Rroxscaffold_3G00266570

Respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0004577
Physical Location & Seq
Reverse (-)
59794613 .. 59800506
5894 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00266570.1

Sequence Viewer

Length: 2505 bp
ATGAGGACGAGCACCACCACAACACAGTCGACGACTCGCTCACTCTGCTCGGCGGCGACAGTAAGGCACCCGAAGAGCAACGACCAGTCGTTCGTCCGTACGGCCTCCATACGGATCAAGAAGGAGCTGAAGAAGCTGGCGTCGTTCTCGAAGCAGCCGCAGCAACGGCGCCGTTTAGACCGGATGCAGTCGGCGGCTGCTCCGGCCTTGAAGGGGCTAAAGTTCATAAGCAAAACGGACGGGAATGCGGAGTGGCCGGCGGTCGAGAAAAGGTTCGACAAGCTCACCGGCTCGACCAACGGGATGCTGACTCGTGCGGCGTTCGGGGAGTGCATAGGGATGAACAAAGACTGCAAGGAGTTTGCCGGAAAACTGTTCGATGCTTTGGCCAGGAAGCATGGTATCAAAGGCGACTCGATCAACAAGGAGGAGTTGAAGGAGATGTGGGGACAAGTTTCTGAGCAGGGCTTCAATTCCAGGCTTCAGATTTTCTTTGACATGGTTGACAAGGATGGAGATGGAAGAATCACTGTAGAAGAGGTTAAGGAGATTATTAGCTTCAGTGCTTCTGCCAACAAACTATCAAACATCCAGAAACAAGCAGATGAATATGCAGCATTGATCATGGAAGAGTTGGATCCGGACAATCTTGGATACATCATGATAGAAAGTTTGGAGATGCTCCTACTATATGGACCGCAGGAGACGGTGGTGCGAGGAAAAGAAAGCCGGAACCTGAGCAAAATGATGAGCCAGAAGCTCAAGCCGGTAAGGGAGGACAACCCTCTGAGGAGGTGGTATAGGAGCACCAACTACTTTCTTGAAGACAATTGGCAGAGAGTTTGGGTAATGGCACTGTGGATTGGGATCATGGCTGGTCTATTTGCCTATAAGTTTGTGCAGTATAAAAACAGGGCTGCATATCAAGTAATGGGTCATTGTGTATCCATGGCCAAAGGTGCAGCTGAGACACTCAAGTTCAACATGGCTCTTATTCTACTTCCAGTGTGCAGAAACACTATCACTCTTCTGAGGAACAAGACCAAATTGGGTGTTGCTATTCCTTTTGATGACAACCTCAATTTCCATAAGGTGATAGCTATTGGAATTTCAGTAGGAGTTGGCATACACTCAATTTACCATTTGGCCTGTGATTTCCCTCGTCTCATTAAAGCAGACAGTGACGAGTACGCCCCGATGAAGCAATTTTTTGGGGAACAACCTTCAAACTATTGGTTTTTTCTGAAATCAGTGGAAGGAGTAACTGGCATTATAATGGTAGTGTTGATGACAATAGCCTTCACACTAGCAGCACCGTGTTTTAGAAGAGGTAGGCTCAAGAACCTTCCCCAACCTCTCAAGAGGCTCACAGGCTTCAATGCCTTTTGGTACTCCCATCACCTCTTCGTCATTGTCTATACTTTGCTCATTGTCCATGGAGAGTACCTGTACCTCACCAAGGAATGGTACAAGAAAACGACTTGGATGTACTTGGCTGTTCCGCTTCTCCTTTACGGAGGTGAAAGATTGGTTCGGGCGTTTCGATCTAGCATCAAGGCTGTTAAGATAGTTAAGGTGGCTCTATATCCTGGAAATGTGTTGGCACTTCATATGTCAAAGCCTCAAGGCTTCAGATACCATAGTGGGCAATACATGTTTATTAATTGTGCTGCTGTCTCCCCATTTGAATGGCACCCATTTTCCATCACCTCCGCCCCAGGAGACGACCACCTCAGTGTTCATATCCGGACTCTTGGCGACTGGACGCAACAACTTAAAACAGTATTTTCACAAGTATGCCAACCACCTCCTTCTGGGAAGAGTGGACTCCTCAGAGCCGACTGTGTGCAAGGCAACGACTTAAACTTTCCAAGAGTGCTAATAGATGGACCCTATGGAGCACCAGCTCAAGACTACAAGAAATACGAAGTGGTGTTACTTGTAGGGTTGGGAATAGGAGCAACCCCAATGATAAGCATCCTCAAGGACATAGTAAACAACATCAAAGCCATAGAGGAGGAATCAGAGAATGCCCTAGAAAGCGGCACGGCCGGTTCCGGAGCCCCAGTGAGCCTCCACGGCAACTTCAAGACCAAGAGGGCCTACTTCTATTGGGTGACTCGAGAGCAAGGTTCGTTCGACTGGTTCAAAGGGGCCATGAACGAGGTGGCGGAGCTGGACCATAACAGAGTGATAGAGTTCCACAACTATTGCACTAGTGTTTATGAGGAAGGTGATGCACGTTCTGCTCTCATTGCTATGCTTCAGTCACTCAATCATGCCAAGAATGGGGTCGATATTGTGTCGGGTACTAGGGTGAAGTCACATTTTGCTAAGCCTAACTGGCGTGAGGTCTACAAGCGCATTGCGCTGGATCACACCAATGCCAAAGTTGGGGTGTTCTACTGCGGGCCACCTGCTCTTACTGAAGAACTACGACAGCTAGCTCTGGATTTCAACCACAAAACCTCCACCAGATTTGAATTCCATAAAGAAAATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

834

Amino Acids

94.4

Weight (kDa)

9.32

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 58 - 159 1.1e-34 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 159 - 220 1.4e-06 EF-hand domain pair
Ferric_reduct PF01794 329 - 476 7.2e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 519 - 636 4.3e-36 FAD-binding domain
NAD_binding_6 PF08030 642 - 816 2e-50 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1274
AarI CACCTGC 1 cut(s) 2425
Acc36I ACCTGC 1 cut(s) 2425
AccB1I GGYRCC 3 cut(s) 66, 168, 1692
AccB7I CCANNNNNTGG 1 cut(s) 1464
AccI GTMKAC 2 cut(s) 29, 2355
AccIII TCCGGA 3 cut(s) 640, 1746, 2057
AclWI GGATC 5 cut(s) 122, 632, 645, 875, 2382
AcoI YGGCCR 4 cut(s) 254, 387, 951, 2049
AcsI RAATTY 3 cut(s) 1107, 2483, 2497
AcuI CTGAAG 6 cut(s) 149, 467, 544, 1615, 2249, 2448
AcyI GRCGYC 2 cut(s) 140, 169
AfaI GTAC 8 cut(s) 100, 1190, 1391, 1445, 1451, 1469, 1490, 2311
AfiI CCNNNNNNNGG 7 cut(s) 111, 213, 1459, 1464, 1814, 2289, 2394
AflIII ACRYGT 1 cut(s) 1653
AhlI ACTAGT 1 cut(s) 2216
AjnI CCWGG 4 cut(s) 389, 476, 1588, 1717
AleI CACNNNNGTG 1 cut(s) 1734
Alw21I GWGCWC 3 cut(s) 14, 809, 1903
Alw26I GTCTC 5 cut(s) 698, 962, 1169, 1681, 1716
AlwI GGATC 5 cut(s) 122, 632, 645, 875, 2382
Ama87I CYCGRG 1 cut(s) 2121
Aor13HI TCCGGA 3 cut(s) 640, 1746, 2057
ApeKI GCWGC 8 cut(s) 154, 160, 197, 614, 917, 962, 1310, 1670
ApoI RAATTY 3 cut(s) 1107, 2483, 2497
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
AseI ATTAAT 1 cut(s) 1662
Asp700I GAANNNNTTC 1 cut(s) 272
