RLG00000004714

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0004577
Physical Location & Seq
Reverse (-)
61631023 .. 61636274
5252 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004714

Sequence Viewer

Length: 2781 bp
ATGAAGGAAACAGCCCCAGACGATCATATCGGAGCTGCTTCAGCCGGAGTAGCACCACCTCAGTATCACTCCGACACCGAGCTCGCCGGAAAGGAGGAAATGTCCGGTTCAGGCTACAGCAGTCCGCTCAGTCTCAGCGGAACTCTGAACAAAAGAGCAGGCAGCAAGAGGAGCAACAATGACGAACAAGAGCCTAACGTGGAGGTTACCCTCGACCTCCTCGACGACAACTCCGTCGCAGTCCGCAGCGTCAAGCCCCTGCCACGTGGAGGCGATGAGGACGAGCACCACCACAACACAGTCGACGACTCGCTCACTCTGCTCGGCGGCGACAGTAAGGCAGCCGAGAAGAGCAACGACCAGTCGTTCGTCCGTACGGCCTCCATGCGGATCAAGAAGGAGCTGAAGAAGCTGGCGTCGTTCTCGAAGCAGCCGCAGCAACGGCCCCGTTTCGACAGGATGCAGTCGGCGGCTGCTCCGGCCTTGAAGGGGCTAAAGTTCATAAGCAAGACGGACGGGAATGCGGAGTGGCCGGCTGTCGAGAAAAGGTTCGACAAGCTCACCGGCTCGACCAACGGGATGCTGACACGTCCGGCGTTCGGAGAGTGCATAGGGATGAACAAAGACTGCAAGGAGTTCGCCGGAAAACTGTTCGATGCTTTGGCCAGGAAGCATGGTATCAAAGGTGACTCGATCAACAAGGAGGAGTTGAAGGAGATGTGGGGACAAGCTTCTGAGCAGGGCTTCAATTCCAGGCTTCAGATTTTCTTTGACATGGTTGACAAGGATGGAGATGGAAGAATCACTGTAGAAGAGGTTAAGGAGATTATTAGCTTCAGTGCTTCTGCCAACAAACTATCAAACATCCAGAAACAAGCAGATGAGTATGCAGCATTGATCATGGAAGAGTTGGATCCAGACAATCTTGGATACATCATGATAGAAAGTTTGGAGATGCTCCTACTATATGGACCGCAGGAGACGGTGGTGCGAGGAAAAGAAAGCCGGAACCTGAGCAAAATGCTGAGCCAGAAGCTCAAGCCGGTAAGGGAGGACAACCCTCTGAGGAGGTGGTATAGGAGCACCAACTACTTTCTTGAAGACAATTGGCAAAGAGTTTGGGTAATGGCACTGTGGATTGGGATCATGGCTGGTCTATTTGCCTACAAGTACGTGCAGTATAAAAACAGGGCTGCATATCAATTAATGGGTCATTGTGTATCCATGGCCAAAGGTGCAGCTGAGACACTCAAGTTCAACATGGCTCTTATTCTACTTCCAGTGTGCAGAAACACTATCACCCTTCTGAGGAACAAGACCAAATTGGGTGTTGCTATTCCTTTTGATGACAACCTCAATTTCCATAAGGTGATAGCTATTGGAATTTCAGTAGGAGTTGGCATACACTCAATTTACCATTTGGCCTGTGATTTTCCTCGTCTCATTAAAGCAGACAGTGACAAGTACGCCCCGATGAAGCAATTTTTTGGGGAACAACCTTCAAACTATTGGTTTTTTCTGAAATCAGTGGAAGGAGTAACTGGCATTATAATGGTAGTGTTGATGACAATAGCCTTCACACTAGCAGCACCATGTTTTAGAAGAGGTAGGCTCAAGAACCTGCCCCAACCTCTCAAGAGGCTGACAGGCTTCAATGCCTTTTGGTACTCCCATCACCTCTTCGTCATTGTCTATACTTTGCTCATTGTCCATGGAGAGTACCTGTACCTCACCAAGGAATGGTACAAGAAAACGACTTGGATGTACTTGGCTGTTCCGCTTCTCCTTTACGGAGGTGAAAGATTAGTTCGGGCGTTTCGATCTAGCATCAAGCCTGTTAAGATAGTTAAGGTGGCTCTATATCCTGGAAATGTGTTGGCACTTCATATGTCAAAGCCTCAAGGCTTCAGATACCATAGTGGACAATATATGTTTATTAATTGTGCTGCTGTCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCGGCCCCTGGAGACGACCACCTTAGTGTTCATATCCGGACTCTTGGCGACTGGACGCAACAACTTAAAACAGTATTTTCACAGGTATGCCAACCACCTCCTTCTGGGAAGAGTGGACTCCTCAGAGCCGACTGTATGCAAGGCAACGATTTAAACTTTCCAAGAGTGCTAATAGATGGACCCTATGGAGCACCAGCTCAAGACTACATGAAATACGAAGTGGTGTTACTTGTAGGGTTGGGAATAGGAGCAACCCCAATGATAAGCATCCTCAAGGACATAGTAAACAACATAAAAGCCATAGAGGAGGAATCAGAGAATGCCCTAGAAAGCGGCACGGCCGGTTCCGGAGGCCCAGTGAGCATCAATGGCAACTTCAAGACCAAGAGGACCTACTTCTATTGGGTGACTCGAGAGCAAGGTTCGTTCGACTGGTTCAAAGGGGCCATGAACGAGGTGGCGGAGCTGGACCATAACAGAGTGATAGAGTTCCACAACTATTGCACTAGTGTTTATGAGGAAGGTGATGCACGTTCTGCTCTCATTGCTATGCTTCAGTCACTCAATCACGCCAAGAATGGGGTCGATATTGTATCGGGTACTAGGGTGAAGTCACATTTTGCTAAGCCTAACTGGCGTGAGGTCTACAAGCGCATTGCGCTGGATCACACCGATGCCAAAGTTGGGGTGTTCTACTGCGGGCCACCTGCTCTTACTGAAGAACTACGACAGCTAGCTCTGGATTTCAACCACAAAACCTCCACCAGATTTGAATTCCATAAAGAAAATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

927

Amino Acids

104.05

Weight (kDa)

8.68

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 150 - 251 2.1e-33 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 251 - 312 1.6e-06 EF-hand domain pair
Ferric_reduct PF01794 421 - 568 9e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 612 - 728 7.7e-36 FAD-binding domain
NAD_binding_6 PF08030 734 - 908 1.3e-49 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1550
AarI CACCTGC 1 cut(s) 2701
AasI GACNNNNNNGTC 1 cut(s) 233
Acc36I ACCTGC 2 cut(s) 1629, 2701
AccB1I GGYRCC 1 cut(s) 1968
AccB7I CCANNNNNTGG 1 cut(s) 1740
AccBSI CCGCTC 1 cut(s) 127
AccI GTMKAC 2 cut(s) 303, 2631
AccIII TCCGGA 2 cut(s) 2022, 2333
AclWI GGATC 5 cut(s) 398, 908, 921, 1151, 2658
AcoI YGGCCR 4 cut(s) 530, 663, 1227, 2325
AcsI RAATTY 3 cut(s) 1383, 2759, 2773
AcuI CTGAAG 7 cut(s) 24, 425, 743, 820, 1891, 2525, 2724
AcvI CACGTG 1 cut(s) 266
AcyI GRCGYC 1 cut(s) 416
AfaI GTAC 9 cut(s) 376, 1172, 1466, 1667, 1721, 1727, 1745, 1766, 2587
AflIII ACRYGT 1 cut(s) 587
AhlI ACTAGT 1 cut(s) 2492
AjiI CACGTC 1 cut(s) 590
AjnI CCWGG 4 cut(s) 665, 752, 1864, 1993
AleI CACNNNNGTG 1 cut(s) 2010
Alw21I GWGCWC 4 cut(s) 84, 288, 1085, 2179
Alw26I GTCTC 6 cut(s) 137, 974, 1238, 1445, 1957, 1992
AlwI GGATC 5 cut(s) 398, 908, 921, 1151, 2658
Ama87I CYCGRG 1 cut(s) 2397
