actin crosslink formation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT5G55400 AT5G55400 AT5G55400 |
| fragaria_vesca | FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 |
| malus_domestica | MD03G1190800.v1.1 MD04G1101600.v1.1 MD11G1207500.v1.1 |
| prunus_persica | Prupe.4G227900_v2.0.a1 |
| pyrus_communis | pycom03g14400 pycom03g14410 pycom11g18070 |
| rosa_chinensis | RchiOBHm_Chr5g0041891 |
| rosa_laevigata | RLG00000034102 RLG00000034103 |
| rosa_multiflora | Rmu_sc0009443.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00038650 |
| rosa_rugosa | Rorug05G0196900 Rorug05G0197000 |
| rosa_samantha | Rh5AG281500 Rh5BG287100 Rh5CG318700 Rh5DG295800 |
| rosa_wichuraiana | Rw0G001340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 509 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1229 |
| AccBSI | CCGCTC | 1 cut(s) | 1986 |
| AciI | CCGC | 5 cut(s) | 885, 1145, 1667, 1986, 2018 |
| AclWI | GGATC | 6 cut(s) | 26, 968, 981, 1069, 1211, 1819 |
| AcoI | YGGCCR | 2 cut(s) | 660, 2004 |
| AcsI | RAATTY | 1 cut(s) | 1400 |
| AcuI | CTGAAG | 3 cut(s) | 176, 1815, 1847 |
| AcyI | GRCGYC | 1 cut(s) | 746 |
| AdeI | CACNNNGTG | 2 cut(s) | 167, 682 |
| AfaI | GTAC | 5 cut(s) | 11, 340, 564, 720, 1853 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 669, 1564, 1663 |
| AflII | CTTAAG | 1 cut(s) | 845 |
| AjiI | CACGTC | 1 cut(s) | 1920 |
| AjnI | CCWGG | 2 cut(s) | 657, 678 |
| AleI | CACNNNNGTG | 1 cut(s) | 233 |
| Alw21I | GWGCWC | 3 cut(s) | 687, 1910, 1925 |
| Alw26I | GTCTC | 9 cut(s) | 608, 877, 1163, 1297, 1469, 1517, 1861, 1978, 2044 |
| Alw44I | GTGCAC | 1 cut(s) | 1921 |
| AlwI | GGATC | 6 cut(s) | 26, 968, 981, 1069, 1211, 1819 |
| Ama87I | CYCGRG | 2 cut(s) | 524, 1214 |
| AoxI | GGCC | 4 cut(s) | 660, 671, 1566, 2004 |
| ApaLI | GTGCAC | 1 cut(s) | 1921 |
| ApeKI | GCWGC | 1 cut(s) | 284 |
| ApoI | RAATTY | 1 cut(s) | 1400 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 249, 434, 996 |
| AspS9I | GGNCC | 2 cut(s) | 380, 1566 |
| AsuC2I | CCSGG | 3 cut(s) | 525, 526, 953 |
| AsuHPI | GGTGA | 8 cut(s) | 109, 668, 1693, 1721, 1822, 2000, 2023, 2024 |
| AvaI | CYCGRG | 2 cut(s) | 524, 1214 |
| AvaII | GGWCC | 1 cut(s) | 380 |
| BaeGI | GKGCMC | 1 cut(s) | 1925 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 34 |
| BamHI | GGATCC | 1 cut(s) | 973 |
| BauI | CACGAG | 1 cut(s) | 1996 |
| BbsI | GAAGAC | 4 cut(s) | 189, 749, 1167, 1853 |
| Bbv12I | GWGCWC | 3 cut(s) | 687, 1910, 1925 |
| BbvCI | CCTCAGC | 2 cut(s) | 750, 1559 |
| BbvI | GCAGC | 1 cut(s) | 296 |
| BccI | CCATC | 6 cut(s) | 479, 849, 1121, 1257, 1957, 2063 |
| BceAI | ACGGC | 4 cut(s) | 686, 1330, 1854, 1991 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1324, 1358 |
