AT4G27190

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0011026
Physical Location & Seq
Reverse (-)
13620977 .. 13624043
3067 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G27190.1

Sequence Viewer

Length: 2958 bp
ATGGAGTGTTGCGCCCCTGTCATTGGTGAGATTTTGCGTTTGATGTATGAGTCAACGTTCTCAAGAGTCGCTAATGCCATAAAGTTCAAATCAAACGTCAAAGCTCTTAATGAATCACTCGAGAGATTGACAGAGCTTAAGGGTAACATGAGTGAAGATCATGAAACTTTGCTGACCAAAGATAAACCCTTGAGACTCAAGCTAATGCGTTGGCAAAGAGAGGCGGAAGAAGTTATATCTAAAGCAAGGTTAAAACTTGAGGAACGAGTTTCATGCGGTATGTCCTTGAGACCCAGGATGAGTAGGAAACTTGTCAAGATTCTCGATGAAGTGAAAATGCTTGAGAAGGATGGAATAGAGTTTGTCGACATGCTTTCCGTGGAGTCTACACCGGAAAGAGTTGAACATGTTCCAGGGGTCTCAGTTGTTCATCAAACGATGGCGTCAAATATGTTGGCCAAAATTAGAGATGGCTTGACAAGCGAGAAAGCCCAAAAGATTGGTGTTTGGGGCATGGGAGGAGTAGGTAAAACGACATTGGTCAGGACGCTGAACAATAAGCTTCGGGAAGAGGGTGCTACTCAACCATTTGGCTTGGTGATCTTTGTAATAGTTTCCAAAGAGTTTGATCCAAGAGAAGTCCAAAAGCAGATTGCGGAGAGACTGGATATTGATACCCAAATGGAAGAAAGTGAAGAGAAGTTGGCAAGAAGGATTTATGTTGGACTGATGAAAGAGAGAAAGTTTCTTCTCATTCTTGATGACGTTTGGAAACCCATTGATTTGGATCTTTTAGGCATCCCACGAACTGAAGAGAACAAAGGTTCAAAAGTCATTCTGACTTCGAGGTTTTTAGAGGTCTGTCGCAGCATGAAGACAGATCTTGATGTTAGAGTGGATTGCTTACTTGAAGAAGACGCTTGGGAATTGTTTTGCAAAAATGCAGGGGATGTTGTGAGGTCAGACCATGTTAGGAAGATTGCAAAAGCTGTTTCACAAGAATGTGGTGGATTGCCTCTTGCTATCATCACAGTCGGAACAGCTATGCGGGGAAAGAAAAATGTCAAGCTATGGAATCATGTCTTGAGTAAGCTAAGTAAATCAGTACCTTGGATCAAGAGCATTGAAGAGAAGATCTTCCAGCCATTGAAATTGAGCTACGATTTCTTGGAAGACAAGGCAAAGTTTTGTTTTCTCCTTTGTGCTTTGTTTCCAGAAGACTACTCGATTGAAGTTACAGAGGTTGTAAGATATTGGATGGCTGAAGGATTCATGGAGGAACTCGGTTCCCAAGAGGACTCCATGAACGAGGGAATCACAACTGTGGAGAGTTTAAAGGATTATTGTTTGTTAGAAGATGGTGATCGTAGAGACACGGTGAAGATGCATGATGTTGTCCGCGATTTCGCCATATGGATCATGTCTTCCTCACAAGATGATTCCCATTCCCTTGTCATGTCTGGAACGGGTTTGCAAGATATTAGACAAGATAAGCTTGCTCCTTCTCTTCGAAGGGTTTCTTTGATGAACAATAAACTAGAAAGCCTTCCTGATCTTGTAGAAGAGTTCTGCGTAAAAACCTCAGTCTTACTGCTACAAGGCAATTTTCTTCTAAAGGAAGTACCCATTGGATTCTTGCAAGCATTTCCAACTCTTCGAATCTTGAATCTAAGTGGGACTCGCATTAAGTCATTTCCCAGTTGCTCTCTTTTGCGCCTTTTCAGTCTCCATTCTCTCTTCTTAAGAGATTGTTTTAAACTTGTGAAACTACCTTCACTAGAAACCCTTGCCAAACTTGAGCTACTTGATCTCTGTGGCACACATATCCTCGAATTTCCAAGAGGGTTGGAAGAATTAAAGAGATTCAGACACCTTGATCTTTCACGAACACTTCACCTTGAAAGCATTCCAGCTAGAGTTGTTTCGAGGTTATCAAGTTTGGAGACACTTGACATGACGTCAAGTCACTACCGCTGGAGCGTACAGGGAGAAACACAAAAAGGGCAAGCAACAGTTGAAGAGATAGGATGCCTCCAGCGTTTACAGGTTCTTTCCATCAGGCTCCATTCTTCTCCATTTCTTTTAAATAAGAGAAACACTTGGATCAAAAGATTGAAGAAATTCCAACTTGTAGTTGGGTCTCGTTACATTTTGCGTACAAGGCACGACAAGAGGAGGCTAACAATAAGTCACCTCAACGTATCACAAGTATCCATCGGGTGGCTGTTGGCTTATACAACATCTCTAGCACTAAACCATTGTCAGGGGATCGAAGCAATGATGAAGAAATTGGTAAGTGACAACAAGGGTTTCAAGAATTTGAAATCTCTGACGATTGAGAACGTTATCATCAATACGAATTCTTGGGTTGAGATGGTAAGCACTAACACTTCAAAACAATCCTCTGACATACTAGACCTTCTTCCAAATTTGGAGGAACTTCATCTGCGTCGTGTTGACTTGGAAACCTTCTCAGAGCTACAAACACATCTCGGGTTGAAACTGGAAACACTGAAGATAATCGAGATCACCATGTGTCGCAAGCTTCGAACACTACTCGACAAAAGAAATTTCTTGACTATCCCAAACCTGGAGGAGATAGAGATTAGCTACTGCGACTCTTTGCAGAATCTACACGAGGCTTTGTTATACCATCAACCTTTCGTACCAAATCTACGTGTCTTGAAACTGAGAAATCTTCCAAATCTTGTGAGTATATGCAACTGGGGAGAGGTTTGGGAATGCTTGGAACAAGTGGAAGTGATTCACTGTAATCAGCTGAATTGTTTACCCATAAGCTCTACCTGTGGAAGAATCAAGAAGATAAAAGGAGAATTGAGTTGGTGGGAGCGTTTGGAATGGGACGATCCCTCTGCTTTAACCACTGTTCAACCATTTTTCAATCCAGTGAGGGAAGTTCCTCTACTCATAGCGGATGCAACAACTCAAATGCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

985

Amino Acids

112.95

Weight (kDa)

7.72

Isoelectric Point (pI)

48.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 150 - 316 3.3e-37 NB-ARC domain
AAA_22 PF13401 168 - 256 6.1e-08 AAA domain
WHD_DRP PF23559 403 - 470 4.3e-11 Disease resistance protein Winged helix domain
LRR_RPS2 PF23247 811 - 931 1.7e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27190 AT4G27220 AT4G27220
fragaria_vesca FvH4_3g21750
malus_domestica MD11G1227400.v1.1 MD11G1227500.v1.1
prunus_persica Prupe.4G201800_v2.0.a1
pyrus_communis pycom11g20010
rosa_chinensis RchiOBHm_Chr5g0037231
rosa_multiflora Rmu_sc0005002.1_g000030
rosa_roxburghii Rroxscaffold_1G00043740
rosa_rugosa Rorug05G0163900 Rorug05G0163900
rosa_samantha Rh5AG253500 Rh5BG255500 Rh5CG288200 Rh5CG288300 Rh5DG263900
rosa_wichuraiana Rw5G023420 Rw5G023450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1961
AccB7I CCANNNNNTGG 1 cut(s) 2220
AccI GTMKAC 2 cut(s) 366, 386
AccII CGCG 1 cut(s) 1401
AciI CCGC 7 cut(s) 224, 276, 656, 1048, 1399, 1972, 2933
AclI AACGTT 2 cut(s) 56, 2343
