Rw7G017430

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004577
Physical Location & Seq
Forward (+)
18210048 .. 18214964
4917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G017430.1

Sequence Viewer

Length: 2265 bp
ATGCATTCGGCGGCTGCTCCGGCTCTAAAAGGGCTTAAGTTCATAAGCAAGAATGCGGAGTGGCCGGCGGTGGAGAAAAACTTCGACAAGCTCACCGCCTCGACCAACGGGATGCTGCCACAATCCAAGGAGTTCGCCGGACTACTGTTCGATGCTTTGGCCAGGAAGCATGGCATCAAAGGCGACCCGATCAACAAGGGGGAGTTGAGGGAGATGTGGGTACAAGTTTCTAAGCAGGACTTCGATTCCAGTCTTCAAATTTTCTTTGACATGGTTGATAAGGATGGGGATGGAAGAATCAGTGTAGAAGATGTTAAGGAGATGGTTAGCTTCAGTGCTTCTGTCAACAAATTATCGAAAATCCAGGCACAAGCAGATGAATATGCAGCATTGATCATGGAAGAGTTGGATCCAGACAATCTTGGATACATCACGACAGAAAGTTTGGAGACGCTCCTACTGTATGGACCGCAGGAGACAGTGGTGCGAGGAAAGGAGAGCCAGAACCTGAATAAAATGCTGAGCCAGAAGCTGAAGCCGGTAAGGGAGGACAACCCTCTGAGGAGGTGGTATAGGAGGACTAACTACTTTCTTGAAGACAATTGGCAGAGAGTTTGGGTAATGGCACTGTGGATTGGGATCATGGCTGGTCTATTTGCCTATAAGTATGTGCAGTATAAAGACGGGCCTGCATATCAAGTAATGGGTCATTGTGTATCCATGGCCAAAGGTGCAGCTGAGACACTCAAGTTCAACATGGCTCTTATTCTACTTCCTTTGTGCAGAAACACTATCACTCTTCTGAGGAACAAGACCAAATTGGGTGTTGCTATTCCTTTTGATGACAACCTCAATTTCCACAAGGTGATAGCTATTGGAATTTCAGTAGGGGTTGGCATACACTCAATTTACCATTTGGCCTGTGATTTCCCTCGTCTCATTAAAGCAGACAGTGACAAGTACGCCCTAATGAAGCAATTTTTTGGGGAACAACCTTCGAACTATTGGTTTTTTCTGAAATCAGTGGAAGGAGTAACTGGCATTATAATGGTAGTGTTGATGACAATAGCCTTAACACTGTCAGCACCATGTTTTAGAAGAGGTAGGTTCTACCGCCTCAGGAGGCTCACTGGCCCTAGAGCCTTTTTCTACTCCCATCAACTCTTTATCATTGTCTATACCTTGCTCATTGTCCATGGAGAGTACCTGTACCTCACCAAGGAATGGTACAAGAAAACGACTTGGATGTACTTGGCTATTCCGCTTCTCCTTTACGGAGGTGAAAGATTGGTTCAGGTGCTTCGATCTATCAAGCCTGTTAAGATAGTAAAGGTGGTTGTATATCCTGGAAATGTGTTAGCACTTCATATGTCAAAGCCTCAAGGATTCAGATACCATAGTGGGCAATACATGTTTATTAATTGTGCTGCTGTCTCCTCATTTGAATGGCACCCATTTTACATCACCTCGGCCCCAGGAGACGACCACCTCAGTGTTCATATCCGGACTCTTGGCAAATGGACGCAACAAATTAAAACAGTATTTTCACAGATATGCCAACCACCTCCTTCTGGGAAGAGCGGACTCCTCAGAGCCGACTGTATGCAAGGCAGCAACTTAAACAAATTTCCAAGAGTGCTAATAGATGGACCCTATGGAGCACCACCTCAAGACTACAAGAAATATGAAGTGGTGTTACTTATAGCGTTGGGAATAGGAGTAACCCCAATGATAAGCATCCTCAAGGACATAGTGAACAACATCAAAGCCATAGAGGAGGAATCAGAGAATGCCCTAGAAAGCGGCACGGCTGGTTCCGGCAGCCCAGTGAGCCTCAACAGCAACTTCAAGACCAAGAGGGCCTACTTCTACTGGGTGACCCGAGAGCAAGGTTCGTTCGACTGGTTCAAAGGGGCCATGAACAAGGTGGCGGAGCTGGACCATAACAGAGTGATAGAGTTGCACAACTATTGTACTAGTGTTTATGAGGAAGGTGATGCACGTTCTGCTCTCATTGCTATGCTTCAGTCACTCAATCATGCCAAGAATGGGGTTGATATTTTGTCGGGTACTAGGGTGAAGTCGCATTTTGCTAAGCCCAACTGGCGTGAGGTCTACAAGCGCATTGCACTGGATCACACCAATGCCAAAGTTGGGGTGTTCTACTGCGGGGCACCCGTTCTAACTGAAGAACTACGACAGCTAGCTCTGGATTTCAACCACAGAACCTCCACCAGATTTGAATTCCATAAAGAAAATTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

