Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003512

Physical Location & Seq

Genomic Coordinates Forward (+)

19509086 .. 19513038

Gene Structure 3953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0196900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGTCAAAGGTTGACACAGTGTTGAATGAAATTGCAGGTTCCAGCGGAGAAGATGCTGGACGATGGGTGGCCGCCAGACGTAAGCTGGACATGGGTAGAGGAAAACTTGAGAGTGCGTTACAACCAAGTGGCAACATTTCGTATGATGCCGGAAAAAAAAAACAACAACTGACACTTTCAAAAATTCCCCAGTTCAAGGAGACGGTGAAGCAGCTTTCAGATGCGAAAGTGAAGGCCGTGGTGGAGGTGGGGTTTGGATTTATGCAATGCATAAGGGGGAACGATGTGGTTCCGCAAATATTTGAGGAAATGGTTAACAGTATTGACACGGAAGCATGCACGATAAGTTTGAAGGGTCCGATGCTTGGGGATGCTGGCAATATTGCAGTGGACAATTTGCGGTTCATTGTGCGTGATAGGGAAATTGTGGACGACACATTCATTATAGCGTACGTATTGTTGGCACTGGCCACTGTGATATGTCCTGGAACAAGTAATGCTGTCCAAAGTGGAATGTTGTTGCCTTTACTAGAGATGACGGGTATAGTACGCAAGAATTGGGCAAATTTCGCCGTGGACTACTTGATGGAGGGAATAAGAAATCACCGACAACACGGAACCCCGGTTGTGGCGGGATGTGCACTTTATCTGCAGCTGGTATATTGCGACAAAGTTGGTGAGAAGTTACTTCCGAAAGAGCGGCTGGTTGCACCGGTAATGGATTGGAGTCTTGGAGAGATAAATGAGTTGCTGGGAAGGTTAGTGGCAGACACAAAAAACAAGAAACATCCGGACAAAGCGGACAACTACAATAAGGGGAATAGTGTGGATAAGCCGGTGAAGGACGAGGAGTCCGTTGGATTCCCATTAAGAAAATCACTACATGAAGACATGTTTGATGTTATGTTGGACATGGGGAGGTTGAAAGATGATATGGCATACGTTAAGGAAATTGTAACCGTAATACCGACCAGAGTAACAGAGCTGACAAATGGGCTGTTGGTTTTGGCCGATTCCTTAATAAATGTGAAGGCAGACTGTGTTGCTGAGGTGAGAGAGGAGTTGGGATTCATGGGGATCACCAGGCATAAGAGGGACAAATGGGAAAATGCGGACAACAATGATATGGGCAAGGGGGCTGGAGTGGAGAAAGGAAATGAGGGGCAGAAGAACGAAGGGTGCATGGGAGGTGAACATATTGCAAATGAACATGCTGACAAACTAATGGTCCAACGACTGCATGGCAAAGGAAAGGCAATTGGGTCAGACTGTGGCAGGAGCCCAGTAGGAGTACAATGTCCGCAAGTGAAACTGTTTGGAGAAGAAGGCAGCGGCAAAGCCAGGGGTGTGAAGCGAACTCATTCACCTGCTGTTTGTGAGAAGACAAGTGATAAATATGACTACATCAAATACGTCATGGGGTATACGGGAATGGATGACGCAACATTTGGGTGCATTGGAGGATGTGTTGCCAGTCCATATAGATTGAAGCTGCCAATAGAAGATTTGGACGTCGCGATTATTGAGTTTGTGTTTTTGGACGGAAAGTATAGAGCAACTCATAATGACGATCACTCACTGGGCGAGTGGGTGGAGCACACAAGGGAAGTATGCAAGTTGGATAGGTTCAACGGTACGATTCATCAGTGCGAGAAGATTTTTTTGCCCGTCTATGAAGGGGAACTAAACAATGGCCATTGGTATCTAATTGTGGTGGACATGGTGAAAAGGATAGCAGAATTGTGGGATAGTGGAGGAGGAAAGCGCCTTAATGCTGGTCGACTATTAGTTATTTCCCAAGTGCTACAACACATTGACCGTGTCATGATGGTTGAGAACTTAAAGCAAAGCGGGAGAGGAAAAACGGTATCATATTTTGTTGCAGTTGAACCGCCTCGTGTCCCCAAACAAAGGAATTCGTACGACTGTGGGGTGTACGTTATGAAGAACATGCAGCACTATCGGCTGGATTGGGCAAATGGGTATGACTCTCACCAAATGCGAGCATCCATAATACTGGACTGTCTTAAAGCACCGAACAACGAGATGGCAAGAGCAATAGAAGATGTCATACAAGGGAGCTACTTAGCTGGGGAAGGGAGCGACTTAGCTGGGGAAGCTGGAATGAAGCAAGTTACGGTGGAGCATACCCCAGCAATACCTCATCCTTTTGAAGAATGGGGGTCTGACGACTTTCAGCTATTTGATAATGCGGCAGATTGGATTGGAGATGGCCTTAATTGGGGGAACAAAGACCCAAAAGTTATGAAAATGTCAGAGAAGGACAGTGGGAAAGAAGGAAGTCTGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0007623 GO:0008092 GO:0008150 GO:0009987 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0032432 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0048511 GO:0051015 GO:0051017 GO:0051639 GO:0051764 GO:0061572 GO:0071840 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

770

Amino Acids

85.27

Weight (kDa)

5.78

Isoelectric Point (pI)

28.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	544 - 654	4.9e-13	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003512)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT5G55400 AT5G55400 AT5G55400
fragaria_vesca	FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730
malus_domestica	MD03G1190800.v1.1 MD04G1101600.v1.1 MD11G1207500.v1.1
prunus_persica	Prupe.4G227900_v2.0.a1
pyrus_communis	pycom03g14400 pycom03g14410 pycom11g18070
rosa_chinensis	RchiOBHm_Chr5g0041891
rosa_laevigata	RLG00000034102 RLG00000034103
rosa_multiflora	Rmu_sc0009443.1_g000014
rosa_roxburghii	Rroxscaffold_1G00038650
rosa_rugosa	Rorug05G0196900 Rorug05G0197000
rosa_samantha	Rh5AG281500 Rh5BG287100 Rh5CG318700 Rh5DG295800
rosa_wichuraiana	Rw0G001340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1375
AatII	GACGTC	1 cut(s)	1515
Acc36I	ACCTGC	2 cut(s)	26, 1375
AccBSI	CCGCTC	1 cut(s)	700
AccI	GTMKAC	2 cut(s)	1424, 1780
AccII	CGCG	1 cut(s)	1517
AccIII	TCCGGA	1 cut(s)	790
AclWI	GGATC	1 cut(s)	1085
AcoI	YGGCCR	4 cut(s)	69, 468, 1008, 1693
AcsI	RAATTY	3 cut(s)	183, 565, 1915
AcyI	GRCGYC	1 cut(s)	1512
AfaI	GTAC	6 cut(s)	452, 549, 1293, 1636, 1922, 1937
AfiI	CCNNNNNNNGG	5 cut(s)	196, 365, 628, 1911, 2242
AflIII	ACRYGT	1 cut(s)	891
AgeI	ACCGGT	1 cut(s)	712
AgsI	TTSAA	9 cut(s)	25, 180, 196, 352, 925, 1489, 1630, 1889, 2174
AhdI	GACNNNNNGTC	1 cut(s)	850
AjnI	CCWGG	3 cut(s)	484, 1082, 1340
