FvH4_3g42190
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0008954
Physical Location & Seq
Reverse (-)
35237754 .. 35241981
4228 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g42190.t1

Sequence Viewer

Length: 3291 bp
ATGCCTGCTACTCTAAGGAATCCATTCCCTTCTCCCAATAACATCTTCTCAATAGTTTTACTTCTTTCAATAAACTCTCTTTTGTTTTCTTCATGTCATTCCATTGATGAACAAGGCCAGGCTCTTCTAGCATGGAAGAACAGTTTAAACAGCTCTACAGATGCGTTGAAATCATGGGTTTCTTCAGACGCAAGTCCATGCAACTGGTTTGGGATCCGCTGCAGCAACTCGAATGGAGAAGTGACAGAGATAACATTGAAGGCAGTAGATTTGCAAGGCTCATTGCCTTCAAATTTGCAGCCTCTCAAGTCCTTAAGAAGCCTCATCCTTTCTTCAACGAATCTCACTGGGACAATCCCGAAAGAGCTTGGAGATTATCATGAGCTAAGTTTCATTGATCTCGGTGACAACTCTCTCTCTGGTGAAATCCCAGAAGAAATATGCAGGCTGAGCAAACTCGAAACCTTATCTCTCAACACGAATTTCCTCGAAGGCAAAATCCCCTCAGGCATTGGTAACCTCTCAAACCTTGTGTACCTGACACTCTACGACAATCAACTCAGCGGCGAAATCCCAAAGAGTATTGGAGCATTGAGCAAGCTACAAGTCTTCAGAGCAGGAGGAAACAAAAACCTCAATGGTGAGATTCCTTGGGAGATTGGCAACTGCACCAACTTGGTCATGTTAGGCCTTGCTGAGACCAGCATTACCGGAAGTCTTCCTTCATCGATTGGACTACTGAAAAGTATCCAAACAATCGCCATATATACGTCTCTCTTGTCCGGTCCAATCCCAGAAGAGATTGGAAACTGCAGGGACTTGCAGAACCTGTACTTGTACCAGAACTCAATCACCGGTCCAATCCCAAAGCAGATTGGTGAGCTCAGCAAGCTTCAGAGTCTGTTGCTGTGGCAGAACAGTTTGGTGGGTTCAATTCCAGTTGAGCTAGGAAGCTGCAGTGAGCTCACAGTCCTGGACTTATCTGAAAATCTTCTGACAGGCCAGATACCGAAAACTTTTGGTGAGCTTTCGAAACTTCAGGAGCTGCAGTTGAGTGTCAATCAGCTATCAGGTACCATACCTTCTGAAATCTCAAACTGCAAGGATCTGACACACTTGGAATTTGACAACAACGACATCTCGGGGGAGATTCCCACTCTTATTGGCAACCTCAAGAGCCTAACTCTGTTTTTCGCCTGGCAGAATAGGCTCACAGGCAACATTCCTGAGAGTCTCTCTGATTGCCAGGAGCTTCAAGCTCTTGATCTTTCTTACAACAACCTCTTTGGTCCAATACCGAAGAATATCTTCGGCTTGAGAAATCTCACCAAGCTTCTGCTACTTTCCAATGATTTATCCGGGTTTATACCACCGGATATAGGAAACTGCTCGAGCTTGTACAGATTAAGGTTGAATCAGAACCGGCTGGCGGGTGCTATTCCAGCTGAGATTGGCAATTTGAAGAGCTTGAACTTTGTTGACATAAGCAACAACCGCCTTGTTGGTGCTGTCCCTCCAGCAATATCAGGATGTCAAAACCTCGAGTTTCTTGATCTGCATTCAAATGGTCTCACCGGCTCTGTCCCTGATACTCTGCCTAAGAGTCTTCAGTTTGTTGACATCTCAGACAACAGGCTCAACGGTCAGCTTCCTCACAGCATTGGTTCATTAACCGAATTAACGAAACTCAACCTCGGGAAGAATCAACTTTCTGGAAGCATACCGGCTGAGATCCTATCTTGCATTAAGCTTCAACTGCTAGACCTTGGCAACAATGGCTTCTCAGGTGAAATCCCAAAGCAACTTGGTCAGATTCCATCACTTGAAATTTCTCTCAACTTAAGCTGTAACCTTTTTTCTGGTGAAATCCCATCCCAATTCTCTGGTCTAACCAAGCTAGGAGTTCTTGACCTCTCCCACAATAAGCTATCTGGGAACTTAAACACTCTCACAGACCTTCAAAACCTTGTCTCCCTCAATGTCTCTAACAATGACTTTTCTGGTGAATTGCCTAACACCCCATTCTTTCGGAAACTCCCTCTTAGTGACCTTGCGGCAAACAAAGGTCTCTACATCGCAGGCGGGGTTGTAACTCCAGCTGACAGAATGGGAGCAGGCCACAGCAGATCAGTTATGAAGCTAATCATGTCCATTCTCATTAGTGCTAGTGCATTACTTCTCCTGCTTGCAGTTTACACGCTAATCCGTGCTCGAATAGCCAACAACATTCTCAGGGAAGATGACAGCTGGGAAATGACCTTGTACCAGAAGCTGGAATTCTCTGTTGATGACATTGTCAAGAATTTAACTTCATCCAATGTGATTGGTACTGGAAGCTCTGGAGTTGTATACAGAGTGACAATTCCAAATGGGGAGACACTAGCAGTGAAGAAGATGTGGTCATCAGAAGAGTCAGGAGCATTCAGTTCCGAAATCCAGACACTTGGTTCAATCAGGCACAAGAACATCATCAGGCTCCTTGGTTGGTGTTCCAACCGAAACCTGAAGCTTTTGTTCTATGATTACCTTCCCAGTGGAAGCTTGAGCTCACAGTTACATGGTGCTGGTAAAGGAGGACAAGATTGGGAGTCTAGATATGATGTTGTCCTAGGTGTGGCACACGCTTTATCGTACTTGCATCATGATTGTGTGCCTGCTATTTTACATGGTGATGTGAAAGCCATGAACGTGTTGTTGGGTCCTGGAAATGAGCCTTGCCTTGCTGACTTTGGCTTAGCTAGGATTGTCAATAGCAATGGTGATGATGATGAGTTGTCCAAACCAAGTCAGAGGCCTCAGCTAGCTGGTTCTTATGGATACATGGCTCCAGAACACGCTTCGATGCAGAGGATTGATGAAAAGAGTGATGTGTACAGTTTTGGGGTTGTTCTGTTAGAGGTGTTAACAGGAAGGCATCCACTAGACCCAACTTTGCCTGGTGGTGCACATTTAGTTCAATGGGTTCGTGAGCACTTAGCCGCAAAGCGAGACCCATCAGACATTCTTGACTCAAAGCTTAGAGGAAGAGCTGATCCTACAATGCATGAAATGCTGCAAACACTAGCTGTGTCATTTCTTTGTGTCAGTACTCGTGCCAGTGATCGTCCCACGATGAAAGATATCGTGGCAATGCTCAAAGAAATTCGACATGTTGAGACCGCAAGGTCAGAGCCAGAAATGTCAAAGGGAGGAGCATTACAATCAATTCTAGCATCTCCTCCAGCAAGAAAAGCAGTTTCACAAGGCTCTTCAAACTGCTCCTTTGCTTTCTCTGAAGATTCAATGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

1097

Amino Acids

118.58

Weight (kDa)

5.39

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 75 1.8e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 97 - 206 2.6e-11 Leucine-rich repeat region
LRR_14 PF23598 219 - 327 9.7e-10 Leucine-rich repeat region
LRR_8 PF13855 321 - 380 1.8e-08 Leucine rich repeat
LRR_8 PF13855 465 - 524 1.9e-06 Leucine rich repeat
LRR_8 PF13855 611 - 666 4.1e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 771 - 1045 7.9e-35 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 772 - 1042 5.4e-36 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3163
Acc65I GGTACC 1 cut(s) 1073
AccB1I GGYRCC 1 cut(s) 1073
AccB7I CCANNNNNTGG 1 cut(s) 2272
AccI GTMKAC 1 cut(s) 2349
AciI CCGC 8 cut(s) 217, 564, 1430, 1495, 2054, 2082, 2979, 3159
AclWI GGATC 5 cut(s) 208, 221, 1113, 1726, 3026
AcsI RAATTY 7 cut(s) 292, 481, 1121, 1827, 2276, 2302, 3141
AcuI CTGAAG 6 cut(s) 168, 595, 878, 1022, 1592, 2525
AfiI CCNNNNNNNGG 4 cut(s) 1379, 1429, 2272, 2614
AflII CTTAAG 2 cut(s) 313, 1840
AflIII ACRYGT 2 cut(s) 2688, 3148
AgeI ACCGGT 1 cut(s) 854
AjnI CCWGG 6 cut(s) 117, 972, 1196, 1245, 2701, 2935
