Rw7G008080

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004577
Physical Location & Seq
Forward (+)
7422836 .. 7429299
6464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G008080.1

Sequence Viewer

Length: 2745 bp
ATGAAGAAAACTGCCCCAGACGATCATATCGGAGCTGCTTCCGCCGGAGTAGCACCACCTCAGTATCACTCTGACACTGAGCTCGCCGGAAAGGAGGAAATGTCCGGCGCAGGCTACAGCAGTCCGCTCAGTCTCAGCGGAACTCTGAACAAAAGAACAGGCAGCAAGAGGAGCAACAATGACGAACAAGAGCCTAACGTGGAGGTCACCCTCGACCTCCTCGACGACGACTCCGTCGCAGTCCGCAGCGTCAAGCCCCTGCCACGTGGCGGCGATGAGGACGAGCACCACCACAACACAGTCGACGACTCGCTCACTCTGCTCGGCGGCGACAGTAAGGCAGCCGAGAAGAGCAACGACCAGTCGTTCGTCCGTACGGCCTCCATACGGATCAAGAAGGAGCTGAAGAAGCTGGCGTCGTTCTCGAAGCAGCCGCAGCAACAGCGCCGTTTCGACCGGATGCAGTCGGCGGCTGCTCCGGCCTTGAAGGGGCTAAAGTTCATAAGCAAGACGGACGGGAATGCGGAGTGGCCGGCGGTCGAGAAAAGGTTCGACAAGCTCACCGGCTCGACCAACGGGATGCTGACACACTGCAAGGAGTTCGCCGGAAAACTGTTCGATGCTTTGGCCAGGAAGCATGGTATCAAAGGCGACTCGATCAACAAGGAGGAGTTGAAGGAGATGTGGGGACAAGTTTCTGAGCAGGGCTTCAATTCCAGGCTTCAGATTTTCTTTGACATGGTTGACAAGGATGGAGATGGAAGAATCACTGTAGAAGAGGTTAAGGAGATTATTAGCTTCAGTGCTTCTGCCAACAAACTATCAAACATCCAGAAACAAGCAGATGAATATGCAGCATTGATCATGGAAGAGTTGGATCCGGACAATCTTGGATACATCATGATAGAAAGTTTGGAGATGCTCCTACTATATGGACCGCAGGAGACGGTGGTGCGAGGAAAAGAAAGCCGGAACCTGAGCAAAATGATGAGCCAGAAGCTCAAGCCGGTAAGGGAGGACAACCCTCTGAGGAGGTGGTATAGGAGCACCAACTACTTTCTTGAAGACAATTGGCAGAGAGTTTGGGTAATGGCACTGTGGATTGGGATCATGGCTGGTCTATTTGCCTATAAGTATGTGCAGTATAAAAACAGGGCTGCATATCAAGTAATGGGTCATTGTGTATCCATGGCCAAAGGTGCAGCTGAGACACTCAAGTTCAACATGGCTCTTATTCTACTTCCAGTGTGCAGAAACACTATCACTCTTCTGAGGAACAAGACCAAATTGGGTGTTGCTATTCCTTTTGATGACAACCTCAATTTCCATAAGGTGATAGCTATTGGAATTTCAGTAGGAGTTGGCATACACTCAATTTACCATTTGGCCTGTGATTTCCCTCGTCTCATTAAAGCAGACAGTGACAAGTACGCCCCGATGAAGCAATTTTTTGGGGAACAACCTTCCAACTATTGGTTTTTTCTGAAATCAGTGGAAGGAGTAACTGGCATTATAATGGTAGTGTTGATGACAATAGCCTTCACACTAGCAGCACCATGTTTTAGAAGAGGTAGGCTCAAGAACCTGCCCCAACCTCTCAAGAGGCTCACAGGCTTCAATGCCTTTTGGTACTCCCATCACCTCTTCGTCATTGTCTATACTTTGCTCATTGTCCATGGAGAGTACCTGTACCTCACCAAGGAATGGTACAAGAAAACGACTTGGATGTACTTGGCTGTTCCGCTTCTCCTTTACGGAGGTGAAAGATTGGTTCGGGCGTTTCGATCTAGCATCAAGCCTGTTAAGATAGTTAAGGTGGCTCTATATCCTGGAAATGTGTTGGCACTTCATATGTCAAAGCCTCAAGGCTTCAGATACCATAGTGGGCAATACATGTTTATTAATTGTGCTGCTGTCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCGGCCCCAGGAGACGACCACCTCAGTGTTCATATCCGGACTCTTGGCGACTGGACGCAACAACTTAAAACAGTATTTTCACAAGTTTGCCAACCACCTCCTTCTGGGAAGAGTGGACTCCTCAGAGCCGACTGTGTGCAGGGCAACGACTTAAACTTTCCAAGAGTGCTAATAGATGGACCCTATGGAGCACCAGCGCAAGACTACAAGAAATACGAAGTGGTGTTACTTGTAGGGTTGGGAATAGGAGCAACCCCAATGATAAGCATCCTCAAGGACATAGTAAACAACATCAAAGCCATAGAGGAGGAATCAGAGAATGCGCTAGAAAGCGGCACGGCTGGTTCCGGAGCCCCAGTGAGCCTCCACGGCAACTTCAAGACCAAGAGGGCCTACTTCTATTGGGTGACTCGAGAGCAAGGTTCGTTCGACTGGTTCAAAGGGGCCATGAACGAGGTGGCGGAGCTGGACCACAACAGAGTGATAGAGTTCCACAACTATTGCACTAGTGTTTATGAGGAAGGTGATGCACGTTCTGCTCTCATTGCTATGCTTCAGTCACTCAATCATGCCAAGAATGGGGTCGATATTGTGTCGGGTACTAGGGTGAAGTCACATTTTGCTAAGCCTAACTGGCGTGAGGTCTACAAGCGCATTGCGCTGGATCACACCAATGCCAAAGTTGGGGTGTTCTACTGCGGGCCACCTGCTCTTACTGAAGAACTACGACAGCTAGCTCTGGATTTCAACCACAAAACCTCCACCAGATTTGAATTCCATAAAGAAAATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

914

Amino Acids

102.8

Weight (kDa)

8.86

Isoelectric Point (pI)

38.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 150 - 239 1.9e-22 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 239 - 300 1.6e-06 EF-hand domain pair
Ferric_reduct PF01794 409 - 556 8.9e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 600 - 716 8e-36 FAD-binding domain
NAD_binding_6 PF08030 722 - 896 2.3e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1514
AarI CACCTGC 1 cut(s) 2665
AasI GACNNNNNNGTC 1 cut(s) 233
Acc36I ACCTGC 2 cut(s) 1593, 2665
AccB1I GGYRCC 1 cut(s) 1932
AccB7I CCANNNNNTGG 2 cut(s) 1473, 1704
AccBSI CCGCTC 1 cut(s) 127
AccI GTMKAC 2 cut(s) 303, 2595
AccIII TCCGGA 3 cut(s) 880, 1986, 2297
AclWI GGATC 5 cut(s) 398, 872, 885, 1115, 2622
AcoI YGGCCR 3 cut(s) 530, 627, 1191
AcsI RAATTY 3 cut(s) 1347, 2723, 2737
AcuI CTGAAG 6 cut(s) 425, 707, 784, 1855, 2489, 2688
AcvI CACGTG 1 cut(s) 266
AcyI GRCGYC 1 cut(s) 416
AfaI GTAC 8 cut(s) 376, 1430, 1631, 1685, 1691, 1709, 1730, 2551
AfiI CCNNNNNNNGG 9 cut(s) 269, 387, 489, 1473, 1699, 1704, 2054, 2529, 2634
AflIII ACRYGT 1 cut(s) 1893
AhlI ACTAGT 1 cut(s) 2456
AjnI CCWGG 4 cut(s) 629, 716, 1828, 1957
AleI CACNNNNGTG 1 cut(s) 1974
Alw21I GWGCWC 4 cut(s) 84, 288, 1049, 2143
Alw26I GTCTC 6 cut(s) 137, 938, 1202, 1409, 1921, 1956
AlwI GGATC 5 cut(s) 398, 872, 885, 1115, 2622