754

Amino Acids

85.59

Weight (kDa)

9.18

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 2 - 83 5e-18 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 83 - 145 1.9e-06 EF-hand domain pair
Ferric_reduct PF01794 253 - 396 3.6e-11 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 439 - 555 1e-33 FAD-binding domain
NAD_binding_6 PF08030 562 - 736 3.8e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1046
AccB1I GGYRCC 2 cut(s) 1449, 2173
AccB7I CCANNNNNTGG 1 cut(s) 1224
AccBSI CCGCTC 1 cut(s) 1581
AccI GTMKAC 1 cut(s) 2115
AccIII TCCGGA 1 cut(s) 1503
AclWI GGATC 4 cut(s) 404, 417, 647, 2142
AcoI YGGCCR 3 cut(s) 62, 159, 723
AcsI RAATTY 5 cut(s) 258, 879, 1625, 2243, 2257
AcuI CTGAAG 4 cut(s) 316, 554, 2009, 2208
AdeI CACNNNGTG 1 cut(s) 865
AfaI GTAC 8 cut(s) 222, 962, 1205, 1211, 1229, 1250, 1975, 2071
AfiI CCNNNNNNNGG 5 cut(s) 1219, 1224, 1571, 2049, 2154
AflII CTTAAG 1 cut(s) 35
AflIII ACRYGT 1 cut(s) 1410
AgsI TTSAA 8 cut(s) 257, 596, 754, 1445, 1849, 1909, 2218, 2243
AhlI ACTAGT 1 cut(s) 1976
AjnI CCWGG 4 cut(s) 161, 363, 1345, 1474
AleI CACNNNNGTG 1 cut(s) 1491
AluBI AGCT 8 cut(s) 91, 330, 532, 737, 872, 1936, 2203, 2207
AluI AGCT 8 cut(s) 91, 330, 532, 737, 872, 1936, 2203, 2207
Alw21I GWGCWC 1 cut(s) 1663
Alw26I GTCTC 6 cut(s) 443, 470, 734, 941, 1438, 1473
AlwI GGATC 4 cut(s) 404, 417, 647, 2142
AlwNI CAGNNNCTG 2 cut(s) 508, 532
Ama87I CYCGRG 1 cut(s) 1881
Aor13HI TCCGGA 1 cut(s) 1503
AoxI GGCC 9 cut(s) 62, 159, 686, 723, 918, 1132, 1470, 1860, 1914
ApeKI GCWGC 7 cut(s) 14, 115, 386, 734, 1427, 1611, 1821
ApoI RAATTY 5 cut(s) 258, 879, 1625, 2243, 2257
ArsI GACNNNNNNTTYG 2 cut(s) 427, 459
AseI ATTAAT 1 cut(s) 1419
Asp700I GAANNNNTTC 1 cut(s) 80
AspLEI GCGC 1 cut(s) 2124
AspS9I GGNCC 8 cut(s) 467, 686, 1133, 1471, 1649, 1860, 1914, 1939
AsuHPI GGTGA 8 cut(s) 85, 877, 1207, 1292, 1456, 1888, 2006, 2089
AsuII TTCGAA 1 cut(s) 998
AsuNHI GCTAGC 1 cut(s) 2203
AvaI CYCGRG 1 cut(s) 1881
AvaII GGWCC 3 cut(s) 467, 1649, 1939
AxyI CCTNAGG 1 cut(s) 1118
BaeGI GKGCMC 1 cut(s) 2176
BaeI ACNNNNGTAYC 4 cut(s) 1384, 1417, 2061, 2094
BalI TGGCCA 2 cut(s) 161, 725
BamHI GGATCC 1 cut(s) 409
BanI GGYRCC 2 cut(s) 1449, 2173
BarI GAAGNNNNNNTAC 2 cut(s) 1680, 1712
BbsI GAAGAC 2 cut(s) 245, 603
Bbv12I GWGCWC 1 cut(s) 1663
BbvI GCAGC 6 cut(s) 102, 398, 746, 1414, 1623, 1833
BccI CCATC 5 cut(s) 278, 284, 316, 1164, 1640