AspLEI GCGC 3 cut(s) 171, 2364, 2371
AspS9I GGNCC 6 cut(s) 695, 1889, 2100, 2154, 2179, 2411
AsuHPI GGTGA 9 cut(s) 277, 1105, 1391, 1447, 1532, 1699, 2128, 2246, 2329
AsuNHI GCTAGC 1 cut(s) 2443
AvaI CYCGRG 1 cut(s) 2121
AvaII GGWCC 3 cut(s) 695, 1889, 2179
BaeI ACNNNNGTAYC 4 cut(s) 1627, 1660, 2301, 2334
BalI TGGCCA 2 cut(s) 389, 953
BamHI GGATCC 1 cut(s) 637
BanI GGYRCC 3 cut(s) 66, 168, 1692
BanII GRGCYC 1 cut(s) 2065
BarI GAAGNNNNNNTAC 2 cut(s) 1920, 1952
BauI CACGAG 1 cut(s) 312
BbsI GAAGAC 1 cut(s) 831
Bbv12I GWGCWC 3 cut(s) 14, 809, 1903
BbvI GCAGC 8 cut(s) 166, 172, 184, 626, 904, 974, 1322, 1657
BccI CCATC 5 cut(s) 506, 512, 1404, 1712, 1880
BceAI ACGGC 5 cut(s) 117, 156, 182, 2064, 2095
BciT130I CCWGG 4 cut(s) 391, 478, 1590, 1719
BciVI GTATCC 2 cut(s) 647, 955
BclI TGATCA 1 cut(s) 621
BcoDI GTCTC 5 cut(s) 698, 962, 1169, 1681, 1716
BcuI ACTAGT 1 cut(s) 2216
BfaI CTAG 6 cut(s) 1307, 1548, 2036, 2217, 2313, 2444
BfmI CTRYAG 1 cut(s) 531
BfoI RGCGCY 1 cut(s) 172
BfuAI ACCTGC 1 cut(s) 2425
BfuI GTATCC 2 cut(s) 647, 955
BglI GCCNNNNNGGC 2 cut(s) 2079, 2344
BlpI GCTNAGC 1 cut(s) 2334
Bme1390I CCNGG 4 cut(s) 391, 478, 1590, 1719
Bme18I GGWCC 3 cut(s) 695, 1889, 2179
BmeT110I CYCGRG 1 cut(s) 2121
BmgT120I GGNCC 6 cut(s) 695, 1889, 2100, 2154, 2179, 2411
BmiI GGNNCC 9 cut(s) 68, 170, 639, 734, 1694, 1891, 2056, 2062, 2155
BmrFI CCNGG 4 cut(s) 391, 478, 1590, 1719
BmrI ACTGGG 1 cut(s) 2060
BmsI GCATC 7 cut(s) 174, 294, 370, 669, 1560, 1986, 2227
BmtI GCTAGC 1 cut(s) 2447
BmuI ACTGGG 1 cut(s) 2060
BpiI GAAGAC 1 cut(s) 831
BplI GAGNNNNNCTC 2 cut(s) 1320, 1352
Bpu10I CCTNAGC 1 cut(s) 737
Bpu1102I GCTNAGC 1 cut(s) 2334
BpuEI CTTGAG 7 cut(s) 746, 959, 1322, 1343, 1608, 1893, 1967
BsaBI GATNNNNATC 2 cut(s) 866, 1976
BsaHI GRCGYC 2 cut(s) 140, 169
BsaJI CCNNGG 5 cut(s) 948, 1435, 1458, 1717, 2077
BsaWI WCCGGW 4 cut(s) 180, 640, 1746, 2057
BsaXI ACNNNNNCTCC 4 cut(s) 2052, 2082, 2453, 2483
Bsc4I CCNNNNNNNGG 7 cut(s) 111, 213, 1459, 1464, 1814, 2289, 2394
Bse118I RCCGGY 4 cut(s) 256, 287, 766, 2051
Bse1I ACTGG 7 cut(s) 85, 1004, 1270, 1766, 2066, 2147, 2348
Bse3DI GCAATG 2 cut(s) 2253, 2364
Bse8I GATNNNNATC 2 cut(s) 866, 1976