Alw21I	GWGCWC	2 cut(s)	643, 1599
Alw26I	GTCTC	1 cut(s)	194
Alw44I	GTGCAC	1 cut(s)	639
AlwI	GGATC	1 cut(s)	1085
Aor13HI	TCCGGA	1 cut(s)	790
AoxI	GGCC	6 cut(s)	69, 234, 468, 1008, 1693, 2233
ApaLI	GTGCAC	1 cut(s)	639
ApeKI	GCWGC	5 cut(s)	211, 652, 1329, 1492, 1954
ApoI	RAATTY	3 cut(s)	183, 565, 1915
ArsI	GACNNNNNNTTYG	4 cut(s)	1212, 1244, 1430, 1462
AsiGI	ACCGGT	1 cut(s)	712
Asp700I	GAANNNNTTC	1 cut(s)	1360
AspLEI	GCGC	1 cut(s)	1767
AspS9I	GGNCC	2 cut(s)	356, 1228
AsuC2I	CCSGG	1 cut(s)	623
AvaII	GGWCC	2 cut(s)	356, 1228
BaeGI	GKGCMC	1 cut(s)	643
BalI	TGGCCA	2 cut(s)	470, 1695
BanII	GRGCYC	1 cut(s)	1283
BarI	GAAGNNNNNNTAC	2 cut(s)	2055, 2087
BauI	CACGAG	1 cut(s)	1896
BbsI	GAAGAC	2 cut(s)	894, 1388
Bbv12I	GWGCWC	2 cut(s)	643, 1599
BbvCI	CCTCAGC	1 cut(s)	1047
BbvI	GCAGC	5 cut(s)	223, 664, 1341, 1479, 1966
BccI	CCATC	5 cut(s)	57, 580, 1822, 2041, 2225
BceAI	ACGGC	2 cut(s)	221, 557
BcgI	CGANNNNNNTGC	2 cut(s)	1943, 1977
BciT130I	CCWGG	3 cut(s)	486, 1084, 1342
BcnI	CCSGG	1 cut(s)	623
BcoDI	GTCTC	1 cut(s)	194
BfaI	CTAG	1 cut(s)	530
BfmI	CTRYAG	1 cut(s)	650
BfoI	RGCGCY	1 cut(s)	1768
BfuAI	ACCTGC	2 cut(s)	26, 1375
BisI	GCNGC	9 cut(s)	72, 212, 653, 701, 1330, 1333, 1493, 1955, 2214
BlsI	GCNGC	9 cut(s)	73, 213, 654, 702, 1331, 1334, 1494, 1956, 2215
Bme1390I	CCNGG	4 cut(s)	486, 623, 1084, 1342
Bme18I	GGWCC	2 cut(s)	356, 1228
BmeRI	GACNNNNNGTC	1 cut(s)	850
BmgT120I	GGNCC	2 cut(s)	356, 1228
BmiI	GGNNCC	5 cut(s)	40, 291, 357, 619, 1280
BmrFI	CCNGG	4 cut(s)	486, 623, 1084, 1342
BmrI	ACTGGG	3 cut(s)	184, 1277, 1589
BmsI	GCATC	6 cut(s)	43, 136, 211, 351, 361, 2015
BmuI	ACTGGG	3 cut(s)	184, 1277, 1589
BpiI	GAAGAC	2 cut(s)	894, 1388
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	1 cut(s)	1047
BpuEI	CTTGAG	1 cut(s)	128
BpuMI	CCSGG	1 cut(s)	623
BsaAI	YACGTR	1 cut(s)	454
BsaHI	GRCGYC	1 cut(s)	1512
BsaJI	CCNNGG	4 cut(s)	237, 573, 621, 1341
BsaWI	WCCGGW	2 cut(s)	712, 790
BsaXI	ACNNNNNCTCC	4 cut(s)	236, 266, 1452, 1482
Bsc4I	CCNNNNNNNGG	5 cut(s)	196, 365, 628, 1911, 2242
Bse118I	RCCGGY	2 cut(s)	712, 835
Bse1I	ACTGG	6 cut(s)	190, 471, 1283, 1473, 1584, 2022
Bse3DI	GCAATG	1 cut(s)	272
BseAI	TCCGGA	1 cut(s)	790
BseBI	CCWGG	3 cut(s)	486, 1084, 1342
BseDI	CCNNGG	4 cut(s)	237, 573, 621, 1341