BceAI ACGGC 1 cut(s) 1824
BciT130I CCWGG 4 cut(s) 163, 365, 1347, 1476
BciVI GTATCC 2 cut(s) 419, 727
BclI TGATCA 1 cut(s) 393
BcoDI GTCTC 6 cut(s) 443, 470, 734, 941, 1438, 1473
BcuI ACTAGT 1 cut(s) 1976
BfaI CTAG 5 cut(s) 1137, 1796, 1977, 2073, 2204
BfrI CTTAAG 1 cut(s) 35
BfuI GTATCC 2 cut(s) 419, 727
BglI GCCNNNNNGGC 1 cut(s) 2104
BisI GCNGC 9 cut(s) 12, 15, 116, 387, 735, 1428, 1612, 1804, 1822
BlpI GCTNAGC 2 cut(s) 521, 2094
BlsI GCNGC 9 cut(s) 13, 16, 117, 388, 736, 1429, 1613, 1805, 1823
Bme1390I CCNGG 4 cut(s) 163, 365, 1347, 1476
Bme18I GGWCC 3 cut(s) 467, 1649, 1939
BmeT110I CYCGRG 1 cut(s) 1881
BmgT120I GGNCC 8 cut(s) 467, 686, 1133, 1471, 1649, 1860, 1914, 1939
BmiI GGNNCC 7 cut(s) 411, 1451, 1473, 1651, 1816, 1915, 2175
BmrFI CCNGG 4 cut(s) 163, 365, 1347, 1476
BmrI ACTGGG 2 cut(s) 1820, 1882
BmsI GCATC 5 cut(s) 102, 142, 183, 1746, 1987
BmtI GCTAGC 1 cut(s) 2207
BmuI ACTGGG 2 cut(s) 1820, 1882
BpiI GAAGAC 2 cut(s) 245, 603
Bpu1102I GCTNAGC 2 cut(s) 521, 2094
Bpu14I TTCGAA 1 cut(s) 998
BpuEI CTTGAG 4 cut(s) 731, 1365, 1653, 1727
BsaBI GATNNNNATC 2 cut(s) 638, 1736
BsaJI CCNNGG 6 cut(s) 126, 720, 1195, 1218, 1467, 1474
BsaWI WCCGGW 1 cut(s) 1503
BsaXI ACNNNNNCTCC 2 cut(s) 2213, 2243
Bsc4I CCNNNNNNNGG 5 cut(s) 1219, 1224, 1571, 2049, 2154
Bse118I RCCGGY 2 cut(s) 64, 538
Bse1I ACTGG 8 cut(s) 249, 1042, 1135, 1826, 1877, 1907, 2108, 2136
Bse21I CCTNAGG 1 cut(s) 1118
Bse3DI GCAATG 2 cut(s) 2013, 2124
Bse8I GATNNNNATC 2 cut(s) 638, 1736
BseAI TCCGGA 1 cut(s) 1503
BseBI CCWGG 4 cut(s) 163, 365, 1347, 1476
BseDI CCNNGG 6 cut(s) 126, 720, 1195, 1218, 1467, 1474
BseGI GGATG 5 cut(s) 117, 289, 295, 1251, 1737
BseJI GATNNNNATC 2 cut(s) 638, 1736
BseLI CCNNNNNNNGG 5 cut(s) 1219, 1224, 1571, 2049, 2154
BseMI GCAATG 2 cut(s) 2013, 2124
BseMII CTCAG 7 cut(s) 512, 551, 729, 794, 1132, 1504, 1603
BseNI ACTGG 8 cut(s) 249, 1042, 1135, 1826, 1877, 1907, 2108, 2136
BseRI GAGGAG 4 cut(s) 577, 1426, 1577, 1790
BseSI GKGCMC 1 cut(s) 2176
BseXI GCAGC 6 cut(s) 102, 398, 746, 1414, 1623, 1833
BsgI GTGCAG 3 cut(s) 692, 753, 802
BshFI GGCC 9 cut(s) 64, 161, 688, 725, 920, 1134, 1472, 1862, 1916
BshNI GGYRCC 2 cut(s) 1449, 2173
BsiHKAI GWGCWC 1 cut(s) 1663
BsiHKCI CYCGRG 1 cut(s) 1881
BsiSI CCGG 6 cut(s) 20, 65, 138, 539, 1504, 1818
BslI CCNNNNNNNGG 5 cut(s) 1219, 1224, 1571, 2049, 2154
BsmAI GTCTC 6 cut(s) 443, 470, 734, 941, 1438, 1473
BsmBI CGTCTC 3 cut(s) 443, 941, 1473
BsmI GAATGC 3 cut(s) 4, 58, 1795
