Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004995

Physical Location & Seq

Genomic Coordinates Forward (+)

13370951 .. 13372460

Gene Structure 1510 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G26470.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 696 bp

ATGGGAGGTGCAGTGACGAAATCTGAAACTCTGCAAAAAGAATGGGTTCCAGAGACAAAGTTGGAGGCTAAGATCATAGAAGCCGTGCAACGCAGGGCATCGAGGGGCACCACAATGAAATCTTTCAACAGTATTGTTCTCAAGTTCCCAAAGATCGATGATGGTCTTCGAAACTGCAAAGCCATTTTCCAAGAATTCGATGAGGATTCAAACGGGTCAATAGATCACACGGAGCTAAAGAATTGTATCAGGAAGCTAGAGATCTCGTTCGATGAAGAAGAGATTAATGATTTGTTCAAGGCTTGCGATATTAACGAGGATATGGGAATTACATTTACAGAATTCATTGTTCTTCTTTGCCTCGTCTATCTTCTTAAAGACGATTCATCCACTCTCCAAAAGAAATGGACAATGGGAATGCCAAAGCTGGAACCAACATTCGAGACGCTTGTTGACACATTTGTGTTCCTAGACGAGAACAAGGACGGATATGTTAGCCGCGAGGAGATGGTCCGAGCCATTGATGAATCAGGAGAACGATCCTCCGGGCGGATTGCAATGAAGAGATTTGAGGAAATGGACTGGGACAAGAACGGAATGGTGAACTTCAAAGAGTTTCTCTTCGCATTTACGCAGTGGGTTGGGATAGATGAGAATGAAGAAGAAGAAGAAGAAGACAACAATGAGAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0043167 GO:0043169 GO:0044424 GO:0044464 GO:0046872

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 EF-hand_8

Protein Analysis

231

Amino Acids

26.77

Weight (kDa)

4.5

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EF-hand_7	PF13499	59 - 116	1.7e-10	EF-hand domain pair
EF-hand_1	PF00036	59 - 86	5.7e-06	EF hand domain
EF-hand_8	PF13833	70 - 119	2.5e-06	EF-hand domain pair

