Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00043

Orthogroup ID

OG0003512

Physical Location & Seq

Genomic Coordinates Reverse (-)

26498 .. 31488

Gene Structure 4991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G001340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGTCGAGTTATGCAGGTGTGCACATTTCTGATCAGTGGCTTCAAAGCCAGTTCACGCAGGTTGAGCTTCGCAGTTTGGAATCCAAATTTACTTCAGTGAAGAATCAGAATGGCATAGTCACTGCTGGAGATTTGCCAGCTTTAATGGTGACATCAAAGGCATTTAAAGAAACGCATTCTGAGGAGGAGATTAGGAACATCTTAAGTGGGTTGGGTTCTAACTTGAGTGATGAAATTGACTTTGAATCTTTCCTTAAGGCATACTTGAATTTGCAAGGTCAAACAACAGTAAAATCTGGTGGTTCAAAGAACTCTTGGTCATTCTTGAAGGCTTCCACTACTACCCTACTTCACACCATCAGTGAATCAGAGAAAGCATCTTATGTTGCTCACATAAACAGTTATCTCGGTGATGACCCATTTCTACAGCATAAGCTTATAAATGTTGCTGTGCCCGGGACAATAGATGAAAGAGCAATTAACACCAAACGGATCCTCAACCCCTGGGAGAGGAATGAAAACCATACTCTCTGCCTCAACTCTGCCAAGGCCATTGGCTGCACGGTGGTTAATATTGGCACACAAGACCTGGTTGAAGGAAGACCTCATCTGGTATTGGGATTGATTTCTCAAATAATAAAGATCCAACTGTTGGCAGATCTGAACCTTAAGAAGACTCCTCAGCTTGTGGAATTGGTAGATGATAGCAAGGATGTTGAAGAGCTTTTGAGTTTACCACCTGAGAAGGTCTTATTGAAGTGGATGAATTTCCATCTCCAGAAAGCAGGCTACAAGAAGGCAGTTGCAAACTTCTCTTCTGATCTGAAGGATGGAGAGGCTTATGCGTATCTTCTTAATGTTCTTGCTCCAGAACACTGCAATCCAGCCACATTGGATGCCAAACCCGACGAAAGAGCAAAATTGGTTCTTGATCATGCCGAGAGAATGAACTGCAAAAGATATTTATCCCCAAAAGACATTATTGAGGGTTCTTCAAACTTAAATCTGGCATTTGTGGCACAGATCTTCCATGAAAGGAATGGTCTCTCTGCAGACAGCAAAAAGATATCTTTTGCAGAGATGATGACAGATGATGTTCAAACATCACGAGAAGAGAGATGCTTCAGGCTGTGGATCAACAGTCTAGGCATTGTGAGTTACGTTAATAATGTATTCGAGGATGTGAGAAATGGATGGATTCTCTTAGAAGTGCTTGATAAGGTTTCTCCAGGATCAGTTAACTGGAAGCAAGCATCAAGGCCTCCAATCAAGATGCCATTTAGGAAAGTAGAGAATTGCAATCAGGTTGTAAGGATTGGGAAGCAGCTCAAATTTTCTCTGGTGAATGTAGCTGGAAATGATATTGTGCAGGGAAACAAGAAGCTCATACTTGCTTTTCTATGGCAGTTGATGAGGTTTAATATGCTTCAACTTTTGAGGAATCTAAGATCTCACTCCCGAGGAAAGGAGATGACAGATGCAGATATTTTAAAGTGGGCTAACAACAAAGTTAAAAGCACGGGCAGAACTTCTCGAATGGAGAGTTTTAAGGATAAGAGCCTGTCGAATGGGATTTTCTTCCTTGAGCTTCTCAGTGCTGTGGAGCCTAGGGTTGTCAATTGGAACCTTGTTACCAAGGGTGAAAGTGCTGATGAAAAGAAGTTAAATGCTACGTACATAGTCAGTGTTGCGCGAAAGCTTGGTTGTTCCATTTTCTTGTTGCCTGAGGACATCATGGAGGTGAACCAGAAGATGCTTCTGACTCTAACAGCCAGCATTATGTTTTGGAGCCTGCAACAACCAGTTGATGACTCGGAAGCATCTCCATCCCCTGCGGATGTGTCACCTGCAACATCAATCAGTGGCGAGGATGAAGGGACTTCTTCCCTCGGTGGTGAAATTTCAAACTTGAGTATTGACGACACTGCTTCTGAAGTCTCCTCACAGCTCGACACTGAGGTCACTTCTTTTGAAGATGGGAGCAGGGTGGAAGAGACTGGTTGCATATCTGTTAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0007623 GO:0008092 GO:0008150 GO:0009987 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0032432 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0048511 GO:0051015 GO:0051017 GO:0051639 GO:0051764 GO:0061572 GO:0071840 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

