AT4G26770

May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
13482064 .. 13484943
2880 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26770.1

Sequence Viewer

Length: 1416 bp
ATGGCAATGGAGAAAGATCTCAGTCCAAATTCTCCACGGATTAGAAAGCTAAGGGATACTAGTTACCCTACTACACCAACGTCTCGAATGAATACTAATAACCAGAGAGATAACCATTATCCCAACATTCCTAATTCACCAAGGGATTACAATTATACTCCTAGCTCTCCAACAGCTCGCATTCGACACCGCAGGCGATCAAGCGAGAATTTAGCTGAGGTGAACAGAAGCAATGTAAGCAGAGTAAGCAATTTGTTACTTGGTGATAAGAACAAGTACAGATCAATGTGGATAAGGACATGCTCATCTCTCTGGATGCTCGGTGGAGTTGTGTTTATAATCTACATGGGTCATCTCTACATTTGGGCTATGGTTGTGGTTATACAGATATTCATGGCCAAAGAGCTCTTCTTTCTTCGCAGAAGAGCTCATGAAGAACGTCGCTTACCCGGTTTCTGGCTCTTGAATTGGCACTTCTTCTTCACGGCTATGTTGTTTGTCTATGGACGCATCATTCAACAGCAGCTAGTCAACACGGTTTCTTCAGATAGATTCATATACAAGCTTGTGAGTGGTCTTATCAAGTACCAGATGGTTATTTGCTACTTCTTGTACATCGCAGGTCTCATATGGTTTATCCTTACATTGAAGAATAAGATGTATAAGTATCAGTTTGGGCAATACGCTTGGACACATATGATCCTTATCGTTGTCTTTACTCAATCTTCTTTCACCGTCGCCAATATTTTTGAAGGGATCTTCTGGTTTCTTCTACCAGCAGCACTGATTGCTATGAACGATGTAGCAGCTTACTTCTTCGGTTTCTATTTCGGGAAAACTCCGCTCATCAAGTTGTCTCCAAAGAAAACATGGGAAGGTTTCATCGGAGCATCAGTTGCAACTATAATCTCTGCATTTATTTTTGCTAATGTCTTAGGCCAGTTCCAATGGCTTACATGTCCAAGGAAGGATTTATCAACTGGTTGGCTTCATTGTGATCCAGGCCCTCTCTTCAGGCCAGAGTATTACCCATTTCCCTCTTGGATTACTCCATTTTCTCCATGGAAAGGGATCTCGACCCTGCCTGTCCAATGGCATGCTTTTTCTCTCGGTCTATTCGCATCCATTATGGCGCCTTTTGGTGGCTTCTTCGCAAGCGGTTTCAAAAGAGCTTTCAAGATCAAGGATTTCGGAGACAGCATACCAGGACATGGAGGATTTACTGACAGAATGGATTGCCAAATGGTTATGGCGGTTTTCGCATACATCTACATCCAATCTTTCATTGTTAATCGGGACTACAGTGTCGAGATGATCCTAGACCAGATATCGAGGAGCCTGGGACACGAGGAGCAGAAAATGCTTTATGAAAAGCTCGGAGACATTCTTCAACATAAGTTGCAAGGGAGGTTTTAA

Protein Analysis

471

Amino Acids

54.92

Weight (kDa)

9.77

Isoelectric Point (pI)