BseGI	GGATG	7 cut(s)	376, 641, 787, 1441, 1469, 2006, 2164
BseLI	CCNNNNNNNGG	5 cut(s)	196, 365, 628, 1911, 2242
BseMI	GCAATG	1 cut(s)	272
BseMII	CTCAG	1 cut(s)	1038
BseNI	ACTGG	6 cut(s)	190, 471, 1283, 1473, 1584, 2022
BseRI	GAGGAG	3 cut(s)	863, 1073, 1770
BseSI	GKGCMC	1 cut(s)	643
BseXI	GCAGC	5 cut(s)	223, 664, 1341, 1479, 1966
BseYI	CCCAGC	4 cut(s)	751, 2090, 2111, 2152
Bsh1236I	CGCG	1 cut(s)	1517
BshFI	GGCC	6 cut(s)	71, 236, 470, 1010, 1695, 2235
BshTI	ACCGGT	1 cut(s)	712
BsiHKAI	GWGCWC	2 cut(s)	643, 1599
BsiSI	CCGG	5 cut(s)	150, 623, 713, 791, 836
BsiWI	CGTACG	2 cut(s)	450, 1920
BslFI	GGGAC	2 cut(s)	1109, 1886
BslI	CCNNNNNNNGG	5 cut(s)	196, 365, 628, 1911, 2242
BsmAI	GTCTC	1 cut(s)	194
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	2 cut(s)	1109, 1886
BsnI	GGCC	6 cut(s)	71, 236, 470, 1010, 1695, 2235
Bsp1286I	GDGCHC	3 cut(s)	643, 1283, 1599
Bsp13I	TCCGGA	1 cut(s)	790
Bsp143I	GATC	2 cut(s)	1077, 1570
Bsp68I	TCGCGA	1 cut(s)	1517
BspANI	GGCC	6 cut(s)	71, 236, 470, 1010, 1695, 2235
BspCNI	CTCAG	1 cut(s)	1039
BspEI	TCCGGA	1 cut(s)	790
BspFNI	CGCG	1 cut(s)	1517
BspHI	TCATGA	1 cut(s)	1824
BspLI	GGNNCC	5 cut(s)	40, 291, 357, 619, 1280
BspMAI	CTGCAG	1 cut(s)	654
BspMI	ACCTGC	2 cut(s)	26, 1375
BspPI	GGATC	1 cut(s)	1085
BsrBI	CCGCTC	1 cut(s)	700
BsrDI	GCAATG	1 cut(s)	272
BsrFI	RCCGGY	2 cut(s)	712, 835
BsrI	ACTGG	6 cut(s)	190, 471, 1283, 1473, 1584, 2022
BssAI	RCCGGY	2 cut(s)	712, 835
BssECI	CCNNGG	4 cut(s)	237, 573, 621, 1341
BssMI	GATC	2 cut(s)	1077, 1570
BssNAI	GTATAC	1 cut(s)	1425
BssNI	GRCGYC	1 cut(s)	1512
BssSI	CACGAG	1 cut(s)	1896
Bst1107I	GTATAC	1 cut(s)	1425
Bst2BI	CACGAG	1 cut(s)	1896
Bst2UI	CCWGG	3 cut(s)	486, 1084, 1342
BstACI	GRCGYC	1 cut(s)	1512
BstBAI	YACGTR	1 cut(s)	454
BstC8I	GCNNGC	3 cut(s)	337, 376, 2004
BstDEI	CTNAG	3 cut(s)	1047, 2086, 2107
BstDSI	CCRYGG	2 cut(s)	237, 573
BstF5I	GGATG	7 cut(s)	376, 641, 787, 1441, 1469, 2006, 2164
BstFNI	CGCG	1 cut(s)	1517
BstH2I	RGCGCY	1 cut(s)	1768
BstHHI	GCGC	1 cut(s)	1767
BstKTI	GATC	2 cut(s)	1080, 1573
BstMAI	GTCTC	1 cut(s)	194
BstMBI	GATC	2 cut(s)	1077, 1570
BstMWI	GCNNNNNNNGC	4 cut(s)	569, 638, 1963, 2117
BstNI	CCWGG	3 cut(s)	486, 1084, 1342
BstNSI	RCATGY	4 cut(s)	339, 895, 1214, 1954
