MD11G1227500.v1.1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0011026
Physical Location & Seq
Reverse (-)
33126967 .. 33129094
2128 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1227500.v1.1.491

Sequence Viewer

Length: 1932 bp
ATGCAGGAAATCGTGGGTGCTATCATTGAAGTTGGTAGGCGTGTCGGCAACTTCACGTTTTCCCTGCTTTCCACCCTGAGAAAGTTCCAGAAAAACATCCAGACTTTGAAGTATGAGCGGCAGAAGCTCTCTCGCTGCAAGTACGGAAAAATAGAAGAGGTCAATTTATCAAGATTAGAAGGGAAGCACCCCCCTTGGCAAGTTATGGATTGGCTTGAAAGGGTGGAGAAGATCGAACGTGAGGTGGAAGGGATTGAACATGAATCCAGGCTACTTTTGGAGGCAGATCCCGTTGATGCTCCCTGTGGCCTGGGGTGTATGCTTGACTCTAACATGCGCCGCAAGTACCAACTTAGCAAAGCTGCAGCAAAGAAGCGTGATGAGGTGAGAAAACTTACTGAGGAGTCCTGCAATCTTCCACCAATGGAAGATAGGAAGCCAAGTGATATAGCGGTTGAGCATATTCTGGCGCCATCTCTTGTTGGTCAGAAAGCACCAGAGATCCTAAAGCAGCTTATGGAACTTTTGGCAGTTAAAGAGATCACAAGGATTTCTGTTTATGGAATGGGCGGTTCTGGAAAGACTACGCTAGTGAAAACCTTGAATAATCAGCTTGAATCTTGTGGCAGGGAGTTATTTGATATGGTCATTTGGGTCCCTGTGTCAAATGACCTGGATATGAAAAAGGTTCAATCACGAATTGCTGAGAGGTTGAATTTAGCACTGTATGCAGAAGAGAGCACCGAGCGTAGAGCTAGCAAACTGCAGCAAGTATTGAAGTCCGGAAAGAGGTTCCTGTTCATTCTGGATGACGTTTGGGAGAAAATTGATTTGCACAGCGTGGGGATACCACAAGGCGATGGGCAAGCAAATTGTAAGATCGTTTTGACAACGCGAAATCTTGACGTGTGTAGGGAAATGATGACCGATAAAGCACTAAAGATGGAACTTCTGACCGACGAAGAGTCCTGGACTTTATTTGCTCAGAATGCAGGAAATGTGGTGGAGTTAGAAGACATAAATCCTCTAGCTAAAGAAATTGCTAGGGAATGTGGTGGTTTGCCTCTGGCTATCGAGACTATGGGGAAGTCCATGAGAGACAAAACAATGATACAGCTATGGAGGAATGCACTCTGCCAACTGAAGCTTTCCGAACCACACTTCGGGAGCTTGGACAAGGTGTATCTGCGGTTGCAATTGAGCTACAATGCACTGCCAAGTAAGATCTATAAGTCCTGCTTCTTATCTTGTTCGCTGTTCCCAGAAAATTTCTCAATTCAGATAAGGGAACTAATATTGTTGTGGTTATCTGATGGAATTATTGGGGAACGTCAAACTTTAGAGGAGTCCATTAATGATGGGCATGCTAAACTTGAATATTTGAAGGATTGTTGCATGTTAGAACAGGGTGAAGGCATTGGCACCGTAAAGATGCACAGTATATTGAGGGAGGTTGCCATTTGGATATCATCTAATGAGAAAGAAACCGGGTTTTTCAGCAGCCCAGTGCAAGGAATGCTAAAGCTGAAAAAATCGGTCAGAAGAGCTTCGTTTATGAGCAATTCCATCAAGAGTTTGCCAGCTCAATTGCTTGGGGGATCCGACCTAACGGTGTTGTTCCTGCATTGTAATCCTTTAAATAGAATCCCTGATGGTTTCTTTCAAGAACATAGAGTGCTAAGATTCTTGAATTTAAGTAGCACTCTAATAACTTCCCTGCCTTCTTCTATTCTTCAGCTAAGGGAGCTACATACTCTTCTCTTAAGAGACTGTCATGCTCTAGAACTCCTACCCCCACTCGGAGCTCTTTATAAACTTCAAGTGCTCGATCTCTATGGAACTCGAATAAGAAAGCTTCCGAAAGACATGGGAAAGCTGATTCATCTGAGAGATCTCAATTTGTCACACACTCGCTTTTTACAATGGTTATAA