Aor13HI TCCGGA 2 cut(s) 2022, 2333
ApoI RAATTY 3 cut(s) 1383, 2759, 2773
ArsI GACNNNNNNTTYG 2 cut(s) 350, 382
AseI ATTAAT 2 cut(s) 1205, 1938
Asp700I GAANNNNTTC 1 cut(s) 548
AspLEI GCGC 2 cut(s) 2640, 2647
AspS9I GGNCC 9 cut(s) 444, 971, 1990, 2165, 2339, 2376, 2430, 2455, 2687
AsuNHI GCTAGC 1 cut(s) 2719
AvaI CYCGRG 1 cut(s) 2397
AvaII GGWCC 4 cut(s) 971, 2165, 2376, 2455
BaeI ACNNNNGTAYC 6 cut(s) 47, 80, 1903, 1936, 2577, 2610
BalI TGGCCA 2 cut(s) 665, 1229
BamHI GGATCC 1 cut(s) 913
BanI GGYRCC 1 cut(s) 1968
BanII GRGCYC 1 cut(s) 84
BarI GAAGNNNNNNTAC 2 cut(s) 2196, 2228
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 1107
Bbv12I GWGCWC 4 cut(s) 84, 288, 1085, 2179
BccI CCATC 5 cut(s) 782, 788, 1680, 1988, 2156
BceAI ACGGC 3 cut(s) 393, 458, 2340
BcgI CGANNNNNNTGC 2 cut(s) 619, 653
BciT130I CCWGG 4 cut(s) 667, 754, 1866, 1995
BciVI GTATCC 2 cut(s) 923, 1231
BclI TGATCA 1 cut(s) 897
BcoDI GTCTC 6 cut(s) 137, 974, 1238, 1445, 1957, 1992
BcuI ACTAGT 1 cut(s) 2492
BfaI CTAG 6 cut(s) 1583, 1824, 2312, 2493, 2589, 2720
BfmI CTRYAG 2 cut(s) 115, 807
BfuAI ACCTGC 2 cut(s) 1629, 2701
BfuI GTATCC 2 cut(s) 923, 1231
BglI GCCNNNNNGGC 1 cut(s) 2620
BlpI GCTNAGC 2 cut(s) 1025, 2610
Bme1390I CCNGG 4 cut(s) 667, 754, 1866, 1995
Bme18I GGWCC 4 cut(s) 971, 2165, 2376, 2455
BmeT110I CYCGRG 1 cut(s) 2397
BmgBI CACGTC 1 cut(s) 590
BmgT120I GGNCC 9 cut(s) 444, 971, 1990, 2165, 2339, 2376, 2430, 2455, 2687
BmiI GGNNCC 8 cut(s) 446, 915, 1010, 1970, 1992, 2167, 2332, 2431
BmrFI CCNGG 4 cut(s) 667, 754, 1866, 1995
BmrI ACTGGG 1 cut(s) 2336
BmsI GCATC 9 cut(s) 450, 570, 646, 945, 1836, 2262, 2358, 2503, 2650
BmtI GCTAGC 1 cut(s) 2723
BmuI ACTGGG 1 cut(s) 2336
BpiI GAAGAC 1 cut(s) 1107
BplI GAGNNNNNCTC 2 cut(s) 1596, 1628
BpmI CTGGAG 1 cut(s) 2016
Bpu10I CCTNAGC 1 cut(s) 1013
Bpu1102I GCTNAGC 2 cut(s) 1025, 2610
BpuEI CTTGAG 7 cut(s) 1022, 1235, 1598, 1619, 1884, 2169, 2243
BsaAI YACGTR 2 cut(s) 266, 1174
BsaBI GATNNNNATC 2 cut(s) 1142, 2252
BsaHI GRCGYC 1 cut(s) 416
BsaJI CCNNGG 5 cut(s) 1224, 1711, 1734, 1986, 1993
BsaWI WCCGGW 3 cut(s) 104, 2022, 2333
BsaXI ACNNNNNCTCC 8 cut(s) 86, 116, 215, 245, 2328, 2358, 2729, 2759
Bse118I RCCGGY 4 cut(s) 532, 563, 1042, 2327