| BciT130I | CCWGG | 2 cut(s) | 659, 680 |
| BcnI | CCSGG | 3 cut(s) | 525, 526, 953 |
| BcoDI | GTCTC | 9 cut(s) | 608, 877, 1163, 1297, 1469, 1517, 1861, 1978, 2044 |
| BfaI | CTAG | 4 cut(s) | 203, 410, 962, 1529 |
| BfmI | CTRYAG | 2 cut(s) | 41, 1041 |
| BfrI | CTTAAG | 1 cut(s) | 845 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1088 |
| BglII | AGATCT | 2 cut(s) | 130, 1517 |
| BisI | GCNGC | 1 cut(s) | 285 |
| BlsI | GCNGC | 1 cut(s) | 286 |
| BmcAI | AGTACT | 1 cut(s) | 720 |
| Bme1390I | CCNGG | 5 cut(s) | 525, 526, 659, 680, 953 |
| Bme18I | GGWCC | 1 cut(s) | 380 |
| BmeT110I | CYCGRG | 2 cut(s) | 524, 1214 |
| BmgBI | CACGTC | 1 cut(s) | 1920 |
| BmgT120I | GGNCC | 2 cut(s) | 380, 1566 |
| BmiI | GGNNCC | 2 cut(s) | 381, 975 |
| BmrFI | CCNGG | 5 cut(s) | 525, 526, 659, 680, 953 |
| BmrI | ACTGGG | 1 cut(s) | 1293 |
| BmsI | GCATC | 8 cut(s) | 617, 889, 955, 1178, 1332, 1537, 2005, 2060 |
| BmuI | ACTGGG | 1 cut(s) | 1293 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1626 |
| BpiI | GAAGAC | 4 cut(s) | 189, 749, 1167, 1853 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1958, 1990 |
| BpmI | CTGGAG | 1 cut(s) | 1876 |
| Bpu10I | CCTNAGC | 2 cut(s) | 750, 1559 |
| BpuEI | CTTGAG | 5 cut(s) | 42, 239, 788, 1295, 1490 |
| BpuMI | CCSGG | 3 cut(s) | 525, 526, 953 |
| BsaAI | YACGTR | 1 cut(s) | 13 |
| BsaHI | GRCGYC | 1 cut(s) | 746 |
| BsaI | GGTCTC | 3 cut(s) | 1297, 1469, 2044 |
| BsaJI | CCNNGG | 6 cut(s) | 35, 524, 572, 1213, 1704, 2034 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 669, 1564, 1663 |
| Bse118I | RCCGGY | 1 cut(s) | 1194 |
| Bse1I | ACTGG | 5 cut(s) | 49, 1299, 1316, 1694, 1859 |
| BseBI | CCWGG | 2 cut(s) | 659, 680 |
| BseDI | CCNNGG | 6 cut(s) | 35, 524, 572, 1213, 1704, 2034 |
| BseGI | GGATG | 8 cut(s) | 317, 421, 632, 837, 904, 1132, 1268, 2051 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 669, 1564, 1663 |
| BseMII | CTCAG | 9 cut(s) | 279, 764, 788, 801, 1015, 1528, 1573, 1916, 2055 |
| BseNI | ACTGG | 5 cut(s) | 49, 1299, 1316, 1694, 1859 |
| BseRI | GAGGAG | 5 cut(s) | 129, 803, 1061, 1966, 1979 |
| BseSI | GKGCMC | 1 cut(s) | 1925 |
| BseXI | GCAGC | 1 cut(s) | 296 |
| BseYI | CCCAGC | 1 cut(s) | 1563 |
| BshFI | GGCC | 4 cut(s) | 662, 673, 1568, 2006 |
| BsiHKAI | GWGCWC | 3 cut(s) | 687, 1910, 1925 |
| BsiHKCI | CYCGRG | 2 cut(s) | 524, 1214 |
| BsiSI | CCGG | 3 cut(s) | 525, 953, 1195 |
| BslFI | GGGAC | 3 cut(s) | 541, 1605, 1924 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 669, 1564, 1663 |
| BsmAI | GTCTC | 9 cut(s) | 608, 877, 1163, 1297, 1469, 1517, 1861, 1978, 2044 |
| BsmBI | CGTCTC | 1 cut(s) | 877 |
