Rroxscaffold_3G00254540

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0004577
Physical Location & Seq
Reverse (-)
48785348 .. 48790679
5332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254540.1

Sequence Viewer

Length: 2292 bp
ATGCATTCGGCGGCTGCTCCGGCTCTAAAGGGGCTTAAGTTCATAAGCAAGAATGCGGAGTGGCCGGCGGTGGAGAGAAGGTTCGACGAGCTCACCACCAACGGGATGCTGCCACGTGCGTTGTTCGGAGAGTGCATCGGGATGGACAGAGCCTCCAAGGAGTTCGCCGGAATACTGTTCGATGCTTTGGCCAGGAGGCATGGCATCAATGGCGACTCGATCACCAAGGAGGAGTTGAGGGAGATGTGGGTACAAGTTTCTAAGCAGGACTTCGATTCCAGTCTTCAAATTTTCTTTGACATGGTTGATAAGGATGGAGATGGAAGAATCAGTGTGGAAGATGTTAAGGAGATGATTAGCTTCAGTGCTTCTGTCAACAAATTATCAAACATCCAGGCACAAGCAGATGAATATGCAGCATTGATCATGGAAGAGTTGGATCCAGACAATCTTGGATACATCACGACAGAAAGTTTGGAGACGCTCCTACTGTATGGACCACAGGAGACAGTGGTGCGAGGAAAGGAGAGCCAGAACCTGAGTAAAATGCTGAGCCAGAAGCTGAAGCCGGTAAGGGAGGACAACCCTCTGAGGAGGTGGTATAGGAGCACTAACTACTTTCTTGAAGACAATTGGCGGAGAGTTTGGGTAATGGCACTGTGGATTGGGATCATGGCTGGTCTATTTGCCTATAAGTATGTGCAGTATAAAGACGGGCCTGCATATCAAGTAATGGGTCATTGTGTATCCATGGCCAAAGGTGCAGCTGAGACACTCAAGTTCAACATGGCTCTTATTCTACTTCCATTGTGCAGAAACACTATCACTCTTCTGAGGAACAAGACCAAATTGGGTGTTGCTATTCCTTTTGATGACGACCTCAATTTCCATAAGGTGATAGCTATTGGAATTTCAGTAGGGGTTGGCATACACTCAATTTACCATTTGGCCTGTGATTTCCCTCGTCTCATTAAAGCAGACAGTGACAAGTACGCCCTAATGAAGCAATTTTTTGGGGAACAACCTTTGAACTATTGGTTTTTTCTGAAATCAGTGGAAGGAGTAACTGGCATTATAATGGTAGTGTTGATGACAATAGCCTTAATACTAGCAGCACCATGTTTTAGAAGAGGTAGGTTCTACCGCCTCAGGAGGCTCACTGGCCCTAGAGCCTTTTTGTACTCCCATCAACTCTTTATCATTGTCTATACTTTGCTCATTGTCCATGGAGAGTACCTGTACCTCACCAAGGAATGGTACAAGAAAACGACTTGGATGTACTTGGCTGTTCCGCTTCTCCTTTACGGAGGTGAAAGATTGGTTCAGGTGCTTCGATCTATCAAGCCTGTTAAGATACTAAAGGTGGCTGTATATCCTGGAAATGTGTTGTCAGTTCATATGTCAAAGCCTCAAGGCTTCAGATACCATAGTGGGCAATACATGTTTATTAATTGTGCTGCTGTCTCCTCATTTGAATGGCACCCATTTTACATCACCTCGGCCCCAGGAGACGACCACCTCAGTGTTCATATCCGGACTCTTGGCAAATGGACGCGACAACTTAAAATAGTATTTTCACAGATATGGCAACCACCTCCTTCTGGGAAGAGTGGACTCCTCAGAGCCGACTGTATGCAAGGCAACGACTTAAAATTTCCAAGATTGCTAATAGATGGACCCTATGGAGCACGAGCTCAAGACTACAAGAAATACGAAGTGGTGTTACTTGTAGGGTTGGGAATAGGAGCAACCCCAATGATAAGCATCCTCAAGGACATAGTGAACAATATCAAAGCCATAGAGGAGGAATCAGAGAATGCCCTAGAAAGCGGCACGGCTGGTTCCGGCGGCCCAGTGAGCCTCCGCAGCAACTTCAAGACCAAGAGGGCATACTTCTACTGGGTGACCCGAGAGCAAGGTTCGTTCGACTGGTTCAAAGGGGCCATGAACGAGGTGGCGGAGCTGGACCATAACAGAGTGATAGAGTTCCACAACTATTGTACTAGTGTTTATGAGGAAGGTGATGCACGTTCTGCTCTCATTGCTATGCTTCAGTCACTCAATCATGCCAAGAATGGGGTCGATATTGTGTCGGGTACTAGGGTGAAGTCGCATTTTGCAAAGCCCAACTGGCGTGAGGTCTACAAGCGCATCGTGCTGGATCACACCAATGCCAAAGTTGGGGTGTTCTACTGCGGGGCACCTGCTCTAACTGAAGAACTACAACAGCTAGCTCTGGATTTCAGCCACAGAACCTCCACCAGATTTGAATTCCATAAAGAAAATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

763

Amino Acids

86.79

Weight (kDa)

8.96

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 2 - 93 1.2e-31 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 93 - 155 1.7e-06 EF-hand domain pair
Ferric_reduct PF01794 263 - 406 5.5e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 449 - 564 7.1e-33 FAD-binding domain
NAD_binding_6 PF08030 571 - 745 2.3e-49 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1076
AarI CACCTGC 1 cut(s) 2212
Acc36I ACCTGC 1 cut(s) 2212
AccB1I GGYRCC 2 cut(s) 1479, 2200
AccB7I CCANNNNNTGG 1 cut(s) 1254
AccI GTMKAC 1 cut(s) 2142
AccII CGCG 1 cut(s) 1555
AccIII TCCGGA 1 cut(s) 1533
AclWI GGATC 4 cut(s) 434, 447, 677, 2169
AcoI YGGCCR 3 cut(s) 62, 189, 753
AcsI RAATTY 5 cut(s) 288, 909, 1652, 2270, 2284
AcuI CTGAAG 5 cut(s) 346, 584, 1402, 2036, 2235
AcvI CACGTG 1 cut(s) 116
AfaI GTAC 9 cut(s) 252, 992, 1181, 1235, 1241, 1259, 1280, 2002, 2098
AfiI CCNNNNNNNGG 6 cut(s) 102, 1249, 1254, 1601, 2076, 2181
AflII CTTAAG 1 cut(s) 35
AflIII ACRYGT 1 cut(s) 1440
AgsI TTSAA 8 cut(s) 287, 626, 784, 1030, 1475, 1876, 1936, 2270
AhlI ACTAGT 1 cut(s) 2003
AjnI CCWGG 4 cut(s) 191, 393, 1375, 1504
AleI CACNNNNGTG 1 cut(s) 1521
AloI GAACNNNNNNTCC 2 cut(s) 65, 97
AluBI AGCT 9 cut(s) 91, 360, 562, 767, 902, 1694, 1963, 2230, 2234
AluI AGCT 9 cut(s) 91, 360, 562, 767, 902, 1694, 1963, 2230, 2234
Alw21I GWGCWC 4 cut(s) 93, 611, 1690, 1696
Alw26I GTCTC 6 cut(s) 473, 500, 764, 971, 1468, 1503
AlwI GGATC 4 cut(s) 434, 447, 677, 2169
AlwNI CAGNNNCTG 2 cut(s) 538, 562
Ama87I CYCGRG 1 cut(s) 1908
Aor13HI TCCGGA 1 cut(s) 1533
AoxI GGCC 9 cut(s) 62, 189, 716, 753, 948, 1162, 1500, 1849, 1941
ApeKI GCWGC 7 cut(s) 14, 109, 416, 764, 1112, 1457, 1866
ApoI RAATTY 5 cut(s) 288, 909, 1652, 2270, 2284
ArsI GACNNNNNNTTYG 2 cut(s) 457, 489
AseI ATTAAT 1 cut(s) 1449
AspLEI GCGC 1 cut(s) 2151
