pycom05g32310

May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
31754996 .. 31758835
3840 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g32310.9

Sequence Viewer

Length: 1278 bp
ATGCCAGGAGACAATAGTGTTGGCAGCCCACCAACCCCAAGGTCCCCAACTGCTCGACTTCGGCATCGTAGACGCTCAGCTGAGGCTCTTCCTGATGTTAGTAAAGCAAATGGAGGTGATTTACTGGTTAATGACCGTAATAAATACAGGTCAATGTTGGTACGTGCATACTCTTCTGTTTGGATGATTGGAGGTTTTGCATTGATTATATATCTGGGTCATCTCTGCATCACTGCCATGGTGGTGGTTATCCAAATCTTTATGGCAAAGGAGCTGTTTAATCTACTCAGGAAAGCTCATGAAGATAAGCACCTACCGGGATTCAGGATTCTAAATTGGCACTTTTTCTTCACTGCGATGCTGTTTGTTTACGGTCGCATACTCAGTCAACGGCTTGTCAACACTGTAACTTCAGATAAAGTTTTATATAAGCTTGTCAGCAGTCTTATCAAGTATCATATGGTTGTCTGTTATTTCTTGTACATCGCAGGATTTATGTGGTTCATTCTTACACTAAAGAAGAAGATGTACAAGTATCAGTTTGGCCAGTATGCGTGGACGCACATGATTCTAATTACTGTGTTTACCCAGTCCTCTTTCTTCGTAGCAAACATCTTTGAAGGAATTTTCTGGTTTCTTCTTCCAGCTTCACTTATTGTAATCAATGACATTGCTGCTTATATCTGTGGTTTCTTTTTTGGAAAAACCCCTTTGATCAAGATATCACCAAAGAAAACTTGGGAGGGATTCATTGGAGCGTCAGTTATAACTATCATATCAGCATTTTTGCTTGCAAATATCATGGGTCGTTTCCAGTGGCTAACGTGTCCAAGAGGGGATTTATCGACTGGTTGGCTTGATTGTGATCCTGGCCCATTGTTTAAGCCAGAGTATTATACTTTTCCAGAATGGCTCCCACACTGGTTTCCTTGGAAAGGGATTTCAATTTTGCCAGTTCAATGGCATGCGTTATGTCTTGGTTTGTTTTCATCGATAATAGCTCCATTTGGAGGCTTCTTTGCAAGTGGCTTTAAAAGGGCTTTTAAAGTCAAGGATTTTGGTGATAGTATCCCGGGACATGGTGGAATCACAGACAGAATGGATTGCCAGATGGTGATGGCGATCTTTGCTTATATCTATCACCAGTCTTTCATTGTCCCTCAGAGCCTCTCAGTTGATATGATCATAGACCAGATTTTGATGAACCTTACGCTCGAGCAGCAGCAAATTCTATTTGAGAAGCTTAAACAAGTCTTGCAGGATAGGCTGGTCGGATAA

Protein Analysis

426

Amino Acids

48.72

Weight (kDa)