49.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_transf_1 PF01148 98 - 428 1.4e-78 Cytidylyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 338
AasI GACNNNNNNGTC 1 cut(s) 1304
Acc36I ACCTGC 1 cut(s) 611
AccB1I GGYRCC 1 cut(s) 1132
AccB7I CCANNNNNTGG 1 cut(s) 1211
AccBSI CCGCTC 1 cut(s) 844
AciI CCGC 4 cut(s) 190, 842, 1158, 1253
AclWI GGATC 5 cut(s) 694, 764, 992, 1079, 1309
AcoI YGGCCR 1 cut(s) 396
AcsI RAATTY 2 cut(s) 28, 208
AcuI CTGAAG 2 cut(s) 528, 997
AcyI GRCGYC 1 cut(s) 1133
AfaI GTAC 3 cut(s) 278, 587, 614
AfiI CCNNNNNNNGG 4 cut(s) 456, 1067, 1142, 1211
AflIII ACRYGT 1 cut(s) 956
AgsI TTSAA 7 cut(s) 466, 518, 649, 752, 1165, 1177, 1391
AhlI ACTAGT 1 cut(s) 59
AjnI CCWGG 3 cut(s) 1000, 1204, 1338
AjuI GAANNNNNNNTTGG 2 cut(s) 392, 424
Alw21I GWGCWC 2 cut(s) 408, 430
Alw26I GTCTC 5 cut(s) 87, 629, 861, 1188, 1374
AlwI GGATC 5 cut(s) 694, 764, 992, 1079, 1309
AoxI GGCC 4 cut(s) 396, 937, 1003, 1016
ApeKI GCWGC 3 cut(s) 523, 779, 806
ApoI RAATTY 2 cut(s) 28, 208
AspLEI GCGC 1 cut(s) 1135
AspS9I GGNCC 1 cut(s) 1004
AsuC2I CCSGG 1 cut(s) 450
AsuHPI GGTGA 4 cut(s) 129, 232, 275, 724
BalI TGGCCA 1 cut(s) 398
BanI GGYRCC 1 cut(s) 1132
BanII GRGCYC 2 cut(s) 408, 430
BauI CACGAG 1 cut(s) 1346
Bbv12I GWGCWC 2 cut(s) 408, 430
BbvCI CCTCAGC 1 cut(s) 216
BbvI GCAGC 3 cut(s) 535, 791, 818
BccI CCATC 1 cut(s) 586
BceAI ACGGC 1 cut(s) 501
BciT130I CCWGG 3 cut(s) 1002, 1206, 1340
BciVI GTATCC 1 cut(s) 49
BcnI CCSGG 1 cut(s) 450
BcoDI GTCTC 5 cut(s) 87, 629, 861, 1188, 1374
BcuI ACTAGT 1 cut(s) 59
BfaI CTAG 4 cut(s) 60, 162, 527, 1319
BfmI CTRYAG 1 cut(s) 1300
BfoI RGCGCY 1 cut(s) 1136
BfuAI ACCTGC 1 cut(s) 611
BfuI GTATCC 1 cut(s) 49
BglII AGATCT 1 cut(s) 16
BisI GCNGC 3 cut(s) 524, 780, 807
BlsI GCNGC 3 cut(s) 525, 781, 808
Bme1390I CCNGG 4 cut(s) 450, 1002, 1206, 1340
BmgT120I GGNCC 1 cut(s) 1004
BmiI GGNNCC 2 cut(s) 1134, 1337
BmrFI CCNGG 4 cut(s) 450, 1002, 1206, 1340
BmsI GCATC 4 cut(s) 306, 519, 899, 1130
Bpu10I CCTNAGC 2 cut(s) 50, 216
BpuMI CCSGG 1 cut(s) 450
BsaBI GATNNNNATC 1 cut(s) 704
BsaHI GRCGYC 1 cut(s) 1133
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 5 cut(s) 35, 140, 962, 1061, 1339
BsaXI ACNNNNNCTCC 2 cut(s) 879, 909
Bsc4I CCNNNNNNNGG 4 cut(s) 456, 1067, 1142, 1211
