AT4G26540
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0008954
Physical Location & Seq
Reverse (-)
13394447 .. 13398307
3861 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26540.1

Sequence Viewer

Length: 3276 bp
ATGCCACCAAATATCTATAGACTCTCCTTCTTCTCATCCCTACTCTGTTTCTTCTTCATCCCCTGTTTCTCTCTCGACCAACAAGGTCAAGCTCTCTTGTCATGGAAGTCTCAACTGAACATCTCCGGCGACGCTTTTTCCTCCTGGCACGTCGCCGACACATCTCCCTGCAATTGGGTCGGCGTAAAATGTAACCGTAGAGGTGAAGTTTCGGAGATACAGCTCAAAGGTATGGACTTGCAAGGTTCTCTGCCGGTGACTAGTCTCCGGAGCCTCAAGTCTCTTACTTCCCTCACTTTATCTTCACTGAATCTCACCGGAGTAATCCCCAAGGAGATCGGAGACTTCACGGAGCTTGAGTTACTCGATTTGTCGGATAATTCTCTCTCCGGTGATATCCCTGTGGAAATCTTCAGGCTCAAGAAACTCAAGACTCTGTCTCTGAACACTAACAATCTAGAAGGTCATATTCCGATGGAGATTGGGAATCTTTCGGGTCTCGTAGAGCTTATGCTTTTCGACAACAAGCTATCCGGAGAGATCCCAAGGAGTATCGGAGAGCTCAAGAATCTACAAGTCTTACGTGCTGGTGGGAACAAGAATCTAAGAGGTGAGCTTCCTTGGGAGATAGGTAACTGCGAGAATCTTGTAATGCTTGGTCTCGCTGAGACTAGTCTCTCCGGGAAACTTCCGGCGTCGATTGGAAACCTGAAACGTGTTCAGACAATAGCAATTTACACGTCACTCTTGTCTGGTCCAATTCCGGATGAGATTGGATACTGCACAGAGCTCCAAAACCTCTACTTGTATCAGAATTCAATCTCAGGATCGATCCCTACCACCATTGGAGGTTTAAAGAAGCTGCAGAGTCTACTTTTATGGCAGAACAATCTCGTTGGGAAAATCCCAACCGAGCTTGGGAACTGTCCCGAGCTCTGGCTTATCGATTTTTCCGAGAATCTCCTCACCGGGACCATCCCAAGGAGCTTCGGAAAACTTGAGAATCTACAAGAGCTTCAGCTGAGTGTAAACCAGATCTCAGGAACAATCCCTGAAGAGCTAACGAATTGCACGAAGCTGACGCATTTAGAGATCGACAATAATCTCATCACAGGAGAGATTCCGTCATTGATGAGTAACCTAAGAAGCTTAACCATGTTCTTCGCATGGCAGAACAAGTTAACTGGAAACATCCCTCAAAGTCTCTCCCAGTGTCGTGAGCTTCAAGCCATCGATCTCTCTTACAACAGTCTCTCTGGCTCCATCCCAAAAGAGATATTCGGGTTACGAAACCTCACGAAGCTTCTTCTTCTCTCCAATGATTTGTCGGGTTTCATACCTCCGGATATTGGAAACTGTACGAATCTTTACCGGTTAAGACTCAACGGTAACAGACTCGCCGGAAGTATCCCGTCGGAAATCGGGAATCTGAAAAATCTCAACTTTGTTGATATAAGTGAGAACCGTCTCGTCGGGTCAATCCCTCCGGCGATCTCTGGTTGTGAAAGCCTCGAGTTTCTCGATCTTCACACGAATAGTCTCTCCGGTTCATTGCTCGGTACTACACTCCCAAAGAGCTTGAAGTTCATCGATTTCTCCGATAATGCTCTGTCCAGTACTCTGCCTCCGGGAATAGGATTGTTGACAGAGCTTACAAAGCTCAATCTCGCCAAGAACAGATTATCCGGCGAAATCCCTAGAGAAATCTCCACTTGTCGGAGTCTACAGCTTCTCAATCTCGGCGAAAATGACTTTTCTGGTGAAATCCCTGACGAATTGGGTCAAATCCCGTCTCTGGCGATATCTCTTAATCTCAGCTGCAATAGGTTCGTCGGAGAAATCCCGTCTAGATTCTCCGACTTGAAAAACCTTGGAGTGCTCGACGTATCTCACAACCAACTCACCGGAAACTTAAACGTTTTAACGGATTTGCAAAACCTCGTCTCTCTCAACATCTCCTACAACGATTTCTCCGGCGATTTACCCAACACGCCCTTTTTCCGGCGACTTCCACTTTCTGATCTCGCCTCAAACAGAGGGCTTTACATCTCGAACGCAATCTCGACCCGACCCGACCCGACGACCAGGAACAGCTCCGTCGTTAGATTGACTATTTTAATTCTCGTCGTCGTCACTGCCGTACTTGTTCTCATGGCGGTTTACACTCTAGTCCGGGCAAGAGCCGCCGGAAAACAACTCCTCGGAGAAGAAATAGATTCGTGGGAAGTGACGCTTTACCAAAAACTCGATTTTTCAATCGACGACATTGTTAAGAATCTGACGTCAGCAAACGTGATCGGAACCGGAAGCTCCGGTGTGGTTTACCGTATAACGATTCCCTCCGGCGAGTCACTCGCGGTGAAGAAAATGTGGTCAAAGGAAGAGAGTGGTGCGTTTAACTCCGAGATTAAAACTCTAGGATCGATTCGTCACAGAAACATCGTTCGTCTTCTTGGTTGGTGCTCTAATCGGAATCTGAAACTCTTGTTCTACGACTATCTCCCTAACGGTAGCTTGAGTTCTCGGCTTCACGGCGCCGGAAAAGGAGGATGTGTTGATTGGGAGGCGCGATACGACGTCGTTCTTGGTGTGGCCCATGCACTTGCTTATCTCCACCATGATTGTCTCCCCACAATTATACATGGTGACGTTAAAGCTATGAATGTCTTATTGGGTCCTCACTTTGAACCCTACTTAGCTGATTTCGGTTTAGCTAGAACCATCTCCGGTTATCCAAATACCGGAATCGATTTAGCGAAACCCACCAATCGGCCTCCGATGGCTGGCTCCTATGGTTACATGGCTCCAGAACATGCTTCGATGCAACGTATTACCGAGAAGAGCGATGTTTATAGTTACGGGGTGGTATTGTTAGAGGTTTTAACCGGAAAGCATCCGTTAGATCCGGATCTACCAGGAGGTGCACATTTGGTTAAGTGGGTGAGAGATCACTTGGCTGAGAAAAAAGATCCTAGCAGGCTTCTTGATCCGAGACTCGATGGACGGACTGACTCGATAATGCATGAGATGCTTCAAACTCTTGCGGTTGCGTTCTTGTGTGTTAGCAACAAGGCAAACGAACGACCTTTAATGAAAGATGTTGTGGCAATGCTCACAGAAATAAGGCATATTGATGTTGGAAGATCGGAGACAGAGAAGATCAAAGCTGGTGGTTGCGGAAGCAAAGAGCCACAACAATTTATGTCGAATGAGAAAATCATCAATTCTCACGGTTCGTCTAATTGTTCATTTGCGTTTTCGGATGACTCCGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1091

Amino Acids

119.53

Weight (kDa)

5.84

Isoelectric Point (pI)

34.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 65 2.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 74 - 195 3.1e-11 Leucine-rich repeat region
LRR_8 PF13855 94 - 153 1e-05 Leucine rich repeat
LRR_14 PF23598 204 - 289 2.3e-06 Leucine-rich repeat region
LRR_14 PF23598 276 - 410 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 315 - 370 4.8e-07 Leucine rich repeat
LRR_8 PF13855 454 - 514 2.2e-06 Leucine rich repeat
LRR_14 PF23598 498 - 710 2.9e-06 Leucine-rich repeat region
LRR_8 PF13855 602 - 657 4.9e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 762 - 1037 3.7e-33 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 763 - 968 3.3e-35 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 2285, 2580