Bse1I ACTGG 7 cut(s) 361, 1280, 1546, 2042, 2342, 2423, 2624
Bse3DI GCAATG 2 cut(s) 2529, 2640
Bse8I GATNNNNATC 2 cut(s) 1142, 2252
BseAI TCCGGA 2 cut(s) 2022, 2333
BseBI CCWGG 4 cut(s) 667, 754, 1866, 1995
BseDI CCNNGG 5 cut(s) 1224, 1711, 1734, 1986, 1993
BseGI GGATG 7 cut(s) 465, 585, 621, 793, 864, 1767, 2253
BseJI GATNNNNATC 2 cut(s) 1142, 2252
BseMI GCAATG 2 cut(s) 2529, 2640
BseNI ACTGG 7 cut(s) 361, 1280, 1546, 2042, 2342, 2423, 2624
BseRI GAGGAG 6 cut(s) 184, 209, 719, 1081, 2096, 2306
BseX3I CGGCCG 1 cut(s) 2325
BsgI GTGCAG 3 cut(s) 1196, 1257, 1306
Bsh1285I CGRYCG 1 cut(s) 2328
BshNI GGYRCC 1 cut(s) 1968
BsiEI CGRYCG 1 cut(s) 2328
BsiHKAI GWGCWC 4 cut(s) 84, 288, 1085, 2179
BsiHKCI CYCGRG 1 cut(s) 2397
BsiWI CGTACG 1 cut(s) 374
BslFI GGGAC 1 cut(s) 738
BsmAI GTCTC 6 cut(s) 137, 974, 1238, 1445, 1957, 1992
BsmBI CGTCTC 3 cut(s) 974, 1445, 1992
BsmFI GGGAC 1 cut(s) 738
BsmI GAATGC 2 cut(s) 526, 2311
BsoBI CYCGRG 1 cut(s) 2397
Bsp1286I GDGCHC 4 cut(s) 84, 288, 1085, 2179
Bsp13I TCCGGA 2 cut(s) 2022, 2333
Bsp143I GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
Bsp1720I GCTNAGC 2 cut(s) 1025, 2610
Bsp19I CCATGG 2 cut(s) 1224, 1711
BspEI TCCGGA 2 cut(s) 2022, 2333
BspHI TCATGA 1 cut(s) 936
BspLI GGNNCC 8 cut(s) 446, 915, 1010, 1970, 1992, 2167, 2332, 2431
BspMI ACCTGC 2 cut(s) 1629, 2701
BspOI GCTAGC 1 cut(s) 2723
BspPI GGATC 5 cut(s) 398, 908, 921, 1151, 2658
BspQI GCTCTTC 1 cut(s) 344
BspT107I GGYRCC 1 cut(s) 1968
BsrBI CCGCTC 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 2529, 2640
BsrFI RCCGGY 4 cut(s) 532, 563, 1042, 2327
BsrI ACTGG 7 cut(s) 361, 1280, 1546, 2042, 2342, 2423, 2624
BssAI RCCGGY 4 cut(s) 532, 563, 1042, 2327
BssECI CCNNGG 5 cut(s) 1224, 1711, 1734, 1986, 1993
BssMI GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
BssNI GRCGYC 1 cut(s) 416
BssT1I CCWWGG 3 cut(s) 1224, 1711, 1734
Bst2UI CCWGG 4 cut(s) 667, 754, 1866, 1995
Bst4CI ACNGT 9 cut(s) 301, 335, 651, 808, 985, 1134, 1457, 2059, 2120
Bst6I CTCTTC 6 cut(s) 344, 807, 900, 1597, 1685, 2090
BstACI GRCGYC 1 cut(s) 416
BstAPI GCANNNNNTGC 1 cut(s) 2522
BstBAI YACGTR 2 cut(s) 266, 1174
BstC8I GCNNGC 6 cut(s) 84, 160, 414, 534, 2687, 2721
BstDSI CCRYGG 2 cut(s) 1224, 1711