| BsmFI | GGGAC | 3 cut(s) | 541, 1605, 1924 |
| BsmI | GAATGC | 1 cut(s) | 1741 |
| BsnI | GGCC | 4 cut(s) | 662, 673, 1568, 2006 |
| Bso31I | GGTCTC | 3 cut(s) | 1297, 1469, 2044 |
| BsoBI | CYCGRG | 2 cut(s) | 524, 1214 |
| Bsp1286I | GDGCHC | 3 cut(s) | 687, 1910, 1925 |
| Bsp1407I | TGTACA | 1 cut(s) | 338 |
| Bsp19I | CCATGG | 1 cut(s) | 35 |
| BspACI | CCGC | 5 cut(s) | 885, 1145, 1667, 1986, 2018 |
| BspANI | GGCC | 4 cut(s) | 662, 673, 1568, 2006 |
| BspCNI | CTCAG | 9 cut(s) | 280, 763, 789, 802, 1014, 1527, 1572, 1915, 2054 |
| BspLI | GGNNCC | 2 cut(s) | 381, 975 |
| BspMAI | CTGCAG | 1 cut(s) | 1045 |
| BspPI | GGATC | 6 cut(s) | 26, 968, 981, 1069, 1211, 1819 |
| BspTI | CTTAAG | 1 cut(s) | 845 |
| BspTNI | GGTCTC | 3 cut(s) | 1297, 1469, 2044 |
| BsrBI | CCGCTC | 1 cut(s) | 1986 |
| BsrFI | RCCGGY | 1 cut(s) | 1194 |
| BsrGI | TGTACA | 1 cut(s) | 338 |
| BsrI | ACTGG | 5 cut(s) | 49, 1299, 1316, 1694, 1859 |
| BssAI | RCCGGY | 1 cut(s) | 1194 |
| BssECI | CCNNGG | 6 cut(s) | 35, 524, 572, 1213, 1704, 2034 |
| BssNI | GRCGYC | 1 cut(s) | 746 |
| BssSI | CACGAG | 1 cut(s) | 1996 |
| BssT1I | CCWWGG | 2 cut(s) | 35, 1704 |
| Bst2BI | CACGAG | 1 cut(s) | 1996 |
| Bst2UI | CCWGG | 2 cut(s) | 659, 680 |
| Bst4CI | ACNGT | 4 cut(s) | 871, 947, 1226, 2038 |
| Bst6I | CTCTTC | 3 cut(s) | 240, 1721, 1956 |
| BstACI | GRCGYC | 1 cut(s) | 746 |
| BstAFI | CTTAAG | 1 cut(s) | 845 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 167 |
| BstAUI | TGTACA | 1 cut(s) | 338 |
| BstBAI | YACGTR | 1 cut(s) | 13 |
| BstC8I | GCNNGC | 2 cut(s) | 1028, 1320 |
| BstDSI | CCRYGG | 3 cut(s) | 35, 572, 2034 |
| BstF5I | GGATG | 8 cut(s) | 317, 421, 632, 837, 904, 1132, 1268, 2051 |
| BstMAI | GTCTC | 9 cut(s) | 608, 877, 1163, 1297, 1469, 1517, 1861, 1978, 2044 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 167, 1088 |
| BstNI | CCWGG | 2 cut(s) | 659, 680 |
| BstNSI | RCATGY | 1 cut(s) | 1322 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1626 |
| BstSCI | CCNGG | 5 cut(s) | 523, 524, 657, 678, 951 |
| BstSFI | CTRYAG | 2 cut(s) | 41, 1041 |
| BstSLI | GKGCMC | 1 cut(s) | 1925 |
| BstV1I | GCAGC | 1 cut(s) | 296 |
| BstV2I | GAAGAC | 4 cut(s) | 189, 749, 1167, 1853 |
| BstX2I | RGATCY | 4 cut(s) | 130, 973, 1061, 1517 |
| BstYI | RGATCY | 4 cut(s) | 130, 973, 1061, 1517 |
| BsuRI | GGCC | 4 cut(s) | 662, 673, 1568, 2006 |
| BtgI | CCRYGG | 3 cut(s) | 35, 572, 2034 |
| BtgZI | GCGATG | 1 cut(s) | 792 |
| BtrI | CACGTC | 1 cut(s) | 1920 |
| BtsCI | GGATG | 8 cut(s) | 317, 421, 632, 837, 904, 1132, 1268, 2051 |
| BtsIMutI | CAGTG | 2 cut(s) | 228, 943 |
| Cac8I | GCNNGC | 2 cut(s) | 1028, 1320 |
