Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003195

Physical Location & Seq

Genomic Coordinates Forward (+)

41526798 .. 41532666

Gene Structure 5869 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00030870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGCAAAGAGATAATACTGCTGGAAGCCCATCAACCCCAAGGTCCCCGCGACTGCGGCACCGTAGACGCTCAGCTGAGCAACTTATCCCAGATGCTAGTAACACAAATGGAGGTCATTTACTTGTTGATGACAATAATAAATACAAGACGATGTGGATTCGGGCATACTCTACTGTTTGGATGATTGGAGGATTTGCATTAATTATATATCTGGGCCATCTGGCTATTACTGCCATGGTGGTTGTTATCCAAATCTTCATGGCAAAGGAGCTCTTTAATCTCTTAAGGAGAGCTCATGAAGATAGGCGTCTCCCAGGATTCAGGCTGTTAAATTGGCACTTCTTCTTCACTGCGATGCTGTTTGTTTACGGTCGAATACTCAGTCAACGGCTTGTTAACACTGTAACTTCAGATAAATTTTTACATAAGGTTGTAAGCAGTCTTATCCAGTATCATATGGTCGCCTGCTATTTCTTGTACATCGCAGGTTTTATGTGGTTCATTCTTACATTGAAGAAGAAGATGTACAAGTATCAATTTGGCCAGTATGCATGGACACACATGATCCTAATAATTGTGTTTACACAGTCCTCTTTTACTGTAGCCAACATCTTTGAAGGAATTTTCTGGTTTCTTCTTCCAGCAACACTCATAGTCATCAATGATATTGCTGCTTACATTTGCGGCTTCTTTTTTGGAAGAACCCCTTTGATTAAGATATCTCCAAAGAAAACTTGGGAGGGTTTCATTGGAGCTTCTATTACAACAATATCTAGAGTGTTCCTGGGGCGCAGAGACGCTTTGTATAAGTTCTATGAGAATATGTTTGTAATGCTTTTTGAAATCTGTGATTGGAGATCCCTCAACATCGATTTATCTACTGGTTGGCTTCACTGTGATCCTGGTCCATTGTTTACACCAGAGTATCATACCTTACCAGGATGGCTCCCGGAATCGTTTCCTTGGAAGGGGATCTCAATTATGCCAGTTCAATGGCATGCTCTATGTCTTGGTTTGTTTTCATCAATTATAGCACCTTTTGGAGGCTTCTTTGCAAGTGGTTTTAAAAGAGCTTTCAAAGTCAAGGATTTTGGTGACAGTATCCCTGGCCACGGTGGAATCACAGACAGAATGGATTGTCAGATGGTAATGGCTGTTTTCGCTTACATCTATCATCAGTCATTTGTTGTGCCTCAACAACTCTCGGTTGAAATTTTATTGGACCAGATTTTGACAAACCTTACTCTCGAGCAGCAGCAAGCTCTGTATGAGAAGCTTAAACAAGTCTTGCAGGACAGGCTACTCGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004605 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006139 GO:0006220 GO:0006221 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009165 GO:0009987 GO:0012505 GO:0016020 GO:0016024 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019637 GO:0031984 GO:0032502 GO:0034641 GO:0034654 GO:0040007 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046341 GO:0046471 GO:0046474 GO:0046483 GO:0046486 GO:0048589 GO:0055086 GO:0070567 GO:0071704 GO:0072527 GO:0072528 GO:0080186 GO:0090407 GO:0098827 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00564 ko01100 ko01110 ko04070 map00564 map01100 map01110 map04070

Pfam Domains

Protein Families

CTP_transf_1

Protein Analysis

436

Amino Acids

50.39

Weight (kDa)

9.43

Isoelectric Point (pI)