Ama87I CYCGRG 1 cut(s) 2361
Aor13HI TCCGGA 3 cut(s) 880, 1986, 2297
ApoI RAATTY 3 cut(s) 1347, 2723, 2737
ArsI GACNNNNNNTTYG 2 cut(s) 350, 382
AseI ATTAAT 1 cut(s) 1902
Asp700I GAANNNNTTC 1 cut(s) 548
AspLEI GCGC 6 cut(s) 110, 447, 2149, 2275, 2604, 2611
AspS9I GGNCC 7 cut(s) 935, 1954, 2129, 2340, 2394, 2419, 2651
AsuNHI GCTAGC 1 cut(s) 2683
AvaI CYCGRG 1 cut(s) 2361
AvaII GGWCC 3 cut(s) 935, 2129, 2419
BaeI ACNNNNGTAYC 6 cut(s) 47, 80, 1867, 1900, 2541, 2574
BalI TGGCCA 2 cut(s) 629, 1193
BamHI GGATCC 1 cut(s) 877
BanI GGYRCC 1 cut(s) 1932
BanII GRGCYC 2 cut(s) 84, 2305
BarI GAAGNNNNNNTAC 2 cut(s) 2160, 2192
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 1071
Bbv12I GWGCWC 4 cut(s) 84, 288, 1049, 2143
BccI CCATC 5 cut(s) 746, 752, 1644, 1952, 2120
BceAI ACGGC 4 cut(s) 393, 432, 2304, 2335
BcgI CGANNNNNNTGC 2 cut(s) 583, 617
BciT130I CCWGG 4 cut(s) 631, 718, 1830, 1959
BciVI GTATCC 2 cut(s) 887, 1195
BclI TGATCA 1 cut(s) 861
BcoDI GTCTC 6 cut(s) 137, 938, 1202, 1409, 1921, 1956
BcuI ACTAGT 1 cut(s) 2456
BfaI CTAG 6 cut(s) 1547, 1788, 2276, 2457, 2553, 2684
BfmI CTRYAG 2 cut(s) 115, 771
BfoI RGCGCY 1 cut(s) 448
BfuAI ACCTGC 2 cut(s) 1593, 2665
BfuI GTATCC 2 cut(s) 887, 1195
BglI GCCNNNNNGGC 2 cut(s) 2319, 2584
BlpI GCTNAGC 1 cut(s) 2574
Bme1390I CCNGG 4 cut(s) 631, 718, 1830, 1959
Bme18I GGWCC 3 cut(s) 935, 2129, 2419
BmeT110I CYCGRG 1 cut(s) 2361
BmgT120I GGNCC 7 cut(s) 935, 1954, 2129, 2340, 2394, 2419, 2651
BmiI GGNNCC 8 cut(s) 879, 974, 1934, 1956, 2131, 2296, 2302, 2395
BmrFI CCNGG 4 cut(s) 631, 718, 1830, 1959
BmrI ACTGGG 1 cut(s) 2300
BmsI GCATC 7 cut(s) 450, 570, 610, 909, 1800, 2226, 2467
BmtI GCTAGC 1 cut(s) 2687
BmuI ACTGGG 1 cut(s) 2300
BpiI GAAGAC 1 cut(s) 1071
BplI GAGNNNNNCTC 2 cut(s) 1560, 1592
Bpu10I CCTNAGC 1 cut(s) 977
Bpu1102I GCTNAGC 1 cut(s) 2574
BpuEI CTTGAG 6 cut(s) 986, 1199, 1562, 1583, 1848, 2207
BsaAI YACGTR 1 cut(s) 266
BsaBI GATNNNNATC 2 cut(s) 1106, 2216
BsaHI GRCGYC 1 cut(s) 416
BsaJI CCNNGG 6 cut(s) 1188, 1675, 1698, 1950, 1957, 2317
BsaWI WCCGGW 4 cut(s) 456, 880, 1986, 2297
BsaXI ACNNNNNCTCC 8 cut(s) 86, 116, 215, 245, 2292, 2322, 2693, 2723
Bsc4I CCNNNNNNNGG 9 cut(s) 269, 387, 489, 1473, 1699, 1704, 2054, 2529, 2634