BsnI GGCC 9 cut(s) 64, 161, 688, 725, 920, 1134, 1472, 1862, 1916
BsoBI CYCGRG 1 cut(s) 1881
Bsp119I TTCGAA 1 cut(s) 998
Bsp1286I GDGCHC 2 cut(s) 1663, 2176
Bsp13I TCCGGA 1 cut(s) 1503
Bsp143I GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
Bsp1720I GCTNAGC 2 cut(s) 521, 2094
Bsp19I CCATGG 2 cut(s) 720, 1195
BspANI GGCC 9 cut(s) 64, 161, 688, 725, 920, 1134, 1472, 1862, 1916
BspCNI CTCAG 7 cut(s) 513, 552, 730, 795, 1131, 1503, 1602
BspEI TCCGGA 1 cut(s) 1503
BspLI GGNNCC 7 cut(s) 411, 1451, 1473, 1651, 1816, 1915, 2175
BspOI GCTAGC 1 cut(s) 2207
BspPI GGATC 4 cut(s) 404, 417, 647, 2142
BspQI GCTCTTC 1 cut(s) 1571
BspT104I TTCGAA 1 cut(s) 998
BspT107I GGYRCC 2 cut(s) 1449, 2173
BspTI CTTAAG 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 1581
BsrDI GCAATG 2 cut(s) 2013, 2124
BsrFI RCCGGY 2 cut(s) 64, 538
BsrI ACTGG 8 cut(s) 249, 1042, 1135, 1826, 1877, 1907, 2108, 2136
BssAI RCCGGY 2 cut(s) 64, 538
BssECI CCNNGG 6 cut(s) 126, 720, 1195, 1218, 1467, 1474
BssMI GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
BssT1I CCWWGG 4 cut(s) 126, 720, 1195, 1218
Bst2UI CCWGG 4 cut(s) 163, 365, 1347, 1476
Bst4CI ACNGT 8 cut(s) 147, 462, 481, 630, 953, 1080, 1540, 1601
Bst6I CTCTTC 4 cut(s) 396, 804, 1093, 1571
BstAFI CTTAAG 1 cut(s) 35
BstAPI GCANNNNNTGC 1 cut(s) 2006
BstBI TTCGAA 1 cut(s) 998
BstC8I GCNNGC 3 cut(s) 66, 690, 2205
BstDEI CTNAG 9 cut(s) 231, 521, 560, 738, 803, 1118, 1490, 1589, 2094
BstDSI CCRYGG 2 cut(s) 720, 1195
BstEII GGTNACC 1 cut(s) 1876
BstENI CCTNNNNNAGG 1 cut(s) 1217
BstF5I GGATG 5 cut(s) 117, 289, 295, 1251, 1737
BstHHI GCGC 1 cut(s) 2124
BstKTI GATC 6 cut(s) 192, 396, 412, 642, 1307, 2137
BstMAI GTCTC 6 cut(s) 443, 470, 734, 941, 1438, 1473
BstMBI GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
BstMWI GCNNNNNNNGC 8 cut(s) 20, 180, 731, 1830, 1839, 2006, 2015, 2104
BstNI CCWGG 4 cut(s) 163, 365, 1347, 1476
BstNSI RCATGY 1 cut(s) 1414
BstPI GGTNACC 1 cut(s) 1876
BstSCI CCNGG 4 cut(s) 161, 363, 1345, 1474
BstSLI GKGCMC 1 cut(s) 2176
BstV1I GCAGC 6 cut(s) 102, 398, 746, 1414, 1623, 1833
BstV2I GAAGAC 2 cut(s) 245, 603
BstX2I RGATCY 1 cut(s) 409
BstYI RGATCY 1 cut(s) 409
Bsu36I CCTNAGG 1 cut(s) 1118
BsuI GTATCC 2 cut(s) 419, 727
BsuRI GGCC 9 cut(s) 64, 161, 688, 725, 920, 1134, 1472, 1862, 1916
BtgI CCRYGG 2 cut(s) 720, 1195
BtsCI GGATG 5 cut(s) 117, 289, 295, 1251, 1737
Cac8I GCNNGC 3 cut(s) 66, 690, 2205
CaiI CAGNNNCTG 2 cut(s) 508, 532
CfoI GCGC 1 cut(s) 2124