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26470 AT4G26470 AT4G26470
fragaria_vesca	FvH4_3g41720 FvH4_3g41720 FvH4_3g41720 FvH4_3g41720
malus_domestica	MD03G1041500.v1.1 MD11G1042400.v1.1
prunus_persica	Prupe.6G033600_v2.0.a1 Prupe.6G033600_v2.0.a1
pyrus_communis	pycom03g03220 pycom11g03650
rosa_chinensis	RchiOBHm_Chr5g0074811
rosa_laevigata	RLG00000036507
rosa_multiflora	Rmu_co8378831.1_g000001 Rmu_sc0000909.1_g000003 Rmu_sc0005365.1_g000009
rosa_roxburghii	Rroxscaffold_1G00006760
rosa_rugosa	Rorug05G0434000 Rorug05G0434100 Rorug05G0434100 Rorug05G0434200 Rorug05G0434300 Rorug05G0434400
rosa_samantha	Rh5AG491900 Rh5BG513300 Rh5CG537000 Rh5DG525400
rosa_wichuraiana	Rw5G045570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	107
AccII	CGCG	1 cut(s)	501
AciI	CCGC	2 cut(s)	499, 550
AclWI	GGATC	1 cut(s)	534
AcsI	RAATTY	2 cut(s)	194, 341
AfiI	CCNNNNNNNGG	1 cut(s)	549
AgsI	TTSAA	4 cut(s)	127, 210, 298, 610
AleI	CACNNNNGTG	1 cut(s)	461
AluBI	AGCT	4 cut(s)	235, 256, 427, 692
AluI	AGCT	4 cut(s)	235, 256, 427, 692
Alw26I	GTCTC	2 cut(s)	47, 437
AlwI	GGATC	1 cut(s)	534
ApoI	RAATTY	2 cut(s)	194, 341
AseI	ATTAAT	1 cut(s)	285
Asp700I	GAANNNNTTC	2 cut(s)	45, 122
AspS9I	GGNCC	1 cut(s)	511
AsuC2I	CCSGG	1 cut(s)	547
AsuHPI	GGTGA	1 cut(s)	613
AsuII	TTCGAA	1 cut(s)	169
AvaII	GGWCC	1 cut(s)	511
BaeGI	GKGCMC	1 cut(s)	110
BanI	GGYRCC	1 cut(s)	107
BbsI	GAAGAC	2 cut(s)	158, 681
BccI	CCATC	2 cut(s)	155, 502
BceAI	ACGGC	1 cut(s)	68
BcnI	CCSGG	1 cut(s)	547
BcoDI	GTCTC	2 cut(s)	47, 437
BfaI	CTAG	2 cut(s)	257, 470
BglII	AGATCT	1 cut(s)	261
BisI	GCNGC	1 cut(s)	499
BlsI	GCNGC	1 cut(s)	500
Bme1390I	CCNGG	1 cut(s)	547
Bme18I	GGWCC	1 cut(s)	511
BmgT120I	GGNCC	1 cut(s)	511
BmiI	GGNNCC	3 cut(s)	48, 109, 432
BmrFI	CCNGG	1 cut(s)	547
BmrI	ACTGGG	1 cut(s)	592
BmsI	GCATC	1 cut(s)	107
BmuI	ACTGGG	1 cut(s)	592
BpiI	GAAGAC	2 cut(s)	158, 681
Bpu14I	TTCGAA	1 cut(s)	169
BpuEI	CTTGAG	1 cut(s)	125
BpuMI	CCSGG	1 cut(s)	547
Bsa29I	ATCGAT	1 cut(s)	156
BsaXI	ACNNNNNCTCC	1 cut(s)	27
Bsc4I	CCNNNNNNNGG	1 cut(s)	549
Bse1I	ACTGG	1 cut(s)	587
Bse3DI	GCAATG	1 cut(s)	564
BseCI	ATCGAT	1 cut(s)	156
BseGI	GGATG	1 cut(s)	386
BseLI	CCNNNNNNNGG	1 cut(s)	549
BseMI	GCAATG	1 cut(s)	564
BseNI	ACTGG	1 cut(s)	587
BseRI	GAGGAG	1 cut(s)	518
BseSI	GKGCMC	1 cut(s)	110
BsgI	GTGCAG	1 cut(s)	30
Bsh1236I	CGCG	1 cut(s)	501
BshNI	GGYRCC	1 cut(s)	107
BshVI	ATCGAT	1 cut(s)	156
BsiSI	CCGG	1 cut(s)	546
BslFI	GGGAC	1 cut(s)	599
BslI	CCNNNNNNNGG	1 cut(s)	549
BsmAI	GTCTC	2 cut(s)	47, 437
BsmBI	CGTCTC	1 cut(s)	437
BsmFI	GGGAC	1 cut(s)	599
BsmI	GAATGC	1 cut(s)	423
Bsp119I	TTCGAA	1 cut(s)	169
Bsp1286I	GDGCHC	1 cut(s)	110
Bsp143I	GATC	5 cut(s)	72, 153, 223, 261, 539
BspACI	CCGC	2 cut(s)	499, 550
BspDI	ATCGAT	1 cut(s)	156
BspFNI	CGCG	1 cut(s)	501
BspLI	GGNNCC	3 cut(s)	48, 109, 432
BspPI	GGATC	1 cut(s)	534
BspT104I	TTCGAA	1 cut(s)	169
BspT107I	GGYRCC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	564
BsrI	ACTGG	1 cut(s)	587
BssMI	GATC	5 cut(s)	72, 153, 223, 261, 539
Bst4CI	ACNGT	1 cut(s)	131
Bst6I	CTCTTC	3 cut(s)	273, 557, 626
BstBI	TTCGAA	1 cut(s)	169
BstC8I	GCNNGC	1 cut(s)	304
BstDEI	CTNAG	1 cut(s)	69
BstF5I	GGATG	1 cut(s)	386
BstFNI	CGCG	1 cut(s)	501
BstKTI	GATC	5 cut(s)	75, 156, 226, 264, 542
BstMAI	GTCTC	2 cut(s)	47, 437
BstMBI	GATC	5 cut(s)	72, 153, 223, 261, 539
BstSCI	CCNGG	1 cut(s)	545
BstSLI	GKGCMC	1 cut(s)	110
BstUI	CGCG	1 cut(s)	501
BstV2I	GAAGAC	2 cut(s)	158, 681
BstX2I	RGATCY	1 cut(s)	261
BstYI	RGATCY	1 cut(s)	261