Protein Analysis

644

Amino Acids

73.26

Weight (kDa)

8.47

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 170 - 332 6.6e-42 NB-ARC domain
AAA_22 PF13401 184 - 272 5.8e-06 AAA domain
WHD_DRP PF23559 419 - 486 6.5e-06 Disease resistance protein Winged helix domain
LRR_14 PF23598 513 - 636 1.6e-08 Leucine-rich repeat region
LRR_8 PF13855 536 - 592 1.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27190 AT4G27220 AT4G27220
fragaria_vesca FvH4_3g21750
malus_domestica MD11G1227400.v1.1 MD11G1227500.v1.1
prunus_persica Prupe.4G201800_v2.0.a1
pyrus_communis pycom11g20010
rosa_chinensis RchiOBHm_Chr5g0037231
rosa_multiflora Rmu_sc0005002.1_g000030
rosa_roxburghii Rroxscaffold_1G00043740
rosa_rugosa Rorug05G0163900 Rorug05G0163900
rosa_samantha Rh5AG253500 Rh5BG255500 Rh5CG288200 Rh5CG288300 Rh5DG263900
rosa_wichuraiana Rw5G023420 Rw5G023450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1812, 1930
AccB1I GGYRCC 2 cut(s) 469, 1421
AccBSI CCGCTC 1 cut(s) 118
AccII CGCG 1 cut(s) 895
AccIII TCCGGA 1 cut(s) 782
AciI CCGC 5 cut(s) 118, 340, 452, 570, 1189
AclWI GGATC 4 cut(s) 281, 496, 1593, 1606
AcsI RAATTY 3 cut(s) 715, 1267, 1690
AcuI CTGAAG 2 cut(s) 1163, 1718
AcyI GRCGYC 1 cut(s) 470
AdeI CACNNNGTG 1 cut(s) 841
AfaI GTAC 2 cut(s) 143, 347
AfiI CCNNNNNNNGG 4 cut(s) 789, 1163, 1511, 1799
AflII CTTAAG 1 cut(s) 1762
AflIII ACRYGT 1 cut(s) 906
AhdI GACNNNNNGTC 1 cut(s) 964
AjiI CACGTC 1 cut(s) 907
AjnI CCWGG 4 cut(s) 266, 309, 672, 968
Alw21I GWGCWC 3 cut(s) 743, 1807, 1827
Alw26I GTCTC 3 cut(s) 1070, 1092, 1761
AlwI GGATC 4 cut(s) 281, 496, 1593, 1606
Aor13HI TCCGGA 1 cut(s) 782
AoxI GGCC 1 cut(s) 307
ApeKI GCWGC 6 cut(s) 135, 362, 365, 511, 766, 1500
ApoI RAATTY 3 cut(s) 715, 1267, 1690
AseI ATTAAT 1 cut(s) 1353
Asp700I GAANNNNTTC 1 cut(s) 1546
AspLEI GCGC 2 cut(s) 339, 472
AspS9I GGNCC 1 cut(s) 655
AsuC2I CCSGG 1 cut(s) 1489
AsuHPI GGTGA 2 cut(s) 397, 1421
AsuNHI GCTAGC 1 cut(s) 755
AvaII GGWCC 1 cut(s) 655
BamHI GGATCC 1 cut(s) 1598
BanI GGYRCC 2 cut(s) 469, 1421
BanII GRGCYC 1 cut(s) 1807
BbsI GAAGAC 1 cut(s) 1020
Bbv12I GWGCWC 3 cut(s) 743, 1807, 1827
BbvI GCAGC 6 cut(s) 122, 349, 377, 523, 778, 1512
BccI CCATC 7 cut(s) 481, 854, 937, 1307, 1352, 1574, 1646
BciT130I CCWGG 4 cut(s) 268, 311, 674, 970
BciVI GTATCC 1 cut(s) 840
BcnI CCSGG 1 cut(s) 1489
BcoDI GTCTC 3 cut(s) 1070, 1092, 1761
BfaI CTAG 5 cut(s) 590, 756, 1028, 1044, 1781
BfmI CTRYAG 2 cut(s) 363, 764
BfoI RGCGCY 1 cut(s) 473
BfrI CTTAAG 1 cut(s) 1762
BfuI GTATCC 1 cut(s) 840