Bse118I RCCGGY 3 cut(s) 532, 563, 1006
Bse1I ACTGG 7 cut(s) 361, 1244, 1510, 2006, 2306, 2387, 2588
Bse3DI GCAATG 2 cut(s) 2493, 2604
Bse8I GATNNNNATC 2 cut(s) 1106, 2216
BseAI TCCGGA 3 cut(s) 880, 1986, 2297
BseBI CCWGG 4 cut(s) 631, 718, 1830, 1959
BseDI CCNNGG 6 cut(s) 1188, 1675, 1698, 1950, 1957, 2317
BseGI GGATG 6 cut(s) 465, 585, 757, 828, 1731, 2217
BseJI GATNNNNATC 2 cut(s) 1106, 2216
BseLI CCNNNNNNNGG 9 cut(s) 269, 387, 489, 1473, 1699, 1704, 2054, 2529, 2634
BseMI GCAATG 2 cut(s) 2493, 2604
BseNI ACTGG 7 cut(s) 361, 1244, 1510, 2006, 2306, 2387, 2588
BseRI GAGGAG 6 cut(s) 184, 209, 683, 1045, 2060, 2270
BsgI GTGCAG 4 cut(s) 1160, 1221, 1270, 2108
Bsh1285I CGRYCG 2 cut(s) 457, 540
BshNI GGYRCC 1 cut(s) 1932
BsiEI CGRYCG 2 cut(s) 457, 540
BsiHKAI GWGCWC 4 cut(s) 84, 288, 1049, 2143
BsiHKCI CYCGRG 1 cut(s) 2361
BsiWI CGTACG 1 cut(s) 374
BslFI GGGAC 1 cut(s) 702
BslI CCNNNNNNNGG 9 cut(s) 269, 387, 489, 1473, 1699, 1704, 2054, 2529, 2634
BsmAI GTCTC 6 cut(s) 137, 938, 1202, 1409, 1921, 1956
BsmBI CGTCTC 3 cut(s) 938, 1409, 1956
BsmFI GGGAC 1 cut(s) 702
BsmI GAATGC 2 cut(s) 526, 2275
BsoBI CYCGRG 1 cut(s) 2361
Bsp1286I GDGCHC 5 cut(s) 84, 288, 1049, 2143, 2305
Bsp13I TCCGGA 3 cut(s) 880, 1986, 2297
Bsp143I GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
Bsp1720I GCTNAGC 1 cut(s) 2574
Bsp19I CCATGG 2 cut(s) 1188, 1675
BspEI TCCGGA 3 cut(s) 880, 1986, 2297
BspHI TCATGA 1 cut(s) 900
BspLI GGNNCC 8 cut(s) 879, 974, 1934, 1956, 2131, 2296, 2302, 2395
BspMI ACCTGC 2 cut(s) 1593, 2665
BspOI GCTAGC 1 cut(s) 2687
BspPI GGATC 5 cut(s) 398, 872, 885, 1115, 2622
BspQI GCTCTTC 1 cut(s) 344
BspT107I GGYRCC 1 cut(s) 1932
BsrBI CCGCTC 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 2493, 2604
BsrFI RCCGGY 3 cut(s) 532, 563, 1006
BsrI ACTGG 7 cut(s) 361, 1244, 1510, 2006, 2306, 2387, 2588
BssAI RCCGGY 3 cut(s) 532, 563, 1006
BssECI CCNNGG 6 cut(s) 1188, 1675, 1698, 1950, 1957, 2317
BssMI GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
BssNI GRCGYC 1 cut(s) 416
BssT1I CCWWGG 3 cut(s) 1188, 1675, 1698
Bst2UI CCWGG 4 cut(s) 631, 718, 1830, 1959
Bst4CI ACNGT 9 cut(s) 301, 335, 615, 772, 949, 1098, 1421, 2023, 2084