AjuI GAANNNNNNNTTGG 4 cut(s) 29, 61, 2678, 2710
Alw21I GWGCWC 6 cut(s) 885, 966, 2212, 2549, 2947, 2973
Alw44I GTGCAC 1 cut(s) 2943
AlwI GGATC 5 cut(s) 208, 221, 1113, 1726, 3026
AlwNI CAGNNNCTG 4 cut(s) 829, 901, 1045, 2272
Ama87I CYCGRG 4 cut(s) 1141, 1390, 1541, 1694
AoxI GGCC 5 cut(s) 115, 688, 1000, 2116, 2792
ApaLI GTGCAC 1 cut(s) 2943
ApeKI GCWGC 6 cut(s) 219, 222, 298, 954, 1045, 3052
ApoI RAATTY 7 cut(s) 292, 481, 1121, 1827, 2276, 2302, 3141
AsiGI ACCGGT 1 cut(s) 854
Asp700I GAANNNNTTC 3 cut(s) 23, 990, 1307
Asp718I GGTACC 1 cut(s) 1073
AspA2I CCTAGG 1 cut(s) 2608
AspS9I GGNCC 4 cut(s) 785, 857, 1289, 2699
AsuC2I CCSGG 1 cut(s) 1360
AsuII TTCGAA 1 cut(s) 1031
AsuNHI GCTAGC 1 cut(s) 2800
AvaI CYCGRG 4 cut(s) 1141, 1390, 1541, 1694
AvaII GGWCC 4 cut(s) 785, 857, 1289, 2699
AvrII CCTAGG 1 cut(s) 2608
AxyI CCTNAGG 1 cut(s) 505
BaeGI GKGCMC 1 cut(s) 2947
BamHI GGATCC 1 cut(s) 213
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 3 cut(s) 885, 966, 2549
BarI GAAGNNNNNNTAC 2 cut(s) 1066, 1098
BauI CACGAG 1 cut(s) 3090
BbsI GAAGAC 3 cut(s) 601, 710, 1598
Bbv12I GWGCWC 6 cut(s) 885, 966, 2212, 2549, 2947, 2973
BbvCI CCTCAGC 1 cut(s) 2796
BbvI GCAGC 6 cut(s) 206, 234, 310, 941, 1032, 3039
BccI CCATC 3 cut(s) 1825, 1879, 3001
BciT130I CCWGG 6 cut(s) 119, 974, 1198, 1247, 2703, 2937
BciVI GTATCC 2 cut(s) 758, 2810
BcnI CCSGG 1 cut(s) 1360
BfmI CTRYAG 5 cut(s) 156, 220, 811, 955, 1046
BfrI CTTAAG 2 cut(s) 313, 1840
BfuI GTATCC 2 cut(s) 758, 2810
BisI GCNGC 9 cut(s) 220, 223, 299, 565, 955, 1046, 2055, 2979, 3053
BlnI CCTAGG 1 cut(s) 2608
BlpI GCTNAGC 3 cut(s) 449, 884, 2734
BlsI GCNGC 9 cut(s) 221, 224, 300, 566, 956, 1047, 2056, 2980, 3054
BmcAI AGTACT 1 cut(s) 3088
Bme1390I CCNGG 7 cut(s) 119, 974, 1198, 1247, 1360, 2703, 2937
Bme18I GGWCC 4 cut(s) 785, 857, 1289, 2699
BmeT110I CYCGRG 4 cut(s) 1141, 1390, 1541, 1694
BmgT120I GGNCC 4 cut(s) 785, 857, 1289, 2699
BmiI GGNNCC 5 cut(s) 215, 1075, 2477, 2700, 2826
BmrFI CCNGG 7 cut(s) 119, 974, 1198, 1247, 1360, 2703, 2937
BmrI ACTGGG 2 cut(s) 357, 2526
BmsI GCATC 5 cut(s) 151, 2647, 2832, 2923, 3221
BmtI GCTAGC 1 cut(s) 2804
BmuI ACTGGG 2 cut(s) 357, 2526
BoxI GACNNNNGTC 1 cut(s) 192
BpiI GAAGAC 3 cut(s) 601, 710, 1598
BplI GAGNNNNNCTC 4 cut(s) 1168, 1200, 1220, 1252
BpmI CTGGAG 5 cut(s) 1500, 2079, 2361, 2811, 3204
Bpu10I CCTNAGC 1 cut(s) 2796
Bpu1102I GCTNAGC 3 cut(s) 449, 884, 2734