9.46

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 767
AccI GTMKAC 1 cut(s) 70
AclWI GGATC 1 cut(s) 860
AcoI YGGCCR 1 cut(s) 544
AcsI RAATTY 2 cut(s) 624, 1227
AcuI CTGAAG 1 cut(s) 396
AfaI GTAC 3 cut(s) 162, 482, 530
AfiI CCNNNNNNNGG 3 cut(s) 935, 1010, 1079
AflIII ACRYGT 1 cut(s) 824
AgsI TTSAA 3 cut(s) 620, 945, 959
AjnI CCWGG 2 cut(s) 4, 868
AluBI AGCT 7 cut(s) 80, 274, 296, 433, 647, 1001, 1243
AluI AGCT 7 cut(s) 80, 274, 296, 433, 647, 1001, 1243
Alw26I GTCTC 1 cut(s) 3
AlwI GGATC 1 cut(s) 860
Ama87I CYCGRG 2 cut(s) 1072, 1214
AoxI GGCC 2 cut(s) 544, 871
ApeKI GCWGC 4 cut(s) 24, 674, 1219, 1222
ApoI RAATTY 2 cut(s) 624, 1227
AspS9I GGNCC 2 cut(s) 42, 872
AsuC2I CCSGG 3 cut(s) 318, 1073, 1074
AsuHPI GGTGA 5 cut(s) 128, 717, 1073, 1126, 1133
AvaI CYCGRG 2 cut(s) 1072, 1214
AvaII GGWCC 1 cut(s) 42
BalI TGGCCA 1 cut(s) 546
BarI GAAGNNNNNNTAC 2 cut(s) 512, 544
BbvCI CCTCAGC 1 cut(s) 81
BbvI GCAGC 4 cut(s) 36, 661, 1231, 1234
BccI CCATC 2 cut(s) 1105, 1111
BceAI ACGGC 1 cut(s) 407
BciT130I CCWGG 2 cut(s) 6, 870
BciVI GTATCC 1 cut(s) 1079
BclI TGATCA 2 cut(s) 714, 1182
BcnI CCSGG 3 cut(s) 318, 1073, 1074
BcoDI GTCTC 1 cut(s) 3
BfuI GTATCC 1 cut(s) 1079
BisI GCNGC 4 cut(s) 25, 675, 1220, 1223
BlpI GCTNAGC 1 cut(s) 76
BlsI GCNGC 4 cut(s) 26, 676, 1221, 1224
Bme1390I CCNGG 5 cut(s) 6, 318, 870, 1073, 1074
Bme18I GGWCC 1 cut(s) 42
BmeT110I CYCGRG 2 cut(s) 1072, 1214
BmgT120I GGNCC 2 cut(s) 42, 872
BmiI GGNNCC 2 cut(s) 44, 914
BmrFI CCNGG 5 cut(s) 6, 318, 870, 1073, 1074
BmrI ACTGGG 1 cut(s) 583
BmsI GCATC 3 cut(s) 73, 237, 348
BmuI ACTGGG 1 cut(s) 583
Bpu10I CCTNAGC 1 cut(s) 81
Bpu1102I GCTNAGC 1 cut(s) 76
BpuMI CCSGG 3 cut(s) 318, 1073, 1074
Bsa29I ATCGAT 1 cut(s) 992
BsaAI YACGTR 1 cut(s) 164
BsaBI GATNNNNATC 2 cut(s) 864, 1121
BsaJI CCNNGG 4 cut(s) 38, 237, 929, 1072
BsaXI ACNNNNNCTCC 2 cut(s) 747, 777
Bsc4I CCNNNNNNNGG 3 cut(s) 935, 1010, 1079
Bse1I ACTGG 8 cut(s) 129, 547, 589, 814, 853, 926, 953, 1144
Bse3DI GCAATG 1 cut(s) 669
Bse8I GATNNNNATC 2 cut(s) 864, 1121
BseBI CCWGG 2 cut(s) 6, 870
BseCI ATCGAT 1 cut(s) 992
BseDI CCNNGG 4 cut(s) 38, 237, 929, 1072
BseGI GGATG 1 cut(s) 189
BseJI GATNNNNATC 2 cut(s) 864, 1121
BseLI CCNNNNNNNGG 3 cut(s) 935, 1010, 1079
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 6 cut(s) 72, 90, 301, 397, 1175, 1185
BseNI ACTGG 8 cut(s) 129, 547, 589, 814, 853, 926, 953, 1144
BseXI GCAGC 4 cut(s) 36, 661, 1231, 1234
Bsh1285I CGRYCG 1 cut(s) 376