AspS9I GGNCC 8 cut(s) 497, 716, 1163, 1501, 1676, 1850, 1941, 1966
AsuHPI GGTGA 9 cut(s) 85, 214, 907, 1237, 1322, 1486, 1915, 2033, 2116
AsuNHI GCTAGC 1 cut(s) 2230
AvaI CYCGRG 1 cut(s) 1908
AvaII GGWCC 3 cut(s) 497, 1676, 1966
AxyI CCTNAGG 1 cut(s) 1148
BaeGI GKGCMC 1 cut(s) 2203
BaeI ACNNNNGTAYC 4 cut(s) 1414, 1447, 2088, 2121
BalI TGGCCA 2 cut(s) 191, 755
BamHI GGATCC 1 cut(s) 439
BanI GGYRCC 2 cut(s) 1479, 2200
BanII GRGCYC 2 cut(s) 93, 1696
BarI GAAGNNNNNNTAC 2 cut(s) 1707, 1739
BauI CACGAG 1 cut(s) 1689
BbrPI CACGTG 1 cut(s) 116
BbsI GAAGAC 2 cut(s) 275, 633
Bbv12I GWGCWC 4 cut(s) 93, 611, 1690, 1696
BbvI GCAGC 6 cut(s) 96, 428, 776, 1124, 1444, 1878
BccI CCATC 5 cut(s) 136, 308, 314, 1194, 1667
BceAI ACGGC 1 cut(s) 1851
BciT130I CCWGG 4 cut(s) 193, 395, 1377, 1506
BciVI GTATCC 2 cut(s) 449, 757
BclI TGATCA 1 cut(s) 423
BcoDI GTCTC 6 cut(s) 473, 500, 764, 971, 1468, 1503
BcuI ACTAGT 1 cut(s) 2003
BfaI CTAG 6 cut(s) 1109, 1167, 1823, 2004, 2100, 2231
BfrI CTTAAG 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 2212
BfuI GTATCC 2 cut(s) 449, 757
BglI GCCNNNNNGGC 1 cut(s) 2131
BlpI GCTNAGC 1 cut(s) 551
Bme1390I CCNGG 4 cut(s) 193, 395, 1377, 1506
Bme18I GGWCC 3 cut(s) 497, 1676, 1966
BmeT110I CYCGRG 1 cut(s) 1908
BmgT120I GGNCC 8 cut(s) 497, 716, 1163, 1501, 1676, 1850, 1941, 1966
BmiI GGNNCC 7 cut(s) 441, 1481, 1503, 1678, 1843, 1942, 2202
BmrFI CCNGG 4 cut(s) 193, 395, 1377, 1506
BmrI ACTGGG 2 cut(s) 1847, 1909
BmsI GCATC 7 cut(s) 96, 144, 172, 213, 1773, 2014, 2160
BmtI GCTAGC 1 cut(s) 2234
BmuI ACTGGG 2 cut(s) 1847, 1909
BpiI GAAGAC 2 cut(s) 275, 633
Bpu1102I GCTNAGC 1 cut(s) 551
BpuEI CTTGAG 4 cut(s) 761, 1395, 1680, 1754
BsaAI YACGTR 1 cut(s) 116
BsaBI GATNNNNATC 2 cut(s) 668, 1763
BsaJI CCNNGG 7 cut(s) 156, 225, 750, 1225, 1248, 1497, 1504
BsaWI WCCGGW 1 cut(s) 1533
BsaXI ACNNNNNCTCC 6 cut(s) 65, 95, 137, 167, 2240, 2270
Bsc4I CCNNNNNNNGG 6 cut(s) 102, 1249, 1254, 1601, 2076, 2181
Bse118I RCCGGY 2 cut(s) 64, 568
Bse1I ACTGG 7 cut(s) 279, 1072, 1165, 1853, 1904, 1934, 2135
Bse21I CCTNAGG 1 cut(s) 1148
Bse3DI GCAATG 1 cut(s) 2040
Bse8I GATNNNNATC 2 cut(s) 668, 1763
BseAI TCCGGA 1 cut(s) 1533
BseBI CCWGG 4 cut(s) 193, 395, 1377, 1506
BseDI CCNNGG 7 cut(s) 156, 225, 750, 1225, 1248, 1497, 1504