Bse1I ACTGG 2 cut(s) 940, 985
Bse3DI GCAATG 2 cut(s) 12, 238
Bse8I GATNNNNATC 1 cut(s) 704
BseBI CCWGG 3 cut(s) 1002, 1206, 1340
BseDI CCNNGG 5 cut(s) 35, 140, 962, 1061, 1339
BseGI GGATG 3 cut(s) 321, 1121, 1272
BseJI GATNNNNATC 1 cut(s) 704
BseLI CCNNNNNNNGG 4 cut(s) 456, 1067, 1142, 1211
BseMI GCAATG 2 cut(s) 12, 238
BseMII CTCAG 2 cut(s) 34, 207
BseNI ACTGG 2 cut(s) 940, 985
BseRI GAGGAG 2 cut(s) 1348, 1364
BseXI GCAGC 3 cut(s) 535, 791, 818
BshFI GGCC 4 cut(s) 398, 939, 1005, 1018
BshNI GGYRCC 1 cut(s) 1132
BsiHKAI GWGCWC 2 cut(s) 408, 430
BsiSI CCGG 1 cut(s) 450
BslFI GGGAC 2 cut(s) 1310, 1356
BslI CCNNNNNNNGG 4 cut(s) 456, 1067, 1142, 1211
BsmAI GTCTC 5 cut(s) 87, 629, 861, 1188, 1374
BsmBI CGTCTC 1 cut(s) 87
BsmFI GGGAC 2 cut(s) 1310, 1356
BsmI GAATGC 1 cut(s) 180
BsnI GGCC 4 cut(s) 398, 939, 1005, 1018
Bso31I GGTCTC 1 cut(s) 629
Bsp1286I GDGCHC 2 cut(s) 408, 430
Bsp1407I TGTACA 1 cut(s) 612
Bsp143I GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
Bsp19I CCATGG 1 cut(s) 1061
BspACI CCGC 4 cut(s) 190, 842, 1158, 1253
BspANI GGCC 4 cut(s) 398, 939, 1005, 1018
BspCNI CTCAG 2 cut(s) 33, 208
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 2 cut(s) 1134, 1337
BspMI ACCTGC 1 cut(s) 611
BspPI GGATC 5 cut(s) 694, 764, 992, 1079, 1309
BspQI GCTCTTC 2 cut(s) 413, 418
BspT107I GGYRCC 1 cut(s) 1132
BspTNI GGTCTC 1 cut(s) 629
BsrBI CCGCTC 1 cut(s) 844
BsrDI GCAATG 2 cut(s) 12, 238
BsrGI TGTACA 1 cut(s) 612
BsrI ACTGG 2 cut(s) 940, 985
BssECI CCNNGG 5 cut(s) 35, 140, 962, 1061, 1339
BssMI GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
BssNI GRCGYC 1 cut(s) 1133
BssSI CACGAG 1 cut(s) 1346
BssT1I CCWWGG 3 cut(s) 140, 962, 1061
Bst2BI CACGAG 1 cut(s) 1346
Bst2UI CCWGG 3 cut(s) 1002, 1206, 1340
Bst4CI ACNGT 3 cut(s) 538, 736, 1304
Bst6I CTCTTC 3 cut(s) 413, 418, 1016
BstACI GRCGYC 1 cut(s) 1133
BstAPI GCANNNNNTGC 3 cut(s) 788, 896, 1360
BstAUI TGTACA 1 cut(s) 612
BstC8I GCNNGC 4 cut(s) 178, 194, 1098, 1156
BstDEI CTNAG 4 cut(s) 20, 50, 216, 934
BstDSI CCRYGG 2 cut(s) 35, 1061
BstF5I GGATG 3 cut(s) 321, 1121, 1272
BstH2I RGCGCY 1 cut(s) 1136
BstHHI GCGC 1 cut(s) 1135
BstKTI GATC 9 cut(s) 19, 200, 284, 702, 759, 1000, 1074, 1182, 1317
BstMAI GTCTC 5 cut(s) 87, 629, 861, 1188, 1374
BstMBI GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