BseAI TCCGGA 3 cut(s) 640, 1746, 2057
BseBI CCWGG 4 cut(s) 391, 478, 1590, 1719
BseDI CCNNGG 5 cut(s) 948, 1435, 1458, 1717, 2077
BseGI GGATG 7 cut(s) 189, 309, 345, 517, 588, 1491, 1977
BseJI GATNNNNATC 2 cut(s) 866, 1976
BseLI CCNNNNNNNGG 7 cut(s) 111, 213, 1459, 1464, 1814, 2289, 2394
BseMI GCAATG 2 cut(s) 2253, 2364
BseMII CTCAG 7 cut(s) 450, 728, 779, 957, 1022, 1747, 1846
BseNI ACTGG 7 cut(s) 85, 1004, 1270, 1766, 2066, 2147, 2348
BseRI GAGGAG 4 cut(s) 443, 805, 1820, 2030
BseX3I CGGCCG 1 cut(s) 2049
BseXI GCAGC 8 cut(s) 166, 172, 184, 626, 904, 974, 1322, 1657
BsgI GTGCAG 3 cut(s) 920, 981, 1030
Bsh1285I CGRYCG 2 cut(s) 264, 2052
BshNI GGYRCC 3 cut(s) 66, 168, 1692
BsiEI CGRYCG 2 cut(s) 264, 2052
BsiHKAI GWGCWC 3 cut(s) 14, 809, 1903
BsiHKCI CYCGRG 1 cut(s) 2121
BsiWI CGTACG 1 cut(s) 98
BslFI GGGAC 1 cut(s) 462
BslI CCNNNNNNNGG 7 cut(s) 111, 213, 1459, 1464, 1814, 2289, 2394
BsmAI GTCTC 5 cut(s) 698, 962, 1169, 1681, 1716
BsmBI CGTCTC 3 cut(s) 698, 1169, 1716
BsmFI GGGAC 1 cut(s) 462
BsmI GAATGC 2 cut(s) 250, 2035
BsoBI CYCGRG 1 cut(s) 2121
Bsp1286I GDGCHC 4 cut(s) 14, 809, 1903, 2065
Bsp13I TCCGGA 3 cut(s) 640, 1746, 2057
Bsp143I GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
Bsp1720I GCTNAGC 1 cut(s) 2334
Bsp19I CCATGG 2 cut(s) 948, 1435
BspCNI CTCAG 7 cut(s) 451, 729, 780, 958, 1023, 1746, 1845
BspEI TCCGGA 3 cut(s) 640, 1746, 2057
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 9 cut(s) 68, 170, 639, 734, 1694, 1891, 2056, 2062, 2155
BspMI ACCTGC 1 cut(s) 2425
BspOI GCTAGC 1 cut(s) 2447
BspPI GGATC 5 cut(s) 122, 632, 645, 875, 2382
BspQI GCTCTTC 1 cut(s) 68
BspT107I GGYRCC 3 cut(s) 66, 168, 1692
BsrDI GCAATG 2 cut(s) 2253, 2364
BsrFI RCCGGY 4 cut(s) 256, 287, 766, 2051
BsrI ACTGG 7 cut(s) 85, 1004, 1270, 1766, 2066, 2147, 2348
BssAI RCCGGY 4 cut(s) 256, 287, 766, 2051
BssECI CCNNGG 5 cut(s) 948, 1435, 1458, 1717, 2077
BssMI GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
BssNI GRCGYC 2 cut(s) 140, 169
BssSI CACGAG 1 cut(s) 312
BssT1I CCWWGG 3 cut(s) 948, 1435, 1458
Bst2BI CACGAG 1 cut(s) 312
Bst2UI CCWGG 4 cut(s) 391, 478, 1590, 1719
Bst6I CTCTTC 7 cut(s) 68, 531, 624, 1032, 1321, 1409, 1814