AccB1I GGYRCC 1 cut(s) 2534
AccI GTMKAC 2 cut(s) 871, 1723
AccII CGCG 2 cut(s) 2357, 2569
AccIII TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
AciI CCGC 5 cut(s) 2156, 2184, 2357, 3044, 3177
AclI AACGTT 1 cut(s) 1917
AclWI GGATC 8 cut(s) 535, 826, 835, 2428, 2897, 2916, 2963, 2981
AcsI RAATTY 1 cut(s) 814
AcuI CTGAAG 3 cut(s) 397, 1001, 1074
AcyI GRCGYC 4 cut(s) 695, 2282, 2535, 2577
AfaI GTAC 4 cut(s) 1360, 1561, 1618, 2142
AflIII ACRYGT 2 cut(s) 715, 738
AgeI ACCGGT 1 cut(s) 1371
AgsI TTSAA 7 cut(s) 819, 1226, 1582, 1864, 2256, 2687, 3035
AhlI ACTAGT 2 cut(s) 260, 671
AjiI CACGTC 2 cut(s) 151, 741
AjnI CCWGG 3 cut(s) 143, 2084, 2914
AjuI GAANNNNNNNTTGG 2 cut(s) 2654, 2686
AloI GAACNNNNNNTCC 2 cut(s) 1667, 1699
Alw21I GWGCWC 6 cut(s) 564, 792, 936, 1881, 2465, 2926
Alw44I GTGCAC 1 cut(s) 2922
AlwI GGATC 8 cut(s) 535, 826, 835, 2428, 2897, 2916, 2963, 2981
Ama87I CYCGRG 2 cut(s) 929, 1511
Aor13HI TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
AoxI GGCC 2 cut(s) 2592, 2771
ApaLI GTGCAC 1 cut(s) 2922
ApeKI GCWGC 2 cut(s) 862, 1818
ApoI RAATTY 1 cut(s) 814
AsiGI ACCGGT 1 cut(s) 1371
AspLEI GCGC 2 cut(s) 2537, 2569
AspS9I GGNCC 4 cut(s) 755, 972, 2593, 2675
AsuC2I CCSGG 4 cut(s) 682, 970, 1629, 2174
AvaI CYCGRG 2 cut(s) 929, 1511
AvaII GGWCC 3 cut(s) 755, 972, 2675
BaeGI GKGCMC 1 cut(s) 2926
BanI GGYRCC 1 cut(s) 2534
BanII GRGCYC 3 cut(s) 564, 792, 936
BbsI GAAGAC 1 cut(s) 2441
Bbv12I GWGCWC 6 cut(s) 564, 792, 936, 1881, 2465, 2926
BbvI GCAGC 2 cut(s) 849, 1805
BccI CCATC 7 cut(s) 469, 983, 1238, 1271, 2729, 2773, 2993
BceAI ACGGC 2 cut(s) 2123, 2548
BcgI CGANNNNNNTGC 4 cut(s) 160, 194, 1810, 1844
BciT130I CCWGG 3 cut(s) 145, 2086, 2916
BciVI GTATCC 2 cut(s) 770, 1418
BcnI CCSGG 4 cut(s) 682, 970, 1629, 2174
BcuI ACTAGT 2 cut(s) 260, 671
BfaI CTAG 9 cut(s) 261, 458, 672, 1698, 1848, 2168, 2417, 2715, 2973
BfmI CTRYAG 3 cut(s) 16, 863, 1724
BfoI RGCGCY 1 cut(s) 2538
BfuI GTATCC 2 cut(s) 770, 1418
BglII AGATCT 1 cut(s) 1035
BisI GCNGC 3 cut(s) 863, 1819, 2184
BlsI GCNGC 3 cut(s) 864, 1820, 2185
BmcAI AGTACT 1 cut(s) 1618
Bme1390I CCNGG 7 cut(s) 145, 682, 970, 1629, 2086, 2174, 2916