46.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_transf_1	PF01148	53 - 395	3.7e-75	Cytidylyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62430 AT4G22340 AT4G22340 AT4G22340 AT4G26770
fragaria_vesca	FvH4_3g01060 FvH4_3g01060 FvH4_3g01060 FvH4_3g01060
malus_domestica	MD05G1357100.v1.1 MD10G1330800.v1.1
prunus_persica	Prupe.4G011700_v2.0.a1 Prupe.4G011700_v2.0.a1
pyrus_communis	pycom05g32310 pycom10g28020
rosa_chinensis	RchiOBHm_Chr5g0001601 RchiOBHm_Chr5g0050181
rosa_laevigata	RLG00000030947
rosa_multiflora	Rmu_sc0006320.1_g000005
rosa_roxburghii	Rroxscaffold_1G00030870 Rroxscaffold_1G00074710
rosa_rugosa	Rorug04G0391300 Rorug05G0259300 Rorug05G0259400 Rorug05G0259500 Rorug05G0259600 Rorug05G0259700 Rorug05G0259700
rosa_samantha	Rh5AG012800 Rh5AG331000 Rh5BG341700 Rh5CG013800 Rh5CG368200 Rh5DG013600 Rh5DG354500
rosa_wichuraiana	Rw5G001220 Rw5G031280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	476
AccB1I	GGYRCC	1 cut(s)	57
AccI	GTMKAC	1 cut(s)	64
AccII	CGCG	1 cut(s)	49
AciI	CCGC	3 cut(s)	47, 55, 684
AclWI	GGATC	4 cut(s)	559, 852, 893, 980
AcoI	YGGCCR	2 cut(s)	541, 1108
AcsI	RAATTY	3 cut(s)	416, 621, 1212
AcuI	CTGAAG	1 cut(s)	393
AcyI	GRCGYC	1 cut(s)	307
AfaI	GTAC	2 cut(s)	479, 527
AfiI	CCNNNNNNNGG	3 cut(s)	968, 1043, 1112
AflII	CTTAAG	1 cut(s)	283
AgsI	TTSAA	6 cut(s)	514, 617, 842, 992, 1078, 1211
AjnI	CCWGG	5 cut(s)	313, 783, 901, 937, 1105
AluBI	AGCT	7 cut(s)	74, 271, 293, 755, 1073, 1262, 1276
AluI	AGCT	7 cut(s)	74, 271, 293, 755, 1073, 1262, 1276
Alw21I	GWGCWC	2 cut(s)	273, 295
Alw26I	GTCTC	2 cut(s)	314, 789
AlwI	GGATC	4 cut(s)	559, 852, 893, 980
Ama87I	CYCGRG	1 cut(s)	1247
AoxI	GGCC	3 cut(s)	214, 541, 1108
ApeKI	GCWGC	3 cut(s)	671, 1252, 1255
ApoI	RAATTY	3 cut(s)	416, 621, 1212
ArsI	GACNNNNNNTTYG	2 cut(s)	367, 399
AseI	ATTAAT	1 cut(s)	200
Asp700I	GAANNNNTTC	1 cut(s)	957
AspLEI	GCGC	1 cut(s)	792
AspS9I	GGNCC	4 cut(s)	42, 214, 905, 1222
AsuC2I	CCSGG	1 cut(s)	950
AsuHPI	GGTGA	1 cut(s)	1106
AvaI	CYCGRG	1 cut(s)	1247
AvaII	GGWCC	3 cut(s)	42, 905, 1222
BaeI	ACNNNNGTAYC	2 cut(s)	908, 941