672

Amino Acids

74.76

Weight (kDa)

5.79

Isoelectric Point (pI)

39.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	145 - 214	2.3e-10	Calponin homology (CH) domain
CH	PF00307	246 - 345	1.3e-22	Calponin homology (CH) domain
CH	PF00307	372 - 473	2.3e-17	Calponin homology (CH) domain
CH	PF00307	493 - 594	5.2e-18	Calponin homology (CH) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003512)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT4G26700 AT5G55400 AT5G55400 AT5G55400
fragaria_vesca	FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730 FvH4_3g23730
malus_domestica	MD03G1190800.v1.1 MD04G1101600.v1.1 MD11G1207500.v1.1
prunus_persica	Prupe.4G227900_v2.0.a1
pyrus_communis	pycom03g14400 pycom03g14410 pycom11g18070
rosa_chinensis	RchiOBHm_Chr5g0041891
rosa_laevigata	RLG00000034102 RLG00000034103
rosa_multiflora	Rmu_sc0009443.1_g000014
rosa_roxburghii	Rroxscaffold_1G00038650
rosa_rugosa	Rorug05G0196900 Rorug05G0197000
rosa_samantha	Rh5AG281500 Rh5BG287100 Rh5CG318700 Rh5DG295800
rosa_wichuraiana	Rw0G001340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	440
AarI	CACCTGC	2 cut(s)	5, 1855
AasI	GACNNNNNNGTC	1 cut(s)	1958
Acc36I	ACCTGC	3 cut(s)	5, 49, 1855
AccB7I	CCANNNNNTGG	1 cut(s)	652
AccII	CGCG	1 cut(s)	1693
AciI	CCGC	1 cut(s)	1835
AclWI	GGATC	5 cut(s)	487, 500, 637, 1142, 1240
AcsI	RAATTY	5 cut(s)	86, 268, 766, 1331, 1899
AcuI	CTGAAG	4 cut(s)	78, 845, 1108, 1953
AfaI	GTAC	1 cut(s)	1676
AfiI	CCNNNNNNNGG	3 cut(s)	510, 652, 1465
AflII	CTTAAG	3 cut(s)	202, 254, 668
AjnI	CCWGG	3 cut(s)	503, 588, 1228
Alw21I	GWGCWC	1 cut(s)	24
Alw26I	GTCTC	3 cut(s)	1049, 1942, 1988
Alw44I	GTGCAC	1 cut(s)	20
AlwI	GGATC	5 cut(s)	487, 500, 637, 1142, 1240
Ama87I	CYCGRG	2 cut(s)	455, 1458
AoxI	GGCC	2 cut(s)	549, 1259
ApaLI	GTGCAC	1 cut(s)	20
ApeKI	GCWGC	2 cut(s)	558, 1324
ApoI	RAATTY	5 cut(s)	86, 268, 766, 1331, 1899
AspA2I	CCTAGG	1 cut(s)	1607
AspLEI	GCGC	1 cut(s)	1693
AsuC2I	CCSGG	2 cut(s)	456, 457
AsuHPI	GGTGA	7 cut(s)	160, 422, 1354, 1652, 1753, 1836, 1907
AvaI	CYCGRG	2 cut(s)	455, 1458
AvrII	CCTAGG	1 cut(s)	1607
AxyI	CCTNAGG	1 cut(s)	1725
BaeGI	GKGCMC	2 cut(s)	24, 456
BamHI	GGATCC	1 cut(s)	492
BauI	CACGAG	1 cut(s)	1107
BbsI	GAAGAC	2 cut(s)	607, 680
Bbv12I	GWGCWC	1 cut(s)	24
BbvCI	CCTCAGC	1 cut(s)	681
BbvI	GCAGC	2 cut(s)	545, 1336