BstACI GRCGYC 2 cut(s) 140, 169
BstAPI GCANNNNNTGC 1 cut(s) 2246
BstC8I GCNNGC 4 cut(s) 138, 258, 2411, 2445
BstDEI CTNAG 8 cut(s) 459, 737, 788, 966, 1031, 1733, 1832, 2334
BstDSI CCRYGG 3 cut(s) 948, 1435, 2077
BstENI CCTNNNNNAGG 1 cut(s) 1457
BstF5I GGATG 7 cut(s) 189, 309, 345, 517, 588, 1491, 1977
BstH2I RGCGCY 1 cut(s) 172
BstHHI GCGC 3 cut(s) 171, 2364, 2371
BstKTI GATC 7 cut(s) 117, 420, 624, 640, 870, 1547, 2377
BstMAI GTCTC 5 cut(s) 698, 962, 1169, 1681, 1716
BstMBI GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
BstMCI CGRYCG 2 cut(s) 264, 2052
BstNI CCWGG 4 cut(s) 391, 478, 1590, 1719
BstNSI RCATGY 1 cut(s) 1657
BstSCI CCNGG 4 cut(s) 389, 476, 1588, 1717
BstSFI CTRYAG 1 cut(s) 531
BstV1I GCAGC 8 cut(s) 166, 172, 184, 626, 904, 974, 1322, 1657
BstV2I GAAGAC 1 cut(s) 831
BstX2I RGATCY 1 cut(s) 637
BstXI CCANNNNNNTGG 1 cut(s) 1689
BstYI RGATCY 1 cut(s) 637
BstZI CGGCCG 1 cut(s) 2049
BsuI GTATCC 2 cut(s) 647, 955
BtgI CCRYGG 3 cut(s) 948, 1435, 2077
BtsCI GGATG 7 cut(s) 189, 309, 345, 517, 588, 1491, 1977
BtsIMutI CAGTG 8 cut(s) 528, 568, 854, 1011, 1186, 1257, 1741, 2073
BveI ACCTGC 1 cut(s) 2425
Cac8I GCNNGC 4 cut(s) 138, 258, 2411, 2445
CciI TCATGA 1 cut(s) 660
CfoI GCGC 3 cut(s) 171, 2364, 2371
Cfr10I RCCGGY 4 cut(s) 256, 287, 766, 2051
Cfr13I GGNCC 6 cut(s) 695, 1889, 2100, 2154, 2179, 2411
CseI GACGC 2 cut(s) 129, 1774
Csp6I GTAC 8 cut(s) 99, 1189, 1390, 1444, 1450, 1468, 1489, 2310
CspCI CAANNNNNGTGG 4 cut(s) 2192, 2227, 2461, 2496
CviQI GTAC 8 cut(s) 99, 1189, 1390, 1444, 1450, 1468, 1489, 2310
DdeI CTNAG 8 cut(s) 459, 737, 788, 966, 1031, 1733, 1832, 2334
DinI GGCGCC 1 cut(s) 170
DpnI GATC 7 cut(s) 116, 419, 623, 639, 869, 1546, 2376
DpnII GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
EaeI YGGCCR 4 cut(s) 254, 387, 951, 2049
EagI CGGCCG 1 cut(s) 2049
Eam1104I CTCTTC 7 cut(s) 68, 531, 624, 1032, 1321, 1409, 1814
EarI CTCTTC 7 cut(s) 68, 531, 624, 1032, 1321, 1409, 1814
EciI GGCGGA 2 cut(s) 1702, 2186
EclXI CGGCCG 1 cut(s) 2049
Eco130I CCWWGG 3 cut(s) 948, 1435, 1458
Eco24I GRGCYC 1 cut(s) 2065
Eco47I GGWCC 3 cut(s) 695, 1889, 2179
Eco52I CGGCCG 1 cut(s) 2049