Bpu14I TTCGAA 1 cut(s) 1031
BpuEI CTTGAG 4 cut(s) 290, 1157, 1336, 2563
BpuMI CCSGG 1 cut(s) 1360
Bsa29I ATCGAT 1 cut(s) 728
BsaI GGTCTC 5 cut(s) 692, 1574, 2072, 2982, 3149
BsaJI CCNNGG 5 cut(s) 650, 1693, 1765, 2479, 2608
BsaWI WCCGGW 4 cut(s) 710, 782, 854, 1372
BsaXI ACNNNNNCTCC 4 cut(s) 1034, 1064, 1955, 1985
Bsc4I CCNNNNNNNGG 4 cut(s) 1379, 1429, 2272, 2614
Bse118I RCCGGY 4 cut(s) 854, 1422, 1574, 1723
Bse1I ACTGG 6 cut(s) 209, 352, 938, 2335, 2532, 3096
Bse21I CCTNAGG 1 cut(s) 505
Bse3DI GCAATG 3 cut(s) 281, 2761, 3135
BseBI CCWGG 6 cut(s) 119, 974, 1198, 1247, 2703, 2937
BseCI ATCGAT 1 cut(s) 728
BseDI CCNNGG 5 cut(s) 650, 1693, 1765, 2479, 2608
BseGI GGATG 5 cut(s) 324, 1535, 1871, 2312, 2914
BseLI CCNNNNNNNGG 4 cut(s) 1379, 1429, 2272, 2614
BseMI GCAATG 3 cut(s) 281, 2761, 3135
BseNI ACTGG 6 cut(s) 209, 352, 938, 2335, 2532, 3096
BseRI GAGGAG 2 cut(s) 3204, 3207
BseSI GKGCMC 1 cut(s) 2947
BseXI GCAGC 6 cut(s) 206, 234, 310, 941, 1032, 3039
BseYI CCCAGC 1 cut(s) 2247
BsgI GTGCAG 1 cut(s) 652
BshFI GGCC 5 cut(s) 117, 690, 1002, 2118, 2794
BshNI GGYRCC 1 cut(s) 1073
BshTI ACCGGT 1 cut(s) 854
BshVI ATCGAT 1 cut(s) 728
BsiHKAI GWGCWC 6 cut(s) 885, 966, 2212, 2549, 2947, 2973
BsiHKCI CYCGRG 4 cut(s) 1141, 1390, 1541, 1694
BsiSI CCGG 8 cut(s) 711, 783, 855, 1359, 1373, 1423, 1575, 1724
BslFI GGGAC 5 cut(s) 364, 830, 1496, 1568, 3090
BslI CCNNNNNNNGG 4 cut(s) 1379, 1429, 2272, 2614
BsmBI CGTCTC 1 cut(s) 777
BsmFI GGGAC 5 cut(s) 364, 830, 1496, 1568, 3090
BsmI GAATGC 2 cut(s) 1558, 2420
BsnI GGCC 5 cut(s) 117, 690, 1002, 2118, 2794
Bso31I GGTCTC 5 cut(s) 692, 1574, 2072, 2982, 3149
BsoBI CYCGRG 4 cut(s) 1141, 1390, 1541, 1694
Bsp119I TTCGAA 1 cut(s) 1031
Bsp1286I GDGCHC 6 cut(s) 885, 966, 2212, 2549, 2947, 2973
Bsp1407I TGTACA 2 cut(s) 1398, 2871
Bsp143I GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
Bsp1720I GCTNAGC 3 cut(s) 449, 884, 2734
BspACI CCGC 8 cut(s) 217, 564, 1430, 1495, 2054, 2082, 2979, 3159
BspANI GGCC 5 cut(s) 117, 690, 1002, 2118, 2794
BspDI ATCGAT 1 cut(s) 728
BspHI TCATGA 2 cut(s) 379, 2641
BspLI GGNNCC 5 cut(s) 215, 1075, 2477, 2700, 2826
BspMAI CTGCAG 4 cut(s) 224, 815, 959, 1050
BspOI GCTAGC 1 cut(s) 2804
BspPI GGATC 5 cut(s) 208, 221, 1113, 1726, 3026
BspQI GCTCTTC 4 cut(s) 129, 1457, 3019, 3253
BspT104I TTCGAA 1 cut(s) 1031
BspT107I GGYRCC 1 cut(s) 1073
BspTI CTTAAG 2 cut(s) 313, 1840