BseGI GGATG 6 cut(s) 111, 147, 319, 390, 1281, 1764
BseJI GATNNNNATC 2 cut(s) 668, 1763
BseLI CCNNNNNNNGG 6 cut(s) 102, 1249, 1254, 1601, 2076, 2181
BseMI GCAATG 1 cut(s) 2040
BseMII CTCAG 8 cut(s) 530, 542, 581, 759, 824, 1162, 1534, 1633
BseNI ACTGG 7 cut(s) 279, 1072, 1165, 1853, 1904, 1934, 2135
BseRI GAGGAG 5 cut(s) 245, 607, 1456, 1607, 1817
BseSI GKGCMC 1 cut(s) 2203
BseXI GCAGC 6 cut(s) 96, 428, 776, 1124, 1444, 1878
BsgI GTGCAG 3 cut(s) 722, 783, 832
Bsh1236I CGCG 1 cut(s) 1555
BshFI GGCC 9 cut(s) 64, 191, 718, 755, 950, 1164, 1502, 1851, 1943
BshNI GGYRCC 2 cut(s) 1479, 2200
BsiHKAI GWGCWC 4 cut(s) 93, 611, 1690, 1696
BsiHKCI CYCGRG 1 cut(s) 1908
BsiSI CCGG 6 cut(s) 20, 65, 168, 569, 1534, 1845
BslI CCNNNNNNNGG 6 cut(s) 102, 1249, 1254, 1601, 2076, 2181
BsmAI GTCTC 6 cut(s) 473, 500, 764, 971, 1468, 1503
BsmBI CGTCTC 3 cut(s) 473, 971, 1503
BsmI GAATGC 3 cut(s) 4, 58, 1822
BsnI GGCC 9 cut(s) 64, 191, 718, 755, 950, 1164, 1502, 1851, 1943
BsoBI CYCGRG 1 cut(s) 1908
Bsp1286I GDGCHC 5 cut(s) 93, 611, 1690, 1696, 2203
Bsp13I TCCGGA 1 cut(s) 1533
Bsp143I GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
Bsp1720I GCTNAGC 1 cut(s) 551
Bsp19I CCATGG 2 cut(s) 750, 1225
BspANI GGCC 9 cut(s) 64, 191, 718, 755, 950, 1164, 1502, 1851, 1943
BspCNI CTCAG 8 cut(s) 531, 543, 582, 760, 825, 1161, 1533, 1632
BspEI TCCGGA 1 cut(s) 1533
BspFNI CGCG 1 cut(s) 1555
BspLI GGNNCC 7 cut(s) 441, 1481, 1503, 1678, 1843, 1942, 2202
BspMI ACCTGC 1 cut(s) 2212
BspOI GCTAGC 1 cut(s) 2234
BspPI GGATC 4 cut(s) 434, 447, 677, 2169
BspT107I GGYRCC 2 cut(s) 1479, 2200
BspTI CTTAAG 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 2040
BsrFI RCCGGY 2 cut(s) 64, 568
BsrI ACTGG 7 cut(s) 279, 1072, 1165, 1853, 1904, 1934, 2135
BssAI RCCGGY 2 cut(s) 64, 568
BssECI CCNNGG 7 cut(s) 156, 225, 750, 1225, 1248, 1497, 1504
BssMI GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
BssSI CACGAG 1 cut(s) 1689
BssT1I CCWWGG 5 cut(s) 156, 225, 750, 1225, 1248
Bst2BI CACGAG 1 cut(s) 1689
Bst2UI CCWGG 4 cut(s) 193, 395, 1377, 1506
Bst4CI ACNGT 6 cut(s) 177, 492, 511, 660, 983, 1631
Bst6I CTCTTC 4 cut(s) 426, 834, 1123, 1601
BstAFI CTTAAG 1 cut(s) 35
BstAPI GCANNNNNTGC 1 cut(s) 2033
BstBAI YACGTR 1 cut(s) 116