Bst6I CTCTTC 7 cut(s) 344, 771, 864, 1272, 1561, 1649, 2054
BstACI GRCGYC 1 cut(s) 416
BstAPI GCANNNNNTGC 1 cut(s) 2486
BstBAI YACGTR 1 cut(s) 266
BstC8I GCNNGC 6 cut(s) 84, 112, 414, 534, 2651, 2685
BstDSI CCRYGG 3 cut(s) 1188, 1675, 2317
BstEII GGTNACC 1 cut(s) 205
BstENI CCTNNNNNAGG 1 cut(s) 1697
BstF5I GGATG 6 cut(s) 465, 585, 757, 828, 1731, 2217
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 6 cut(s) 110, 447, 2149, 2275, 2604, 2611
BstKTI GATC 8 cut(s) 25, 393, 660, 864, 880, 1110, 1787, 2617
BstMAI GTCTC 6 cut(s) 137, 938, 1202, 1409, 1921, 1956
BstMBI GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
BstMCI CGRYCG 2 cut(s) 457, 540
BstNI CCWGG 4 cut(s) 631, 718, 1830, 1959
BstNSI RCATGY 1 cut(s) 1897
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 4 cut(s) 629, 716, 1828, 1957
BstSFI CTRYAG 2 cut(s) 115, 771
BstV2I GAAGAC 1 cut(s) 1071
BstX2I RGATCY 1 cut(s) 877
BstXI CCANNNNNNTGG 1 cut(s) 1929
BstYI RGATCY 1 cut(s) 877
BsuI GTATCC 2 cut(s) 887, 1195
BtgI CCRYGG 3 cut(s) 1188, 1675, 2317
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 6 cut(s) 465, 585, 757, 828, 1731, 2217
BtsI GCAGTG 1 cut(s) 589
BveI ACCTGC 2 cut(s) 1593, 2665
Cac8I GCNNGC 6 cut(s) 84, 112, 414, 534, 2651, 2685
CciI TCATGA 1 cut(s) 900
CfoI GCGC 6 cut(s) 110, 447, 2149, 2275, 2604, 2611
Cfr10I RCCGGY 3 cut(s) 532, 563, 1006
Cfr13I GGNCC 7 cut(s) 935, 1954, 2129, 2340, 2394, 2419, 2651
CseI GACGC 3 cut(s) 238, 405, 2014
Csp6I GTAC 8 cut(s) 375, 1429, 1630, 1684, 1690, 1708, 1729, 2550
CspCI CAANNNNNGTGG 4 cut(s) 2432, 2467, 2701, 2736
CviQI GTAC 8 cut(s) 375, 1429, 1630, 1684, 1690, 1708, 1729, 2550
DpnI GATC 8 cut(s) 24, 392, 659, 863, 879, 1109, 1786, 2616
DpnII GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
DrdI GACNNNNNNGTC 1 cut(s) 233
DseDI GACNNNNNNGTC 1 cut(s) 233
EaeI YGGCCR 3 cut(s) 530, 627, 1191
Eam1104I CTCTTC 7 cut(s) 344, 771, 864, 1272, 1561, 1649, 2054
EarI CTCTTC 7 cut(s) 344, 771, 864, 1272, 1561, 1649, 2054
EciI GGCGGA 2 cut(s) 31, 2426
Ecl136II GAGCTC 1 cut(s) 82
Eco130I CCWWGG 3 cut(s) 1188, 1675, 1698
Eco24I GRGCYC 2 cut(s) 84, 2305
Eco47I GGWCC 3 cut(s) 935, 2129, 2419
Eco53kI GAGCTC 1 cut(s) 82
Eco57I CTGAAG 6 cut(s) 425, 707, 784, 1855, 2489, 2688