BspTNI GGTCTC 5 cut(s) 692, 1574, 2072, 2982, 3149
BsrDI GCAATG 3 cut(s) 281, 2761, 3135
BsrFI RCCGGY 4 cut(s) 854, 1422, 1574, 1723
BsrGI TGTACA 2 cut(s) 1398, 2871
BsrI ACTGG 6 cut(s) 209, 352, 938, 2335, 2532, 3096
BssAI RCCGGY 4 cut(s) 854, 1422, 1574, 1723
BssECI CCNNGG 5 cut(s) 650, 1693, 1765, 2479, 2608
BssMI GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
BssNAI GTATAC 1 cut(s) 2350
BssSI CACGAG 1 cut(s) 3090
BssT1I CCWWGG 4 cut(s) 650, 1765, 2479, 2608
Bst1107I GTATAC 1 cut(s) 2350
Bst2BI CACGAG 1 cut(s) 3090
Bst2UI CCWGG 6 cut(s) 119, 974, 1198, 1247, 2703, 2937
Bst4CI ACNGT 6 cut(s) 143, 920, 970, 1643, 2553, 2876
Bst6I CTCTTC 6 cut(s) 129, 792, 1457, 2403, 3019, 3253
BstAFI CTTAAG 2 cut(s) 313, 1840
BstAPI GCANNNNNTGC 1 cut(s) 3049
BstAUI TGTACA 2 cut(s) 1398, 2871
BstBI TTCGAA 1 cut(s) 1031
BstEII GGTNACC 1 cut(s) 515
BstF5I GGATG 5 cut(s) 324, 1535, 1871, 2312, 2914
BstKTI GATC 9 cut(s) 216, 400, 1108, 1267, 1555, 1734, 2129, 3034, 3103
BstMBI GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
BstNI CCWGG 6 cut(s) 119, 974, 1198, 1247, 2703, 2937
BstNSI RCATGY 1 cut(s) 3152
BstPAI GACNNNNGTC 1 cut(s) 192
BstPI GGTNACC 1 cut(s) 515
BstSCI CCNGG 7 cut(s) 117, 972, 1196, 1245, 1358, 2701, 2935
BstSFI CTRYAG 5 cut(s) 156, 220, 811, 955, 1046
BstSLI GKGCMC 1 cut(s) 2947
BstV1I GCAGC 6 cut(s) 206, 234, 310, 941, 1032, 3039
BstV2I GAAGAC 3 cut(s) 601, 710, 1598
BstX2I RGATCY 3 cut(s) 213, 1105, 1731
BstXI CCANNNNNNTGG 3 cut(s) 204, 1883, 2444
BstYI RGATCY 3 cut(s) 213, 1105, 1731
BstZ17I GTATAC 1 cut(s) 2350
Bsu15I ATCGAT 1 cut(s) 728
Bsu36I CCTNAGG 1 cut(s) 505
BsuI GTATCC 2 cut(s) 758, 2810
BsuRI GGCC 5 cut(s) 117, 690, 1002, 2118, 2794
BsuTUI ATCGAT 1 cut(s) 728
BtgZI GCGATG 1 cut(s) 2059
BtsCI GGATG 5 cut(s) 324, 1535, 1871, 2312, 2914
BtsI GCAGTG 2 cut(s) 964, 2391
BtsIMutI CAGTG 5 cut(s) 345, 964, 2391, 2539, 3103
CaiI CAGNNNCTG 4 cut(s) 829, 901, 1045, 2272
CciI TCATGA 2 cut(s) 379, 2641
Cfr10I RCCGGY 4 cut(s) 854, 1422, 1574, 1723
Cfr13I GGNCC 4 cut(s) 785, 857, 1289, 2699
ClaI ATCGAT 1 cut(s) 728
CseI GACGC 1 cut(s) 197
CspAI ACCGGT 1 cut(s) 854
CspCI CAANNNNNGTGG 2 cut(s) 1144, 1179
DpnI GATC 9 cut(s) 215, 399, 1107, 1266, 1554, 1733, 2128, 3033, 3102
DpnII GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
DraI TTTAAA 1 cut(s) 147
DrdI GACNNNNNNGTC 1 cut(s) 3163
DseDI GACNNNNNNGTC 1 cut(s) 3163