BstSCI	CCNGG	4 cut(s)	484, 621, 1082, 1340
BstSFI	CTRYAG	1 cut(s)	650
BstSLI	GKGCMC	1 cut(s)	643
BstSNI	TACGTA	1 cut(s)	454
BstUI	CGCG	1 cut(s)	1517
BstV1I	GCAGC	5 cut(s)	223, 664, 1341, 1479, 1966
BstV2I	GAAGAC	2 cut(s)	894, 1388
BstXI	CCANNNNNNTGG	1 cut(s)	2017
BstZ17I	GTATAC	1 cut(s)	1425
BsuRI	GGCC	6 cut(s)	71, 236, 470, 1010, 1695, 2235
BtgI	CCRYGG	2 cut(s)	237, 573
BtsCI	GGATG	7 cut(s)	376, 641, 787, 1441, 1469, 2006, 2164
BtsI	GCAGTG	1 cut(s)	393
BtsIMutI	CAGTG	7 cut(s)	24, 393, 464, 471, 1577, 1652, 2293
BtuMI	TCGCGA	1 cut(s)	1517
BveI	ACCTGC	2 cut(s)	26, 1375
Cac8I	GCNNGC	3 cut(s)	337, 376, 2004
CciI	TCATGA	1 cut(s)	1824
CfoI	GCGC	1 cut(s)	1767
Cfr10I	RCCGGY	2 cut(s)	712, 835
Cfr13I	GGNCC	2 cut(s)	356, 1228
CseI	GACGC	1 cut(s)	1448
Csp6I	GTAC	6 cut(s)	451, 548, 1292, 1635, 1921, 1936
CspAI	ACCGGT	1 cut(s)	712
CviQI	GTAC	6 cut(s)	451, 548, 1292, 1635, 1921, 1936
DdeI	CTNAG	3 cut(s)	1047, 2086, 2107
DpnI	GATC	2 cut(s)	1079, 1572
DpnII	GATC	2 cut(s)	1077, 1570
DriI	GACNNNNNGTC	1 cut(s)	850
EaeI	YGGCCR	4 cut(s)	69, 468, 1008, 1693
Eam1105I	GACNNNNNGTC	1 cut(s)	850
Eco105I	TACGTA	1 cut(s)	454
Eco24I	GRGCYC	1 cut(s)	1283
Eco47I	GGWCC	2 cut(s)	356, 1228
EcoRI	GAATTC	1 cut(s)	1915
EcoRII	CCWGG	3 cut(s)	484, 1082, 1340
EcoT22I	ATGCAT	1 cut(s)	272
EcoT38I	GRGCYC	1 cut(s)	1283
Esp3I	CGTCTC	1 cut(s)	194
FaqI	GGGAC	2 cut(s)	1109, 1886
FauI	CCCGC	2 cut(s)	625, 1844
FblI	GTMKAC	2 cut(s)	1424, 1780
Fnu4HI	GCNGC	9 cut(s)	72, 212, 653, 701, 1330, 1333, 1493, 1955, 2214
FokI	GGATG	7 cut(s)	383, 648, 774, 1448, 1476, 1993, 2151
FriOI	GRGCYC	1 cut(s)	1283
Fsp4HI	GCNGC	9 cut(s)	72, 212, 653, 701, 1330, 1333, 1493, 1955, 2214
FspBI	CTAG	1 cut(s)	530
GlaI	GCGC	1 cut(s)	1766
GluI	GCNGC	9 cut(s)	72, 212, 653, 701, 1330, 1333, 1493, 1955, 2214
GsaI	CCCAGC	4 cut(s)	755, 2094, 2115, 2156
GsuI	CTGGAG	1 cut(s)	1161
HaeII	RGCGCY	1 cut(s)	1768
HaeIII	GGCC	6 cut(s)	71, 236, 470, 1010, 1695, 2235
HapII	CCGG	5 cut(s)	150, 623, 713, 791, 836
HgaI	GACGC	1 cut(s)	1448
HhaI	GCGC	1 cut(s)	1767
Hin1I	GRCGYC	1 cut(s)	1512
Hin6I	GCGC	1 cut(s)	1765
HinP1I	GCGC	1 cut(s)	1765
HincII	GTYRAC	3 cut(s)	13, 316, 1781
HindII	GTYRAC	3 cut(s)	13, 316, 1781
HinfI	GANTC	7 cut(s)	727, 851, 861, 1013, 1068, 1639, 1988