| Cfr10I | RCCGGY | 1 cut(s) | 1194 |
| Cfr13I | GGNCC | 2 cut(s) | 380, 1566 |
| Cfr9I | CCCGGG | 1 cut(s) | 524 |
| CseI | GACGC | 1 cut(s) | 754 |
| CsiI | ACCWGGT | 1 cut(s) | 678 |
| Csp6I | GTAC | 5 cut(s) | 10, 339, 563, 719, 1852 |
| CviAII | CATG | 4 cut(s) | 36, 1007, 1103, 1319 |
| CviQI | GTAC | 5 cut(s) | 10, 339, 563, 719, 1852 |
| DraI | TTTAAA | 1 cut(s) | 738 |
| DraIII | CACNNNGTG | 2 cut(s) | 167, 682 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1229 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1229 |
| EaeI | YGGCCR | 2 cut(s) | 660, 2004 |
| Eam1104I | CTCTTC | 3 cut(s) | 240, 1721, 1956 |
| EarI | CTCTTC | 3 cut(s) | 240, 1721, 1956 |
| Eco130I | CCWWGG | 2 cut(s) | 35, 1704 |
| Eco31I | GGTCTC | 3 cut(s) | 1297, 1469, 2044 |
| Eco32I | GATATC | 3 cut(s) | 407, 1555, 1801 |
| Eco47I | GGWCC | 1 cut(s) | 380 |
| Eco57I | CTGAAG | 3 cut(s) | 176, 1815, 1847 |
| Eco88I | CYCGRG | 2 cut(s) | 524, 1214 |
| EcoO109I | RGGNCCY | 1 cut(s) | 380 |
| EcoRII | CCWGG | 2 cut(s) | 657, 678 |
| EcoRV | GATATC | 3 cut(s) | 407, 1555, 1801 |
| EcoT14I | CCWWGG | 2 cut(s) | 35, 1704 |
| EcoT22I | ATGCAT | 1 cut(s) | 1141 |
| ErhI | CCWWGG | 2 cut(s) | 35, 1704 |
| Esp3I | CGTCTC | 1 cut(s) | 877 |
| FaeI | CATG | 4 cut(s) | 39, 1010, 1106, 1322 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 51, 83, 1019, 1051 |
| FaqI | GGGAC | 3 cut(s) | 541, 1605, 1924 |
| FatI | CATG | 4 cut(s) | 35, 1006, 1102, 1318 |
| FauNDI | CATATG | 1 cut(s) | 1491 |
| Fnu4HI | GCNGC | 1 cut(s) | 285 |
| FokI | GGATG | 8 cut(s) | 304, 428, 639, 844, 911, 1139, 1275, 2038 |
| Fsp4HI | GCNGC | 1 cut(s) | 285 |
| FspBI | CTAG | 4 cut(s) | 203, 410, 962, 1529 |
| GluI | GCNGC | 1 cut(s) | 285 |
| GsaI | CCCAGC | 1 cut(s) | 1567 |
| GsuI | CTGGAG | 1 cut(s) | 1876 |
| HaeIII | GGCC | 4 cut(s) | 662, 673, 1568, 2006 |
| HapII | CCGG | 3 cut(s) | 525, 953, 1195 |
| HgaI | GACGC | 1 cut(s) | 754 |
| Hin1I | GRCGYC | 1 cut(s) | 746 |
| Hin1II | CATG | 4 cut(s) | 39, 1010, 1106, 1322 |
| HincII | GTYRAC | 2 cut(s) | 1309, 1899 |
| HindII | GTYRAC | 2 cut(s) | 1309, 1899 |
| HindIII | AAGCTT | 2 cut(s) | 333, 503 |
| HpaII | CCGG | 3 cut(s) | 525, 953, 1195 |
| HphI | GGTGA | 8 cut(s) | 109, 668, 1693, 1721, 1822, 2000, 2023, 2024 |
| Hpy166II | GTNNAC | 5 cut(s) | 54, 1309, 1687, 1899, 1923 |
| Hpy8I | GTNNAC | 5 cut(s) | 54, 1309, 1687, 1899, 1923 |
| Hpy99I | CGWCG | 2 cut(s) | 1897, 1921 |
| HpyAV | CCTTC | 8 cut(s) | 151, 370, 449, 503, 659, 889, 1052, 1667 |
| HpyCH4III | ACNGT | 4 cut(s) | 871, 947, 1226, 2038 |
| HpyCH4IV | ACGT | 3 cut(s) | 12, 1164, 1919 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 167, 1088 |