BalI	TGGCCA	2 cut(s)	543, 1110
BanI	GGYRCC	1 cut(s)	57
BanII	GRGCYC	2 cut(s)	273, 295
BarI	GAAGNNNNNNTAC	2 cut(s)	509, 541
Bbv12I	GWGCWC	2 cut(s)	273, 295
BbvI	GCAGC	3 cut(s)	658, 1264, 1267
BccI	CCATC	4 cut(s)	37, 225, 936, 1138
BceAI	ACGGC	1 cut(s)	404
BciT130I	CCWGG	5 cut(s)	315, 785, 903, 939, 1107
BciVI	GTATCC	1 cut(s)	1112
BcnI	CCSGG	1 cut(s)	950
BcoDI	GTCTC	2 cut(s)	314, 789
BfaI	CTAG	2 cut(s)	96, 774
BfmI	CTRYAG	1 cut(s)	600
BfrI	CTTAAG	1 cut(s)	283
BfuAI	ACCTGC	1 cut(s)	476
BfuI	GTATCC	1 cut(s)	1112
BisI	GCNGC	5 cut(s)	56, 672, 685, 1253, 1256
BlpI	GCTNAGC	2 cut(s)	70, 75
BlsI	GCNGC	5 cut(s)	57, 673, 686, 1254, 1257
Bme1390I	CCNGG	6 cut(s)	315, 785, 903, 939, 950, 1107
Bme18I	GGWCC	3 cut(s)	42, 905, 1222
BmeT110I	CYCGRG	1 cut(s)	1247
BmgT120I	GGNCC	4 cut(s)	42, 214, 905, 1222
BmiI	GGNNCC	3 cut(s)	44, 59, 947
BmrFI	CCNGG	6 cut(s)	315, 785, 903, 939, 950, 1107
BmsI	GCATC	2 cut(s)	82, 345
Bpu1102I	GCTNAGC	2 cut(s)	70, 75
BpuMI	CCSGG	1 cut(s)	950
Bsa29I	ATCGAT	1 cut(s)	870
BsaHI	GRCGYC	1 cut(s)	307
BsaJI	CCNNGG	7 cut(s)	38, 234, 313, 784, 962, 1105, 1111
Bsc4I	CCNNNNNNNGG	3 cut(s)	968, 1043, 1112
Bse1I	ACTGG	4 cut(s)	448, 544, 886, 986
BseBI	CCWGG	5 cut(s)	315, 785, 903, 939, 1107
BseCI	ATCGAT	1 cut(s)	870
BseDI	CCNNGG	7 cut(s)	38, 234, 313, 784, 962, 1105, 1111
BseGI	GGATG	2 cut(s)	186, 947
BseLI	CCNNNNNNNGG	3 cut(s)	968, 1043, 1112
BseMII	CTCAG	3 cut(s)	66, 84, 394
BseNI	ACTGG	4 cut(s)	448, 544, 886, 986
BseXI	GCAGC	3 cut(s)	658, 1264, 1267
Bsh1236I	CGCG	1 cut(s)	49
Bsh1285I	CGRYCG	1 cut(s)	373
BshFI	GGCC	3 cut(s)	216, 543, 1110
BshNI	GGYRCC	1 cut(s)	57
BshVI	ATCGAT	1 cut(s)	870
BsiEI	CGRYCG	1 cut(s)	373
BsiHKAI	GWGCWC	2 cut(s)	273, 295
BsiHKCI	CYCGRG	1 cut(s)	1247
BsiSI	CCGG	1 cut(s)	950
BslFI	GGGAC	1 cut(s)	28
BslI	CCNNNNNNNGG	3 cut(s)	968, 1043, 1112
BsmAI	GTCTC	2 cut(s)	314, 789
BsmBI	CGTCTC	2 cut(s)	314, 789
BsmFI	GGGAC	1 cut(s)	28
BsnI	GGCC	3 cut(s)	216, 543, 1110
BsoBI	CYCGRG	1 cut(s)	1247
Bsp1286I	GDGCHC	2 cut(s)	273, 295
Bsp1407I	TGTACA	2 cut(s)	477, 525