BstEII GGTNACC 1 cut(s) 205
BstENI CCTNNNNNAGG 1 cut(s) 1733
BstF5I GGATG 7 cut(s) 465, 585, 621, 793, 864, 1767, 2253
BstHHI GCGC 2 cut(s) 2640, 2647
BstKTI GATC 8 cut(s) 25, 393, 696, 900, 916, 1146, 1823, 2653
BstMAI GTCTC 6 cut(s) 137, 974, 1238, 1445, 1957, 1992
BstMBI GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
BstMCI CGRYCG 1 cut(s) 2328
BstNI CCWGG 4 cut(s) 667, 754, 1866, 1995
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 4 cut(s) 665, 752, 1864, 1993
BstSFI CTRYAG 2 cut(s) 115, 807
BstV2I GAAGAC 1 cut(s) 1107
BstX2I RGATCY 1 cut(s) 913
BstXI CCANNNNNNTGG 1 cut(s) 1965
BstYI RGATCY 1 cut(s) 913
BstZI CGGCCG 1 cut(s) 2325
BsuI GTATCC 2 cut(s) 923, 1231
BtgI CCRYGG 2 cut(s) 1224, 1711
BtgZI GCGATG 1 cut(s) 288
BtrI CACGTC 1 cut(s) 590
BtsCI GGATG 7 cut(s) 465, 585, 621, 793, 864, 1767, 2253
BtsIMutI CAGTG 7 cut(s) 804, 844, 1130, 1287, 1462, 1533, 2349
BveI ACCTGC 2 cut(s) 1629, 2701
Cac8I GCNNGC 6 cut(s) 84, 160, 414, 534, 2687, 2721
CciI TCATGA 1 cut(s) 936
CfoI GCGC 2 cut(s) 2640, 2647
Cfr10I RCCGGY 4 cut(s) 532, 563, 1042, 2327
Cfr13I GGNCC 9 cut(s) 444, 971, 1990, 2165, 2339, 2376, 2430, 2455, 2687
CseI GACGC 3 cut(s) 238, 405, 2050
Csp6I GTAC 9 cut(s) 375, 1171, 1465, 1666, 1720, 1726, 1744, 1765, 2586
CspCI CAANNNNNGTGG 4 cut(s) 2468, 2503, 2737, 2772
CviQI GTAC 9 cut(s) 375, 1171, 1465, 1666, 1720, 1726, 1744, 1765, 2586
DpnI GATC 8 cut(s) 24, 392, 695, 899, 915, 1145, 1822, 2652
DpnII GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
DraI TTTAAA 1 cut(s) 2139
DrdI GACNNNNNNGTC 1 cut(s) 233
DseDI GACNNNNNNGTC 1 cut(s) 233
EaeI YGGCCR 4 cut(s) 530, 663, 1227, 2325
EagI CGGCCG 1 cut(s) 2325
Eam1104I CTCTTC 6 cut(s) 344, 807, 900, 1597, 1685, 2090
EarI CTCTTC 6 cut(s) 344, 807, 900, 1597, 1685, 2090
EciI GGCGGA 1 cut(s) 2462
Ecl136II GAGCTC 1 cut(s) 82
EclXI CGGCCG 1 cut(s) 2325
Eco130I CCWWGG 3 cut(s) 1224, 1711, 1734
Eco24I GRGCYC 1 cut(s) 84
Eco47I GGWCC 4 cut(s) 971, 2165, 2376, 2455
Eco52I CGGCCG 1 cut(s) 2325
Eco53kI GAGCTC 1 cut(s) 82
Eco57I CTGAAG 7 cut(s) 24, 425, 743, 820, 1891, 2525, 2724
Eco72I CACGTG 1 cut(s) 266
Eco88I CYCGRG 1 cut(s) 2397
Eco91I GGTNACC 1 cut(s) 205
EcoICRI GAGCTC 1 cut(s) 82