Bme18I GGWCC 3 cut(s) 755, 972, 2675
BmeT110I CYCGRG 2 cut(s) 929, 1511
BmgBI CACGTC 2 cut(s) 151, 741
BmgT120I GGNCC 4 cut(s) 755, 972, 2593, 2675
BmiI GGNNCC 8 cut(s) 272, 973, 1261, 2302, 2536, 2676, 2788, 2805
BmrFI CCNGG 7 cut(s) 145, 682, 970, 1629, 2086, 2174, 2916
BmrI ACTGGG 1 cut(s) 1204
BmsI GCATC 3 cut(s) 2811, 2902, 3018
BmuI ACTGGG 1 cut(s) 1204
BpiI GAAGAC 1 cut(s) 2441
BpmI CTGGAG 1 cut(s) 2790
BpuEI CTTGAG 7 cut(s) 260, 377, 404, 413, 548, 1019, 2536
BpuMI CCSGG 4 cut(s) 682, 970, 1629, 2174
Bsa29I ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
BsaAI YACGTR 1 cut(s) 584
BsaBI GATNNNNATC 1 cut(s) 2907
BsaHI GRCGYC 4 cut(s) 695, 2282, 2535, 2577
BsaI GGTCTC 2 cut(s) 503, 665
BsaJI CCNNGG 6 cut(s) 330, 545, 620, 980, 1870, 2200
BsaXI ACNNNNNCTCC 8 cut(s) 344, 374, 1609, 1639, 1955, 1985, 2538, 2568
Bse118I RCCGGY 2 cut(s) 253, 1371
Bse1I ACTGG 3 cut(s) 1189, 1210, 1614
Bse3DI GCAATG 2 cut(s) 1550, 3114
Bse8I GATNNNNATC 1 cut(s) 2907
BseAI TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
BseBI CCWGG 3 cut(s) 145, 2086, 2916
BseCI ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
BseDI CCNNGG 6 cut(s) 330, 545, 620, 980, 1870, 2200
BseGI GGATG 9 cut(s) 35, 57, 772, 975, 1191, 1263, 2555, 2893, 3268
BseJI GATNNNNATC 1 cut(s) 2907
BseMI GCAATG 2 cut(s) 1550, 3114
BseMII CTCAG 6 cut(s) 657, 837, 1013, 1053, 1828, 2949
BseNI ACTGG 3 cut(s) 1189, 1210, 1614
BseRI GAGGAG 2 cut(s) 953, 2189
BseSI GKGCMC 1 cut(s) 2926
BseXI GCAGC 2 cut(s) 849, 1805
BsgI GTGCAG 1 cut(s) 766
Bsh1236I CGCG 2 cut(s) 2357, 2569
BshFI GGCC 2 cut(s) 2594, 2773
BshNI GGYRCC 1 cut(s) 2534
BshTI ACCGGT 1 cut(s) 1371
BshVI ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
BsiHKAI GWGCWC 6 cut(s) 564, 792, 936, 1881, 2465, 2926
BsiHKCI CYCGRG 2 cut(s) 929, 1511
BslFI GGGAC 2 cut(s) 912, 985
BsmBI CGTCTC 3 cut(s) 1472, 1797, 1948
BsmFI GGGAC 2 cut(s) 912, 985
BsnI GGCC 2 cut(s) 2594, 2773
Bso31I GGTCTC 2 cut(s) 503, 665
BsoBI CYCGRG 2 cut(s) 929, 1511
Bsp1286I GDGCHC 6 cut(s) 564, 792, 936, 1881, 2465, 2926
Bsp13I TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
BspACI CCGC 5 cut(s) 2156, 2184, 2357, 3044, 3177
BspANI GGCC 2 cut(s) 2594, 2773