Eam1104I CTCTTC 6 cut(s) 129, 792, 1457, 2403, 3019, 3253
EarI CTCTTC 6 cut(s) 129, 792, 1457, 2403, 3019, 3253
Ecl136II GAGCTC 3 cut(s) 883, 964, 2547
Eco130I CCWWGG 4 cut(s) 650, 1765, 2479, 2608
Eco147I AGGCCT 2 cut(s) 690, 2794
Eco24I GRGCYC 3 cut(s) 885, 966, 2549
Eco31I GGTCTC 5 cut(s) 692, 1574, 2072, 2982, 3149
Eco32I GATATC 1 cut(s) 3121
Eco47I GGWCC 4 cut(s) 785, 857, 1289, 2699
Eco53kI GAGCTC 3 cut(s) 883, 964, 2547
Eco57I CTGAAG 6 cut(s) 168, 595, 878, 1022, 1592, 2525
Eco81I CCTNAGG 1 cut(s) 505
Eco88I CYCGRG 4 cut(s) 1141, 1390, 1541, 1694
Eco91I GGTNACC 1 cut(s) 515
EcoICRI GAGCTC 3 cut(s) 883, 964, 2547
EcoO109I RGGNCCY 1 cut(s) 2699
EcoO65I GGTNACC 1 cut(s) 515
EcoRI GAATTC 1 cut(s) 2276
EcoRII CCWGG 6 cut(s) 117, 972, 1196, 1245, 2701, 2935
EcoRV GATATC 1 cut(s) 3121
EcoT14I CCWWGG 4 cut(s) 650, 1765, 2479, 2608
EcoT22I ATGCAT 1 cut(s) 3045
EcoT38I GRGCYC 3 cut(s) 885, 966, 2549
ErhI CCWWGG 4 cut(s) 650, 1765, 2479, 2608
Esp3I CGTCTC 1 cut(s) 777
FalI AAGNNNNNCTT 4 cut(s) 706, 738, 1292, 1324
FaqI GGGAC 5 cut(s) 364, 830, 1496, 1568, 3090
FauI CCCGC 2 cut(s) 1423, 2075
FblI GTMKAC 1 cut(s) 2349
Fnu4HI GCNGC 9 cut(s) 220, 223, 299, 565, 955, 1046, 2055, 2979, 3053
FokI GGATG 5 cut(s) 311, 1542, 1858, 2299, 2901
FriOI GRGCYC 3 cut(s) 885, 966, 2549
Fsp4HI GCNGC 9 cut(s) 220, 223, 299, 565, 955, 1046, 2055, 2979, 3053
GluI GCNGC 9 cut(s) 220, 223, 299, 565, 955, 1046, 2055, 2979, 3053
GsaI CCCAGC 1 cut(s) 2251
GsuI CTGGAG 5 cut(s) 1500, 2079, 2361, 2811, 3204
HaeIII GGCC 5 cut(s) 117, 690, 1002, 2118, 2794
HapII CCGG 8 cut(s) 711, 783, 855, 1359, 1373, 1423, 1575, 1724
HgaI GACGC 1 cut(s) 197
HincII GTYRAC 3 cut(s) 1480, 1618, 2904
HindII GTYRAC 3 cut(s) 1480, 1618, 2904
HindIII AAGCTT 6 cut(s) 890, 1331, 1748, 2507, 2539, 3014
HpaI GTTAAC 1 cut(s) 2904
HpaII CCGG 8 cut(s) 711, 783, 855, 1359, 1373, 1423, 1575, 1724
Hpy166II GTNNAC 8 cut(s) 535, 1480, 1618, 2194, 2350, 2872, 2904, 2945
Hpy8I GTNNAC 8 cut(s) 535, 1480, 1618, 2194, 2350, 2872, 2904, 2945
HpyAV CCTTC 9 cut(s) 39, 253, 297, 485, 732, 1092, 1967, 2537, 2904
HpyCH4III ACNGT 6 cut(s) 143, 920, 970, 1643, 2553, 2876
HpyCH4IV ACGT 2 cut(s) 770, 2688
HpySE526I ACGT 2 cut(s) 770, 2688
KpnI GGTACC 1 cut(s) 1077
KspAI GTTAAC 1 cut(s) 2904
Kzo9I GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
LguI GCTCTTC 4 cut(s) 129, 1457, 3019, 3253