BccI	CCATC	6 cut(s)	365, 780, 824, 1188, 1834, 1970
BciT130I	CCWGG	3 cut(s)	505, 590, 1230
BclI	TGATCA	2 cut(s)	31, 931
BcnI	CCSGG	2 cut(s)	456, 457
BcoDI	GTCTC	3 cut(s)	1049, 1942, 1988
BfaI	CTAG	2 cut(s)	1145, 1608
BfmI	CTRYAG	2 cut(s)	425, 1050
BfrI	CTTAAG	3 cut(s)	202, 254, 668
BfuAI	ACCTGC	3 cut(s)	5, 49, 1855
BglII	AGATCT	3 cut(s)	658, 1023, 1448
BisI	GCNGC	2 cut(s)	559, 1325
BlnI	CCTAGG	1 cut(s)	1607
BlsI	GCNGC	2 cut(s)	560, 1326
Bme1390I	CCNGG	5 cut(s)	456, 457, 505, 590, 1230
BmeT110I	CYCGRG	2 cut(s)	455, 1458
BmiI	GGNNCC	4 cut(s)	494, 1605, 1625, 1790
BmrFI	CCNGG	5 cut(s)	456, 457, 505, 590, 1230
BmsI	GCATC	8 cut(s)	386, 886, 1109, 1262, 1263, 1468, 1743, 1829
BpiI	GAAGAC	2 cut(s)	607, 680
BpmI	CTGGAG	4 cut(s)	147, 761, 852, 1212
Bpu10I	CCTNAGC	1 cut(s)	681
BpuEI	CTTGAG	3 cut(s)	244, 1604, 1930
BpuMI	CCSGG	2 cut(s)	456, 457
BsaAI	YACGTR	1 cut(s)	1674
BsaBI	GATNNNNATC	1 cut(s)	964
BsaI	GGTCTC	1 cut(s)	1049
BsaJI	CCNNGG	8 cut(s)	455, 503, 504, 546, 1459, 1607, 1635, 1888
Bsc4I	CCNNNNNNNGG	3 cut(s)	510, 652, 1465
Bse1I	ACTGG	4 cut(s)	49, 1247, 1802, 2002
Bse21I	CCTNAGG	1 cut(s)	1725
Bse8I	GATNNNNATC	1 cut(s)	964
BseBI	CCWGG	3 cut(s)	505, 590, 1230
BseDI	CCNNGG	8 cut(s)	455, 503, 504, 546, 1459, 1607, 1635, 1888
BseGI	GGATG	9 cut(s)	718, 768, 835, 901, 1186, 1199, 1826, 1843, 1876
BseJI	GATNNNNATC	1 cut(s)	964
BseLI	CCNNNNNNNGG	3 cut(s)	510, 652, 1465
BseMII	CTCAG	6 cut(s)	171, 695, 732, 1606, 1716, 1947
BseNI	ACTGG	4 cut(s)	49, 1247, 1802, 2002
BseRI	GAGGAG	4 cut(s)	197, 200, 669, 1930
BseSI	GKGCMC	2 cut(s)	24, 456
BseXI	GCAGC	2 cut(s)	545, 1336
BsgI	GTGCAG	2 cut(s)	544, 1388
Bsh1236I	CGCG	1 cut(s)	1693
BshFI	GGCC	2 cut(s)	551, 1261
BsiHKAI	GWGCWC	1 cut(s)	24
BsiHKCI	CYCGRG	2 cut(s)	455, 1458
BsiSI	CCGG	1 cut(s)	456
BslFI	GGGAC	2 cut(s)	472, 1891
BslI	CCNNNNNNNGG	3 cut(s)	510, 652, 1465
BsmAI	GTCTC	3 cut(s)	1049, 1942, 1988
BsmFI	GGGAC	2 cut(s)	472, 1891
BsmI	GAATGC	1 cut(s)	175
BsnI	GGCC	2 cut(s)	551, 1261
Bso31I	GGTCTC	1 cut(s)	1049
BsoBI	CYCGRG	2 cut(s)	455, 1458
Bsp1286I	GDGCHC	2 cut(s)	24, 456
BspACI	CCGC	1 cut(s)	1835
BspANI	GGCC	2 cut(s)	551, 1261
BspCNI	CTCAG	6 cut(s)	172, 694, 733, 1605, 1717, 1948
BspFNI	CGCG	1 cut(s)	1693
BspLI	GGNNCC	4 cut(s)	494, 1605, 1625, 1790
BspMAI	CTGCAG	1 cut(s)	1054
BspMI	ACCTGC	3 cut(s)	5, 49, 1855