HpaI	GTTAAC	1 cut(s)	316
HpaII	CCGG	5 cut(s)	150, 623, 713, 791, 836
Hpy188I	TCNGA	6 cut(s)	220, 360, 693, 1267, 2188, 2278
Hpy188III	TCNNGA	3 cut(s)	791, 1516, 1825
Hpy99I	CGWCG	1 cut(s)	1517
HpyCH4IV	ACGT	6 cut(s)	79, 453, 942, 1413, 1512, 1938
HpyF10VI	GCNNNNNNNGC	4 cut(s)	569, 638, 1963, 2117
HpyF3I	CTNAG	3 cut(s)	1047, 2086, 2107
HpySE526I	ACGT	6 cut(s)	79, 453, 942, 1413, 1512, 1938
Hsp92I	GRCGYC	1 cut(s)	1512
HspAI	GCGC	1 cut(s)	1765
Kpn2I	TCCGGA	1 cut(s)	790
KspAI	GTTAAC	1 cut(s)	316
Kzo9I	GATC	2 cut(s)	1077, 1570
LmnI	GCTCC	5 cut(s)	1278, 1594, 2079, 2100, 2143
Lsp1109I	GCAGC	5 cut(s)	223, 664, 1341, 1479, 1966
LweI	GCATC	6 cut(s)	43, 136, 211, 351, 361, 2015
MaeI	CTAG	1 cut(s)	530
MaeII	ACGT	6 cut(s)	79, 453, 942, 1413, 1512, 1938
MaeIII	GTNAC	5 cut(s)	117, 684, 955, 976, 2134
MalI	GATC	2 cut(s)	1079, 1572
MbiI	CCGCTC	1 cut(s)	700
MboI	GATC	2 cut(s)	1077, 1570
MfeI	CAATTG	1 cut(s)	1257
MhlI	GDGCHC	3 cut(s)	643, 1283, 1599
MlsI	TGGCCA	2 cut(s)	470, 1695
MluNI	TGGCCA	2 cut(s)	470, 1695
MlyI	GAGTC	3 cut(s)	736, 860, 1982
MmeI	TCCRAC	4 cut(s)	838, 888, 1255, 1599
Mox20I	TGGCCA	2 cut(s)	470, 1695
Mph1103I	ATGCAT	1 cut(s)	272
MroI	TCCGGA	1 cut(s)	790
MroXI	GAANNNNTTC	1 cut(s)	1360
MscI	TGGCCA	2 cut(s)	470, 1695
MseI	TTAA	8 cut(s)	315, 869, 945, 1019, 1770, 1841, 2028, 2238
MslI	CAYNNNNRTG	1 cut(s)	1450
Msp20I	TGGCCA	2 cut(s)	470, 1695
MspA1I	CMGCKG	3 cut(s)	45, 655, 1332
MspI	CCGG	5 cut(s)	150, 623, 713, 791, 836
MspR9I	CCNGG	4 cut(s)	486, 623, 1084, 1342
MunI	CAATTG	1 cut(s)	1257
MvaI	CCWGG	3 cut(s)	486, 1084, 1342
MvnI	CGCG	1 cut(s)	1517
MwoI	GCNNNNNNNGC	4 cut(s)	569, 638, 1963, 2117
NciI	CCSGG	1 cut(s)	623
NdeII	GATC	2 cut(s)	1077, 1570
NlaIV	GGNNCC	5 cut(s)	40, 291, 357, 619, 1280
NruI	TCGCGA	1 cut(s)	1517
NsiI	ATGCAT	1 cut(s)	272
NspI	RCATGY	4 cut(s)	339, 895, 1214, 1954
PaeI	GCATGC	1 cut(s)	339
PagI	TCATGA	1 cut(s)	1824
PaqCI	CACCTGC	1 cut(s)	1375
PciI	ACATGT	1 cut(s)	891
PcsI	WCGNNNNNNNCGW	1 cut(s)	852
PdmI	GAANNNNTTC	1 cut(s)	1360
PfeI	GAWTC	4 cut(s)	861, 1013, 1068, 1639
Pfl23II	CGTACG	2 cut(s)	450, 1920
PflFI	GACNNNGTC	1 cut(s)	1820
PfoI	TCCNGGA	1 cut(s)	484
PinAI	ACCGGT	1 cut(s)	712
PkrI	GCNGC	9 cut(s)	73, 213, 654, 702, 1331, 1334, 1494, 1956, 2215