Eco72I CACGTG 1 cut(s) 266
Eco88I CYCGRG 1 cut(s) 2361
Eco91I GGTNACC 1 cut(s) 205
EcoICRI GAGCTC 1 cut(s) 82
EcoNI CCTNNNNNAGG 1 cut(s) 1697
EcoO109I RGGNCCY 1 cut(s) 2340
EcoO65I GGTNACC 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 2723
EcoRII CCWGG 4 cut(s) 629, 716, 1828, 1957
EcoT14I CCWWGG 3 cut(s) 1188, 1675, 1698
EcoT38I GRGCYC 2 cut(s) 84, 2305
ErhI CCWWGG 3 cut(s) 1188, 1675, 1698
Esp3I CGTCTC 3 cut(s) 938, 1409, 1956
FaqI GGGAC 1 cut(s) 702
FauI CCCGC 1 cut(s) 2642
FauNDI CATATG 1 cut(s) 1851
FbaI TGATCA 1 cut(s) 861
FblI GTMKAC 2 cut(s) 303, 2595
FokI GGATG 6 cut(s) 472, 592, 764, 815, 1738, 2204
FriOI GRGCYC 2 cut(s) 84, 2305
FspBI CTAG 6 cut(s) 1547, 1788, 2276, 2457, 2553, 2684
GlaI GCGC 6 cut(s) 109, 446, 2148, 2274, 2603, 2610
HaeII RGCGCY 1 cut(s) 448
HgaI GACGC 3 cut(s) 238, 405, 2014
HhaI GCGC 6 cut(s) 110, 447, 2149, 2275, 2604, 2611
Hin1I GRCGYC 1 cut(s) 416
Hin6I GCGC 6 cut(s) 108, 445, 2147, 2273, 2602, 2609
HinP1I GCGC 6 cut(s) 108, 445, 2147, 2273, 2602, 2609
HincII GTYRAC 2 cut(s) 304, 745
HindII GTYRAC 2 cut(s) 304, 745
HinfI GANTC 8 cut(s) 230, 308, 653, 765, 1990, 2067, 2261, 2359
Hpy166II GTNNAC 5 cut(s) 304, 745, 2066, 2236, 2596
Hpy8I GTNNAC 5 cut(s) 304, 745, 2066, 2236, 2596
Hpy99I CGWCG 5 cut(s) 227, 230, 239, 308, 421
HpyAV CCTTC 8 cut(s) 391, 481, 670, 1473, 1490, 1549, 2061, 2465
HpyCH4III ACNGT 9 cut(s) 301, 335, 615, 772, 949, 1098, 1421, 2023, 2084
HpyCH4IV ACGT 3 cut(s) 198, 265, 2482
HpySE526I ACGT 3 cut(s) 198, 265, 2482
Hsp92I GRCGYC 1 cut(s) 416
HspAI GCGC 6 cut(s) 108, 445, 2147, 2273, 2602, 2609
Kpn2I TCCGGA 3 cut(s) 880, 1986, 2297
KroI GCCGGC 1 cut(s) 532
KroNI GCCGGC 1 cut(s) 534
Ksp22I TGATCA 1 cut(s) 861
Kzo9I GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
LguI GCTCTTC 1 cut(s) 344
LweI GCATC 7 cut(s) 450, 570, 610, 909, 1800, 2226, 2467
MaeI CTAG 6 cut(s) 1547, 1788, 2276, 2457, 2553, 2684
MaeII ACGT 3 cut(s) 198, 265, 2482
MaeIII GTNAC 7 cut(s) 205, 1421, 1501, 2175, 2356, 2508, 2562
MalI GATC 8 cut(s) 24, 392, 659, 863, 879, 1109, 1786, 2616
MbiI CCGCTC 1 cut(s) 127
MboI GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
MfeI CAATTG 1 cut(s) 1069