Cfr10I RCCGGY 2 cut(s) 64, 538
Cfr13I GGNCC 8 cut(s) 467, 686, 1133, 1471, 1649, 1860, 1914, 1939
CseI GACGC 2 cut(s) 460, 1531
Csp6I GTAC 8 cut(s) 221, 961, 1204, 1210, 1228, 1249, 1974, 2070
CspCI CAANNNNNGTGG 2 cut(s) 2221, 2256
CviQI GTAC 8 cut(s) 221, 961, 1204, 1210, 1228, 1249, 1974, 2070
DdeI CTNAG 9 cut(s) 231, 521, 560, 738, 803, 1118, 1490, 1589, 2094
DpnI GATC 6 cut(s) 191, 395, 411, 641, 1306, 2136
DpnII GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
DraIII CACNNNGTG 1 cut(s) 865
EaeI YGGCCR 3 cut(s) 62, 159, 723
Eam1104I CTCTTC 4 cut(s) 396, 804, 1093, 1571
EarI CTCTTC 4 cut(s) 396, 804, 1093, 1571
EciI GGCGGA 1 cut(s) 1946
Eco130I CCWWGG 4 cut(s) 126, 720, 1195, 1218
Eco47I GGWCC 3 cut(s) 467, 1649, 1939
Eco57I CTGAAG 4 cut(s) 316, 554, 2009, 2208
Eco81I CCTNAGG 1 cut(s) 1118
Eco88I CYCGRG 1 cut(s) 1881
Eco91I GGTNACC 1 cut(s) 1876
EcoNI CCTNNNNNAGG 1 cut(s) 1217
EcoO109I RGGNCCY 1 cut(s) 1860
EcoO65I GGTNACC 1 cut(s) 1876
EcoRI GAATTC 1 cut(s) 2243
EcoRII CCWGG 4 cut(s) 161, 363, 1345, 1474
EcoT14I CCWWGG 4 cut(s) 126, 720, 1195, 1218
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 4 cut(s) 126, 720, 1195, 1218
Esp3I CGTCTC 3 cut(s) 443, 941, 1473
FalI AAGNNNNNCTT 2 cut(s) 224, 256
FauI CCCGC 1 cut(s) 2162
FauNDI CATATG 1 cut(s) 1368
FbaI TGATCA 1 cut(s) 393
FblI GTMKAC 1 cut(s) 2115
Fnu4HI GCNGC 9 cut(s) 12, 15, 116, 387, 735, 1428, 1612, 1804, 1822
FokI GGATG 5 cut(s) 124, 296, 302, 1258, 1724
Fsp4HI GCNGC 9 cut(s) 12, 15, 116, 387, 735, 1428, 1612, 1804, 1822
FspBI CTAG 5 cut(s) 1137, 1796, 1977, 2073, 2204
GlaI GCGC 1 cut(s) 2123
GluI GCNGC 9 cut(s) 12, 15, 116, 387, 735, 1428, 1612, 1804, 1822
HaeIII GGCC 9 cut(s) 64, 161, 688, 725, 920, 1134, 1472, 1862, 1916
HapII CCGG 6 cut(s) 20, 65, 138, 539, 1504, 1818
HgaI GACGC 2 cut(s) 460, 1531
HhaI GCGC 1 cut(s) 2124
Hin6I GCGC 1 cut(s) 2122
HinP1I GCGC 1 cut(s) 2122
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HinfI GANTC 6 cut(s) 245, 297, 1386, 1507, 1584, 1781
HpaII CCGG 6 cut(s) 20, 65, 138, 539, 1504, 1818
HphI GGTGA 8 cut(s) 85, 877, 1207, 1292, 1456, 1888, 2006, 2089
Hpy166II GTNNAC 3 cut(s) 346, 1756, 2116
Hpy188I TCNGA 6 cut(s) 561, 804, 1017, 1391, 1592, 1786
Hpy188III TCNNGA 8 cut(s) 413, 433, 593, 1120, 1504, 1670, 1849, 2210
Hpy8I GTNNAC 3 cut(s) 346, 1756, 2116
HpyAV CCTTC 4 cut(s) 1005, 1022, 1578, 1985
HpyCH4III ACNGT 8 cut(s) 147, 462, 481, 630, 953, 1080, 1540, 1601
HpyCH4IV ACGT 1 cut(s) 2002