LmnI GCTCC 9 cut(s) 587, 1042, 1249, 2111, 2417, 2481, 2830, 3191, 3263
Lsp1109I GCAGC 6 cut(s) 206, 234, 310, 941, 1032, 3039
LweI GCATC 5 cut(s) 151, 2647, 2832, 2923, 3221
MaeII ACGT 2 cut(s) 770, 2688
MaeIII GTNAC 8 cut(s) 241, 404, 515, 1847, 2045, 2089, 2356, 2553
MalI GATC 9 cut(s) 215, 399, 1107, 1266, 1554, 1733, 2128, 3033, 3102
MboI GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
MflI RGATCY 3 cut(s) 213, 1105, 1731
MhlI GDGCHC 6 cut(s) 885, 966, 2212, 2549, 2947, 2973
MlyI GAGTC 6 cut(s) 907, 1240, 1612, 2420, 2597, 3002
MmeI TCCRAC 1 cut(s) 2517
Mph1103I ATGCAT 1 cut(s) 3045
MroXI GAANNNNTTC 3 cut(s) 23, 990, 1307
MslI CAYNNNNRTG 4 cut(s) 1563, 2646, 2670, 2687
MspA1I CMGCKG 5 cut(s) 219, 564, 1445, 2099, 2247
MspCI CTTAAG 2 cut(s) 313, 1840
MspI CCGG 8 cut(s) 711, 783, 855, 1359, 1373, 1423, 1575, 1724
MspR9I CCNGG 7 cut(s) 119, 974, 1198, 1247, 1360, 2703, 2937
MssI GTTTAAAC 1 cut(s) 147
Mva1269I GAATGC 2 cut(s) 1558, 2420
MvaI CCWGG 6 cut(s) 119, 974, 1198, 1247, 2703, 2937
NciI CCSGG 1 cut(s) 1360
NdeII GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
NheI GCTAGC 1 cut(s) 2800
NlaIV GGNNCC 5 cut(s) 215, 1075, 2477, 2700, 2826
NmuCI GTSAC 4 cut(s) 241, 404, 2045, 2356
NsiI ATGCAT 1 cut(s) 3045
NspI RCATGY 1 cut(s) 3152
NspV TTCGAA 1 cut(s) 1031
PaeR7I CTCGAG 2 cut(s) 1390, 1541
PagI TCATGA 2 cut(s) 379, 2641
PceI AGGCCT 2 cut(s) 690, 2794
PciI ACATGT 1 cut(s) 3148
PciSI GCTCTTC 4 cut(s) 129, 1457, 3019, 3253
PctI GAATGC 2 cut(s) 1558, 2420
PdmI GAANNNNTTC 3 cut(s) 23, 990, 1307
PfeI GAWTC 8 cut(s) 19, 340, 646, 1150, 1414, 1702, 1813, 3278
PflFI GACNNNGTC 1 cut(s) 2294
PflMI CCANNNNNTGG 1 cut(s) 2272
PfoI TCCNGGA 2 cut(s) 972, 2701
PinAI ACCGGT 1 cut(s) 854
PkrI GCNGC 9 cut(s) 221, 224, 300, 566, 956, 1047, 2056, 2980, 3054
PleI GAGTC 6 cut(s) 906, 1239, 1611, 2419, 2596, 3002
PmeI GTTTAAAC 1 cut(s) 147
PpsI GAGTC 6 cut(s) 906, 1239, 1611, 2419, 2596, 3002
PpuMI RGGWCCY 1 cut(s) 2699
PscI ACATGT 1 cut(s) 3148
PshAI GACNNNNGTC 1 cut(s) 192
Psp124BI GAGCTC 3 cut(s) 885, 966, 2549
Psp5II RGGWCCY 1 cut(s) 2699
Psp6I CCWGG 6 cut(s) 117, 972, 1196, 1245, 2701, 2935
PspEI GGTNACC 1 cut(s) 515
PspFI CCCAGC 1 cut(s) 2247
PspGI CCWGG 6 cut(s) 117, 972, 1196, 1245, 2701, 2935
PspN4I GGNNCC 5 cut(s) 215, 1075, 2477, 2700, 2826
PspPI GGNCC 4 cut(s) 785, 857, 1289, 2699
PspPPI RGGWCCY 1 cut(s) 2699
PspXI VCTCGAGB 2 cut(s) 1390, 1541