| HpySE526I | ACGT | 3 cut(s) | 12, 1164, 1919 |
| Hsp92I | GRCGYC | 1 cut(s) | 746 |
| Hsp92II | CATG | 4 cut(s) | 39, 1010, 1106, 1322 |
| LmnI | GCTCC | 1 cut(s) | 1500 |
| Lsp1109I | GCAGC | 1 cut(s) | 296 |
| LweI | GCATC | 8 cut(s) | 617, 889, 955, 1178, 1332, 1537, 2005, 2060 |
| MabI | ACCWGGT | 1 cut(s) | 678 |
| MaeI | CTAG | 4 cut(s) | 203, 410, 962, 1529 |
| MaeII | ACGT | 3 cut(s) | 12, 1164, 1919 |
| MaeIII | GTNAC | 7 cut(s) | 118, 857, 947, 1699, 1788, 1954, 1993 |
| MbiI | CCGCTC | 1 cut(s) | 1986 |
| MfeI | CAATTG | 2 cut(s) | 464, 531 |
| MflI | RGATCY | 4 cut(s) | 130, 973, 1061, 1517 |
| MhlI | GDGCHC | 3 cut(s) | 687, 1910, 1925 |
| MluCI | AATT | 9 cut(s) | 79, 209, 464, 531, 733, 992, 1400, 1598, 1830 |
| MlyI | GAGTC | 4 cut(s) | 67, 1519, 1636, 1867 |
| MmeI | TCCRAC | 3 cut(s) | 351, 604, 1522 |
| Mph1103I | ATGCAT | 1 cut(s) | 1141 |
| MroXI | GAANNNNTTC | 3 cut(s) | 249, 434, 996 |
| MseI | TTAA | 7 cut(s) | 177, 567, 639, 737, 846, 1338, 1835 |
| MslI | CAYNNNNRTG | 1 cut(s) | 233 |
| MspA1I | CMGCKG | 2 cut(s) | 287, 1563 |
| MspCI | CTTAAG | 1 cut(s) | 845 |
| MspI | CCGG | 3 cut(s) | 525, 953, 1195 |
| MspR9I | CCNGG | 5 cut(s) | 525, 526, 659, 680, 953 |
| MunI | CAATTG | 2 cut(s) | 464, 531 |
| Mva1269I | GAATGC | 1 cut(s) | 1741 |
| MvaI | CCWGG | 2 cut(s) | 659, 680 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 167, 1088 |
| NciI | CCSGG | 3 cut(s) | 525, 526, 953 |
| NcoI | CCATGG | 1 cut(s) | 35 |
| NdeI | CATATG | 1 cut(s) | 1491 |
| NlaIII | CATG | 4 cut(s) | 39, 1010, 1106, 1322 |
| NlaIV | GGNNCC | 2 cut(s) | 381, 975 |
| NmuCI | GTSAC | 5 cut(s) | 118, 947, 1699, 1954, 1993 |
| NsiI | ATGCAT | 1 cut(s) | 1141 |
| NspI | RCATGY | 1 cut(s) | 1322 |
| OliI | CACNNNNGTG | 1 cut(s) | 233 |
| PaeI | GCATGC | 1 cut(s) | 1322 |
| PctI | GAATGC | 1 cut(s) | 1741 |
| PdmI | GAANNNNTTC | 3 cut(s) | 249, 434, 996 |
| PfeI | GAWTC | 9 cut(s) | 103, 589, 712, 1075, 1267, 1485, 1693, 1813, 1889 |
| PflFI | GACNNNGTC | 1 cut(s) | 1289 |
| PkrI | GCNGC | 1 cut(s) | 286 |
| PleI | GAGTC | 4 cut(s) | 67, 1518, 1635, 1866 |
| PpsI | GAGTC | 4 cut(s) | 67, 1518, 1635, 1866 |
| Ppu21I | YACGTR | 1 cut(s) | 13 |
| PpuMI | RGGWCCY | 1 cut(s) | 380 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1626 |
| PsiI | TTATAA | 1 cut(s) | 509 |
| Psp5II | RGGWCCY | 1 cut(s) | 380 |
| Psp6I | CCWGG | 2 cut(s) | 657, 678 |
| PspFI | CCCAGC | 1 cut(s) | 1563 |
| PspGI | CCWGG | 2 cut(s) | 657, 678 |
| PspN4I | GGNNCC | 2 cut(s) | 381, 975 |
| PspPI | GGNCC | 2 cut(s) | 380, 1566 |
| PspPPI | RGGWCCY | 1 cut(s) | 380 |
| PstI | CTGCAG | 1 cut(s) | 1045 |
| PsuI | RGATCY | 4 cut(s) | 130, 973, 1061, 1517 |
| PsyI | GACNNNGTC | 1 cut(s) | 1289 |