BspCNI CTCAG 6 cut(s) 658, 836, 1014, 1052, 1827, 2950
BspDI ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
BspEI TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
BspFNI CGCG 2 cut(s) 2357, 2569
BspLI GGNNCC 8 cut(s) 272, 973, 1261, 2302, 2536, 2676, 2788, 2805
BspMAI CTGCAG 1 cut(s) 867
BspPI GGATC 8 cut(s) 535, 826, 835, 2428, 2897, 2916, 2963, 2981
BspQI GCTCTTC 2 cut(s) 1050, 2834
BspT107I GGYRCC 1 cut(s) 2534
BspTNI GGTCTC 2 cut(s) 503, 665
BsrDI GCAATG 2 cut(s) 1550, 3114
BsrFI RCCGGY 2 cut(s) 253, 1371
BsrI ACTGG 3 cut(s) 1189, 1210, 1614
BssAI RCCGGY 2 cut(s) 253, 1371
BssECI CCNNGG 6 cut(s) 330, 545, 620, 980, 1870, 2200
BssNI GRCGYC 4 cut(s) 695, 2282, 2535, 2577
BssT1I CCWWGG 5 cut(s) 330, 545, 620, 980, 1870
Bst2UI CCWGG 3 cut(s) 145, 2086, 2916
Bst4CI ACNGT 9 cut(s) 197, 926, 1250, 1358, 1388, 1466, 2327, 2510, 3233
Bst6I CTCTTC 3 cut(s) 1050, 2376, 2834
BstACI GRCGYC 4 cut(s) 695, 2282, 2535, 2577
BstAPI GCANNNNNTGC 1 cut(s) 3028
BstBAI YACGTR 1 cut(s) 584
BstC8I GCNNGC 2 cut(s) 2785, 2978
BstDEI CTNAG 9 cut(s) 605, 666, 823, 1022, 1039, 1142, 1814, 2695, 2958
BstF5I GGATG 9 cut(s) 35, 57, 772, 975, 1191, 1263, 2555, 2893, 3268
BstFNI CGCG 2 cut(s) 2357, 2569
BstH2I RGCGCY 1 cut(s) 2538
BstHHI GCGC 2 cut(s) 2537, 2569
BstMWI GCNNNNNNNGC 3 cut(s) 1657, 2183, 3028
BstNI CCWGG 3 cut(s) 145, 2086, 2916
BstNSI RCATGY 1 cut(s) 2816
BstSCI CCNGG 7 cut(s) 143, 680, 968, 1627, 2084, 2172, 2914
BstSFI CTRYAG 3 cut(s) 16, 863, 1724
BstSLI GKGCMC 1 cut(s) 2926
BstUI CGCG 2 cut(s) 2357, 2569
BstV1I GCAGC 2 cut(s) 849, 1805
BstV2I GAAGAC 1 cut(s) 2441
BstX2I RGATCY 5 cut(s) 540, 1035, 2902, 2908, 2968
BstYI RGATCY 5 cut(s) 540, 1035, 2902, 2908, 2968
Bsu15I ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
BsuI GTATCC 2 cut(s) 770, 1418
BsuRI GGCC 2 cut(s) 2594, 2773
BsuTUI ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
BtgZI GCGATG 1 cut(s) 2859
BtrI CACGTC 2 cut(s) 151, 741
BtsCI GGATG 9 cut(s) 35, 57, 772, 975, 1191, 1263, 2555, 2893, 3268
BtsI GCAGTG 1 cut(s) 2133
BtsIMutI CAGTG 3 cut(s) 305, 1217, 2133
Cac8I GCNNGC 2 cut(s) 2785, 2978
CfoI GCGC 2 cut(s) 2537, 2569
Cfr10I RCCGGY 2 cut(s) 253, 1371