BshFI GGCC 2 cut(s) 546, 873
BshVI ATCGAT 1 cut(s) 992
BsiEI CGRYCG 1 cut(s) 376
BsiHKCI CYCGRG 2 cut(s) 1072, 1214
BsiSI CCGG 2 cut(s) 317, 1073
BslFI GGGAC 3 cut(s) 28, 1089, 1142
BslI CCNNNNNNNGG 3 cut(s) 935, 1010, 1079
BsmAI GTCTC 1 cut(s) 3
BsmFI GGGAC 3 cut(s) 28, 1089, 1142
BsnI GGCC 2 cut(s) 546, 873
BsoBI CYCGRG 2 cut(s) 1072, 1214
Bsp1407I TGTACA 2 cut(s) 480, 528
Bsp143I GATC 4 cut(s) 714, 865, 1122, 1182
Bsp1720I GCTNAGC 1 cut(s) 76
Bsp19I CCATGG 1 cut(s) 237
BspANI GGCC 2 cut(s) 546, 873
BspCNI CTCAG 6 cut(s) 73, 89, 300, 396, 1174, 1184
BspDI ATCGAT 1 cut(s) 992
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 2 cut(s) 44, 914
BspPI GGATC 1 cut(s) 860
BspQI GCTCTTC 1 cut(s) 93
BsrDI GCAATG 1 cut(s) 669
BsrGI TGTACA 2 cut(s) 480, 528
BsrI ACTGG 8 cut(s) 129, 547, 589, 814, 853, 926, 953, 1144
BssECI CCNNGG 4 cut(s) 38, 237, 929, 1072
BssMI GATC 4 cut(s) 714, 865, 1122, 1182
BssT1I CCWWGG 3 cut(s) 38, 237, 929
Bst2UI CCWGG 2 cut(s) 6, 870
Bst4CI ACNGT 4 cut(s) 137, 374, 406, 580
Bst6I CTCTTC 2 cut(s) 93, 178
BstAUI TGTACA 2 cut(s) 480, 528
BstBAI YACGTR 1 cut(s) 164
BstC8I GCNNGC 2 cut(s) 792, 966
BstDEI CTNAG 6 cut(s) 76, 81, 287, 383, 1161, 1171
BstDSI CCRYGG 1 cut(s) 237
BstENI CCTNNNNNAGG 1 cut(s) 933
BstF5I GGATG 1 cut(s) 189
BstKTI GATC 4 cut(s) 717, 868, 1125, 1185
BstMAI GTCTC 1 cut(s) 3
BstMBI GATC 4 cut(s) 714, 865, 1122, 1182
BstMCI CGRYCG 1 cut(s) 376
BstMWI GCNNNNNNNGC 3 cut(s) 1127, 1219, 1264
BstNI CCWGG 2 cut(s) 6, 870
BstNSI RCATGY 1 cut(s) 968
BstSCI CCNGG 5 cut(s) 4, 316, 868, 1071, 1072
BstV1I GCAGC 4 cut(s) 36, 661, 1231, 1234
BstXI CCANNNNNNTGG 2 cut(s) 244, 960
Bsu15I ATCGAT 1 cut(s) 992
BsuI GTATCC 1 cut(s) 1079
BsuRI GGCC 2 cut(s) 546, 873
BsuTUI ATCGAT 1 cut(s) 992
BtgI CCRYGG 1 cut(s) 237
BtgZI GCGATG 2 cut(s) 371, 469
BtsCI GGATG 1 cut(s) 189
BtsI GCAGTG 2 cut(s) 231, 351
BtsIMutI CAGTG 5 cut(s) 231, 351, 402, 821, 919
Cac8I GCNNGC 2 cut(s) 792, 966
CciI TCATGA 1 cut(s) 298
Cfr13I GGNCC 2 cut(s) 42, 872
Cfr9I CCCGGG 1 cut(s) 1072
ClaI ATCGAT 1 cut(s) 992
CseI GACGC 3 cut(s) 81, 568, 747
Csp6I GTAC 3 cut(s) 161, 481, 529
CviAII CATG 6 cut(s) 238, 299, 565, 802, 965, 1079
CviQI GTAC 3 cut(s) 161, 481, 529
DdeI CTNAG 6 cut(s) 76, 81, 287, 383, 1161, 1171
DpnI GATC 4 cut(s) 716, 867, 1124, 1184
DpnII GATC 4 cut(s) 714, 865, 1122, 1182
DraI TTTAAA 2 cut(s) 1033, 1045
EaeI YGGCCR 1 cut(s) 544
Eam1104I CTCTTC 2 cut(s) 93, 178
EarI CTCTTC 2 cut(s) 93, 178