EcoNI CCTNNNNNAGG 1 cut(s) 1733
EcoO109I RGGNCCY 1 cut(s) 2376
EcoO65I GGTNACC 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 2759
EcoRII CCWGG 4 cut(s) 665, 752, 1864, 1993
EcoT14I CCWWGG 3 cut(s) 1224, 1711, 1734
EcoT38I GRGCYC 1 cut(s) 84
ErhI CCWWGG 3 cut(s) 1224, 1711, 1734
Esp3I CGTCTC 3 cut(s) 974, 1445, 1992
FaqI GGGAC 1 cut(s) 738
FauI CCCGC 1 cut(s) 2678
FauNDI CATATG 1 cut(s) 1887
FbaI TGATCA 1 cut(s) 897
FblI GTMKAC 2 cut(s) 303, 2631
FokI GGATG 7 cut(s) 472, 592, 628, 800, 851, 1774, 2240
FriOI GRGCYC 1 cut(s) 84
FspBI CTAG 6 cut(s) 1583, 1824, 2312, 2493, 2589, 2720
GlaI GCGC 2 cut(s) 2639, 2646
GsuI CTGGAG 1 cut(s) 2016
HgaI GACGC 3 cut(s) 238, 405, 2050
HhaI GCGC 2 cut(s) 2640, 2647
Hin1I GRCGYC 1 cut(s) 416
Hin6I GCGC 2 cut(s) 2638, 2645
HinP1I GCGC 2 cut(s) 2638, 2645
HincII GTYRAC 2 cut(s) 304, 781
HindII GTYRAC 2 cut(s) 304, 781
HindIII AAGCTT 1 cut(s) 729
HinfI GANTC 7 cut(s) 308, 689, 801, 2026, 2103, 2297, 2395
Hpy166II GTNNAC 6 cut(s) 304, 781, 1922, 2102, 2272, 2632
Hpy8I GTNNAC 6 cut(s) 304, 781, 1922, 2102, 2272, 2632
Hpy99I CGWCG 4 cut(s) 227, 239, 308, 421
HpyAV CCTTC 9 cut(s) 391, 481, 706, 1313, 1509, 1526, 1585, 2097, 2501
HpyCH4III ACNGT 9 cut(s) 301, 335, 651, 808, 985, 1134, 1457, 2059, 2120
HpyCH4IV ACGT 5 cut(s) 198, 265, 589, 1173, 2518
HpySE526I ACGT 5 cut(s) 198, 265, 589, 1173, 2518
Hsp92I GRCGYC 1 cut(s) 416
HspAI GCGC 2 cut(s) 2638, 2645
Kpn2I TCCGGA 2 cut(s) 2022, 2333
KroI GCCGGC 1 cut(s) 532
KroNI GCCGGC 1 cut(s) 534
Ksp22I TGATCA 1 cut(s) 897
Kzo9I GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
LguI GCTCTTC 1 cut(s) 344
LmnI GCTCC 9 cut(s) 32, 171, 400, 481, 963, 1080, 2174, 2234, 2449
LweI GCATC 9 cut(s) 450, 570, 646, 945, 1836, 2262, 2358, 2503, 2650
MaeI CTAG 6 cut(s) 1583, 1824, 2312, 2493, 2589, 2720
MaeII ACGT 5 cut(s) 198, 265, 589, 1173, 2518
MaeIII GTNAC 8 cut(s) 205, 686, 1457, 1537, 2211, 2392, 2544, 2598
MalI GATC 8 cut(s) 24, 392, 695, 899, 915, 1145, 1822, 2652
MbiI CCGCTC 1 cut(s) 127
MboI GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
MfeI CAATTG 1 cut(s) 1105
MflI RGATCY 1 cut(s) 913
MhlI GDGCHC 4 cut(s) 84, 288, 1085, 2179
MlsI TGGCCA 2 cut(s) 665, 1229