Cfr13I GGNCC 4 cut(s) 755, 972, 2593, 2675
ClaI ATCGAT 6 cut(s) 830, 945, 1233, 1590, 2423, 2748
CseI GACGC 4 cut(s) 140, 684, 1090, 2239
Csp6I GTAC 4 cut(s) 1359, 1560, 1617, 2141
CspAI ACCGGT 1 cut(s) 1371
CspCI CAANNNNNGTGG 4 cut(s) 2603, 2638, 3151, 3186
CviQI GTAC 4 cut(s) 1359, 1560, 1617, 2141
DdeI CTNAG 9 cut(s) 605, 666, 823, 1022, 1039, 1142, 1814, 2695, 2958
DinI GGCGCC 1 cut(s) 2536
DraI TTTAAA 1 cut(s) 855
Eam1104I CTCTTC 3 cut(s) 1050, 2376, 2834
EarI CTCTTC 3 cut(s) 1050, 2376, 2834
Ecl136II GAGCTC 3 cut(s) 562, 790, 934
Eco130I CCWWGG 5 cut(s) 330, 545, 620, 980, 1870
Eco24I GRGCYC 3 cut(s) 564, 792, 936
Eco31I GGTCTC 2 cut(s) 503, 665
Eco32I GATATC 2 cut(s) 397, 1803
Eco47I GGWCC 3 cut(s) 755, 972, 2675
Eco53kI GAGCTC 3 cut(s) 562, 790, 934
Eco57I CTGAAG 3 cut(s) 397, 1001, 1074
Eco88I CYCGRG 2 cut(s) 929, 1511
EcoICRI GAGCTC 3 cut(s) 562, 790, 934
EcoO109I RGGNCCY 1 cut(s) 2675
EcoRI GAATTC 1 cut(s) 814
EcoRII CCWGG 3 cut(s) 143, 2084, 2914
EcoRV GATATC 2 cut(s) 397, 1803
EcoT14I CCWWGG 5 cut(s) 330, 545, 620, 980, 1870
EcoT22I ATGCAT 1 cut(s) 3024
EcoT38I GRGCYC 3 cut(s) 564, 792, 936
EgeI GGCGCC 1 cut(s) 2536
EheI GGCGCC 1 cut(s) 2536
ErhI CCWWGG 5 cut(s) 330, 545, 620, 980, 1870
Esp3I CGTCTC 3 cut(s) 1472, 1797, 1948
FalI AAGNNNNNCTT 2 cut(s) 2217, 2249
FaqI GGGAC 2 cut(s) 912, 985
FblI GTMKAC 2 cut(s) 871, 1723
Fnu4HI GCNGC 3 cut(s) 863, 1819, 2184
FokI GGATG 8 cut(s) 22, 44, 779, 962, 1178, 1250, 2562, 2880
FriOI GRGCYC 3 cut(s) 564, 792, 936
Fsp4HI GCNGC 3 cut(s) 863, 1819, 2184
FspBI CTAG 9 cut(s) 261, 458, 672, 1698, 1848, 2168, 2417, 2715, 2973
GlaI GCGC 2 cut(s) 2536, 2568
GluI GCNGC 3 cut(s) 863, 1819, 2184
GsuI CTGGAG 1 cut(s) 2790
HaeII RGCGCY 1 cut(s) 2538
HaeIII GGCC 2 cut(s) 2594, 2773
HgaI GACGC 4 cut(s) 140, 684, 1090, 2239
HhaI GCGC 2 cut(s) 2537, 2569
Hin1I GRCGYC 4 cut(s) 695, 2282, 2535, 2577
Hin6I GCGC 2 cut(s) 2535, 2567
HinP1I GCGC 2 cut(s) 2535, 2567
HincII GTYRAC 2 cut(s) 1182, 1644
HindII GTYRAC 2 cut(s) 1182, 1644
HindIII AAGCTT 2 cut(s) 1147, 1301
HpaI GTTAAC 1 cut(s) 1182
Hpy166II GTNNAC 8 cut(s) 872, 1030, 1182, 1644, 1724, 2161, 2323, 2924