Bsp143I	GATC	4 cut(s)	564, 857, 898, 972
Bsp1720I	GCTNAGC	2 cut(s)	70, 75
Bsp19I	CCATGG	1 cut(s)	234
BspACI	CCGC	3 cut(s)	47, 55, 684
BspANI	GGCC	3 cut(s)	216, 543, 1110
BspCNI	CTCAG	3 cut(s)	67, 83, 393
BspDI	ATCGAT	1 cut(s)	870
BspFNI	CGCG	1 cut(s)	49
BspHI	TCATGA	1 cut(s)	295
BspLI	GGNNCC	3 cut(s)	44, 59, 947
BspMI	ACCTGC	1 cut(s)	476
BspPI	GGATC	4 cut(s)	559, 852, 893, 980
BspT107I	GGYRCC	1 cut(s)	57
BspTI	CTTAAG	1 cut(s)	283
BsrGI	TGTACA	2 cut(s)	477, 525
BsrI	ACTGG	4 cut(s)	448, 544, 886, 986
BssECI	CCNNGG	7 cut(s)	38, 234, 313, 784, 962, 1105, 1111
BssMI	GATC	4 cut(s)	564, 857, 898, 972
BssNI	GRCGYC	1 cut(s)	307
BssT1I	CCWWGG	3 cut(s)	38, 234, 962
Bst2UI	CCWGG	5 cut(s)	315, 785, 903, 939, 1107
Bst4CI	ACNGT	9 cut(s)	62, 175, 371, 403, 588, 601, 896, 1100, 1115
BstACI	GRCGYC	1 cut(s)	307
BstAFI	CTTAAG	1 cut(s)	283
BstAUI	TGTACA	2 cut(s)	477, 525
BstC8I	GCNNGC	3 cut(s)	466, 999, 1260
BstDEI	CTNAG	3 cut(s)	70, 75, 380
BstDSI	CCRYGG	2 cut(s)	234, 1111
BstENI	CCTNNNNNAGG	1 cut(s)	1041
BstF5I	GGATG	2 cut(s)	186, 947
BstFNI	CGCG	1 cut(s)	49
BstHHI	GCGC	1 cut(s)	792
BstKTI	GATC	4 cut(s)	567, 860, 901, 975
BstMAI	GTCTC	2 cut(s)	314, 789
BstMBI	GATC	4 cut(s)	564, 857, 898, 972
BstMCI	CGRYCG	1 cut(s)	373
BstMWI	GCNNNNNNNGC	4 cut(s)	55, 230, 1160, 1297
BstNI	CCWGG	5 cut(s)	315, 785, 903, 939, 1107
BstNSI	RCATGY	1 cut(s)	1001
BstSCI	CCNGG	6 cut(s)	313, 783, 901, 937, 948, 1105
BstSFI	CTRYAG	1 cut(s)	600
BstUI	CGCG	1 cut(s)	49
BstV1I	GCAGC	3 cut(s)	658, 1264, 1267
BstX2I	RGATCY	2 cut(s)	857, 972
BstXI	CCANNNNNNTGG	1 cut(s)	993
BstYI	RGATCY	2 cut(s)	857, 972
Bsu15I	ATCGAT	1 cut(s)	870
BsuI	GTATCC	1 cut(s)	1112
BsuRI	GGCC	3 cut(s)	216, 543, 1110
BsuTUI	ATCGAT	1 cut(s)	870
BtgI	CCRYGG	2 cut(s)	234, 1111
BtgZI	GCGATG	2 cut(s)	368, 466
BtsCI	GGATG	2 cut(s)	186, 947
BtsI	GCAGTG	1 cut(s)	348
BtsIMutI	CAGTG	3 cut(s)	348, 399, 892
BveI	ACCTGC	1 cut(s)	476
Cac8I	GCNNGC	3 cut(s)	466, 999, 1260
CciI	TCATGA	1 cut(s)	295
CfoI	GCGC	1 cut(s)	792
Cfr13I	GGNCC	4 cut(s)	42, 214, 905, 1222
ClaI	ATCGAT	1 cut(s)	870
CseI	GACGC	3 cut(s)	75, 296, 806