Eco57I CTGAAG 6 cut(s) 149, 467, 544, 1615, 2249, 2448
Eco88I CYCGRG 1 cut(s) 2121
EcoNI CCTNNNNNAGG 1 cut(s) 1457
EcoO109I RGGNCCY 1 cut(s) 2100
EcoRI GAATTC 1 cut(s) 2483
EcoRII CCWGG 4 cut(s) 389, 476, 1588, 1717
EcoT14I CCWWGG 3 cut(s) 948, 1435, 1458
EcoT38I GRGCYC 1 cut(s) 2065
EgeI GGCGCC 1 cut(s) 170
EheI GGCGCC 1 cut(s) 170
ErhI CCWWGG 3 cut(s) 948, 1435, 1458
Esp3I CGTCTC 3 cut(s) 698, 1169, 1716
FaqI GGGAC 1 cut(s) 462
FauI CCCGC 1 cut(s) 2402
FauNDI CATATG 1 cut(s) 1611
FbaI TGATCA 1 cut(s) 621
FblI GTMKAC 2 cut(s) 29, 2355
FokI GGATG 7 cut(s) 196, 316, 352, 524, 575, 1498, 1964
FriOI GRGCYC 1 cut(s) 2065
FspBI CTAG 6 cut(s) 1307, 1548, 2036, 2217, 2313, 2444
GlaI GCGC 3 cut(s) 170, 2363, 2370
HaeII RGCGCY 1 cut(s) 172
HgaI GACGC 2 cut(s) 129, 1774
HhaI GCGC 3 cut(s) 171, 2364, 2371
Hin1I GRCGYC 2 cut(s) 140, 169
Hin6I GCGC 3 cut(s) 169, 2362, 2369
HinP1I GCGC 3 cut(s) 169, 2362, 2369
HincII GTYRAC 2 cut(s) 30, 505
HindII GTYRAC 2 cut(s) 30, 505
HinfI GANTC 8 cut(s) 34, 310, 413, 525, 1750, 1827, 2021, 2119
HphI GGTGA 9 cut(s) 277, 1105, 1391, 1447, 1532, 1699, 2128, 2246, 2329
Hpy166II GTNNAC 5 cut(s) 30, 505, 1826, 1996, 2356
Hpy188I TCNGA 8 cut(s) 460, 486, 789, 1032, 1245, 1634, 1835, 2026
Hpy8I GTNNAC 5 cut(s) 30, 505, 1826, 1996, 2356
Hpy99I CGWCG 2 cut(s) 34, 145
HpyAV CCTTC 9 cut(s) 115, 205, 430, 1233, 1250, 1309, 1355, 1821, 2225
HpyCH4IV ACGT 1 cut(s) 2242
HpyF3I CTNAG 8 cut(s) 459, 737, 788, 966, 1031, 1733, 1832, 2334
HpySE526I ACGT 1 cut(s) 2242
Hsp92I GRCGYC 2 cut(s) 140, 169
HspAI GCGC 3 cut(s) 169, 2362, 2369
KasI GGCGCC 1 cut(s) 168
Kpn2I TCCGGA 3 cut(s) 640, 1746, 2057
KroI GCCGGC 1 cut(s) 256
KroNI GCCGGC 1 cut(s) 258
Ksp22I TGATCA 1 cut(s) 621
Kzo9I GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
LguI GCTCTTC 1 cut(s) 68
LmnI GCTCC 8 cut(s) 124, 205, 687, 804, 1898, 1958, 2060, 2173
Lsp1109I GCAGC 8 cut(s) 166, 172, 184, 626, 904, 974, 1322, 1657
LweI GCATC 7 cut(s) 174, 294, 370, 669, 1560, 1986, 2227
MaeI CTAG 6 cut(s) 1307, 1548, 2036, 2217, 2313, 2444
MaeII ACGT 1 cut(s) 2242
MaeIII GTNAC 6 cut(s) 1181, 1261, 1935, 2116, 2268, 2322
MalI GATC 7 cut(s) 116, 419, 623, 639, 869, 1546, 2376
