, 302, 680, 2017, 2094, 2386
Ppu21I YACGTR 2 cut(s) 266, 587
PscI ACATGT 1 cut(s) 1926
PshBI ATTAAT 1 cut(s) 1935
PsiI TTATAA 1 cut(s) 1547
Psp124BI GAGCTC 1 cut(s) 84
Psp6I CCWGG 4 cut(s) 662, 749, 1861, 1990
PspCI CACGTG 2 cut(s) 266, 587
PspEI GGTNACC 1 cut(s) 205
PspGI CCWGG 4 cut(s) 662, 749, 1861, 1990
PspLI CGTACG 1 cut(s) 371
PspN4I GGNNCC 9 cut(s) 443, 912, 1007, 1967, 1989, 2164, 2329, 2335, 2428
PspPI GGNCC 7 cut(s) 968, 1987, 2162, 2373, 2427, 2452, 2684
PsuI RGATCY 1 cut(s) 910
PsyI GACNNNGTC 1 cut(s) 233
PvuII CAGCTG 1 cut(s) 1238
RsaI GTAC 8 cut(s) 373, 1463, 1664, 1718, 1724, 1742, 1763, 2584
RsaNI GTAC 8 cut(s) 372, 1462, 1663, 1717, 1723, 1741, 1762, 2583
RseI CAYNNNNRTG 6 cut(s) 611, 1547, 1960, 2007, 2531, 2655
SacI GAGCTC 1 cut(s) 84
SalI GTCGAC 1 cut(s) 302
SapI GCTCTTC 1 cut(s) 341
SaqAI TTAA 7 cut(s) 816, 1443, 1836, 1845, 1935, 2049, 2135
Sau3AI GATC 8 cut(s) 22, 387, 690, 894, 910, 1140, 1817, 2647
Sau96I GGNCC 7 cut(s) 968, 1987, 2162, 2373, 2427, 2452, 2684
SchI GAGTC 6 cut(s) 224, 302, 680, 2017, 2094, 2386
ScrFI CCNGG 4 cut(s) 664, 751, 1863, 1992
SduI GDGCHC 5 cut(s) 84, 288, 1082, 2176, 2338
SfaNI GCATC 7 cut(s) 447, 567, 643, 942, 1833, 2259, 2500
SfcI CTRYAG 2 cut(s) 115, 804
SfoI GGCGCC 1 cut(s) 443
Sfr274I CTCGAG 1 cut(s) 2394
SinI GGWCC 3 cut(s) 968, 2162, 2452
SlaI CTCGAG 1 cut(s) 2394
SmiMI CAYNNNNRTG 6 cut(s) 611, 1547, 1960, 2007, 2531, 2655
SmlI CTYRAG 8 cut(s) 1034, 1247, 1610, 1631, 1896, 2181, 2255, 2394
SmoI CTYRAG 8 cut(s) 1034, 1247, 1610, 1631, 1896, 2181, 2255, 2394
SpeI ACTAGT 1 cut(s) 2489
SspDI GGCGCC 1 cut(s) 441
SspMI CTAG 7 cut(s) 323, 1580, 1821, 2309, 2490, 2586, 2717
SstI GAGCTC 1 cut(s) 84
StyD4I CCNGG 4 cut(s) 662, 749, 1861, 1990
StyI CCWWGG 3 cut(s) 1221, 1708, 1731
TaaI ACNGT 9 cut(s) 301, 332, 648, 805, 982, 1131, 1454, 2056, 2117
TaiI ACGT 4 cut(s) 201, 268, 589, 2518
TatI WGTACW 1 cut(s) 1761
TauI GCSGC 6 cut(s) 273, 341, 433, 470, 593, 2319
TfiI GAWTC 2 cut(s) 798, 2294
Tru1I TTAA 7 cut(s) 816, 1443, 1836, 1845, 1935, 2049, 2135
Tru9I TTAA 7 cut(s) 816, 1443, 1836, 1845, 1935, 2049, 2135
TscAI CASTG 7 cut(s) 808, 841, 1134, 1284, 1530, 2014, 2346
TseFI GTSAC 5 cut(s) 205, 1454, 2389, 2541, 2595
Tsp45I GTSAC 5 cut(s) 205, 1454, 2389, 2541, 2595
TspDTI ATGAA 8 cut(s) 17, 487, 629, 894, 1487, 1871, 2003, 2447
TspGWI ACGGA 6 cut(s) 107, 223, 359, 400, 524, 1803
TspRI CASTG 7 cut(s) 808, 841, 1134, 1284, 1530, 2014, 2346
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 1 cut(s) 1737
VpaK11BI GGWCC 3 cut(s) 968, 2162, 2452
VspI ATTAAT 1 cut(s) 1935
XagI CCTNNNNNAGG 1 cut(s) 1730
XapI RAATTY 3 cut(s) 1380, 2756, 2770
XceI RCATGY 1 cut(s) 1930
XcmI CCANNNNNNNNNTGG 1 cut(s) 2437
XhoI CTCGAG 1 cut(s) 2394
XmiI GTMKAC 2 cut(s) 303, 2628
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 7 cut(s) 323, 1580, 1821, 2309, 2490, 2586, 2717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.