BstC8I GCNNGC 3 cut(s) 66, 720, 2232
BstDEI CTNAG 9 cut(s) 261, 539, 551, 590, 768, 833, 1148, 1520, 1619
BstDSI CCRYGG 2 cut(s) 750, 1225
BstEII GGTNACC 1 cut(s) 1903
BstENI CCTNNNNNAGG 1 cut(s) 1247
BstF5I GGATG 6 cut(s) 111, 147, 319, 390, 1281, 1764
BstFNI CGCG 1 cut(s) 1555
BstHHI GCGC 1 cut(s) 2151
BstKTI GATC 6 cut(s) 222, 426, 442, 672, 1337, 2164
BstMAI GTCTC 6 cut(s) 473, 500, 764, 971, 1468, 1503
BstMBI GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
BstMWI GCNNNNNNNGC 9 cut(s) 20, 210, 761, 1857, 1866, 2033, 2042, 2131, 2155
BstNI CCWGG 4 cut(s) 193, 395, 1377, 1506
BstNSI RCATGY 1 cut(s) 1444
BstPI GGTNACC 1 cut(s) 1903
BstSCI CCNGG 4 cut(s) 191, 393, 1375, 1504
BstSLI GKGCMC 1 cut(s) 2203
BstUI CGCG 1 cut(s) 1555
BstV1I GCAGC 6 cut(s) 96, 428, 776, 1124, 1444, 1878
BstV2I GAAGAC 2 cut(s) 275, 633
BstX2I RGATCY 1 cut(s) 439
BstYI RGATCY 1 cut(s) 439
Bsu36I CCTNAGG 1 cut(s) 1148
BsuI GTATCC 2 cut(s) 449, 757
BsuRI GGCC 9 cut(s) 64, 191, 718, 755, 950, 1164, 1502, 1851, 1943
BtgI CCRYGG 2 cut(s) 750, 1225
BtsCI GGATG 6 cut(s) 111, 147, 319, 390, 1281, 1764
BtsIMutI CAGTG 9 cut(s) 337, 370, 516, 656, 988, 1059, 1158, 1528, 1860
BveI ACCTGC 1 cut(s) 2212
Cac8I GCNNGC 3 cut(s) 66, 720, 2232
CaiI CAGNNNCTG 2 cut(s) 538, 562
CfoI GCGC 1 cut(s) 2151
Cfr10I RCCGGY 2 cut(s) 64, 568
Cfr13I GGNCC 8 cut(s) 497, 716, 1163, 1501, 1676, 1850, 1941, 1966
CseI GACGC 2 cut(s) 490, 1561
Csp6I GTAC 9 cut(s) 251, 991, 1180, 1234, 1240, 1258, 1279, 2001, 2097
CspCI CAANNNNNGTGG 6 cut(s) 102, 137, 1979, 2014, 2248, 2283
CviQI GTAC 9 cut(s) 251, 991, 1180, 1234, 1240, 1258, 1279, 2001, 2097
DdeI CTNAG 9 cut(s) 261, 539, 551, 590, 768, 833, 1148, 1520, 1619
DpnI GATC 6 cut(s) 221, 425, 441, 671, 1336, 2163
DpnII GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
EaeI YGGCCR 3 cut(s) 62, 189, 753
Eam1104I CTCTTC 4 cut(s) 426, 834, 1123, 1601
EarI CTCTTC 4 cut(s) 426, 834, 1123, 1601
EciI GGCGGA 2 cut(s) 652, 1973
Ecl136II GAGCTC 2 cut(s) 91, 1694
Eco130I CCWWGG 5 cut(s) 156, 225, 750, 1225, 1248
Eco24I GRGCYC 2 cut(s) 93, 1696
Eco47I GGWCC 3 cut(s) 497, 1676, 1966
Eco53kI GAGCTC 2 cut(s) 91, 1694
Eco57I CTGAAG 5 cut(s) 346, 584, 1402, 2036, 2235
Eco72I CACGTG 1 cut(s) 116