PleI	GAGTC	3 cut(s)	735, 859, 1982
PpsI	GAGTC	3 cut(s)	735, 859, 1982
Ppu21I	YACGTR	1 cut(s)	454
PscI	ACATGT	1 cut(s)	891
Psp6I	CCWGG	3 cut(s)	484, 1082, 1340
PspFI	CCCAGC	4 cut(s)	751, 2090, 2111, 2152
PspGI	CCWGG	3 cut(s)	484, 1082, 1340
PspLI	CGTACG	2 cut(s)	450, 1920
PspN4I	GGNNCC	5 cut(s)	40, 291, 357, 619, 1280
PspPI	GGNCC	2 cut(s)	356, 1228
PstI	CTGCAG	1 cut(s)	654
PsyI	GACNNNGTC	1 cut(s)	1820
PvuII	CAGCTG	1 cut(s)	655
RruI	TCGCGA	1 cut(s)	1517
RsaI	GTAC	6 cut(s)	452, 549, 1293, 1636, 1922, 1937
RsaNI	GTAC	6 cut(s)	451, 548, 1292, 1635, 1921, 1936
RseI	CAYNNNNRTG	1 cut(s)	1450
SalI	GTCGAC	1 cut(s)	1779
SaqAI	TTAA	8 cut(s)	315, 869, 945, 1019, 1770, 1841, 2028, 2238
SatI	GCNGC	9 cut(s)	72, 212, 653, 701, 1330, 1333, 1493, 1955, 2214
Sau3AI	GATC	2 cut(s)	1077, 1570
Sau96I	GGNCC	2 cut(s)	356, 1228
SchI	GAGTC	3 cut(s)	736, 860, 1982
ScrFI	CCNGG	4 cut(s)	486, 623, 1084, 1342
SduI	GDGCHC	3 cut(s)	643, 1283, 1599
SfaNI	GCATC	6 cut(s)	43, 136, 211, 351, 361, 2015
SfcI	CTRYAG	1 cut(s)	650
SinI	GGWCC	2 cut(s)	356, 1228
SmiMI	CAYNNNNRTG	1 cut(s)	1450
SmlI	CTYRAG	1 cut(s)	107
SmoI	CTYRAG	1 cut(s)	107
SnaBI	TACGTA	1 cut(s)	454
SphI	GCATGC	1 cut(s)	339
SspI	AATATT	2 cut(s)	300, 382
SspMI	CTAG	1 cut(s)	530
StyD4I	CCNGG	4 cut(s)	484, 621, 1082, 1340
TaiI	ACGT	6 cut(s)	82, 456, 945, 1416, 1515, 1941
TaqI	TCGA	1 cut(s)	1780
TatI	WGTACW	1 cut(s)	1291
TauI	GCSGC	4 cut(s)	74, 703, 1335, 2216
TfiI	GAWTC	4 cut(s)	861, 1013, 1068, 1639
Tru1I	TTAA	8 cut(s)	315, 869, 945, 1019, 1770, 1841, 2028, 2238
Tru9I	TTAA	8 cut(s)	315, 869, 945, 1019, 1770, 1841, 2028, 2238
TscAI	CASTG	7 cut(s)	24, 393, 471, 478, 1584, 1652, 2293
TseI	GCWGC	5 cut(s)	211, 652, 1329, 1492, 1954
TspGWI	ACGGA	4 cut(s)	344, 630, 844, 1557
TspRI	CASTG	7 cut(s)	24, 393, 471, 478, 1584, 1652, 2293
Tth111I	GACNNNGTC	1 cut(s)	1820
VneI	GTGCAC	1 cut(s)	639
VpaK11BI	GGWCC	2 cut(s)	356, 1228
XapI	RAATTY	3 cut(s)	183, 565, 1915
XceI	RCATGY	4 cut(s)	339, 895, 1214, 1954
XcmI	CCANNNNNNNNNTGG	2 cut(s)	82, 1238
XmiI	GTMKAC	2 cut(s)	1424, 1780
XmnI	GAANNNNTTC	1 cut(s)	1360
XspI	CTAG	1 cut(s)	530
ZraI	GACGTC	1 cut(s)	1513
Zsp2I	ATGCAT	1 cut(s)	272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.