Eco130I CCWWGG 3 cut(s) 38, 237, 929
Eco32I GATATC 1 cut(s) 723
Eco47I GGWCC 1 cut(s) 42
Eco57I CTGAAG 1 cut(s) 396
Eco88I CYCGRG 2 cut(s) 1072, 1214
EcoNI CCTNNNNNAGG 1 cut(s) 933
EcoO109I RGGNCCY 1 cut(s) 42
EcoRII CCWGG 2 cut(s) 4, 868
EcoRV GATATC 1 cut(s) 723
EcoT14I CCWWGG 3 cut(s) 38, 237, 929
ErhI CCWWGG 3 cut(s) 38, 237, 929
FaeI CATG 6 cut(s) 241, 302, 568, 805, 968, 1082
FaqI GGGAC 3 cut(s) 28, 1089, 1142
FatI CATG 6 cut(s) 237, 298, 564, 801, 964, 1078
FauNDI CATATG 1 cut(s) 459
FbaI TGATCA 2 cut(s) 714, 1182
FblI GTMKAC 1 cut(s) 70
Fnu4HI GCNGC 4 cut(s) 25, 675, 1220, 1223
FokI GGATG 1 cut(s) 196
Fsp4HI GCNGC 4 cut(s) 25, 675, 1220, 1223
GluI GCNGC 4 cut(s) 25, 675, 1220, 1223
HaeIII GGCC 2 cut(s) 546, 873
HapII CCGG 2 cut(s) 317, 1073
HgaI GACGC 3 cut(s) 81, 568, 747
Hin1II CATG 6 cut(s) 241, 302, 568, 805, 968, 1082
HincII GTYRAC 2 cut(s) 389, 400
HindII GTYRAC 2 cut(s) 389, 400
HindIII AAGCTT 2 cut(s) 431, 1241
HinfI GANTC 5 cut(s) 321, 328, 568, 747, 1086
HpaII CCGG 2 cut(s) 317, 1073
HphI GGTGA 5 cut(s) 128, 717, 1073, 1126, 1133
Hpy166II GTNNAC 6 cut(s) 71, 370, 389, 400, 558, 585
Hpy188I TCNGA 3 cut(s) 415, 1164, 1274
Hpy188III TCNNGA 6 cut(s) 92, 289, 299, 325, 718, 905
Hpy8I GTNNAC 6 cut(s) 71, 370, 389, 400, 558, 585
HpyAV CCTTC 1 cut(s) 614
HpyCH4III ACNGT 4 cut(s) 137, 374, 406, 580
HpyCH4IV ACGT 2 cut(s) 163, 824
HpyCH4V TGCA 6 cut(s) 167, 200, 228, 794, 1022, 1258
HpyF10VI GCNNNNNNNGC 3 cut(s) 1127, 1219, 1264
HpyF3I CTNAG 6 cut(s) 76, 81, 287, 383, 1161, 1171
HpySE526I ACGT 2 cut(s) 163, 824
Hsp92II CATG 6 cut(s) 241, 302, 568, 805, 968, 1082
Ksp22I TGATCA 2 cut(s) 714, 1182
Kzo9I GATC 4 cut(s) 714, 865, 1122, 1182
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 4 cut(s) 271, 755, 918, 1006
Lsp1109I GCAGC 4 cut(s) 36, 661, 1231, 1234
LweI GCATC 3 cut(s) 73, 237, 348
MaeII ACGT 2 cut(s) 163, 824
MaeIII GTNAC 1 cut(s) 406
MalI GATC 4 cut(s) 716, 867, 1124, 1184
MboI GATC 4 cut(s) 714, 865, 1122, 1182
MboII GAAGA 9 cut(s) 80, 165, 314, 340, 532, 535, 592, 629, 632
MlsI TGGCCA 1 cut(s) 546
MluCI AATT 5 cut(s) 334, 573, 624, 945, 1227
MluNI TGGCCA 1 cut(s) 546
MmeI TCCRAC 1 cut(s) 1252
MnlI CCTC 9 cut(s) 76, 107, 185, 604, 736, 827, 1004, 1170, 1178
Mox20I TGGCCA 1 cut(s) 546
MscI TGGCCA 1 cut(s) 546
MseI TTAA 6 cut(s) 129, 279, 882, 1032, 1044, 1245
MslI CAYNNNNRTG 3 cut(s) 236, 242, 356
Msp20I TGGCCA 1 cut(s) 546
MspA1I CMGCKG 1 cut(s) 80
