AT4G26070

kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006526
Physical Location & Seq
Forward (+)
13217475 .. 13219936
2462 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26070.4

Sequence Viewer

Length: 927 bp
ATGAACAGAGGAAGCTTATGCCCTAATCCCATCTGTCTCCCTCCTCTTGAGCAATCCATCTCCAAATTCTTAACACAGAGTGGAACGTTTAAAGATGGAGATCTTCGAGTGAACAAAGATGGAATCCAGACCGTGTCTCTGTCCGAACCAGGAGCTCCACCTCCTATTGAGCCATTGGACAACCAATTGAGTTTGGCAGATTTAGAAGTGATCAAAGTCATTGGCAAAGGAAGTAGTGGTAATGTCCAGTTGGTCAAACACAAACTCACTCAACAGTTTTTCGCTCTTAAGGTCATTCAATTGAACACAGAAGAATCAACATGTCGGGCGATTTCTCAGGAGCTGAGAATAAACTTGAGCTCGCAATGTCCATATCTTGTCTCATGTTATCAATCTTTCTACCACAACGGTCTTGTTTCAATCATATTGGAATTCATGGATGGTGGATCCCTTGCAGACTTGTTAAAGAAAGTCGGAAAAGTTCCTGAAAACATGCTATCTGCCATCTGCAAGCGAGTTCTTCGAGGTCTTTGTTATATTCATCATGAGAGGCGAATCATTCATCGGGACTTAAAGCCTTCAAACTTGCTAATCAATCATAGAGGTGAAGTCAAGATCACAGACTTTGGTGTCAGCAAGATCTTGACAAGCACAAGTAGTCTTGCTAATTCTTTCGTGGGCACATACCCTTATATGTCTCCAGAGAGAATCAGCGGGAGTTTGTACAGTAACAAGAGCGATATTTGGAGCTTGGGACTGGTTTTGCTCGAATGTGCAACGGGTAAATTCCCGTATACTCCTCCAGAACACAAGAAAGGATGGAGTAGCGTGTACGAGCTTGTGGACGCCATTGTTGAAAACCCGCCTCCTTGTGCACCTTCCAATCTCTTTTCTCCAGAGTTTTGCTCCTTCATCTCGCAATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000187 GO:0000302 GO:0001101 GO:0001932 GO:0001934 GO:0002237 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004708 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009636 GO:0009814 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0042542 GO:0042742 GO:0043085 GO:0043170 GO:0043207 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045087 GO:0045859 GO:0045860 GO:0045937 GO:0046677 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0098542 GO:0140096 GO:1901564 GO:1901700 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

308

Amino Acids

34.09

Weight (kDa)

7.99

Isoelectric Point (pI)