Csp6I	GTAC	2 cut(s)	478, 526
CviAII	CATG	6 cut(s)	235, 259, 296, 552, 562, 998
CviQI	GTAC	2 cut(s)	478, 526
DdeI	CTNAG	3 cut(s)	70, 75, 380
DpnI	GATC	4 cut(s)	566, 859, 900, 974
DpnII	GATC	4 cut(s)	564, 857, 898, 972
DraI	TTTAAA	1 cut(s)	1066
EaeI	YGGCCR	2 cut(s)	541, 1108
Ecl136II	GAGCTC	2 cut(s)	271, 293
Eco130I	CCWWGG	3 cut(s)	38, 234, 962
Eco24I	GRGCYC	2 cut(s)	273, 295
Eco32I	GATATC	1 cut(s)	720
Eco47I	GGWCC	3 cut(s)	42, 905, 1222
Eco53kI	GAGCTC	2 cut(s)	271, 293
Eco57I	CTGAAG	1 cut(s)	393
Eco88I	CYCGRG	1 cut(s)	1247
EcoICRI	GAGCTC	2 cut(s)	271, 293
EcoNI	CCTNNNNNAGG	1 cut(s)	1041
EcoO109I	RGGNCCY	1 cut(s)	42
EcoRII	CCWGG	5 cut(s)	313, 783, 901, 937, 1105
EcoRV	GATATC	1 cut(s)	720
EcoT14I	CCWWGG	3 cut(s)	38, 234, 962
EcoT22I	ATGCAT	1 cut(s)	553
EcoT38I	GRGCYC	2 cut(s)	273, 295
ErhI	CCWWGG	3 cut(s)	38, 234, 962
Esp3I	CGTCTC	2 cut(s)	314, 789
FaeI	CATG	6 cut(s)	238, 262, 299, 555, 565, 1001
FalI	AAGNNNNNCTT	4 cut(s)	257, 289, 691, 723
FaqI	GGGAC	1 cut(s)	28
FatI	CATG	6 cut(s)	234, 258, 295, 551, 561, 997
FauI	CCCGC	1 cut(s)	54
FauNDI	CATATG	1 cut(s)	456
FblI	GTMKAC	1 cut(s)	64
Fnu4HI	GCNGC	5 cut(s)	56, 672, 685, 1253, 1256
FokI	GGATG	2 cut(s)	193, 954
FriOI	GRGCYC	2 cut(s)	273, 295
Fsp4HI	GCNGC	5 cut(s)	56, 672, 685, 1253, 1256
FspBI	CTAG	2 cut(s)	96, 774
GlaI	GCGC	1 cut(s)	791
GluI	GCNGC	5 cut(s)	56, 672, 685, 1253, 1256
HaeIII	GGCC	3 cut(s)	216, 543, 1110
HapII	CCGG	1 cut(s)	950
HgaI	GACGC	3 cut(s)	75, 296, 806
HhaI	GCGC	1 cut(s)	792
Hin1I	GRCGYC	1 cut(s)	307
Hin1II	CATG	6 cut(s)	238, 262, 299, 555, 565, 1001
Hin6I	GCGC	1 cut(s)	790
HinP1I	GCGC	1 cut(s)	790
HincII	GTYRAC	2 cut(s)	386, 397
HindII	GTYRAC	2 cut(s)	386, 397
HindIII	AAGCTT	1 cut(s)	1274
HinfI	GANTC	4 cut(s)	157, 318, 953, 1119
HpaI	GTTAAC	1 cut(s)	397
HpaII	CCGG	1 cut(s)	950
HphI	GGTGA	1 cut(s)	1106
Hpy166II	GTNNAC	6 cut(s)	65, 367, 386, 397, 582, 915
Hpy188I	TCNGA	3 cut(s)	412, 1143, 1307
Hpy188III	TCNNGA	3 cut(s)	296, 774, 1247
Hpy8I	GTNNAC	6 cut(s)	65, 367, 386, 397, 582, 915
HpyAV	CCTTC	2 cut(s)	611, 961