BglII AGATCT 2 cut(s) 1224, 1891
BisI GCNGC 8 cut(s) 119, 136, 340, 363, 366, 512, 767, 1501
BlsI GCNGC 8 cut(s) 120, 137, 341, 364, 367, 513, 768, 1502
Bme1390I CCNGG 5 cut(s) 268, 311, 674, 970, 1489
Bme18I GGWCC 1 cut(s) 655
BmeRI GACNNNNNGTC 1 cut(s) 964
BmgBI CACGTC 1 cut(s) 907
BmgT120I GGNCC 1 cut(s) 655
BmiI GGNNCC 6 cut(s) 471, 656, 657, 794, 1423, 1600
BmrFI CCNGG 5 cut(s) 268, 311, 674, 970, 1489
BmrI ACTGGG 1 cut(s) 1499
BmsI GCATC 2 cut(s) 286, 1422
BmtI GCTAGC 1 cut(s) 759
BmuI ACTGGG 1 cut(s) 1499
BpiI GAAGAC 1 cut(s) 1020
Bpu10I CCTNAGC 1 cut(s) 1739
BpuMI CCSGG 1 cut(s) 1489
BsaHI GRCGYC 1 cut(s) 470
BsaJI CCNNGG 2 cut(s) 194, 310
BsaWI WCCGGW 1 cut(s) 782
Bsc4I CCNNNNNNNGG 4 cut(s) 789, 1163, 1511, 1799
Bse1I ACTGG 1 cut(s) 1505
BseAI TCCGGA 1 cut(s) 782
BseBI CCWGG 4 cut(s) 268, 311, 674, 970
BseDI CCNNGG 2 cut(s) 194, 310
BseGI GGATG 2 cut(s) 96, 814
BseLI CCNNNNNNNGG 4 cut(s) 789, 1163, 1511, 1799
BseMII CTCAG 5 cut(s) 68, 390, 696, 998, 1877
BseNI ACTGG 1 cut(s) 1505
BseRI GAGGAG 2 cut(s) 416, 1358
BseXI GCAGC 6 cut(s) 122, 349, 377, 523, 778, 1512
Bsh1236I CGCG 1 cut(s) 895
BshFI GGCC 1 cut(s) 309
BshNI GGYRCC 2 cut(s) 469, 1421
BsiHKAI GWGCWC 3 cut(s) 743, 1807, 1827
BsiSI CCGG 2 cut(s) 783, 1488
BslFI GGGAC 1 cut(s) 641
BslI CCNNNNNNNGG 4 cut(s) 789, 1163, 1511, 1799
BsmAI GTCTC 3 cut(s) 1070, 1092, 1761
BsmFI GGGAC 1 cut(s) 641
BsmI GAATGC 3 cut(s) 994, 1132, 1521
BsnI GGCC 1 cut(s) 309
Bsp1286I GDGCHC 3 cut(s) 743, 1807, 1827
Bsp13I TCCGGA 1 cut(s) 782
Bsp143I GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
BspACI CCGC 5 cut(s) 118, 340, 452, 570, 1189
BspANI GGCC 1 cut(s) 309
BspCNI CTCAG 5 cut(s) 69, 391, 697, 997, 1878
BspEI TCCGGA 1 cut(s) 782
BspFNI CGCG 1 cut(s) 895
BspLI GGNNCC 6 cut(s) 471, 656, 657, 794, 1423, 1600
BspMAI CTGCAG 2 cut(s) 367, 768
BspOI GCTAGC 1 cut(s) 759
BspPI GGATC 4 cut(s) 281, 496, 1593, 1606
BspQI GCTCTTC 1 cut(s) 1537
BspT107I GGYRCC 2 cut(s) 469, 1421
BspTI CTTAAG 1 cut(s) 1762
BsrBI CCGCTC 1 cut(s) 118
BsrI ACTGG 1 cut(s) 1505
BssECI CCNNGG 2 cut(s) 194, 310
BssMI GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
BssNI GRCGYC 1 cut(s) 470
BssT1I CCWWGG 1 cut(s) 194
Bst2UI CCWGG 4 cut(s) 268, 311, 674, 970
Bst4CI ACNGT 5 cut(s) 726, 1426, 1439, 1612, 1772
Bst6I CTCTTC 5 cut(s) 150, 729, 957, 1537, 1761
BstACI GRCGYC 1 cut(s) 470
BstAFI CTTAAG 1 cut(s) 1762
BstAPI GCANNNNNTGC 2 cut(s) 728, 1516
BstC8I GCNNGC 4 cut(s) 757, 867, 1365, 1581
BstDEI CTNAG 8 cut(s) 77, 353, 399, 705, 984, 1679, 1739, 1886