Eco81I CCTNAGG 1 cut(s) 1148
Eco88I CYCGRG 1 cut(s) 1908
Eco91I GGTNACC 1 cut(s) 1903
EcoICRI GAGCTC 2 cut(s) 91, 1694
EcoNI CCTNNNNNAGG 1 cut(s) 1247
EcoO65I GGTNACC 1 cut(s) 1903
EcoRI GAATTC 1 cut(s) 2270
EcoRII CCWGG 4 cut(s) 191, 393, 1375, 1504
EcoT14I CCWWGG 5 cut(s) 156, 225, 750, 1225, 1248
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 93, 1696
ErhI CCWWGG 5 cut(s) 156, 225, 750, 1225, 1248
Esp3I CGTCTC 3 cut(s) 473, 971, 1503
FalI AAGNNNNNCTT 2 cut(s) 254, 286
FauI CCCGC 1 cut(s) 2189
FauNDI CATATG 1 cut(s) 1398
FbaI TGATCA 1 cut(s) 423
FblI GTMKAC 1 cut(s) 2142
FokI GGATG 6 cut(s) 118, 154, 326, 377, 1288, 1751
FriOI GRGCYC 2 cut(s) 93, 1696
FspBI CTAG 6 cut(s) 1109, 1167, 1823, 2004, 2100, 2231
GlaI GCGC 1 cut(s) 2150
HaeIII GGCC 9 cut(s) 64, 191, 718, 755, 950, 1164, 1502, 1851, 1943
HapII CCGG 6 cut(s) 20, 65, 168, 569, 1534, 1845
HgaI GACGC 2 cut(s) 490, 1561
HhaI GCGC 1 cut(s) 2151
Hin6I GCGC 1 cut(s) 2149
HinP1I GCGC 1 cut(s) 2149
HincII GTYRAC 1 cut(s) 376
HindII GTYRAC 1 cut(s) 376
HinfI GANTC 6 cut(s) 215, 275, 327, 1537, 1614, 1808
HpaII CCGG 6 cut(s) 20, 65, 168, 569, 1534, 1845
HphI GGTGA 9 cut(s) 85, 214, 907, 1237, 1322, 1486, 1915, 2033, 2116
Hpy166II GTNNAC 4 cut(s) 376, 1613, 1783, 2143
Hpy188I TCNGA 8 cut(s) 128, 591, 834, 1047, 1421, 1622, 1813, 2291
Hpy188III TCNNGA 9 cut(s) 139, 443, 463, 623, 1150, 1534, 1697, 1876, 2237
Hpy8I GTNNAC 4 cut(s) 376, 1613, 1783, 2143
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 4 cut(s) 72, 1052, 1608, 2012
HpyCH4III ACNGT 6 cut(s) 177, 492, 511, 660, 983, 1631
HpyCH4IV ACGT 2 cut(s) 115, 2029
HpyF10VI GCNNNNNNNGC 9 cut(s) 20, 210, 761, 1857, 1866, 2033, 2042, 2131, 2155
HpyF3I CTNAG 9 cut(s) 261, 539, 551, 590, 768, 833, 1148, 1520, 1619
HpySE526I ACGT 2 cut(s) 115, 2029
HspAI GCGC 1 cut(s) 2149
Kpn2I TCCGGA 1 cut(s) 1533
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Ksp22I TGATCA 1 cut(s) 423
Kzo9I GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
LmnI GCTCC 6 cut(s) 22, 489, 606, 1685, 1745, 1960
Lsp1109I GCAGC 6 cut(s) 96, 428, 776, 1124, 1444, 1878
LweI GCATC 7 cut(s) 96, 144, 172, 213, 1773, 2014, 2160
MaeI CTAG 6 cut(s) 1109, 1167, 1823, 2004, 2100, 2231
MaeII ACGT 2 cut(s) 115, 2029