HpyCH4III	ACNGT	9 cut(s)	62, 175, 371, 403, 588, 601, 896, 1100, 1115
HpyCH4V	TGCA	5 cut(s)	4, 197, 551, 1055, 1291
HpyF10VI	GCNNNNNNNGC	4 cut(s)	55, 230, 1160, 1297
HpyF3I	CTNAG	3 cut(s)	70, 75, 380
Hsp92I	GRCGYC	1 cut(s)	307
Hsp92II	CATG	6 cut(s)	238, 262, 299, 555, 565, 1001
HspAI	GCGC	1 cut(s)	790
KspAI	GTTAAC	1 cut(s)	397
Kzo9I	GATC	4 cut(s)	564, 857, 898, 972
LmnI	GCTCC	3 cut(s)	268, 752, 951
Lsp1109I	GCAGC	3 cut(s)	658, 1264, 1267
LweI	GCATC	2 cut(s)	82, 345
MaeI	CTAG	2 cut(s)	96, 774
MaeIII	GTNAC	3 cut(s)	98, 403, 1094
MalI	GATC	4 cut(s)	566, 859, 900, 974
MboI	GATC	4 cut(s)	564, 857, 898, 972
MflI	RGATCY	2 cut(s)	857, 972
MhlI	GDGCHC	2 cut(s)	273, 295
MlsI	TGGCCA	2 cut(s)	543, 1110
MluCI	AATT	9 cut(s)	201, 331, 416, 536, 573, 621, 978, 1026, 1212
MluNI	TGGCCA	2 cut(s)	543, 1110
MnlI	CCTC	7 cut(s)	104, 182, 601, 733, 872, 1037, 1203
Mox20I	TGGCCA	2 cut(s)	543, 1110
Mph1103I	ATGCAT	1 cut(s)	553
MroXI	GAANNNNTTC	1 cut(s)	957
MscI	TGGCCA	2 cut(s)	543, 1110
MseI	TTAA	8 cut(s)	200, 276, 284, 329, 396, 714, 1065, 1278
MslI	CAYNNNNRTG	1 cut(s)	353
Msp20I	TGGCCA	2 cut(s)	543, 1110
MspA1I	CMGCKG	1 cut(s)	74
MspCI	CTTAAG	1 cut(s)	283
MspI	CCGG	1 cut(s)	950
MspR9I	CCNGG	6 cut(s)	315, 785, 903, 939, 950, 1107
MvaI	CCWGG	5 cut(s)	315, 785, 903, 939, 1107
MvnI	CGCG	1 cut(s)	49
MwoI	GCNNNNNNNGC	4 cut(s)	55, 230, 1160, 1297
NciI	CCSGG	1 cut(s)	950
NcoI	CCATGG	1 cut(s)	234
NdeI	CATATG	1 cut(s)	456
NdeII	GATC	4 cut(s)	564, 857, 898, 972
NlaIII	CATG	6 cut(s)	238, 262, 299, 555, 565, 1001
NlaIV	GGNNCC	3 cut(s)	44, 59, 947
NmuCI	GTSAC	1 cut(s)	1094
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	1 cut(s)	1001
PaeI	GCATGC	1 cut(s)	1001
PaeR7I	CTCGAG	1 cut(s)	1247
PagI	TCATGA	1 cut(s)	295
PdmI	GAANNNNTTC	1 cut(s)	957
PfeI	GAWTC	4 cut(s)	157, 318, 953, 1119
PfoI	TCCNGGA	1 cut(s)	948
PkrI	GCNGC	5 cut(s)	57, 673, 686, 1254, 1257
PpuMI	RGGWCCY	1 cut(s)	42
PshBI	ATTAAT	1 cut(s)	200
Psp124BI	GAGCTC	2 cut(s)	273, 295
Psp5II	RGGWCCY	1 cut(s)	42
Psp6I	CCWGG	5 cut(s)	313, 783, 901, 937, 1105
PspGI	CCWGG	5 cut(s)	313, 783, 901, 937, 1105