MflI RGATCY 1 cut(s) 877
MhlI GDGCHC 5 cut(s) 84, 288, 1049, 2143, 2305
MlsI TGGCCA 2 cut(s) 629, 1193
MluNI TGGCCA 2 cut(s) 629, 1193
MlyI GAGTC 6 cut(s) 224, 302, 647, 1984, 2061, 2353
MmeI TCCRAC 2 cut(s) 855, 1491
Mox20I TGGCCA 2 cut(s) 629, 1193
MroI TCCGGA 3 cut(s) 880, 1986, 2297
MroNI GCCGGC 1 cut(s) 532
MroXI GAANNNNTTC 1 cut(s) 548
MscI TGGCCA 2 cut(s) 629, 1193
MseI TTAA 7 cut(s) 783, 1410, 1803, 1812, 1902, 2016, 2102
MslI CAYNNNNRTG 5 cut(s) 1514, 1927, 1974, 2498, 2622
Msp20I TGGCCA 2 cut(s) 629, 1193
MspA1I CMGCKG 2 cut(s) 138, 1205
MspR9I CCNGG 4 cut(s) 631, 718, 1830, 1959
MunI CAATTG 1 cut(s) 1069
Mva1269I GAATGC 2 cut(s) 526, 2275
MvaI CCWGG 4 cut(s) 631, 718, 1830, 1959
NaeI GCCGGC 1 cut(s) 534
NcoI CCATGG 2 cut(s) 1188, 1675
NdeI CATATG 1 cut(s) 1851
NdeII GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
NgoMIV GCCGGC 1 cut(s) 532
NheI GCTAGC 1 cut(s) 2683
NlaIV GGNNCC 8 cut(s) 879, 974, 1934, 1956, 2131, 2296, 2302, 2395
NmeAIII GCCGAG 3 cut(s) 303, 370, 1931
NmuCI GTSAC 5 cut(s) 205, 1421, 2356, 2508, 2562
NspI RCATGY 1 cut(s) 1897
OliI CACNNNNGTG 1 cut(s) 1974
PaeR7I CTCGAG 1 cut(s) 2361
PagI TCATGA 1 cut(s) 900
PaqCI CACCTGC 1 cut(s) 2665
PciI ACATGT 1 cut(s) 1893
PciSI GCTCTTC 1 cut(s) 344
PcsI WCGNNNNNNNCGW 3 cut(s) 219, 231, 1780
PctI GAATGC 2 cut(s) 526, 2275
PdiI GCCGGC 1 cut(s) 534
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 2 cut(s) 765, 2261
Pfl23II CGTACG 1 cut(s) 374
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 2 cut(s) 1473, 1704
PfoI TCCNGGA 1 cut(s) 1828
PleI GAGTC 6 cut(s) 224, 302, 647, 1984, 2061, 2353
PmaCI CACGTG 1 cut(s) 266
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 6 cut(s) 224, 302, 647, 1984, 2061, 2353
Ppu21I YACGTR 1 cut(s) 266
PscI ACATGT 1 cut(s) 1893
PshBI ATTAAT 1 cut(s) 1902
PsiI TTATAA 1 cut(s) 1514
Psp124BI GAGCTC 1 cut(s) 84
Psp6I CCWGG 4 cut(s) 629, 716, 1828, 1957
PspCI CACGTG 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 205
PspGI CCWGG 4 cut(s) 629, 716, 1828, 1957
PspLI CGTACG 1 cut(s) 374
PspN4I GGNNCC 8 cut(s) 879, 974, 1934, 1956, 2131, 2296, 2302, 2395
PspPI GGNCC 7 cut(s) 935, 1954, 2129, 2340, 2394, 2419, 2651
PsuI RGATCY 1 cut(s) 877