46.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 68 - 327 2.1e-68 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 68 - 323 2.7e-38 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 140 - 215 5.8e-06 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 629
AccI GTMKAC 1 cut(s) 794
AciI CCGC 2 cut(s) 714, 863
AclI AACGTT 1 cut(s) 86
AclWI GGATC 2 cut(s) 441, 454
AcsI RAATTY 3 cut(s) 65, 431, 785
AcyI GRCGYC 1 cut(s) 846
AdeI CACNNNGTG 1 cut(s) 80
AfaI GTAC 2 cut(s) 725, 833
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 320
AgsI TTSAA 5 cut(s) 299, 304, 420, 582, 857
AjnI CCWGG 1 cut(s) 148
AluBI AGCT 6 cut(s) 15, 155, 343, 360, 750, 838
AluI AGCT 6 cut(s) 15, 155, 343, 360, 750, 838
Alw21I GWGCWC 3 cut(s) 157, 362, 877
Alw26I GTCTC 4 cut(s) 41, 141, 385, 702
Alw44I GTGCAC 1 cut(s) 873
AlwI GGATC 2 cut(s) 441, 454
AlwNI CAGNNNCTG 1 cut(s) 343
ApaLI GTGCAC 1 cut(s) 873
ApoI RAATTY 3 cut(s) 65, 431, 785
AsuHPI GGTGA 1 cut(s) 617
BaeGI GKGCMC 2 cut(s) 683, 877
BamHI GGATCC 1 cut(s) 446
BanII GRGCYC 2 cut(s) 157, 362
Bbv12I GWGCWC 3 cut(s) 157, 362, 877
BccI CCATC 7 cut(s) 38, 65, 89, 113, 434, 512, 813
BciT130I CCWGG 1 cut(s) 150
BclI TGATCA 1 cut(s) 210
BcoDI GTCTC 4 cut(s) 41, 141, 385, 702
BfrI CTTAAG 1 cut(s) 287
BglII AGATCT 2 cut(s) 100, 639
Bme1390I CCNGG 1 cut(s) 150
BmiI GGNNCC 1 cut(s) 448
BmrFI CCNGG 1 cut(s) 150
BplI GAGNNNNNCTC 2 cut(s) 890, 922
BpmI CTGGAG 3 cut(s) 684, 786, 879
BpuEI CTTGAG 2 cut(s) 68, 376
BsaBI GATNNNNATC 1 cut(s) 99
BsaHI GRCGYC 1 cut(s) 846
Bse1I ACTGG 2 cut(s) 247, 762
Bse3DI GCAATG 2 cut(s) 371, 926
Bse8I GATNNNNATC 1 cut(s) 99
BseBI CCWGG 1 cut(s) 150
BseGI GGATG 2 cut(s) 445, 824
BseJI GATNNNNATC 1 cut(s) 99
BseMI GCAATG 2 cut(s) 371, 926
BseMII CTCAG 2 cut(s) 335, 350
BseNI ACTGG 2 cut(s) 247, 762
BseRI GAGGAG 2 cut(s) 33, 789
BseSI GKGCMC 2 cut(s) 683, 877
BsiHKAI GWGCWC 3 cut(s) 157, 362, 877
BslFI GGGAC 2 cut(s) 581, 768
BsmAI GTCTC 4 cut(s) 41, 141, 385, 702
BsmFI GGGAC 2 cut(s) 581, 768
Bsp1286I GDGCHC 4 cut(s) 157, 362, 683, 877
Bsp1407I TGTACA 1 cut(s) 723
Bsp143I GATC 5 cut(s) 100, 210, 446, 615, 639
BspACI CCGC 2 cut(s) 714, 863
BspCNI CTCAG 2 cut(s) 336, 349
BspHI TCATGA 1 cut(s) 544
BspLI GGNNCC 1 cut(s) 448
BspPI GGATC 2 cut(s) 441, 454
BspTI CTTAAG 1 cut(s) 287
BsrDI GCAATG 2 cut(s) 371, 926
BsrGI TGTACA 1 cut(s) 723
BsrI ACTGG 2 cut(s) 247, 762
BssMI GATC 5 cut(s) 100, 210, 446, 615, 639
BssNAI GTATAC 1 cut(s) 795
BssNI GRCGYC 1 cut(s) 846
Bst1107I GTATAC 1 cut(s) 795
Bst2UI CCWGG 1 cut(s) 150
Bst4CI ACNGT 4 cut(s) 133, 276, 410, 728
BstACI GRCGYC 1 cut(s) 846
BstAFI CTTAAG 1 cut(s) 287
BstAUI TGTACA 1 cut(s) 723
BstC8I GCNNGC 2 cut(s) 362, 512
BstDEI CTNAG 2 cut(s) 336, 344
BstF5I GGATG 2 cut(s) 445, 824
BstKTI GATC 5 cut(s) 103, 213, 449, 618, 642
BstMAI GTCTC 4 cut(s) 41, 141, 385, 702
BstMBI GATC 5 cut(s) 100, 210, 446, 615, 639
BstNI CCWGG 1 cut(s) 150
BstNSI RCATGY 2 cut(s) 324, 496
BstSCI CCNGG 1 cut(s) 148
BstSLI GKGCMC 2 cut(s) 683, 877
BstX2I RGATCY 3 cut(s) 100, 446, 639
BstYI RGATCY 3 cut(s) 100, 446, 639
BstZ17I GTATAC 1 cut(s) 795
BtsCI GGATG 2 cut(s) 445, 824
Cac8I GCNNGC 2 cut(s) 362, 512
CaiI CAGNNNCTG 1 cut(s) 343
CciI TCATGA 1 cut(s) 544
CseI GACGC 1 cut(s) 854
Csp6I GTAC 2 cut(s) 724, 832
CviAII CATG 5 cut(s) 321, 384, 436, 493, 545
CviJI RGCY 8 cut(s) 15, 155, 172, 343, 360, 577, 750, 838
CviKI_1 RGCY 8 cut(s) 15, 155, 172, 343, 360, 577, 750, 838
CviQI GTAC 2 cut(s) 724, 832
DdeI CTNAG 2 cut(s) 336, 344
DpnI GATC 5 cut(s) 102, 212, 448, 617, 641
DpnII GATC 5 cut(s) 100, 210, 446, 615, 639