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 180, 731, 1830, 1839, 2006, 2015, 2104
HpyF3I CTNAG 9 cut(s) 231, 521, 560, 738, 803, 1118, 1490, 1589, 2094
HpySE526I ACGT 1 cut(s) 2002
HspAI GCGC 1 cut(s) 2122
Kpn2I TCCGGA 1 cut(s) 1503
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
LguI GCTCTTC 1 cut(s) 1571
LmnI GCTCC 4 cut(s) 22, 459, 1658, 1933
Lsp1109I GCAGC 6 cut(s) 102, 398, 746, 1414, 1623, 1833
LweI GCATC 5 cut(s) 102, 142, 183, 1746, 1987
MaeI CTAG 5 cut(s) 1137, 1796, 1977, 2073, 2204
MaeII ACGT 1 cut(s) 2002
MaeIII GTNAC 6 cut(s) 953, 1033, 1695, 1720, 1876, 2028
MalI GATC 6 cut(s) 191, 395, 411, 641, 1306, 2136
MbiI CCGCTC 1 cut(s) 1581
MboI GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
MboII GAAGA 9 cut(s) 245, 306, 320, 413, 608, 791, 1110, 1588, 2201
MfeI CAATTG 1 cut(s) 601
MflI RGATCY 1 cut(s) 409
MhlI GDGCHC 2 cut(s) 1663, 2176
MlsI TGGCCA 2 cut(s) 161, 725
MluNI TGGCCA 2 cut(s) 161, 725
MlyI GAGTC 2 cut(s) 1501, 1578
MmeI TCCRAC 1 cut(s) 387
Mox20I TGGCCA 2 cut(s) 161, 725
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1503
MroNI GCCGGC 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 80
MscI TGGCCA 2 cut(s) 161, 725
MseI TTAA 8 cut(s) 36, 315, 942, 1073, 1320, 1419, 1533, 1619
MslI CAYNNNNRTG 6 cut(s) 1046, 1444, 1491, 1552, 2018, 2142
Msp20I TGGCCA 2 cut(s) 161, 725
MspA1I CMGCKG 1 cut(s) 737
MspCI CTTAAG 1 cut(s) 35
MspI CCGG 6 cut(s) 20, 65, 138, 539, 1504, 1818
MspR9I CCNGG 4 cut(s) 163, 365, 1347, 1476
MunI CAATTG 1 cut(s) 601
Mva1269I GAATGC 3 cut(s) 4, 58, 1795
MvaI CCWGG 4 cut(s) 163, 365, 1347, 1476
MwoI GCNNNNNNNGC 8 cut(s) 20, 180, 731, 1830, 1839, 2006, 2015, 2104
NaeI GCCGGC 1 cut(s) 66
NcoI CCATGG 2 cut(s) 720, 1195
NdeI CATATG 1 cut(s) 1368
NdeII GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
NgoMIV GCCGGC 1 cut(s) 64
NheI GCTAGC 1 cut(s) 2203
NlaIV GGNNCC 7 cut(s) 411, 1451, 1473, 1651, 1816, 1915, 2175
NmeAIII GCCGAG 1 cut(s) 1448
NmuCI GTSAC 3 cut(s) 953, 1876, 2028
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1414
NspV TTCGAA 1 cut(s) 998
OliI CACNNNNGTG 1 cut(s) 1491
PciI ACATGT 1 cut(s) 1410
PciSI GCTCTTC 1 cut(s) 1571
PctI GAATGC 3 cut(s) 4, 58, 1795
PdiI GCCGGC 1 cut(s) 66
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 4 cut(s) 245, 297, 1386, 1781
PflMI CCANNNNNTGG 1 cut(s) 1224
PfoI TCCNGGA 1 cut(s) 1345
PkrI GCNGC 9 cut(s) 13, 16, 117, 388, 736, 1429, 1613, 1805, 1823
PleI GAGTC 2 cut(s) 1501, 1578