AclWI GGATC 7 cut(s) 623, 795, 1121, 1424, 2111, 2276, 2861
AcoI YGGCCR 1 cut(s) 456
AcsI RAATTY 6 cut(s) 1832, 2120, 2317, 2359, 2428, 2569
AcuI CTGAAG 3 cut(s) 831, 1284, 2534
AcyI GRCGYC 2 cut(s) 443, 1958
AdeI CACNNNGTG 1 cut(s) 2535
AfaI GTAC 5 cut(s) 1107, 1623, 1983, 2158, 2667
AfiI CCNNNNNNNGG 4 cut(s) 23, 2220, 2263, 2590
AflII CTTAAG 2 cut(s) 137, 1741
AflIII ACRYGT 2 cut(s) 406, 2677
AhdI GACNNNNNGTC 2 cut(s) 1957, 1962
AjnI CCWGG 3 cut(s) 293, 412, 2589
AjuI GAANNNNNNNTTGG 2 cut(s) 1611, 1643
AleI CACNNNNGTG 1 cut(s) 1322
Alw26I GTCTC 8 cut(s) 187, 283, 424, 655, 1365, 1730, 1937, 2145
AlwI GGATC 7 cut(s) 623, 795, 1121, 1424, 2111, 2276, 2861
Ama87I CYCGRG 2 cut(s) 119, 2492
AoxI GGCC 1 cut(s) 456
ApeKI GCWGC 1 cut(s) 867
ApoI RAATTY 6 cut(s) 1832, 2120, 2317, 2359, 2428, 2569
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
Asp700I GAANNNNTTC 7 cut(s) 408, 1136, 1516, 1545, 1905, 2120, 2763
AspLEI GCGC 2 cut(s) 14, 1716
AsuHPI GGTGA 7 cut(s) 38, 610, 1373, 1390, 1886, 2183, 2521
AsuII TTCGAA 3 cut(s) 1510, 1657, 2548
AvaI CYCGRG 2 cut(s) 119, 2492
BalI TGGCCA 1 cut(s) 458
BarI GAAGNNNNNNTAC 2 cut(s) 2907, 2939
BauI CACGAG 1 cut(s) 2636
BbsI GAAGAC 5 cut(s) 881, 921, 1179, 1224, 1416
BbvI GCAGC 1 cut(s) 879
BccI CCATC 9 cut(s) 344, 433, 464, 1252, 1352, 2063, 2222, 2368, 2661
BcgI CGANNNNNNTGC 4 cut(s) 255, 289, 2855, 2889
BciT130I CCWGG 3 cut(s) 295, 414, 2591
BciVI GTATCC 1 cut(s) 2221
BcoDI GTCTC 8 cut(s) 187, 283, 424, 655, 1365, 1730, 1937, 2145
BfaI CTAG 5 cut(s) 1538, 1778, 1914, 2246, 2414
BfrI CTTAAG 2 cut(s) 137, 1741
BfuI GTATCC 1 cut(s) 2221
BglII AGATCT 2 cut(s) 880, 1134
BisI GCNGC 1 cut(s) 868
BlsI GCNGC 1 cut(s) 869
Bme1390I CCNGG 3 cut(s) 295, 414, 2591
BmeRI GACNNNNNGTC 2 cut(s) 1957, 1962
BmeT110I CYCGRG 2 cut(s) 119, 2492
BmiI GGNNCC 2 cut(s) 1288, 2063
BmrFI CCNGG 3 cut(s) 295, 414, 2591
BmrI ACTGGG 2 cut(s) 1692, 2734
BmsI GCATC 4 cut(s) 807, 1374, 2018, 2926
BmuI ACTGGG 2 cut(s) 1692, 2734
BoxI GACNNNNGTC 1 cut(s) 539
BpiI GAAGAC 5 cut(s) 881, 921, 1179, 1224, 1416
BpmI CTGGAG 3 cut(s) 1996, 2018, 2612
Bpu14I TTCGAA 3 cut(s) 1510, 1657, 2548
BpuEI CTTGAG 8 cut(s) 46, 182, 211, 278, 307, 362, 1105, 1817