MboI GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
MfeI CAATTG 1 cut(s) 829
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 4 cut(s) 14, 809, 1903, 2065
MlsI TGGCCA 2 cut(s) 389, 953
MluNI TGGCCA 2 cut(s) 389, 953
Mly113I GGCGCC 1 cut(s) 169
MlyI GAGTC 6 cut(s) 28, 304, 407, 1744, 1821, 2113
MmeI TCCRAC 1 cut(s) 615
Mox20I TGGCCA 2 cut(s) 389, 953
MroI TCCGGA 3 cut(s) 640, 1746, 2057
MroNI GCCGGC 1 cut(s) 256
MroXI GAANNNNTTC 1 cut(s) 272
MscI TGGCCA 2 cut(s) 389, 953
MseI TTAA 7 cut(s) 543, 1170, 1563, 1572, 1662, 1776, 1862
MslI CAYNNNNRTG 7 cut(s) 338, 1274, 1687, 1734, 1795, 2258, 2382
Msp20I TGGCCA 2 cut(s) 389, 953
MspA1I CMGCKG 1 cut(s) 965
MspR9I CCNGG 4 cut(s) 391, 478, 1590, 1719
MunI CAATTG 1 cut(s) 829
Mva1269I GAATGC 2 cut(s) 250, 2035
MvaI CCWGG 4 cut(s) 391, 478, 1590, 1719
NaeI GCCGGC 1 cut(s) 258
NarI GGCGCC 1 cut(s) 169
NcoI CCATGG 2 cut(s) 948, 1435
NdeI CATATG 1 cut(s) 1611
NdeII GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
NgoMIV GCCGGC 1 cut(s) 256
NheI GCTAGC 1 cut(s) 2443
NlaIV GGNNCC 9 cut(s) 68, 170, 639, 734, 1694, 1891, 2056, 2062, 2155
NmeAIII GCCGAG 1 cut(s) 29
NmuCI GTSAC 4 cut(s) 1181, 2116, 2268, 2322
NspI RCATGY 1 cut(s) 1657
OliI CACNNNNGTG 1 cut(s) 1734
PaeR7I CTCGAG 1 cut(s) 2121
PagI TCATGA 1 cut(s) 660
PaqCI CACCTGC 1 cut(s) 2425
PciI ACATGT 1 cut(s) 1653
PciSI GCTCTTC 1 cut(s) 68
PcsI WCGNNNNNNNCGW 1 cut(s) 1540
PctI GAATGC 2 cut(s) 250, 2035
PdiI GCCGGC 1 cut(s) 258
PdmI GAANNNNTTC 1 cut(s) 272
PfeI GAWTC 2 cut(s) 525, 2021
Pfl23II CGTACG 1 cut(s) 98
PflMI CCANNNNNTGG 1 cut(s) 1464
PfoI TCCNGGA 1 cut(s) 1588
PleI GAGTC 6 cut(s) 28, 304, 407, 1744, 1821, 2113
PluTI GGCGCC 1 cut(s) 172
PpsI GAGTC 6 cut(s) 28, 304, 407, 1744, 1821, 2113
PscI ACATGT 1 cut(s) 1653
PshBI ATTAAT 1 cut(s) 1662
PsiI TTATAA 1 cut(s) 1274
Psp6I CCWGG 4 cut(s) 389, 476, 1588, 1717
PspGI CCWGG 4 cut(s) 389, 476, 1588, 1717
PspLI CGTACG 1 cut(s) 98
PspN4I GGNNCC 9 cut(s) 68, 170, 639, 734, 1694, 1891, 2056, 2062, 2155
PspPI GGNCC 6 cut(s) 695, 1889, 2100, 2154, 2179, 2411
PsuI RGATCY 1 cut(s) 637
PvuII CAGCTG 1 cut(s) 965
RsaI GTAC 8 cut(s) 100, 1190, 1391, 1445, 1451, 1469, 1490, 2311