Hpy8I GTNNAC 8 cut(s) 872, 1030, 1182, 1644, 1724, 2161, 2323, 2924
HpyAV CCTTC 2 cut(s) 37, 455
HpyCH4III ACNGT 9 cut(s) 197, 926, 1250, 1358, 1388, 1466, 2327, 2510, 3233
HpyF10VI GCNNNNNNNGC 3 cut(s) 1657, 2183, 3028
HpyF3I CTNAG 9 cut(s) 605, 666, 823, 1022, 1039, 1142, 1814, 2695, 2958
Hsp92I GRCGYC 4 cut(s) 695, 2282, 2535, 2577
HspAI GCGC 2 cut(s) 2535, 2567
KasI GGCGCC 1 cut(s) 2534
Kpn2I TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
KspAI GTTAAC 1 cut(s) 1182
LguI GCTCTTC 2 cut(s) 1050, 2834
LmnI GCTCC 9 cut(s) 270, 352, 795, 984, 1265, 2099, 2315, 2792, 2809
Lsp1109I GCAGC 2 cut(s) 849, 1805
LweI GCATC 3 cut(s) 2811, 2902, 3018
MaeI CTAG 9 cut(s) 261, 458, 672, 1698, 1848, 2168, 2417, 2715, 2973
MfeI CAATTG 1 cut(s) 172
MflI RGATCY 5 cut(s) 540, 1035, 2902, 2908, 2968
MhlI GDGCHC 6 cut(s) 564, 792, 936, 1881, 2465, 2926
Mly113I GGCGCC 1 cut(s) 2535
MmeI TCCRAC 6 cut(s) 354, 1395, 1697, 1813, 1881, 3118
Mph1103I ATGCAT 1 cut(s) 3024
MroI TCCGGA 5 cut(s) 267, 533, 763, 1342, 2905
MslI CAYNNNNRTG 1 cut(s) 3132
MspA1I CMGCKG 2 cut(s) 1021, 1818
MspR9I CCNGG 7 cut(s) 145, 682, 970, 1629, 2086, 2174, 2916
MunI CAATTG 1 cut(s) 172
MvaI CCWGG 3 cut(s) 145, 2086, 2916
MvnI CGCG 2 cut(s) 2357, 2569
MwoI GCNNNNNNNGC 3 cut(s) 1657, 2183, 3028
NarI GGCGCC 1 cut(s) 2535
NciI CCSGG 4 cut(s) 682, 970, 1629, 2174
NlaIV GGNNCC 8 cut(s) 272, 973, 1261, 2302, 2536, 2676, 2788, 2805
NmeAIII GCCGAG 2 cut(s) 1719, 2503
NmuCI GTSAC 7 cut(s) 256, 741, 2131, 2227, 2349, 2429, 2645
NsiI ATGCAT 1 cut(s) 3024
NspI RCATGY 1 cut(s) 2816
PaeR7I CTCGAG 1 cut(s) 1511
PciSI GCTCTTC 2 cut(s) 1050, 2834
PcsI WCGNNNNNNNCGW 5 cut(s) 951, 1070, 1518, 1596, 2136
PflFI GACNNNGTC 1 cut(s) 436
PfoI TCCNGGA 2 cut(s) 680, 1627
PinAI ACCGGT 1 cut(s) 1371
PkrI GCNGC 3 cut(s) 864, 1820, 2185
PluTI GGCGCC 1 cut(s) 2538
Ppu21I YACGTR 1 cut(s) 584
PpuMI RGGWCCY 1 cut(s) 2675
Psp124BI GAGCTC 3 cut(s) 564, 792, 936
Psp1406I AACGTT 1 cut(s) 1917
Psp5II RGGWCCY 1 cut(s) 2675
Psp6I CCWGG 3 cut(s) 143, 2084, 2914
PspGI CCWGG 3 cut(s) 143, 2084, 2914
PspN4I GGNNCC 8 cut(s) 272, 973, 1261, 2302, 2536, 2676, 2788, 2805
PspPI GGNCC 4 cut(s) 755, 972, 2593, 2675
PspPPI RGGWCCY 1 cut(s) 2675