MluNI TGGCCA 2 cut(s) 665, 1229
MlyI GAGTC 5 cut(s) 302, 683, 2020, 2097, 2389
MmeI TCCRAC 2 cut(s) 96, 891
Mox20I TGGCCA 2 cut(s) 665, 1229
MroI TCCGGA 2 cut(s) 2022, 2333
MroNI GCCGGC 1 cut(s) 532
MroXI GAANNNNTTC 1 cut(s) 548
MscI TGGCCA 2 cut(s) 665, 1229
MseI TTAA 8 cut(s) 819, 1205, 1446, 1839, 1848, 1938, 2052, 2138
MslI CAYNNNNRTG 7 cut(s) 614, 1550, 1963, 2010, 2071, 2534, 2658
Msp20I TGGCCA 2 cut(s) 665, 1229
MspA1I CMGCKG 2 cut(s) 138, 1241
MspR9I CCNGG 4 cut(s) 667, 754, 1866, 1995
MunI CAATTG 1 cut(s) 1105
Mva1269I GAATGC 2 cut(s) 526, 2311
MvaI CCWGG 4 cut(s) 667, 754, 1866, 1995
NaeI GCCGGC 1 cut(s) 534
NcoI CCATGG 2 cut(s) 1224, 1711
NdeI CATATG 1 cut(s) 1887
NdeII GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
NgoMIV GCCGGC 1 cut(s) 532
NheI GCTAGC 1 cut(s) 2719
NlaIV GGNNCC 8 cut(s) 446, 915, 1010, 1970, 1992, 2167, 2332, 2431
NmeAIII GCCGAG 3 cut(s) 303, 370, 1967
NmuCI GTSAC 5 cut(s) 686, 1457, 2392, 2544, 2598
OliI CACNNNNGTG 1 cut(s) 2010
PaeR7I CTCGAG 1 cut(s) 2397
PagI TCATGA 1 cut(s) 936
PaqCI CACCTGC 1 cut(s) 2701
PciSI GCTCTTC 1 cut(s) 344
PcsI WCGNNNNNNNCGW 3 cut(s) 219, 231, 1816
PctI GAATGC 2 cut(s) 526, 2311
PdiI GCCGGC 1 cut(s) 534
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 2 cut(s) 801, 2297
Pfl23II CGTACG 1 cut(s) 374
PflMI CCANNNNNTGG 1 cut(s) 1740
PfoI TCCNGGA 1 cut(s) 1864
PleI GAGTC 5 cut(s) 302, 683, 2020, 2097, 2389
PmaCI CACGTG 1 cut(s) 266
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 5 cut(s) 302, 683, 2020, 2097, 2389
Ppu21I YACGTR 2 cut(s) 266, 1174
PpuMI RGGWCCY 1 cut(s) 2376
PshBI ATTAAT 2 cut(s) 1205, 1938
PsiI TTATAA 1 cut(s) 1550
Psp124BI GAGCTC 1 cut(s) 84
Psp5II RGGWCCY 1 cut(s) 2376
Psp6I CCWGG 4 cut(s) 665, 752, 1864, 1993
PspCI CACGTG 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 205
PspGI CCWGG 4 cut(s) 665, 752, 1864, 1993
PspLI CGTACG 1 cut(s) 374
PspN4I GGNNCC 8 cut(s) 446, 915, 1010, 1970, 1992, 2167, 2332, 2431
PspPI GGNCC 9 cut(s) 444, 971, 1990, 2165, 2339, 2376, 2430, 2455, 2687
PspPPI RGGWCCY 1 cut(s) 2376
PsuI RGATCY 1 cut(s) 913
PvuII CAGCTG 1 cut(s) 1241
RsaI GTAC 9 cut(s) 376, 1172, 1466, 1667, 1721, 1727, 1745, 1766, 2587