BsaAI YACGTR 1 cut(s) 2678
BsaBI GATNNNNATC 2 cut(s) 786, 1362
BsaHI GRCGYC 2 cut(s) 443, 1958
BsaI GGTCTC 3 cut(s) 283, 424, 2145
BsaJI CCNNGG 4 cut(s) 293, 378, 413, 1109
BsaWI WCCGGW 1 cut(s) 391
Bsc4I CCNNNNNNNGG 4 cut(s) 23, 2220, 2263, 2590
Bse1I ACTGG 5 cut(s) 669, 1698, 2508, 2729, 2906
Bse3DI GCAATG 1 cut(s) 2283
Bse8I GATNNNNATC 2 cut(s) 786, 1362
BseBI CCWGG 3 cut(s) 295, 414, 2591
BseDI CCNNGG 4 cut(s) 293, 378, 413, 1109
BseGI GGATG 7 cut(s) 303, 355, 798, 955, 1263, 2033, 2941
BseJI GATNNNNATC 2 cut(s) 786, 1362
BseLI CCNNNNNNNGG 4 cut(s) 23, 2220, 2263, 2590
BseMI GCAATG 1 cut(s) 2283
BseMII CTCAG 4 cut(s) 435, 1596, 2487, 2681
BseNI ACTGG 5 cut(s) 669, 1698, 2508, 2729, 2906
BseRI GAGGAG 3 cut(s) 534, 2188, 2609
BseXI GCAGC 1 cut(s) 879
Bsh1236I CGCG 1 cut(s) 1401
BshFI GGCC 1 cut(s) 458
BsiHKCI CYCGRG 2 cut(s) 119, 2492
BsiSI CCGG 1 cut(s) 392
BslFI GGGAC 2 cut(s) 1690, 2876
BslI CCNNNNNNNGG 4 cut(s) 23, 2220, 2263, 2590
BsmAI GTCTC 8 cut(s) 187, 283, 424, 655, 1365, 1730, 1937, 2145
BsmFI GGGAC 2 cut(s) 1690, 2876
BsmI GAATGC 2 cut(s) 1905, 2747
BsnI GGCC 1 cut(s) 458
Bso31I GGTCTC 3 cut(s) 283, 424, 2145
BsoBI CYCGRG 2 cut(s) 119, 2492
Bsp119I TTCGAA 3 cut(s) 1510, 1657, 2548
BspACI CCGC 7 cut(s) 224, 276, 656, 1048, 1399, 1972, 2933
BspANI GGCC 1 cut(s) 458
BspCNI CTCAG 4 cut(s) 434, 1595, 2486, 2682
BspFNI CGCG 1 cut(s) 1401
BspHI TCATGA 1 cut(s) 160
BspLI GGNNCC 2 cut(s) 1288, 2063
BspPI GGATC 7 cut(s) 623, 795, 1121, 1424, 2111, 2276, 2861
BspT104I TTCGAA 3 cut(s) 1510, 1657, 2548
BspTI CTTAAG 2 cut(s) 137, 1741
BspTNI GGTCTC 3 cut(s) 283, 424, 2145
BsrDI GCAATG 1 cut(s) 2283
BsrI ACTGG 5 cut(s) 669, 1698, 2508, 2729, 2906
BssECI CCNNGG 4 cut(s) 293, 378, 413, 1109
BssNI GRCGYC 2 cut(s) 443, 1958
BssSI CACGAG 1 cut(s) 2636
BssT1I CCWWGG 1 cut(s) 1109
Bst2BI CACGAG 1 cut(s) 2636
Bst2UI CCWGG 3 cut(s) 295, 414, 2591
Bst4CI ACNGT 6 cut(s) 1033, 1324, 1378, 2014, 2771, 2887
Bst6I CTCTTC 9 cut(s) 564, 690, 807, 1122, 1512, 1557, 1659, 1742, 2013
BstACI GRCGYC 2 cut(s) 443, 1958
BstAFI CTTAAG 2 cut(s) 137, 1741
BstBAI YACGTR 1 cut(s) 2678
BstBI TTCGAA 3 cut(s) 1510, 1657, 2548
BstC8I GCNNGC 4 cut(s) 1497, 1641, 2007, 2543