PspXI VCTCGAGB 1 cut(s) 1511
PsrI GAACNNNNNNTAC 2 cut(s) 2503, 2535
PstI CTGCAG 1 cut(s) 867
PsuI RGATCY 5 cut(s) 540, 1035, 2902, 2908, 2968
PsyI GACNNNGTC 1 cut(s) 436
PvuII CAGCTG 2 cut(s) 1021, 1818
RsaI GTAC 4 cut(s) 1360, 1561, 1618, 2142
RsaNI GTAC 4 cut(s) 1359, 1560, 1617, 2141
RseI CAYNNNNRTG 1 cut(s) 3132
SacI GAGCTC 3 cut(s) 564, 792, 936
SapI GCTCTTC 2 cut(s) 1050, 2834
SatI GCNGC 3 cut(s) 863, 1819, 2184
Sau96I GGNCC 4 cut(s) 755, 972, 2593, 2675
ScaI AGTACT 1 cut(s) 1618
ScrFI CCNGG 7 cut(s) 145, 682, 970, 1629, 2086, 2174, 2916
SduI GDGCHC 6 cut(s) 564, 792, 936, 1881, 2465, 2926
SfaNI GCATC 3 cut(s) 2811, 2902, 3018
SfcI CTRYAG 3 cut(s) 16, 863, 1724
SfoI GGCGCC 1 cut(s) 2536
Sfr274I CTCGAG 1 cut(s) 1511
SinI GGWCC 3 cut(s) 755, 972, 2675
SlaI CTCGAG 1 cut(s) 1511
SmiMI CAYNNNNRTG 1 cut(s) 3132
SmlI CTYRAG 8 cut(s) 275, 356, 419, 428, 563, 998, 1511, 2515
SmoI CTYRAG 8 cut(s) 275, 356, 419, 428, 563, 998, 1511, 2515
SpeI ACTAGT 2 cut(s) 260, 671
SsiI CCGC 5 cut(s) 2156, 2184, 2357, 3044, 3177
SspDI GGCGCC 1 cut(s) 2534
SspMI CTAG 9 cut(s) 261, 458, 672, 1698, 1848, 2168, 2417, 2715, 2973
SstI GAGCTC 3 cut(s) 564, 792, 936
StyD4I CCNGG 7 cut(s) 143, 680, 968, 1627, 2084, 2172, 2914
StyI CCWWGG 5 cut(s) 330, 545, 620, 980, 1870
TaaI ACNGT 9 cut(s) 197, 926, 1250, 1358, 1388, 1466, 2327, 2510, 3233
TatI WGTACW 1 cut(s) 1616
TauI GCSGC 1 cut(s) 2186
TscAI CASTG 3 cut(s) 312, 1217, 2140
TseFI GTSAC 7 cut(s) 256, 741, 2131, 2227, 2349, 2429, 2645
TseI GCWGC 2 cut(s) 862, 1818
Tsp45I GTSAC 7 cut(s) 256, 741, 2131, 2227, 2349, 2429, 2645
TspDTI ATGAA 7 cut(s) 46, 1324, 1539, 1576, 2675, 3107, 3237
TspGWI ACGGA 7 cut(s) 365, 1113, 1940, 2086, 2886, 3019, 3259
TspRI CASTG 3 cut(s) 312, 1217, 2140
Tth111I GACNNNGTC 1 cut(s) 436
VneI GTGCAC 1 cut(s) 2922
VpaK11BI GGWCC 3 cut(s) 755, 972, 2675
XapI RAATTY 1 cut(s) 814
XbaI TCTAGA 2 cut(s) 457, 1847
XceI RCATGY 1 cut(s) 2816
XhoI CTCGAG 1 cut(s) 1511
XmiI GTMKAC 2 cut(s) 871, 1723
XspI CTAG 9 cut(s) 261, 458, 672, 1698, 1848, 2168, 2417, 2715, 2973
ZraI GACGTC 2 cut(s) 2283, 2578
ZrmI AGTACT 1 cut(s) 1618
Zsp2I ATGCAT 1 cut(s) 3024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.