BspPI	GGATC	5 cut(s)	487, 500, 637, 1142, 1240
BspQI	GCTCTTC	1 cut(s)	714
BspTI	CTTAAG	3 cut(s)	202, 254, 668
BspTNI	GGTCTC	1 cut(s)	1049
BsrI	ACTGG	4 cut(s)	49, 1247, 1802, 2002
BssECI	CCNNGG	8 cut(s)	455, 503, 504, 546, 1459, 1607, 1635, 1888
BssSI	CACGAG	1 cut(s)	1107
BssT1I	CCWWGG	3 cut(s)	546, 1607, 1635
Bst2BI	CACGAG	1 cut(s)	1107
Bst2UI	CCWGG	3 cut(s)	505, 590, 1230
Bst4CI	ACNGT	5 cut(s)	289, 401, 565, 651, 1142
Bst6I	CTCTTC	4 cut(s)	714, 820, 1107, 1986
BstAFI	CTTAAG	3 cut(s)	202, 254, 668
BstBAI	YACGTR	1 cut(s)	1674
BstC8I	GCNNGC	5 cut(s)	138, 787, 1251, 1774, 1793
BstDEI	CTNAG	8 cut(s)	180, 681, 741, 1204, 1445, 1592, 1725, 1956
BstENI	CCTNNNNNAGG	1 cut(s)	508
BstF5I	GGATG	9 cut(s)	718, 768, 835, 901, 1186, 1199, 1826, 1843, 1876
BstFNI	CGCG	1 cut(s)	1693
BstHHI	GCGC	1 cut(s)	1693
BstMAI	GTCTC	3 cut(s)	1049, 1942, 1988
BstMWI	GCNNNNNNNGC	2 cut(s)	64, 1016
BstNI	CCWGG	3 cut(s)	505, 590, 1230
BstSCI	CCNGG	5 cut(s)	454, 455, 503, 588, 1228
BstSFI	CTRYAG	2 cut(s)	425, 1050
BstSLI	GKGCMC	2 cut(s)	24, 456
BstSNI	TACGTA	1 cut(s)	1674
BstUI	CGCG	1 cut(s)	1693
BstV1I	GCAGC	2 cut(s)	545, 1336
BstV2I	GAAGAC	2 cut(s)	607, 680
BstX2I	RGATCY	5 cut(s)	492, 642, 658, 1023, 1448
BstYI	RGATCY	5 cut(s)	492, 642, 658, 1023, 1448
Bsu36I	CCTNAGG	1 cut(s)	1725
BsuRI	GGCC	2 cut(s)	551, 1261
BtsCI	GGATG	9 cut(s)	718, 768, 835, 901, 1186, 1199, 1826, 1843, 1876
BtsI	GCAGTG	3 cut(s)	120, 874, 1923
BveI	ACCTGC	3 cut(s)	5, 49, 1855
Cac8I	GCNNGC	5 cut(s)	138, 787, 1251, 1774, 1793
CfoI	GCGC	1 cut(s)	1693
Cfr9I	CCCGGG	1 cut(s)	455
CsiI	ACCWGGT	1 cut(s)	588
Csp6I	GTAC	1 cut(s)	1675
CviAII	CATG	3 cut(s)	935, 1031, 1735
CviQI	GTAC	1 cut(s)	1675
DdeI	CTNAG	8 cut(s)	180, 681, 741, 1204, 1445, 1592, 1725, 1956
DraI	TTTAAA	2 cut(s)	166, 1491
DrdI	GACNNNNNNGTC	1 cut(s)	1958
DseDI	GACNNNNNNGTC	1 cut(s)	1958
Eam1104I	CTCTTC	4 cut(s)	714, 820, 1107, 1986
EarI	CTCTTC	4 cut(s)	714, 820, 1107, 1986
Eco105I	TACGTA	1 cut(s)	1674
Eco130I	CCWWGG	3 cut(s)	546, 1607, 1635
Eco147I	AGGCCT	1 cut(s)	1261
Eco31I	GGTCTC	1 cut(s)	1049
Eco32I	GATATC	1 cut(s)	1068
Eco57I	CTGAAG	4 cut(s)	78, 845, 1108, 1953
Eco81I	CCTNAGG	1 cut(s)	1725
Eco88I	CYCGRG	2 cut(s)	455, 1458
EcoNI	CCTNNNNNAGG	1 cut(s)	508
EcoRII	CCWGG	3 cut(s)	503, 588, 1228
EcoRV	GATATC	1 cut(s)	1068
EcoT14I	CCWWGG	3 cut(s)	546, 1607, 1635