RsaNI GTAC 9 cut(s) 375, 1171, 1465, 1666, 1720, 1726, 1744, 1765, 2586
RseI CAYNNNNRTG 7 cut(s) 614, 1550, 1963, 2010, 2071, 2534, 2658
SacI GAGCTC 1 cut(s) 84
SalI GTCGAC 1 cut(s) 302
SapI GCTCTTC 1 cut(s) 344
SaqAI TTAA 8 cut(s) 819, 1205, 1446, 1839, 1848, 1938, 2052, 2138
Sau3AI GATC 8 cut(s) 22, 390, 693, 897, 913, 1143, 1820, 2650
Sau96I GGNCC 9 cut(s) 444, 971, 1990, 2165, 2339, 2376, 2430, 2455, 2687
SchI GAGTC 5 cut(s) 302, 683, 2020, 2097, 2389
ScrFI CCNGG 4 cut(s) 667, 754, 1866, 1995
SduI GDGCHC 4 cut(s) 84, 288, 1085, 2179
SfaNI GCATC 9 cut(s) 450, 570, 646, 945, 1836, 2262, 2358, 2503, 2650
SfcI CTRYAG 2 cut(s) 115, 807
Sfr274I CTCGAG 1 cut(s) 2397
SinI GGWCC 4 cut(s) 971, 2165, 2376, 2455
SlaI CTCGAG 1 cut(s) 2397
SmiMI CAYNNNNRTG 7 cut(s) 614, 1550, 1963, 2010, 2071, 2534, 2658
SmlI CTYRAG 8 cut(s) 1037, 1250, 1613, 1634, 1899, 2184, 2258, 2397
SmoI CTYRAG 8 cut(s) 1037, 1250, 1613, 1634, 1899, 2184, 2258, 2397
SpeI ACTAGT 1 cut(s) 2492
SspMI CTAG 6 cut(s) 1583, 1824, 2312, 2493, 2589, 2720
SstI GAGCTC 1 cut(s) 84
StyD4I CCNGG 4 cut(s) 665, 752, 1864, 1993
StyI CCWWGG 3 cut(s) 1224, 1711, 1734
TaaI ACNGT 9 cut(s) 301, 335, 651, 808, 985, 1134, 1457, 2059, 2120
TaiI ACGT 5 cut(s) 201, 268, 592, 1176, 2521
TatI WGTACW 1 cut(s) 1764
TauI GCSGC 4 cut(s) 330, 436, 473, 2322
TfiI GAWTC 2 cut(s) 801, 2297
Tru1I TTAA 8 cut(s) 819, 1205, 1446, 1839, 1848, 1938, 2052, 2138
Tru9I TTAA 8 cut(s) 819, 1205, 1446, 1839, 1848, 1938, 2052, 2138
TscAI CASTG 7 cut(s) 811, 844, 1137, 1287, 1462, 1533, 2349
TseFI GTSAC 5 cut(s) 686, 1457, 2392, 2544, 2598
Tsp45I GTSAC 5 cut(s) 686, 1457, 2392, 2544, 2598
TspDTI ATGAA 8 cut(s) 17, 490, 632, 1490, 1874, 2006, 2210, 2450
TspGWI ACGGA 4 cut(s) 223, 362, 527, 1806
TspRI CASTG 7 cut(s) 811, 844, 1137, 1287, 1462, 1533, 2349
Van91I CCANNNNNTGG 1 cut(s) 1740
VpaK11BI GGWCC 4 cut(s) 971, 2165, 2376, 2455
VspI ATTAAT 2 cut(s) 1205, 1938
XagI CCTNNNNNAGG 1 cut(s) 1733
XapI RAATTY 3 cut(s) 1383, 2759, 2773
XcmI CCANNNNNNNNNTGG 1 cut(s) 2440
XhoI CTCGAG 1 cut(s) 2397
XmiI GTMKAC 2 cut(s) 303, 2631
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 6 cut(s) 1583, 1824, 2312, 2493, 2589, 2720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.