| PvuII | CAGCTG | 2 cut(s) | 287, 1563 |
| RsaI | GTAC | 5 cut(s) | 11, 340, 564, 720, 1853 |
| RsaNI | GTAC | 5 cut(s) | 10, 339, 563, 719, 1852 |
| RseI | CAYNNNNRTG | 1 cut(s) | 233 |
| SaqAI | TTAA | 7 cut(s) | 177, 567, 639, 737, 846, 1338, 1835 |
| SatI | GCNGC | 1 cut(s) | 285 |
| Sau96I | GGNCC | 2 cut(s) | 380, 1566 |
| ScaI | AGTACT | 1 cut(s) | 720 |
| SchI | GAGTC | 4 cut(s) | 67, 1519, 1636, 1867 |
| ScrFI | CCNGG | 5 cut(s) | 525, 526, 659, 680, 953 |
| SduI | GDGCHC | 3 cut(s) | 687, 1910, 1925 |
| SexAI | ACCWGGT | 1 cut(s) | 678 |
| SfaNI | GCATC | 8 cut(s) | 617, 889, 955, 1178, 1332, 1537, 2005, 2060 |
| SfcI | CTRYAG | 2 cut(s) | 41, 1041 |
| SinI | GGWCC | 1 cut(s) | 380 |
| SmaI | CCCGGG | 1 cut(s) | 526 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 233 |
| SmlI | CTYRAG | 6 cut(s) | 57, 254, 767, 845, 1274, 1505 |
| SmoI | CTYRAG | 6 cut(s) | 57, 254, 767, 845, 1274, 1505 |
| SphI | GCATGC | 1 cut(s) | 1322 |
| Sse9I | AATT | 9 cut(s) | 79, 209, 464, 531, 733, 992, 1400, 1598, 1830 |
| SsiI | CCGC | 5 cut(s) | 885, 1145, 1667, 1986, 2018 |
| SspI | AATATT | 1 cut(s) | 643 |
| SspMI | CTAG | 4 cut(s) | 203, 410, 962, 1529 |
| StyD4I | CCNGG | 5 cut(s) | 523, 524, 657, 678, 951 |
| StyI | CCWWGG | 2 cut(s) | 35, 1704 |
| TaaI | ACNGT | 4 cut(s) | 871, 947, 1226, 2038 |
| TaiI | ACGT | 3 cut(s) | 15, 1167, 1922 |
| TaqI | TCGA | 5 cut(s) | 63, 786, 1608, 1634, 2058 |
| TaqII | GACCGA | 1 cut(s) | 1172 |
| TasI | AATT | 9 cut(s) | 79, 209, 464, 531, 733, 992, 1400, 1598, 1830 |
| TatI | WGTACW | 3 cut(s) | 338, 718, 1851 |
| TfiI | GAWTC | 9 cut(s) | 103, 589, 712, 1075, 1267, 1485, 1693, 1813, 1889 |
| Tru1I | TTAA | 7 cut(s) | 177, 567, 639, 737, 846, 1338, 1835 |
| Tru9I | TTAA | 7 cut(s) | 177, 567, 639, 737, 846, 1338, 1835 |
| TscAI | CASTG | 2 cut(s) | 235, 950 |
| TseFI | GTSAC | 5 cut(s) | 118, 947, 1699, 1954, 1993 |
| TseI | GCWGC | 1 cut(s) | 284 |
| Tsp45I | GTSAC | 5 cut(s) | 118, 947, 1699, 1954, 1993 |
| TspDTI | ATGAA | 6 cut(s) | 486, 552, 848, 1034, 1119, 1197 |
| TspGWI | ACGGA | 1 cut(s) | 561 |
| TspMI | CCCGGG | 1 cut(s) | 524 |
| TspRI | CASTG | 2 cut(s) | 235, 950 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1289 |
| Vha464I | CTTAAG | 1 cut(s) | 845 |
| VneI | GTGCAC | 1 cut(s) | 1921 |
| VpaK11BI | GGWCC | 1 cut(s) | 380 |
| XapI | RAATTY | 1 cut(s) | 1400 |
| XceI | RCATGY | 1 cut(s) | 1322 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1109 |
| XmaI | CCCGGG | 1 cut(s) | 524 |
| XmnI | GAANNNNTTC | 3 cut(s) | 249, 434, 996 |
| XspI | CTAG | 4 cut(s) | 203, 410, 962, 1529 |
| ZrmI | AGTACT | 1 cut(s) | 720 |
| Zsp2I | ATGCAT | 1 cut(s) | 1141 |