MaeIII GTNAC 5 cut(s) 983, 1063, 1722, 1903, 2055
MalI GATC 6 cut(s) 221, 425, 441, 671, 1336, 2163
MboI GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
MboII GAAGA 9 cut(s) 275, 336, 350, 443, 638, 821, 1140, 1618, 2228
MfeI CAATTG 1 cut(s) 631
MflI RGATCY 1 cut(s) 439
MhlI GDGCHC 5 cut(s) 93, 611, 1690, 1696, 2203
MlsI TGGCCA 2 cut(s) 191, 755
MluNI TGGCCA 2 cut(s) 191, 755
MlyI GAGTC 3 cut(s) 209, 1531, 1608
MmeI TCCRAC 1 cut(s) 417
Mox20I TGGCCA 2 cut(s) 191, 755
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1533
MroNI GCCGGC 1 cut(s) 64
MscI TGGCCA 2 cut(s) 191, 755
MseI TTAA 8 cut(s) 36, 345, 972, 1103, 1350, 1449, 1563, 1649
MslI CAYNNNNRTG 7 cut(s) 140, 1076, 1474, 1521, 1582, 2045, 2169
Msp20I TGGCCA 2 cut(s) 191, 755
MspA1I CMGCKG 1 cut(s) 767
MspCI CTTAAG 1 cut(s) 35
MspI CCGG 6 cut(s) 20, 65, 168, 569, 1534, 1845
MspR9I CCNGG 4 cut(s) 193, 395, 1377, 1506
MunI CAATTG 1 cut(s) 631
Mva1269I GAATGC 3 cut(s) 4, 58, 1822
MvaI CCWGG 4 cut(s) 193, 395, 1377, 1506
MvnI CGCG 1 cut(s) 1555
MwoI GCNNNNNNNGC 9 cut(s) 20, 210, 761, 1857, 1866, 2033, 2042, 2131, 2155
NaeI GCCGGC 1 cut(s) 66
NcoI CCATGG 2 cut(s) 750, 1225
NdeI CATATG 1 cut(s) 1398
NdeII GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
NgoMIV GCCGGC 1 cut(s) 64
NheI GCTAGC 1 cut(s) 2230
NlaIV GGNNCC 7 cut(s) 441, 1481, 1503, 1678, 1843, 1942, 2202
NmeAIII GCCGAG 1 cut(s) 1478
NmuCI GTSAC 3 cut(s) 983, 1903, 2055
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1444
OliI CACNNNNGTG 1 cut(s) 1521
PaqCI CACCTGC 1 cut(s) 2212
PciI ACATGT 1 cut(s) 1440
PctI GAATGC 3 cut(s) 4, 58, 1822
PdiI GCCGGC 1 cut(s) 66
PfeI GAWTC 3 cut(s) 275, 327, 1808
PflMI CCANNNNNTGG 1 cut(s) 1254
PfoI TCCNGGA 1 cut(s) 1375
PleI GAGTC 3 cut(s) 209, 1531, 1608
PmaCI CACGTG 1 cut(s) 116
PmlI CACGTG 1 cut(s) 116
PpsI GAGTC 3 cut(s) 209, 1531, 1608
Ppu21I YACGTR 1 cut(s) 116
PscI ACATGT 1 cut(s) 1440
PshBI ATTAAT 1 cut(s) 1449
PsiI TTATAA 1 cut(s) 1076
Psp124BI GAGCTC 2 cut(s) 93, 1696
Psp6I CCWGG 4 cut(s) 191, 393, 1375, 1504
PspCI CACGTG 1 cut(s) 116
PspEI GGTNACC 1 cut(s) 1903
PspGI CCWGG 4 cut(s) 191, 393, 1375, 1504
PspN4I GGNNCC 7 cut(s) 441, 1481, 1503, 1678, 1843, 1942, 2202
PspPI GGNCC 8 cut(s) 497, 716, 1163, 1501, 1676, 1850, 1941, 1966