PsyI GACNNNGTC 1 cut(s) 233
PvuII CAGCTG 1 cut(s) 1205
RsaI GTAC 8 cut(s) 376, 1430, 1631, 1685, 1691, 1709, 1730, 2551
RsaNI GTAC 8 cut(s) 375, 1429, 1630, 1684, 1690, 1708, 1729, 2550
RseI CAYNNNNRTG 5 cut(s) 1514, 1927, 1974, 2498, 2622
SacI GAGCTC 1 cut(s) 84
SalI GTCGAC 1 cut(s) 302
SapI GCTCTTC 1 cut(s) 344
SaqAI TTAA 7 cut(s) 783, 1410, 1803, 1812, 1902, 2016, 2102
Sau3AI GATC 8 cut(s) 22, 390, 657, 861, 877, 1107, 1784, 2614
Sau96I GGNCC 7 cut(s) 935, 1954, 2129, 2340, 2394, 2419, 2651
SchI GAGTC 6 cut(s) 224, 302, 647, 1984, 2061, 2353
ScrFI CCNGG 4 cut(s) 631, 718, 1830, 1959
SduI GDGCHC 5 cut(s) 84, 288, 1049, 2143, 2305
SfaNI GCATC 7 cut(s) 450, 570, 610, 909, 1800, 2226, 2467
SfcI CTRYAG 2 cut(s) 115, 771
Sfr274I CTCGAG 1 cut(s) 2361
SinI GGWCC 3 cut(s) 935, 2129, 2419
SlaI CTCGAG 1 cut(s) 2361
SmiMI CAYNNNNRTG 5 cut(s) 1514, 1927, 1974, 2498, 2622
SmlI CTYRAG 7 cut(s) 1001, 1214, 1577, 1598, 1863, 2222, 2361
SmoI CTYRAG 7 cut(s) 1001, 1214, 1577, 1598, 1863, 2222, 2361
SpeI ACTAGT 1 cut(s) 2456
SspMI CTAG 6 cut(s) 1547, 1788, 2276, 2457, 2553, 2684
SstI GAGCTC 1 cut(s) 84
StyD4I CCNGG 4 cut(s) 629, 716, 1828, 1957
StyI CCWWGG 3 cut(s) 1188, 1675, 1698
TaaI ACNGT 9 cut(s) 301, 335, 615, 772, 949, 1098, 1421, 2023, 2084
TaiI ACGT 3 cut(s) 201, 268, 2485
TatI WGTACW 1 cut(s) 1728
TauI GCSGC 5 cut(s) 273, 330, 436, 473, 2286
TfiI GAWTC 2 cut(s) 765, 2261
Tru1I TTAA 7 cut(s) 783, 1410, 1803, 1812, 1902, 2016, 2102
Tru9I TTAA 7 cut(s) 783, 1410, 1803, 1812, 1902, 2016, 2102
TseFI GTSAC 5 cut(s) 205, 1421, 2356, 2508, 2562
Tsp45I GTSAC 5 cut(s) 205, 1421, 2356, 2508, 2562
TspDTI ATGAA 7 cut(s) 17, 490, 861, 1454, 1838, 1970, 2414
TspGWI ACGGA 5 cut(s) 223, 362, 403, 527, 1770
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 2 cut(s) 1473, 1704
VpaK11BI GGWCC 3 cut(s) 935, 2129, 2419
VspI ATTAAT 1 cut(s) 1902
XagI CCTNNNNNAGG 1 cut(s) 1697
XapI RAATTY 3 cut(s) 1347, 2723, 2737
XceI RCATGY 1 cut(s) 1897
XcmI CCANNNNNNNNNTGG 1 cut(s) 2404
XhoI CTCGAG 1 cut(s) 2361
XmiI GTMKAC 2 cut(s) 303, 2595
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 6 cut(s) 1547, 1788, 2276, 2457, 2553, 2684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.