ErhI	CCWWGG	3 cut(s)	546, 1607, 1635
FaeI	CATG	3 cut(s)	938, 1034, 1738
FalI	AAGNNNNNCTT	2 cut(s)	248, 280
FaqI	GGGAC	2 cut(s)	472, 1891
FatI	CATG	3 cut(s)	934, 1030, 1734
FbaI	TGATCA	2 cut(s)	31, 931
Fnu4HI	GCNGC	2 cut(s)	559, 1325
FokI	GGATG	9 cut(s)	725, 775, 842, 908, 1193, 1206, 1813, 1850, 1883
Fsp4HI	GCNGC	2 cut(s)	559, 1325
FspBI	CTAG	2 cut(s)	1145, 1608
GlaI	GCGC	1 cut(s)	1692
GluI	GCNGC	2 cut(s)	559, 1325
GsuI	CTGGAG	4 cut(s)	147, 761, 852, 1212
HaeIII	GGCC	2 cut(s)	551, 1261
HapII	CCGG	1 cut(s)	456
HhaI	GCGC	1 cut(s)	1693
Hin1II	CATG	3 cut(s)	938, 1034, 1738
Hin6I	GCGC	1 cut(s)	1691
HinP1I	GCGC	1 cut(s)	1691
HincII	GTYRAC	1 cut(s)	1240
HindII	GTYRAC	1 cut(s)	1240
HindIII	AAGCTT	2 cut(s)	434, 1697
HinfI	GANTC	9 cut(s)	80, 103, 245, 365, 676, 1198, 1441, 1762, 1811
HpaI	GTTAAC	1 cut(s)	1240
HpaII	CCGG	1 cut(s)	456
HphI	GGTGA	7 cut(s)	160, 422, 1354, 1652, 1753, 1836, 1907
Hpy166II	GTNNAC	5 cut(s)	22, 54, 734, 1240, 1744
Hpy188III	TCNNGA	8 cut(s)	325, 778, 869, 929, 1107, 1270, 1458, 1533
Hpy8I	GTNNAC	5 cut(s)	22, 54, 734, 1240, 1744
Hpy99I	CGWCG	1 cut(s)	911
HpyAV	CCTTC	6 cut(s)	322, 590, 739, 790, 820, 1868
HpyCH4III	ACNGT	5 cut(s)	289, 401, 565, 651, 1142
HpyCH4IV	ACGT	2 cut(s)	1161, 1673
HpyF10VI	GCNNNNNNNGC	2 cut(s)	64, 1016
HpyF3I	CTNAG	8 cut(s)	180, 681, 741, 1204, 1445, 1592, 1725, 1956
HpySE526I	ACGT	2 cut(s)	1161, 1673
Hsp92II	CATG	3 cut(s)	938, 1034, 1738
HspAI	GCGC	1 cut(s)	1691
Ksp22I	TGATCA	2 cut(s)	31, 931
KspAI	GTTAAC	1 cut(s)	1240
LguI	GCTCTTC	1 cut(s)	714
LmnI	GCTCC	4 cut(s)	871, 1603, 1788, 1980
Lsp1109I	GCAGC	2 cut(s)	545, 1336
LweI	GCATC	8 cut(s)	386, 886, 1109, 1262, 1263, 1468, 1743, 1829
MabI	ACCWGGT	1 cut(s)	588
MaeI	CTAG	2 cut(s)	1145, 1608
MaeII	ACGT	2 cut(s)	1161, 1673
MaeIII	GTNAC	6 cut(s)	118, 148, 1157, 1630, 1842, 1960
MfeI	CAATTG	1 cut(s)	1618
MflI	RGATCY	5 cut(s)	492, 642, 658, 1023, 1448
MhlI	GDGCHC	2 cut(s)	24, 456
MlyI	GAGTC	3 cut(s)	670, 1756, 1805
MmeI	TCCRAC	1 cut(s)	670
MslI	CAYNNNNRTG	1 cut(s)	1739
MspCI	CTTAAG	3 cut(s)	202, 254, 668
MspI	CCGG	1 cut(s)	456
MspR9I	CCNGG	5 cut(s)	456, 457, 505, 590, 1230
MunI	CAATTG	1 cut(s)	1618
Mva1269I	GAATGC	1 cut(s)	175
MvaI	CCWGG	3 cut(s)	505, 590, 1230
MvnI	CGCG	1 cut(s)	1693
MwoI	GCNNNNNNNGC	2 cut(s)	64, 1016
NciI	CCSGG	2 cut(s)	456, 457