BstF5I GGATG 2 cut(s) 96, 814
BstFNI CGCG 1 cut(s) 895
BstH2I RGCGCY 1 cut(s) 473
BstHHI GCGC 2 cut(s) 339, 472
BstKTI GATC 9 cut(s) 234, 289, 504, 543, 882, 1227, 1601, 1831, 1894
BstMAI GTCTC 3 cut(s) 1070, 1092, 1761
BstMBI GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
BstMWI GCNNNNNNNGC 5 cut(s) 124, 728, 989, 1516, 1744
BstNI CCWGG 4 cut(s) 268, 311, 674, 970
BstNSI RCATGY 3 cut(s) 337, 1367, 1399
BstSCI CCNGG 5 cut(s) 266, 309, 672, 968, 1487
BstSFI CTRYAG 2 cut(s) 363, 764
BstUI CGCG 1 cut(s) 895
BstV1I GCAGC 6 cut(s) 122, 349, 377, 523, 778, 1512
BstV2I GAAGAC 1 cut(s) 1020
BstX2I RGATCY 5 cut(s) 286, 501, 1224, 1598, 1891
BstYI RGATCY 5 cut(s) 286, 501, 1224, 1598, 1891
BsuI GTATCC 1 cut(s) 840
BsuRI GGCC 1 cut(s) 309
BtgZI GCGATG 1 cut(s) 873
BtrI CACGTC 1 cut(s) 907
BtsCI GGATG 2 cut(s) 96, 814
BtsI GCAGTG 1 cut(s) 1211
BtsIMutI CAGTG 3 cut(s) 722, 1211, 1512
Cac8I GCNNGC 4 cut(s) 757, 867, 1365, 1581
CfoI GCGC 2 cut(s) 339, 472
Cfr13I GGNCC 1 cut(s) 655
Csp6I GTAC 2 cut(s) 142, 346
CviAII CATG 7 cut(s) 260, 334, 1093, 1364, 1396, 1775, 1867
CviQI GTAC 2 cut(s) 142, 346
DdeI CTNAG 8 cut(s) 77, 353, 399, 705, 984, 1679, 1739, 1886
DinI GGCGCC 1 cut(s) 471
DpnI GATC 9 cut(s) 233, 288, 503, 542, 881, 1226, 1600, 1830, 1893
DpnII GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
DraI TTTAAA 1 cut(s) 1638
DraIII CACNNNGTG 1 cut(s) 841
DriI GACNNNNNGTC 1 cut(s) 964
Eam1104I CTCTTC 5 cut(s) 150, 729, 957, 1537, 1761
Eam1105I GACNNNNNGTC 1 cut(s) 964
EarI CTCTTC 5 cut(s) 150, 729, 957, 1537, 1761
Ecl136II GAGCTC 1 cut(s) 1805
Eco130I CCWWGG 1 cut(s) 194
Eco24I GRGCYC 1 cut(s) 1807
Eco32I GATATC 1 cut(s) 1467
Eco47I GGWCC 1 cut(s) 655
Eco53kI GAGCTC 1 cut(s) 1805
Eco57I CTGAAG 2 cut(s) 1163, 1718
EcoICRI GAGCTC 1 cut(s) 1805
EcoO109I RGGNCCY 1 cut(s) 655
EcoRII CCWGG 4 cut(s) 266, 309, 672, 968
EcoRV GATATC 1 cut(s) 1467
EcoT14I CCWWGG 1 cut(s) 194
EcoT38I GRGCYC 1 cut(s) 1807
EgeI GGCGCC 1 cut(s) 471
EheI GGCGCC 1 cut(s) 471
ErhI CCWWGG 1 cut(s) 194
FaeI CATG 7 cut(s) 263, 337, 1096, 1367, 1399, 1778, 1870
FalI AAGNNNNNCTT 2 cut(s) 1223, 1255
FaqI GGGAC 1 cut(s) 641
FatI CATG 7 cut(s) 259, 333, 1092, 1363, 1395, 1774, 1866
Fnu4HI GCNGC 8 cut(s) 119, 136, 340, 363, 366, 512, 767, 1501
FokI GGATG 2 cut(s) 83, 821
FriOI GRGCYC 1 cut(s) 1807
Fsp4HI GCNGC 8 cut(s) 119, 136, 340, 363, 366, 512, 767, 1501
FspBI CTAG 5 cut(s) 590, 756, 1028, 1044, 1781
GlaI GCGC 2 cut(s) 338, 471
GluI GCNGC 8 cut(s) 119, 136, 340, 363, 366, 512, 767, 1501
HaeII RGCGCY 1 cut(s) 473