BstMWI GCNNNNNNNGC 6 cut(s) 237, 246, 788, 896, 1259, 1360
BstNI CCWGG 3 cut(s) 1002, 1206, 1340
BstNSI RCATGY 3 cut(s) 303, 960, 1100
BstSCI CCNGG 4 cut(s) 448, 1000, 1204, 1338
BstSFI CTRYAG 1 cut(s) 1300
BstV1I GCAGC 3 cut(s) 535, 791, 818
BstX2I RGATCY 3 cut(s) 16, 756, 1071
BstYI RGATCY 3 cut(s) 16, 756, 1071
BsuI GTATCC 1 cut(s) 49
BsuRI GGCC 4 cut(s) 398, 939, 1005, 1018
BtgI CCRYGG 2 cut(s) 35, 1061
BtgZI GCGATG 1 cut(s) 601
BtsCI GGATG 3 cut(s) 321, 1121, 1272
BtsIMutI CAGTG 2 cut(s) 782, 1309
BveI ACCTGC 1 cut(s) 611
Cac8I GCNNGC 4 cut(s) 178, 194, 1098, 1156
CciI TCATGA 1 cut(s) 430
CfoI GCGC 1 cut(s) 1135
Cfr13I GGNCC 1 cut(s) 1004
CseI GACGC 1 cut(s) 516
Csp6I GTAC 3 cut(s) 277, 586, 613
CviAII CATG 9 cut(s) 300, 346, 394, 431, 870, 957, 1062, 1097, 1211
CviQI GTAC 3 cut(s) 277, 586, 613
DdeI CTNAG 4 cut(s) 20, 50, 216, 934
DinI GGCGCC 1 cut(s) 1134
DpnI GATC 9 cut(s) 18, 199, 283, 701, 758, 999, 1073, 1181, 1316
DpnII GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
DrdI GACNNNNNNGTC 1 cut(s) 1304
DseDI GACNNNNNNGTC 1 cut(s) 1304
EaeI YGGCCR 1 cut(s) 396
Eam1104I CTCTTC 3 cut(s) 413, 418, 1016
EarI CTCTTC 3 cut(s) 413, 418, 1016
Ecl136II GAGCTC 2 cut(s) 406, 428
Eco130I CCWWGG 3 cut(s) 140, 962, 1061
Eco24I GRGCYC 2 cut(s) 408, 430
Eco31I GGTCTC 1 cut(s) 629
Eco32I GATATC 1 cut(s) 1329
Eco53kI GAGCTC 2 cut(s) 406, 428
Eco57I CTGAAG 2 cut(s) 528, 997
EcoICRI GAGCTC 2 cut(s) 406, 428
EcoO109I RGGNCCY 1 cut(s) 1004
EcoRII CCWGG 3 cut(s) 1000, 1204, 1338
EcoRV GATATC 1 cut(s) 1329
EcoT14I CCWWGG 3 cut(s) 140, 962, 1061
EcoT38I GRGCYC 2 cut(s) 408, 430
EgeI GGCGCC 1 cut(s) 1134
EheI GGCGCC 1 cut(s) 1134
ErhI CCWWGG 3 cut(s) 140, 962, 1061
Esp3I CGTCTC 1 cut(s) 87
FaeI CATG 9 cut(s) 303, 349, 397, 434, 873, 960, 1065, 1100, 1214
FaqI GGGAC 2 cut(s) 1310, 1356
FatI CATG 9 cut(s) 299, 345, 393, 430, 869, 956, 1061, 1096, 1210
FauNDI CATATG 2 cut(s) 629, 696
Fnu4HI GCNGC 3 cut(s) 524, 780, 807
FokI GGATG 3 cut(s) 328, 1108, 1259
FriOI GRGCYC 2 cut(s) 408, 430
Fsp4HI GCNGC 3 cut(s) 524, 780, 807
FspBI CTAG 4 cut(s) 60, 162, 527, 1319
GlaI GCGC 1 cut(s) 1134
GluI GCNGC 3 cut(s) 524, 780, 807
HaeII RGCGCY 1 cut(s) 1136
HaeIII GGCC 4 cut(s) 398, 939, 1005, 1018
HapII CCGG 1 cut(s) 450