RsaNI GTAC 8 cut(s) 99, 1189, 1390, 1444, 1450, 1468, 1489, 2310
RseI CAYNNNNRTG 7 cut(s) 338, 1274, 1687, 1734, 1795, 2258, 2382
SalI GTCGAC 1 cut(s) 28
SapI GCTCTTC 1 cut(s) 68
SaqAI TTAA 7 cut(s) 543, 1170, 1563, 1572, 1662, 1776, 1862
Sau3AI GATC 7 cut(s) 114, 417, 621, 637, 867, 1544, 2374
Sau96I GGNCC 6 cut(s) 695, 1889, 2100, 2154, 2179, 2411
SchI GAGTC 6 cut(s) 28, 304, 407, 1744, 1821, 2113
ScrFI CCNGG 4 cut(s) 391, 478, 1590, 1719
SduI GDGCHC 4 cut(s) 14, 809, 1903, 2065
SfaNI GCATC 7 cut(s) 174, 294, 370, 669, 1560, 1986, 2227
SfcI CTRYAG 1 cut(s) 531
SfoI GGCGCC 1 cut(s) 170
Sfr274I CTCGAG 1 cut(s) 2121
SinI GGWCC 3 cut(s) 695, 1889, 2179
SlaI CTCGAG 1 cut(s) 2121
SmiMI CAYNNNNRTG 7 cut(s) 338, 1274, 1687, 1734, 1795, 2258, 2382
SmlI CTYRAG 8 cut(s) 761, 974, 1337, 1358, 1623, 1908, 1982, 2121
SmoI CTYRAG 8 cut(s) 761, 974, 1337, 1358, 1623, 1908, 1982, 2121
SpeI ACTAGT 1 cut(s) 2216
SspDI GGCGCC 1 cut(s) 168
SspMI CTAG 6 cut(s) 1307, 1548, 2036, 2217, 2313, 2444
StyD4I CCNGG 4 cut(s) 389, 476, 1588, 1717
StyI CCWWGG 3 cut(s) 948, 1435, 1458
TaiI ACGT 1 cut(s) 2245
TatI WGTACW 1 cut(s) 1488
TauI GCSGC 5 cut(s) 56, 160, 197, 320, 2046
TfiI GAWTC 2 cut(s) 525, 2021
Tru1I TTAA 7 cut(s) 543, 1170, 1563, 1572, 1662, 1776, 1862
Tru9I TTAA 7 cut(s) 543, 1170, 1563, 1572, 1662, 1776, 1862
TscAI CASTG 8 cut(s) 535, 568, 861, 1011, 1186, 1257, 1741, 2073
TseFI GTSAC 4 cut(s) 1181, 2116, 2268, 2322
TseI GCWGC 8 cut(s) 154, 160, 197, 614, 917, 962, 1310, 1670
Tsp45I GTSAC 4 cut(s) 1181, 2116, 2268, 2322
TspDTI ATGAA 7 cut(s) 214, 356, 621, 1214, 1598, 1730, 2174
TspGWI ACGGA 4 cut(s) 86, 127, 251, 1530
TspRI CASTG 8 cut(s) 535, 568, 861, 1011, 1186, 1257, 1741, 2073
Van91I CCANNNNNTGG 1 cut(s) 1464
VpaK11BI GGWCC 3 cut(s) 695, 1889, 2179
VspI ATTAAT 1 cut(s) 1662
XagI CCTNNNNNAGG 1 cut(s) 1457
XapI RAATTY 3 cut(s) 1107, 2483, 2497
XceI RCATGY 1 cut(s) 1657
XcmI CCANNNNNNNNNTGG 1 cut(s) 2164
XhoI CTCGAG 1 cut(s) 2121
XmiI GTMKAC 2 cut(s) 29, 2355
XmnI GAANNNNTTC 1 cut(s) 272
XspI CTAG 6 cut(s) 1307, 1548, 2036, 2217, 2313, 2444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.