PspN4I	GGNNCC	3 cut(s)	44, 59, 947
PspPI	GGNCC	4 cut(s)	42, 214, 905, 1222
PspPPI	RGGWCCY	1 cut(s)	42
PsuI	RGATCY	2 cut(s)	857, 972
PvuII	CAGCTG	1 cut(s)	74
RsaI	GTAC	2 cut(s)	479, 527
RsaNI	GTAC	2 cut(s)	478, 526
RseI	CAYNNNNRTG	1 cut(s)	353
SacI	GAGCTC	2 cut(s)	273, 295
SaqAI	TTAA	8 cut(s)	200, 276, 284, 329, 396, 714, 1065, 1278
SatI	GCNGC	5 cut(s)	56, 672, 685, 1253, 1256
Sau3AI	GATC	4 cut(s)	564, 857, 898, 972
Sau96I	GGNCC	4 cut(s)	42, 214, 905, 1222
ScrFI	CCNGG	6 cut(s)	315, 785, 903, 939, 950, 1107
SduI	GDGCHC	2 cut(s)	273, 295
SfaNI	GCATC	2 cut(s)	82, 345
SfcI	CTRYAG	1 cut(s)	600
Sfr274I	CTCGAG	1 cut(s)	1247
SinI	GGWCC	3 cut(s)	42, 905, 1222
SlaI	CTCGAG	1 cut(s)	1247
SmiMI	CAYNNNNRTG	1 cut(s)	353
SmlI	CTYRAG	2 cut(s)	283, 1247
SmoI	CTYRAG	2 cut(s)	283, 1247
SphI	GCATGC	1 cut(s)	1001
Sse9I	AATT	9 cut(s)	201, 331, 416, 536, 573, 621, 978, 1026, 1212
SsiI	CCGC	3 cut(s)	47, 55, 684
SspMI	CTAG	2 cut(s)	96, 774
SstI	GAGCTC	2 cut(s)	273, 295
StyD4I	CCNGG	6 cut(s)	313, 783, 901, 937, 948, 1105
StyI	CCWWGG	3 cut(s)	38, 234, 962
TaaI	ACNGT	9 cut(s)	62, 175, 371, 403, 588, 601, 896, 1100, 1115
TaqI	TCGA	3 cut(s)	373, 870, 1248
TasI	AATT	9 cut(s)	201, 331, 416, 536, 573, 621, 978, 1026, 1212
TatI	WGTACW	2 cut(s)	477, 525
TauI	GCSGC	2 cut(s)	58, 687
TfiI	GAWTC	4 cut(s)	157, 318, 953, 1119
Tru1I	TTAA	8 cut(s)	200, 276, 284, 329, 396, 714, 1065, 1278
Tru9I	TTAA	8 cut(s)	200, 276, 284, 329, 396, 714, 1065, 1278
TscAI	CASTG	3 cut(s)	355, 406, 899
TseFI	GTSAC	1 cut(s)	1094
TseI	GCWGC	3 cut(s)	671, 1252, 1255
Tsp45I	GTSAC	1 cut(s)	1094
TspDTI	ATGAA	5 cut(s)	247, 312, 490, 736, 1011
TspRI	CASTG	3 cut(s)	355, 406, 899
Vha464I	CTTAAG	1 cut(s)	283
VpaK11BI	GGWCC	3 cut(s)	42, 905, 1222
VspI	ATTAAT	1 cut(s)	200
XagI	CCTNNNNNAGG	1 cut(s)	1041
XapI	RAATTY	3 cut(s)	416, 621, 1212
XbaI	TCTAGA	1 cut(s)	773
XceI	RCATGY	1 cut(s)	1001
XcmI	CCANNNNNNNNNTGG	1 cut(s)	732
XhoI	CTCGAG	1 cut(s)	1247
XmiI	GTMKAC	1 cut(s)	64
XmnI	GAANNNNTTC	1 cut(s)	957
XspI	CTAG	2 cut(s)	96, 774
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.