Bsu15I	ATCGAT	1 cut(s)	156
BsuTUI	ATCGAT	1 cut(s)	156
BtsCI	GGATG	1 cut(s)	386
BtsI	GCAGTG	2 cut(s)	18, 641
BtsIMutI	CAGTG	2 cut(s)	18, 641
Cac8I	GCNNGC	1 cut(s)	304
Cfr13I	GGNCC	1 cut(s)	511
ClaI	ATCGAT	1 cut(s)	156
CseI	GACGC	1 cut(s)	454
DdeI	CTNAG	1 cut(s)	69
DpnI	GATC	5 cut(s)	74, 155, 225, 263, 541
DpnII	GATC	5 cut(s)	72, 153, 223, 261, 539
Eam1104I	CTCTTC	3 cut(s)	273, 557, 626
EarI	CTCTTC	3 cut(s)	273, 557, 626
EciI	GGCGGA	1 cut(s)	565
Eco47I	GGWCC	1 cut(s)	511
EcoRI	GAATTC	2 cut(s)	194, 341
Esp3I	CGTCTC	1 cut(s)	437
FaiI	YATR	3 cut(s)	77, 323, 492
FaqI	GGGAC	1 cut(s)	599
Fnu4HI	GCNGC	1 cut(s)	499
FokI	GGATG	1 cut(s)	373
Fsp4HI	GCNGC	1 cut(s)	499
FspBI	CTAG	2 cut(s)	257, 470
GluI	GCNGC	1 cut(s)	499
HapII	CCGG	1 cut(s)	546
HgaI	GACGC	1 cut(s)	454
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	1 cut(s)	690
HinfI	GANTC	3 cut(s)	206, 383, 527
HpaII	CCGG	1 cut(s)	546
HphI	GGTGA	1 cut(s)	613
Hpy166II	GTNNAC	2 cut(s)	454, 604
Hpy188I	TCNGA	2 cut(s)	25, 515
Hpy188III	TCNNGA	4 cut(s)	50, 250, 442, 531
Hpy8I	GTNNAC	2 cut(s)	454, 604
HpyCH4III	ACNGT	1 cut(s)	131
HpyCH4V	TGCA	5 cut(s)	11, 34, 88, 177, 557
HpyF3I	CTNAG	1 cut(s)	69
Kzo9I	GATC	5 cut(s)	72, 153, 223, 261, 539
LmnI	GCTCC	1 cut(s)	232
LpnPI	CCDG	7 cut(s)	63, 79, 235, 413, 516, 559, 568
LweI	GCATC	1 cut(s)	107
MaeI	CTAG	2 cut(s)	257, 470
MaeIII	GTNAC	1 cut(s)	13
MalI	GATC	5 cut(s)	74, 155, 225, 263, 541
MboI	GATC	5 cut(s)	72, 153, 223, 261, 539
MflI	RGATCY	1 cut(s)	261
MhlI	GDGCHC	1 cut(s)	110
MluCI	AATT	4 cut(s)	194, 241, 327, 341
MmeI	TCCRAC	1 cut(s)	42
MnlI	CCTC	8 cut(s)	58, 96, 196, 310, 371, 496, 553, 565
MroXI	GAANNNNTTC	2 cut(s)	45, 122
MseI	TTAA	4 cut(s)	285, 312, 375, 694
MslI	CAYNNNNRTG	2 cut(s)	113, 461
MspI	CCGG	1 cut(s)	546
MspR9I	CCNGG	1 cut(s)	547
Mva1269I	GAATGC	1 cut(s)	423
MvnI	CGCG	1 cut(s)	501
NciI	CCSGG	1 cut(s)	547
NdeII	GATC	5 cut(s)	72, 153, 223, 261, 539
NlaIV	GGNNCC	3 cut(s)	48, 109, 432
NmuCI	GTSAC	1 cut(s)	13
NspV	TTCGAA	1 cut(s)	169
OliI	CACNNNNGTG	1 cut(s)	461
PctI	GAATGC	1 cut(s)	423
PdmI	GAANNNNTTC	2 cut(s)	45, 122
PfeI	GAWTC	3 cut(s)	206, 383, 527
PkrI	GCNGC	1 cut(s)	500
PshBI	ATTAAT	1 cut(s)	285
PspN4I	GGNNCC	3 cut(s)	48, 109, 432
PspPI	GGNCC	1 cut(s)	511
PsuI	RGATCY	1 cut(s)	261
RseI	CAYNNNNRTG	2 cut(s)	113, 461
SaqAI	TTAA	4 cut(s)	285, 312, 375, 694
SatI	GCNGC	1 cut(s)	499
Sau3AI	GATC	5 cut(s)	72, 153, 223, 261, 539
Sau96I	GGNCC	1 cut(s)	511
ScrFI	CCNGG	1 cut(s)	547
SduI	GDGCHC	1 cut(s)	110
SetI	ASST	5 cut(s)	10, 237, 258, 429, 694
SfaNI	GCATC	1 cut(s)	107
SfuI	TTCGAA	1 cut(s)	169
SinI	GGWCC	1 cut(s)	511
SmiMI	CAYNNNNRTG	2 cut(s)	113, 461
SmlI	CTYRAG	1 cut(s)	140
SmoI	CTYRAG	1 cut(s)	140
Sse9I	AATT	4 cut(s)	194, 241, 327, 341
SsiI	CCGC	2 cut(s)	499, 550
SspMI	CTAG	2 cut(s)	257, 470
StyD4I	CCNGG	1 cut(s)	545
TaaI	ACNGT	1 cut(s)	131
TaqI	TCGA	6 cut(s)	101, 156, 169, 198, 270, 441
TasI	AATT	4 cut(s)	194, 241, 327, 341
TauI	GCSGC	1 cut(s)	501
TfiI	GAWTC	3 cut(s)	206, 383, 527
Tru1I	TTAA	4 cut(s)	285, 312, 375, 694
Tru9I	TTAA	4 cut(s)	285, 312, 375, 694
TscAI	CASTG	2 cut(s)	18, 641
TseFI	GTSAC	1 cut(s)	13
Tsp45I	GTSAC	1 cut(s)	13
TspDTI	ATGAA	7 cut(s)	131, 288, 334, 375, 540, 575, 672
TspGWI	ACGGA	3 cut(s)	245, 501, 609
TspRI	CASTG	2 cut(s)	18, 641
VpaK11BI	GGWCC	1 cut(s)	511
VspI	ATTAAT	1 cut(s)	285
XapI	RAATTY	2 cut(s)	194, 341
XmnI	GAANNNNTTC	2 cut(s)	45, 122
XspI	CTAG	2 cut(s)	257, 470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.