HgaI GACGC 1 cut(s) 516
HhaI GCGC 1 cut(s) 1135
Hin1I GRCGYC 1 cut(s) 1133
Hin1II CATG 9 cut(s) 303, 349, 397, 434, 873, 960, 1065, 1100, 1214
Hin6I GCGC 1 cut(s) 1133
HinP1I GCGC 1 cut(s) 1133
HincII GTYRAC 1 cut(s) 532
HindII GTYRAC 1 cut(s) 532
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 1 cut(s) 552
HpaII CCGG 1 cut(s) 450
HphI GGTGA 4 cut(s) 129, 232, 275, 724
Hpy166II GTNNAC 2 cut(s) 223, 532
Hpy188I TCNGA 4 cut(s) 547, 887, 1193, 1379
Hpy188III TCNNGA 9 cut(s) 84, 313, 431, 463, 832, 1075, 1177, 1295, 1309
Hpy8I GTNNAC 2 cut(s) 223, 532
Hpy99I CGWCG 2 cut(s) 444, 740
HpyAV CCTTC 3 cut(s) 746, 869, 961
HpyCH4III ACNGT 3 cut(s) 538, 736, 1304
HpyCH4IV ACGT 2 cut(s) 80, 439
HpyCH4V TGCA 3 cut(s) 899, 914, 1402
HpyF10VI GCNNNNNNNGC 6 cut(s) 237, 246, 788, 896, 1259, 1360
HpyF3I CTNAG 4 cut(s) 20, 50, 216, 934
HpySE526I ACGT 2 cut(s) 80, 439
Hsp92I GRCGYC 1 cut(s) 1133
Hsp92II CATG 9 cut(s) 303, 349, 397, 434, 873, 960, 1065, 1100, 1214
HspAI GCGC 1 cut(s) 1133
KasI GGCGCC 1 cut(s) 1132
Kzo9I GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
LguI GCTCTTC 2 cut(s) 413, 418
LmnI GCTCC 3 cut(s) 887, 1335, 1351
Lsp1109I GCAGC 3 cut(s) 535, 791, 818
LweI GCATC 4 cut(s) 306, 519, 899, 1130
MaeI CTAG 4 cut(s) 60, 162, 527, 1319
MaeII ACGT 2 cut(s) 80, 439
MaeIII GTNAC 2 cut(s) 62, 255
MalI GATC 9 cut(s) 18, 199, 283, 701, 758, 999, 1073, 1181, 1316
MbiI CCGCTC 1 cut(s) 844
MboI GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
MflI RGATCY 3 cut(s) 16, 756, 1071
MhlI GDGCHC 2 cut(s) 408, 430
MlsI TGGCCA 1 cut(s) 398
MluCI AATT 6 cut(s) 28, 133, 151, 208, 250, 466
MluNI TGGCCA 1 cut(s) 398
Mly113I GGCGCC 1 cut(s) 1133
MmeI TCCRAC 1 cut(s) 194
MnlI CCTC 7 cut(s) 211, 1017, 1048, 1208, 1326, 1342, 1401
Mox20I TGGCCA 1 cut(s) 398
MscI TGGCCA 1 cut(s) 398
MseI TTAA 2 cut(s) 1290, 1414
MslI CAYNNNNRTG 1 cut(s) 488
Msp20I TGGCCA 1 cut(s) 398
MspI CCGG 1 cut(s) 450
MspR9I CCNGG 4 cut(s) 450, 1002, 1206, 1340
Mva1269I GAATGC 1 cut(s) 180
MvaI CCWGG 3 cut(s) 1002, 1206, 1340
MwoI GCNNNNNNNGC 6 cut(s) 237, 246, 788, 896, 1259, 1360
NarI GGCGCC 1 cut(s) 1133
NciI CCSGG 1 cut(s) 450
NcoI CCATGG 1 cut(s) 1061
NdeI CATATG 2 cut(s) 629, 696
NdeII GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