PstNI CAGNNNCTG 2 cut(s) 538, 562
PsuI RGATCY 1 cut(s) 439
PvuII CAGCTG 1 cut(s) 767
RsaI GTAC 9 cut(s) 252, 992, 1181, 1235, 1241, 1259, 1280, 2002, 2098
RsaNI GTAC 9 cut(s) 251, 991, 1180, 1234, 1240, 1258, 1279, 2001, 2097
RseI CAYNNNNRTG 7 cut(s) 140, 1076, 1474, 1521, 1582, 2045, 2169
SacI GAGCTC 2 cut(s) 93, 1696
SaqAI TTAA 8 cut(s) 36, 345, 972, 1103, 1350, 1449, 1563, 1649
Sau3AI GATC 6 cut(s) 219, 423, 439, 669, 1334, 2161
Sau96I GGNCC 8 cut(s) 497, 716, 1163, 1501, 1676, 1850, 1941, 1966
SchI GAGTC 3 cut(s) 209, 1531, 1608
ScrFI CCNGG 4 cut(s) 193, 395, 1377, 1506
SduI GDGCHC 5 cut(s) 93, 611, 1690, 1696, 2203
SfaNI GCATC 7 cut(s) 96, 144, 172, 213, 1773, 2014, 2160
SinI GGWCC 3 cut(s) 497, 1676, 1966
SmiMI CAYNNNNRTG 7 cut(s) 140, 1076, 1474, 1521, 1582, 2045, 2169
SmlI CTYRAG 5 cut(s) 35, 776, 1410, 1695, 1769
SmoI CTYRAG 5 cut(s) 35, 776, 1410, 1695, 1769
SpeI ACTAGT 1 cut(s) 2003
SspMI CTAG 6 cut(s) 1109, 1167, 1823, 2004, 2100, 2231
SstI GAGCTC 2 cut(s) 93, 1696
StyD4I CCNGG 4 cut(s) 191, 393, 1375, 1504
StyI CCWWGG 5 cut(s) 156, 225, 750, 1225, 1248
TaaI ACNGT 6 cut(s) 177, 492, 511, 660, 983, 1631
TaiI ACGT 2 cut(s) 118, 2032
TaqI TCGA 7 cut(s) 84, 180, 218, 273, 1333, 1926, 2082
TatI WGTACW 3 cut(s) 1179, 1278, 2000
TauI GCSGC 3 cut(s) 14, 1833, 1851
TfiI GAWTC 3 cut(s) 275, 327, 1808
Tru1I TTAA 8 cut(s) 36, 345, 972, 1103, 1350, 1449, 1563, 1649
Tru9I TTAA 8 cut(s) 36, 345, 972, 1103, 1350, 1449, 1563, 1649
TscAI CASTG 9 cut(s) 337, 370, 516, 663, 988, 1059, 1165, 1528, 1860
TseFI GTSAC 3 cut(s) 983, 1903, 2055
TseI GCWGC 7 cut(s) 14, 109, 416, 764, 1112, 1457, 1866
Tsp45I GTSAC 3 cut(s) 983, 1903, 2055
TspDTI ATGAA 6 cut(s) 31, 423, 1016, 1385, 1517, 1961
TspGWI ACGGA 1 cut(s) 1320
TspRI CASTG 9 cut(s) 337, 370, 516, 663, 988, 1059, 1165, 1528, 1860
Van91I CCANNNNNTGG 1 cut(s) 1254
Vha464I CTTAAG 1 cut(s) 35
VpaK11BI GGWCC 3 cut(s) 497, 1676, 1966
VspI ATTAAT 1 cut(s) 1449
XagI CCTNNNNNAGG 1 cut(s) 1247
XapI RAATTY 5 cut(s) 288, 909, 1652, 2270, 2284
XceI RCATGY 1 cut(s) 1444
XcmI CCANNNNNNNNNTGG 1 cut(s) 1951
XmiI GTMKAC 1 cut(s) 2142
XspI CTAG 6 cut(s) 1109, 1167, 1823, 2004, 2100, 2231
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.