BstDEI CTNAG 6 cut(s) 421, 1094, 1582, 1670, 2473, 2690
BstDSI CCRYGG 1 cut(s) 378
BstF5I GGATG 7 cut(s) 303, 355, 798, 955, 1263, 2033, 2941
BstFNI CGCG 1 cut(s) 1401
BstHHI GCGC 2 cut(s) 14, 1716
BstMAI GTCTC 8 cut(s) 187, 283, 424, 655, 1365, 1730, 1937, 2145
BstMWI GCNNNNNNNGC 2 cut(s) 480, 2161
BstNI CCWGG 3 cut(s) 295, 414, 2591
BstNSI RCATGY 2 cut(s) 373, 410
BstPAI GACNNNNGTC 1 cut(s) 539
BstSCI CCNGG 3 cut(s) 293, 412, 2589
BstUI CGCG 1 cut(s) 1401
BstV1I GCAGC 1 cut(s) 879
BstV2I GAAGAC 5 cut(s) 881, 921, 1179, 1224, 1416
BstX2I RGATCY 3 cut(s) 787, 880, 1134
BstXI CCANNNNNNTGG 2 cut(s) 500, 784
BstYI RGATCY 3 cut(s) 787, 880, 1134
BsuI GTATCC 1 cut(s) 2221
BsuRI GGCC 1 cut(s) 458
BtgI CCRYGG 1 cut(s) 378
BtsCI GGATG 7 cut(s) 303, 355, 798, 955, 1263, 2033, 2941
BtsIMutI CAGTG 4 cut(s) 2510, 2767, 2883, 2913
Cac8I GCNNGC 4 cut(s) 1497, 1641, 2007, 2543
CciI TCATGA 1 cut(s) 160
CfoI GCGC 2 cut(s) 14, 1716
CseI GACGC 4 cut(s) 432, 556, 926, 2438
Csp6I GTAC 5 cut(s) 1106, 1622, 1982, 2157, 2666
CviQI GTAC 5 cut(s) 1106, 1622, 1982, 2157, 2666
DdeI CTNAG 6 cut(s) 421, 1094, 1582, 1670, 2473, 2690
DraI TTTAAA 3 cut(s) 1335, 1756, 2085
DraIII CACNNNGTG 1 cut(s) 2535
DriI GACNNNNNGTC 2 cut(s) 1957, 1962
EaeI YGGCCR 1 cut(s) 456
Eam1104I CTCTTC 9 cut(s) 564, 690, 807, 1122, 1512, 1557, 1659, 1742, 2013
Eam1105I GACNNNNNGTC 2 cut(s) 1957, 1962
EarI CTCTTC 9 cut(s) 564, 690, 807, 1122, 1512, 1557, 1659, 1742, 2013
EciI GGCGGA 1 cut(s) 239
Eco130I CCWWGG 1 cut(s) 1109
Eco31I GGTCTC 3 cut(s) 283, 424, 2145
Eco57I CTGAAG 3 cut(s) 831, 1284, 2534
Eco88I CYCGRG 2 cut(s) 119, 2492
EcoRI GAATTC 1 cut(s) 2359
EcoRII CCWGG 3 cut(s) 293, 412, 2589
EcoT14I CCWWGG 1 cut(s) 1109
EcoT22I ATGCAT 1 cut(s) 1389
ErhI CCWWGG 1 cut(s) 1109
FalI AAGNNNNNCTT 4 cut(s) 1479, 1511, 1504, 1536
FaqI GGGAC 2 cut(s) 1690, 2876
FauI CCCGC 1 cut(s) 1041
FauNDI CATATG 1 cut(s) 1412
FblI GTMKAC 2 cut(s) 366, 386
Fnu4HI GCNGC 1 cut(s) 868
FokI GGATG 7 cut(s) 310, 362, 785, 962, 1270, 2040, 2948
Fsp4HI GCNGC 1 cut(s) 868
FspBI CTAG 5 cut(s) 1538, 1778, 1914, 2246, 2414
GlaI GCGC 2 cut(s) 13, 1715
GluI GCNGC 1 cut(s) 868