NlaIII CATG 9 cut(s) 303, 349, 397, 434, 873, 960, 1065, 1100, 1214
NlaIV GGNNCC 2 cut(s) 1134, 1337
NspI RCATGY 3 cut(s) 303, 960, 1100
PaeI GCATGC 1 cut(s) 1100
PagI TCATGA 1 cut(s) 430
PciI ACATGT 1 cut(s) 956
PciSI GCTCTTC 2 cut(s) 413, 418
PctI GAATGC 1 cut(s) 180
PfeI GAWTC 1 cut(s) 552
PflMI CCANNNNNTGG 1 cut(s) 1211
PkrI GCNGC 3 cut(s) 525, 781, 808
PluTI GGCGCC 1 cut(s) 1136
PscI ACATGT 1 cut(s) 956
PsiI TTATAA 1 cut(s) 338
Psp124BI GAGCTC 2 cut(s) 408, 430
Psp6I CCWGG 3 cut(s) 1000, 1204, 1338
PspGI CCWGG 3 cut(s) 1000, 1204, 1338
PspN4I GGNNCC 2 cut(s) 1134, 1337
PspPI GGNCC 1 cut(s) 1004
PsrI GAACNNNNNNTAC 2 cut(s) 429, 461
PsuI RGATCY 3 cut(s) 16, 756, 1071
RsaI GTAC 3 cut(s) 278, 587, 614
RsaNI GTAC 3 cut(s) 277, 586, 613
RseI CAYNNNNRTG 1 cut(s) 488
SacI GAGCTC 2 cut(s) 408, 430
SapI GCTCTTC 2 cut(s) 413, 418
SaqAI TTAA 2 cut(s) 1290, 1414
SatI GCNGC 3 cut(s) 524, 780, 807
Sau3AI GATC 9 cut(s) 16, 197, 281, 699, 756, 997, 1071, 1179, 1314
Sau96I GGNCC 1 cut(s) 1004
ScrFI CCNGG 4 cut(s) 450, 1002, 1206, 1340
SduI GDGCHC 2 cut(s) 408, 430
SfaNI GCATC 4 cut(s) 306, 519, 899, 1130
SfcI CTRYAG 1 cut(s) 1300
SfoI GGCGCC 1 cut(s) 1134
SmiMI CAYNNNNRTG 1 cut(s) 488
SpeI ACTAGT 1 cut(s) 59
SphI GCATGC 1 cut(s) 1100
Sse9I AATT 6 cut(s) 28, 133, 151, 208, 250, 466
SsiI CCGC 4 cut(s) 190, 842, 1158, 1253
SspDI GGCGCC 1 cut(s) 1132
SspI AATATT 1 cut(s) 745
SspMI CTAG 4 cut(s) 60, 162, 527, 1319
SstI GAGCTC 2 cut(s) 408, 430
StyD4I CCNGG 4 cut(s) 448, 1000, 1204, 1338
StyI CCWWGG 3 cut(s) 140, 962, 1061
TaaI ACNGT 3 cut(s) 538, 736, 1304
TaiI ACGT 2 cut(s) 83, 442
TaqI TCGA 5 cut(s) 85, 184, 1076, 1308, 1331
TaqII GACCGA 1 cut(s) 1100
TasI AATT 6 cut(s) 28, 133, 151, 208, 250, 466
TatI WGTACW 2 cut(s) 276, 612
TfiI GAWTC 1 cut(s) 552
Tru1I TTAA 2 cut(s) 1290, 1414
Tru9I TTAA 2 cut(s) 1290, 1414
TscAI CASTG 2 cut(s) 789, 1309
TseI GCWGC 3 cut(s) 523, 779, 806
TspDTI ATGAA 9 cut(s) 104, 382, 447, 544, 809, 871, 980, 1273, 1383
TspGWI ACGGA 1 cut(s) 52
TspRI CASTG 2 cut(s) 789, 1309
Van91I CCANNNNNTGG 1 cut(s) 1211
XapI RAATTY 2 cut(s) 28, 208
XceI RCATGY 3 cut(s) 303, 960, 1100
XcmI CCANNNNNNNNNTGG 3 cut(s) 867, 1038, 1059
XspI CTAG 4 cut(s) 60, 162, 527, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.