PpsI GAGTC 2 cut(s) 1501, 1578
PscI ACATGT 1 cut(s) 1410
PshBI ATTAAT 1 cut(s) 1419
PsiI TTATAA 1 cut(s) 1046
Psp6I CCWGG 4 cut(s) 161, 363, 1345, 1474
PspEI GGTNACC 1 cut(s) 1876
PspGI CCWGG 4 cut(s) 161, 363, 1345, 1474
PspN4I GGNNCC 7 cut(s) 411, 1451, 1473, 1651, 1816, 1915, 2175
PspPI GGNCC 8 cut(s) 467, 686, 1133, 1471, 1649, 1860, 1914, 1939
PstNI CAGNNNCTG 2 cut(s) 508, 532
PsuI RGATCY 1 cut(s) 409
PvuII CAGCTG 1 cut(s) 737
RsaI GTAC 8 cut(s) 222, 962, 1205, 1211, 1229, 1250, 1975, 2071
RsaNI GTAC 8 cut(s) 221, 961, 1204, 1210, 1228, 1249, 1974, 2070
RseI CAYNNNNRTG 6 cut(s) 1046, 1444, 1491, 1552, 2018, 2142
SapI GCTCTTC 1 cut(s) 1571
SaqAI TTAA 8 cut(s) 36, 315, 942, 1073, 1320, 1419, 1533, 1619
SatI GCNGC 9 cut(s) 12, 15, 116, 387, 735, 1428, 1612, 1804, 1822
Sau3AI GATC 6 cut(s) 189, 393, 409, 639, 1304, 2134
Sau96I GGNCC 8 cut(s) 467, 686, 1133, 1471, 1649, 1860, 1914, 1939
SchI GAGTC 2 cut(s) 1501, 1578
ScrFI CCNGG 4 cut(s) 163, 365, 1347, 1476
SduI GDGCHC 2 cut(s) 1663, 2176
SfaNI GCATC 5 cut(s) 102, 142, 183, 1746, 1987
SfuI TTCGAA 1 cut(s) 998
SinI GGWCC 3 cut(s) 467, 1649, 1939
SmiMI CAYNNNNRTG 6 cut(s) 1046, 1444, 1491, 1552, 2018, 2142
SmlI CTYRAG 5 cut(s) 35, 746, 1380, 1668, 1742
SmoI CTYRAG 5 cut(s) 35, 746, 1380, 1668, 1742
SpeI ACTAGT 1 cut(s) 1976
SspMI CTAG 5 cut(s) 1137, 1796, 1977, 2073, 2204
StyD4I CCNGG 4 cut(s) 161, 363, 1345, 1474
StyI CCWWGG 4 cut(s) 126, 720, 1195, 1218
TaaI ACNGT 8 cut(s) 147, 462, 481, 630, 953, 1080, 1540, 1601
TaiI ACGT 1 cut(s) 2005
TaqI TCGA 8 cut(s) 84, 101, 150, 243, 356, 998, 1303, 1899
TatI WGTACW 2 cut(s) 1248, 1973
TauI GCSGC 2 cut(s) 14, 1806
TfiI GAWTC 4 cut(s) 245, 297, 1386, 1781
Tru1I TTAA 8 cut(s) 36, 315, 942, 1073, 1320, 1419, 1533, 1619
Tru9I TTAA 8 cut(s) 36, 315, 942, 1073, 1320, 1419, 1533, 1619
TseFI GTSAC 3 cut(s) 953, 1876, 2028
TseI GCWGC 7 cut(s) 14, 115, 386, 734, 1427, 1611, 1821
Tsp45I GTSAC 3 cut(s) 953, 1876, 2028
TspDTI ATGAA 7 cut(s) 31, 393, 986, 1355, 1487, 1701, 1934
TspGWI ACGGA 1 cut(s) 1290
Van91I CCANNNNNTGG 1 cut(s) 1224
Vha464I CTTAAG 1 cut(s) 35
VpaK11BI GGWCC 3 cut(s) 467, 1649, 1939
VspI ATTAAT 1 cut(s) 1419
XagI CCTNNNNNAGG 1 cut(s) 1217
XapI RAATTY 5 cut(s) 258, 879, 1625, 2243, 2257
XceI RCATGY 1 cut(s) 1414
XcmI CCANNNNNNNNNTGG 1 cut(s) 1924
XmiI GTMKAC 1 cut(s) 2115
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 5 cut(s) 1137, 1796, 1977, 2073, 2204
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.