GsuI CTGGAG 3 cut(s) 1996, 2018, 2612
HaeIII GGCC 1 cut(s) 458
HapII CCGG 1 cut(s) 392
HgaI GACGC 4 cut(s) 432, 556, 926, 2438
HhaI GCGC 2 cut(s) 14, 1716
Hin1I GRCGYC 2 cut(s) 443, 1958
Hin6I GCGC 2 cut(s) 12, 1714
HinP1I GCGC 2 cut(s) 12, 1714
HincII GTYRAC 3 cut(s) 54, 367, 2458
HindII GTYRAC 3 cut(s) 54, 367, 2458
HindIII AAGCTT 3 cut(s) 560, 1493, 2543
HpaII CCGG 1 cut(s) 392
HphI GGTGA 7 cut(s) 38, 610, 1373, 1390, 1886, 2183, 2521
Hpy166II GTNNAC 6 cut(s) 54, 367, 387, 2042, 2458, 2789
Hpy188I TCNGA 7 cut(s) 840, 964, 1037, 1868, 2331, 2407, 2476
Hpy8I GTNNAC 6 cut(s) 54, 367, 387, 2042, 2458, 2789
Hpy99I CGWCG 1 cut(s) 2454
HpyAV CCTTC 9 cut(s) 340, 705, 1259, 1506, 1512, 1556, 1782, 2429, 2479
HpyCH4III ACNGT 6 cut(s) 1033, 1324, 1378, 2014, 2771, 2887
HpyCH4IV ACGT 7 cut(s) 56, 96, 765, 1958, 2199, 2343, 2677
HpyCH4V TGCA 9 cut(s) 936, 944, 983, 1387, 1474, 1639, 2626, 2721, 2939
HpyF10VI GCNNNNNNNGC 2 cut(s) 480, 2161
HpyF3I CTNAG 6 cut(s) 421, 1094, 1582, 1670, 2473, 2690
HpySE526I ACGT 7 cut(s) 56, 96, 765, 1958, 2199, 2343, 2677
Hsp92I GRCGYC 2 cut(s) 443, 1958
HspAI GCGC 2 cut(s) 12, 1714
LmnI GCTCC 4 cut(s) 1504, 1977, 2067, 2848
Lsp1109I GCAGC 1 cut(s) 879
LweI GCATC 4 cut(s) 807, 1374, 2018, 2926
MaeI CTAG 5 cut(s) 1538, 1778, 1914, 2246, 2414
MaeII ACGT 7 cut(s) 56, 96, 765, 1958, 2199, 2343, 2677
MaeIII GTNAC 6 cut(s) 143, 1234, 1964, 2144, 2189, 2297
MflI RGATCY 3 cut(s) 787, 880, 1134
MlsI TGGCCA 1 cut(s) 458
MluNI TGGCCA 1 cut(s) 458
MlyI GAGTC 7 cut(s) 59, 75, 189, 392, 1292, 1672, 2612
MmeI TCCRAC 5 cut(s) 703, 1015, 1673, 1827, 2149
Mox20I TGGCCA 1 cut(s) 458
Mph1103I ATGCAT 1 cut(s) 1389
MroXI GAANNNNTTC 7 cut(s) 408, 1136, 1516, 1545, 1905, 2120, 2763
MscI TGGCCA 1 cut(s) 458
MslI CAYNNNNRTG 2 cut(s) 1000, 1322
Msp20I TGGCCA 1 cut(s) 458
MspA1I CMGCKG 2 cut(s) 1974, 2779
MspCI CTTAAG 2 cut(s) 137, 1741
MspI CCGG 1 cut(s) 392
MspR9I CCNGG 3 cut(s) 295, 414, 2591
Mva1269I GAATGC 2 cut(s) 1905, 2747
MvaI CCWGG 3 cut(s) 295, 414, 2591
MvnI CGCG 1 cut(s) 1401
MwoI GCNNNNNNNGC 2 cut(s) 480, 2161
NdeI CATATG 1 cut(s) 1412
NlaIV GGNNCC 2 cut(s) 1288, 2063
NmuCI GTSAC 3 cut(s) 1964, 2189, 2297
NsiI ATGCAT 1 cut(s) 1389