PstI CTGCAG 4 cut(s) 224, 815, 959, 1050
PstNI CAGNNNCTG 4 cut(s) 829, 901, 1045, 2272
PsuI RGATCY 3 cut(s) 213, 1105, 1731
PsyI GACNNNGTC 1 cut(s) 2294
PvuII CAGCTG 3 cut(s) 1445, 2099, 2247
RseI CAYNNNNRTG 4 cut(s) 1563, 2646, 2670, 2687
SacI GAGCTC 3 cut(s) 885, 966, 2549
SapI GCTCTTC 4 cut(s) 129, 1457, 3019, 3253
SatI GCNGC 9 cut(s) 220, 223, 299, 565, 955, 1046, 2055, 2979, 3053
Sau3AI GATC 9 cut(s) 213, 397, 1105, 1264, 1552, 1731, 2126, 3031, 3100
Sau96I GGNCC 4 cut(s) 785, 857, 1289, 2699
ScaI AGTACT 1 cut(s) 3088
SchI GAGTC 6 cut(s) 907, 1240, 1612, 2420, 2597, 3002
ScrFI CCNGG 7 cut(s) 119, 974, 1198, 1247, 1360, 2703, 2937
SduI GDGCHC 6 cut(s) 885, 966, 2212, 2549, 2947, 2973
SfaNI GCATC 5 cut(s) 151, 2647, 2832, 2923, 3221
SfcI CTRYAG 5 cut(s) 156, 220, 811, 955, 1046
Sfr274I CTCGAG 2 cut(s) 1390, 1541
SfuI TTCGAA 1 cut(s) 1031
SinI GGWCC 4 cut(s) 785, 857, 1289, 2699
SlaI CTCGAG 2 cut(s) 1390, 1541
SmiMI CAYNNNNRTG 4 cut(s) 1563, 2646, 2670, 2687
SmlI CTYRAG 8 cut(s) 305, 313, 1172, 1315, 1390, 1541, 1840, 2542
SmoI CTYRAG 8 cut(s) 305, 313, 1172, 1315, 1390, 1541, 1840, 2542
SseBI AGGCCT 2 cut(s) 690, 2794
SsiI CCGC 8 cut(s) 217, 564, 1430, 1495, 2054, 2082, 2979, 3159
SstI GAGCTC 3 cut(s) 885, 966, 2549
StuI AGGCCT 2 cut(s) 690, 2794
StyD4I CCNGG 7 cut(s) 117, 972, 1196, 1245, 1358, 2701, 2935
StyI CCWWGG 4 cut(s) 650, 1765, 2479, 2608
TaaI ACNGT 6 cut(s) 143, 920, 970, 1643, 2553, 2876
TaiI ACGT 2 cut(s) 773, 2691
TatI WGTACW 4 cut(s) 831, 1398, 2871, 3086
TauI GCSGC 3 cut(s) 567, 2057, 2981
TfiI GAWTC 8 cut(s) 19, 340, 646, 1150, 1414, 1702, 1813, 3278
TscAI CASTG 5 cut(s) 352, 964, 2391, 2539, 3103
TseFI GTSAC 4 cut(s) 241, 404, 2045, 2356
TseI GCWGC 6 cut(s) 219, 222, 298, 954, 1045, 3052
Tsp45I GTSAC 4 cut(s) 241, 404, 2045, 2356
TspGWI ACGGA 1 cut(s) 2195
TspRI CASTG 5 cut(s) 352, 964, 2391, 2539, 3103
Tth111I GACNNNGTC 1 cut(s) 2294
Van91I CCANNNNNTGG 1 cut(s) 2272
Vha464I CTTAAG 2 cut(s) 313, 1840
VneI GTGCAC 1 cut(s) 2943
VpaK11BI GGWCC 4 cut(s) 785, 857, 1289, 2699
XapI RAATTY 7 cut(s) 292, 481, 1121, 1827, 2276, 2302, 3141
XbaI TCTAGA 1 cut(s) 2591
XceI RCATGY 1 cut(s) 3152
XhoI CTCGAG 2 cut(s) 1390, 1541
XmaJI CCTAGG 1 cut(s) 2608
XmiI GTMKAC 1 cut(s) 2349
XmnI GAANNNNTTC 3 cut(s) 23, 990, 1307
ZrmI AGTACT 1 cut(s) 3088
Zsp2I ATGCAT 1 cut(s) 3045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.