NlaIII	CATG	3 cut(s)	938, 1034, 1738
NlaIV	GGNNCC	4 cut(s)	494, 1605, 1625, 1790
NmeAIII	GCCGAG	1 cut(s)	964
NmuCI	GTSAC	4 cut(s)	118, 148, 1842, 1960
PaqCI	CACCTGC	2 cut(s)	5, 1855
PasI	CCCWGGG	1 cut(s)	504
PceI	AGGCCT	1 cut(s)	1261
PciSI	GCTCTTC	1 cut(s)	714
PctI	GAATGC	1 cut(s)	175
PfeI	GAWTC	6 cut(s)	80, 103, 245, 365, 1198, 1441
PflMI	CCANNNNNTGG	1 cut(s)	652
PfoI	TCCNGGA	1 cut(s)	1228
PkrI	GCNGC	2 cut(s)	560, 1326
PleI	GAGTC	3 cut(s)	670, 1756, 1805
PpsI	GAGTC	3 cut(s)	670, 1756, 1805
Ppu21I	YACGTR	1 cut(s)	1674
PsiI	TTATAA	1 cut(s)	440
Psp6I	CCWGG	3 cut(s)	503, 588, 1228
PspGI	CCWGG	3 cut(s)	503, 588, 1228
PspN4I	GGNNCC	4 cut(s)	494, 1605, 1625, 1790
PstI	CTGCAG	1 cut(s)	1054
PsuI	RGATCY	5 cut(s)	492, 642, 658, 1023, 1448
RsaI	GTAC	1 cut(s)	1676
RsaNI	GTAC	1 cut(s)	1675
RseI	CAYNNNNRTG	1 cut(s)	1739
SapI	GCTCTTC	1 cut(s)	714
SatI	GCNGC	2 cut(s)	559, 1325
SchI	GAGTC	3 cut(s)	670, 1756, 1805
ScrFI	CCNGG	5 cut(s)	456, 457, 505, 590, 1230
SduI	GDGCHC	2 cut(s)	24, 456
SexAI	ACCWGGT	1 cut(s)	588
SfaNI	GCATC	8 cut(s)	386, 886, 1109, 1262, 1263, 1468, 1743, 1829
SfcI	CTRYAG	2 cut(s)	425, 1050
SmaI	CCCGGG	1 cut(s)	457
SmiMI	CAYNNNNRTG	1 cut(s)	1739
SmlI	CTYRAG	6 cut(s)	202, 223, 254, 668, 1583, 1909
SmoI	CTYRAG	6 cut(s)	202, 223, 254, 668, 1583, 1909
SnaBI	TACGTA	1 cut(s)	1674
SseBI	AGGCCT	1 cut(s)	1261
SsiI	CCGC	1 cut(s)	1835
SspI	AATATT	1 cut(s)	574
SspMI	CTAG	2 cut(s)	1145, 1608
StuI	AGGCCT	1 cut(s)	1261
StyD4I	CCNGG	5 cut(s)	454, 455, 503, 588, 1228
StyI	CCWWGG	3 cut(s)	546, 1607, 1635
TaaI	ACNGT	5 cut(s)	289, 401, 565, 651, 1142
TaiI	ACGT	2 cut(s)	1164, 1676
TaqI	TCGA	5 cut(s)	5, 1176, 1534, 1565, 1950
TfiI	GAWTC	6 cut(s)	80, 103, 245, 365, 1198, 1441
TseFI	GTSAC	4 cut(s)	118, 148, 1842, 1960
TseI	GCWGC	2 cut(s)	558, 1324
Tsp45I	GTSAC	4 cut(s)	118, 148, 1842, 1960
TspDTI	ATGAA	8 cut(s)	246, 483, 531, 779, 962, 1047, 1668, 1887
TspGWI	ACGGA	1 cut(s)	505
TspMI	CCCGGG	1 cut(s)	455
Van91I	CCANNNNNTGG	1 cut(s)	652
Vha464I	CTTAAG	3 cut(s)	202, 254, 668
VneI	GTGCAC	1 cut(s)	20
XagI	CCTNNNNNAGG	1 cut(s)	508
XapI	RAATTY	5 cut(s)	86, 268, 766, 1331, 1899
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1037
XmaI	CCCGGG	1 cut(s)	455
XmaJI	CCTAGG	1 cut(s)	1607
XspI	CTAG	2 cut(s)	1145, 1608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.