NspI RCATGY 2 cut(s) 373, 410
NspV TTCGAA 3 cut(s) 1510, 1657, 2548
OliI CACNNNNGTG 1 cut(s) 1322
PaeR7I CTCGAG 1 cut(s) 119
PagI TCATGA 1 cut(s) 160
PciI ACATGT 1 cut(s) 406
PcsI WCGNNNNNNNCGW 1 cut(s) 2545
PctI GAATGC 2 cut(s) 1905, 2747
PdmI GAANNNNTTC 7 cut(s) 408, 1136, 1516, 1545, 1905, 2120, 2763
PflMI CCANNNNNTGG 1 cut(s) 2220
PkrI GCNGC 1 cut(s) 869
PleI GAGTC 7 cut(s) 58, 74, 189, 391, 1292, 1672, 2612
PpsI GAGTC 7 cut(s) 58, 74, 189, 391, 1292, 1672, 2612
Ppu21I YACGTR 1 cut(s) 2678
PscI ACATGT 1 cut(s) 406
PshAI GACNNNNGTC 1 cut(s) 539
Psp1406I AACGTT 2 cut(s) 56, 2343
Psp6I CCWGG 3 cut(s) 293, 412, 2589
PspGI CCWGG 3 cut(s) 293, 412, 2589
PspN4I GGNNCC 2 cut(s) 1288, 2063
PsuI RGATCY 3 cut(s) 787, 880, 1134
PvuII CAGCTG 1 cut(s) 2779
RsaI GTAC 5 cut(s) 1107, 1623, 1983, 2158, 2667
RsaNI GTAC 5 cut(s) 1106, 1622, 1982, 2157, 2666
RseI CAYNNNNRTG 2 cut(s) 1000, 1322
SalI GTCGAC 1 cut(s) 365
SatI GCNGC 1 cut(s) 868
SchI GAGTC 7 cut(s) 59, 75, 189, 392, 1292, 1672, 2612
ScrFI CCNGG 3 cut(s) 295, 414, 2591
SfaNI GCATC 4 cut(s) 807, 1374, 2018, 2926
Sfr274I CTCGAG 1 cut(s) 119
SfuI TTCGAA 3 cut(s) 1510, 1657, 2548
SlaI CTCGAG 1 cut(s) 119
SmiMI CAYNNNNRTG 2 cut(s) 1000, 1322
SsiI CCGC 7 cut(s) 224, 276, 656, 1048, 1399, 1972, 2933
SspMI CTAG 5 cut(s) 1538, 1778, 1914, 2246, 2414
StyD4I CCNGG 3 cut(s) 293, 412, 2589
StyI CCWWGG 1 cut(s) 1109
TaaI ACNGT 6 cut(s) 1033, 1324, 1378, 2014, 2771, 2887
TaiI ACGT 7 cut(s) 59, 99, 768, 1961, 2202, 2346, 2680
TscAI CASTG 4 cut(s) 2517, 2774, 2890, 2913
TseFI GTSAC 3 cut(s) 1964, 2189, 2297
TseI GCWGC 1 cut(s) 867
Tsp45I GTSAC 3 cut(s) 1964, 2189, 2297
TspGWI ACGGA 1 cut(s) 367
TspRI CASTG 4 cut(s) 2517, 2774, 2890, 2913
Van91I CCANNNNNTGG 1 cut(s) 2220
Vha464I CTTAAG 2 cut(s) 137, 1741
XapI RAATTY 6 cut(s) 1832, 2120, 2317, 2359, 2428, 2569
XceI RCATGY 2 cut(s) 373, 410
XcmI CCANNNNNNNNNTGG 1 cut(s) 2132
XhoI CTCGAG 1 cut(s) 119
XmiI GTMKAC 2 cut(s) 366, 386
XmnI GAANNNNTTC 7 cut(s) 408, 1136, 1516, 1545, 1905, 2120, 2763
XspI CTAG 5 cut(s) 1538, 1778, 1914, 2246, 2414
ZraI GACGTC 1 cut(s) 1959
Zsp2I ATGCAT 1 cut(s) 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.