MspI CCGG 2 cut(s) 317, 1073
MspR9I CCNGG 5 cut(s) 6, 318, 870, 1073, 1074
MvaI CCWGG 2 cut(s) 6, 870
MwoI GCNNNNNNNGC 3 cut(s) 1127, 1219, 1264
NciI CCSGG 3 cut(s) 318, 1073, 1074
NcoI CCATGG 1 cut(s) 237
NdeI CATATG 1 cut(s) 459
NdeII GATC 4 cut(s) 714, 865, 1122, 1182
NlaIII CATG 6 cut(s) 241, 302, 568, 805, 968, 1082
NlaIV GGNNCC 2 cut(s) 44, 914
NspI RCATGY 1 cut(s) 968
PaeI GCATGC 1 cut(s) 968
PaeR7I CTCGAG 1 cut(s) 1214
PagI TCATGA 1 cut(s) 298
PciSI GCTCTTC 1 cut(s) 93
PfeI GAWTC 5 cut(s) 321, 328, 568, 747, 1086
PkrI GCNGC 4 cut(s) 26, 676, 1221, 1224
Ppu21I YACGTR 1 cut(s) 164
PpuMI RGGWCCY 1 cut(s) 42
PsiI TTATAA 1 cut(s) 767
Psp5II RGGWCCY 1 cut(s) 42
Psp6I CCWGG 2 cut(s) 4, 868
PspGI CCWGG 2 cut(s) 4, 868
PspN4I GGNNCC 2 cut(s) 44, 914
PspPI GGNCC 2 cut(s) 42, 872
PspPPI RGGWCCY 1 cut(s) 42
PspXI VCTCGAGB 1 cut(s) 1214
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 3 cut(s) 162, 482, 530
RsaNI GTAC 3 cut(s) 161, 481, 529
RseI CAYNNNNRTG 3 cut(s) 236, 242, 356
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 6 cut(s) 129, 279, 882, 1032, 1044, 1245
SatI GCNGC 4 cut(s) 25, 675, 1220, 1223
Sau3AI GATC 4 cut(s) 714, 865, 1122, 1182
Sau96I GGNCC 2 cut(s) 42, 872
ScrFI CCNGG 5 cut(s) 6, 318, 870, 1073, 1074
SfaNI GCATC 3 cut(s) 73, 237, 348
Sfr274I CTCGAG 1 cut(s) 1214
SinI GGWCC 1 cut(s) 42
SlaI CTCGAG 1 cut(s) 1214
SmaI CCCGGG 1 cut(s) 1074
SmiMI CAYNNNNRTG 3 cut(s) 236, 242, 356
SmlI CTYRAG 1 cut(s) 1214
SmoI CTYRAG 1 cut(s) 1214
SphI GCATGC 1 cut(s) 968
Sse9I AATT 5 cut(s) 334, 573, 624, 945, 1227
StyD4I CCNGG 5 cut(s) 4, 316, 868, 1071, 1072
StyI CCWWGG 3 cut(s) 38, 237, 929
TaaI ACNGT 4 cut(s) 137, 374, 406, 580
TaiI ACGT 2 cut(s) 166, 827
TaqI TCGA 4 cut(s) 55, 845, 992, 1215
TasI AATT 5 cut(s) 334, 573, 624, 945, 1227
TatI WGTACW 2 cut(s) 480, 528
TfiI GAWTC 5 cut(s) 321, 328, 568, 747, 1086
Tru1I TTAA 6 cut(s) 129, 279, 882, 1032, 1044, 1245
Tru9I TTAA 6 cut(s) 129, 279, 882, 1032, 1044, 1245
TscAI CASTG 5 cut(s) 238, 358, 409, 821, 926
TseI GCWGC 4 cut(s) 24, 674, 1219, 1222
TspDTI ATGAA 6 cut(s) 315, 493, 739, 978, 1141, 1217
TspMI CCCGGG 1 cut(s) 1072
TspRI CASTG 5 cut(s) 238, 358, 409, 821, 926
VpaK11BI GGWCC 1 cut(s) 42
XagI CCTNNNNNAGG 1 cut(s) 933
XapI RAATTY 2 cut(s) 624, 1227
XceI RCATGY 1 cut(s) 968
XcmI CCANNNNNNNNNTGG 1 cut(s) 735
XhoI CTCGAG 1 cut(s) 1214
XmaI CCCGGG 1 cut(s) 1072
XmiI GTMKAC 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.