DraI TTTAAA 1 cut(s) 91
DraIII CACNNNGTG 1 cut(s) 80
DrdI GACNNNNNNGTC 1 cut(s) 629
DseDI GACNNNNNNGTC 1 cut(s) 629
Ecl136II GAGCTC 2 cut(s) 155, 360
Eco24I GRGCYC 2 cut(s) 157, 362
Eco53kI GAGCTC 2 cut(s) 155, 360
EcoICRI GAGCTC 2 cut(s) 155, 360
EcoRI GAATTC 1 cut(s) 431
EcoRII CCWGG 1 cut(s) 148
EcoT38I GRGCYC 2 cut(s) 157, 362
FaeI CATG 5 cut(s) 324, 387, 439, 496, 548
FaqI GGGAC 2 cut(s) 581, 768
FatI CATG 5 cut(s) 320, 383, 435, 492, 544
FauI CCCGC 2 cut(s) 707, 870
FbaI TGATCA 1 cut(s) 210
FblI GTMKAC 1 cut(s) 794
FokI GGATG 2 cut(s) 452, 831
FriOI GRGCYC 2 cut(s) 157, 362
GsuI CTGGAG 3 cut(s) 684, 786, 879
HgaI GACGC 1 cut(s) 854
Hin1I GRCGYC 1 cut(s) 846
Hin1II CATG 5 cut(s) 324, 387, 439, 496, 548
HindIII AAGCTT 1 cut(s) 13
HinfI GANTC 4 cut(s) 123, 314, 555, 708
HphI GGTGA 1 cut(s) 617
Hpy166II GTNNAC 5 cut(s) 112, 795, 832, 844, 875
Hpy188I TCNGA 2 cut(s) 145, 476
Hpy8I GTNNAC 5 cut(s) 112, 795, 832, 844, 875
HpyAV CCTTC 3 cut(s) 588, 888, 919
HpyCH4III ACNGT 4 cut(s) 133, 276, 410, 728
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 4 cut(s) 455, 510, 776, 875
HpyF3I CTNAG 2 cut(s) 336, 344
HpySE526I ACGT 1 cut(s) 86
Hsp92I GRCGYC 1 cut(s) 846
Hsp92II CATG 5 cut(s) 324, 387, 439, 496, 548
Ksp22I TGATCA 1 cut(s) 210
Kzo9I GATC 5 cut(s) 100, 210, 446, 615, 639
LmnI GCTCC 5 cut(s) 152, 160, 340, 747, 911
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 1 cut(s) 728
MalI GATC 5 cut(s) 102, 212, 448, 617, 641
MboI GATC 5 cut(s) 100, 210, 446, 615, 639
MboII GAAGA 3 cut(s) 95, 323, 512
MfeI CAATTG 2 cut(s) 185, 299
MflI RGATCY 3 cut(s) 100, 446, 639
MhlI GDGCHC 4 cut(s) 157, 362, 683, 877
MluCI AATT 6 cut(s) 65, 185, 299, 431, 667, 785
MmeI TCCRAC 1 cut(s) 454
MnlI CCTC 8 cut(s) 51, 54, 171, 518, 543, 596, 810, 876
MseI TTAA 5 cut(s) 71, 90, 288, 464, 572
MslI CAYNNNNRTG 1 cut(s) 603
MspA1I CMGCKG 1 cut(s) 714
MspCI CTTAAG 1 cut(s) 287
MspR9I CCNGG 1 cut(s) 150
MunI CAATTG 2 cut(s) 185, 299
MvaI CCWGG 1 cut(s) 150
NdeII GATC 5 cut(s) 100, 210, 446, 615, 639
NlaIII CATG 5 cut(s) 324, 387, 439, 496, 548
NlaIV GGNNCC 1 cut(s) 448
NspI RCATGY 2 cut(s) 324, 496
PagI TCATGA 1 cut(s) 544
PciI ACATGT 1 cut(s) 320
PfeI GAWTC 4 cut(s) 123, 314, 555, 708
PflFI GACNNNGTC 1 cut(s) 133
PscI ACATGT 1 cut(s) 320
Psp124BI GAGCTC 2 cut(s) 157, 362
Psp1406I AACGTT 1 cut(s) 86
Psp6I CCWGG 1 cut(s) 148
PspGI CCWGG 1 cut(s) 148
PspN4I GGNNCC 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 343
PsuI RGATCY 3 cut(s) 100, 446, 639
PsyI GACNNNGTC 1 cut(s) 133
RsaI GTAC 2 cut(s) 725, 833
RsaNI GTAC 2 cut(s) 724, 832
RseI CAYNNNNRTG 1 cut(s) 603
SacI GAGCTC 2 cut(s) 157, 362
SaqAI TTAA 5 cut(s) 71, 90, 288, 464, 572
Sau3AI GATC 5 cut(s) 100, 210, 446, 615, 639
ScrFI CCNGG 1 cut(s) 150
SduI GDGCHC 4 cut(s) 157, 362, 683, 877
SmiMI CAYNNNNRTG 1 cut(s) 603
SmlI CTYRAG 3 cut(s) 47, 287, 355
SmoI CTYRAG 3 cut(s) 47, 287, 355
Sse9I AATT 6 cut(s) 65, 185, 299, 431, 667, 785
SsiI CCGC 2 cut(s) 714, 863
SstI GAGCTC 2 cut(s) 157, 362
StyD4I CCNGG 1 cut(s) 148
TaaI ACNGT 4 cut(s) 133, 276, 410, 728
TaiI ACGT 1 cut(s) 89
TaqI TCGA 3 cut(s) 106, 523, 768
TasI AATT 6 cut(s) 65, 185, 299, 431, 667, 785
TatI WGTACW 1 cut(s) 723
TfiI GAWTC 4 cut(s) 123, 314, 555, 708
Tru1I TTAA 5 cut(s) 71, 90, 288, 464, 572
Tru9I TTAA 5 cut(s) 71, 90, 288, 464, 572
TspDTI ATGAA 5 cut(s) 17, 424, 530, 551, 901
Tth111I GACNNNGTC 1 cut(s) 133
Vha464I CTTAAG 1 cut(s) 287
VneI GTGCAC 1 cut(s) 873
XapI RAATTY 3 cut(s) 65, 431, 785
XceI RCATGY 2 cut(s) 324, 496
XmiI GTMKAC 1 cut(s) 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.