HaeIII GGCC 1 cut(s) 309
HapII CCGG 2 cut(s) 783, 1488
HhaI GCGC 2 cut(s) 339, 472
Hin1I GRCGYC 1 cut(s) 470
Hin1II CATG 7 cut(s) 263, 337, 1096, 1367, 1399, 1778, 1870
Hin6I GCGC 2 cut(s) 337, 470
HinP1I GCGC 2 cut(s) 337, 470
HindIII AAGCTT 2 cut(s) 1145, 1853
HinfI GANTC 9 cut(s) 263, 326, 404, 617, 965, 1346, 1644, 1683, 1879
HpaII CCGG 2 cut(s) 783, 1488
HphI GGTGA 2 cut(s) 397, 1421
Hpy99I CGWCG 1 cut(s) 962
HpyAV CCTTC 5 cut(s) 173, 242, 1378, 1406, 1731
HpyCH4III ACNGT 5 cut(s) 726, 1426, 1439, 1612, 1772
HpyCH4IV ACGT 5 cut(s) 56, 238, 813, 906, 1330
HpyF10VI GCNNNNNNNGC 5 cut(s) 124, 728, 989, 1516, 1744
HpyF3I CTNAG 8 cut(s) 77, 353, 399, 705, 984, 1679, 1739, 1886
HpySE526I ACGT 5 cut(s) 56, 238, 813, 906, 1330
Hsp92I GRCGYC 1 cut(s) 470
Hsp92II CATG 7 cut(s) 263, 337, 1096, 1367, 1399, 1778, 1870
HspAI GCGC 2 cut(s) 337, 470
KasI GGCGCC 1 cut(s) 469
KflI GGGWCCC 1 cut(s) 655
Kpn2I TCCGGA 1 cut(s) 782
Kzo9I GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
LguI GCTCTTC 1 cut(s) 1537
LmnI GCTCC 4 cut(s) 304, 1167, 1744, 1802
Lsp1109I GCAGC 6 cut(s) 122, 349, 377, 523, 778, 1512
LweI GCATC 2 cut(s) 286, 1422
MaeI CTAG 5 cut(s) 590, 756, 1028, 1044, 1781
MaeII ACGT 5 cut(s) 56, 238, 813, 906, 1330
MaeIII GTNAC 1 cut(s) 1902
MalI GATC 9 cut(s) 233, 288, 503, 542, 881, 1226, 1600, 1830, 1893
MbiI CCGCTC 1 cut(s) 118
MboI GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
MfeI CAATTG 2 cut(s) 1196, 1586
MflI RGATCY 5 cut(s) 286, 501, 1224, 1598, 1891
MhlI GDGCHC 3 cut(s) 743, 1807, 1827
Mly113I GGCGCC 1 cut(s) 470
MlyI GAGTC 4 cut(s) 320, 413, 974, 1355
MmeI TCCRAC 1 cut(s) 1626
MroI TCCGGA 1 cut(s) 782
MroXI GAANNNNTTC 1 cut(s) 1546
MseI TTAA 5 cut(s) 534, 1353, 1637, 1694, 1763
MspCI CTTAAG 1 cut(s) 1762
MspI CCGG 2 cut(s) 783, 1488
MspR9I CCNGG 5 cut(s) 268, 311, 674, 970, 1489
MunI CAATTG 2 cut(s) 1196, 1586
Mva1269I GAATGC 3 cut(s) 994, 1132, 1521
MvaI CCWGG 4 cut(s) 268, 311, 674, 970
MvnI CGCG 1 cut(s) 895
MwoI GCNNNNNNNGC 5 cut(s) 124, 728, 989, 1516, 1744
NarI GGCGCC 1 cut(s) 470
NciI CCSGG 1 cut(s) 1489
NdeII GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
NheI GCTAGC 1 cut(s) 755
NlaIII CATG 7 cut(s) 263, 337, 1096, 1367, 1399, 1778, 1870
NlaIV GGNNCC 6 cut(s) 471, 656, 657, 794, 1423, 1600
NmuCI GTSAC 1 cut(s) 1902
NspI RCATGY 3 cut(s) 337, 1367, 1399
PaeI GCATGC 1 cut(s) 1367
PciSI GCTCTTC 1 cut(s) 1537
PctI GAATGC 3 cut(s) 994, 1132, 1521
PdmI GAANNNNTTC 1 cut(s) 1546
PfeI GAWTC 5 cut(s) 263, 617, 1644, 1683, 1879
PfoI TCCNGGA 1 cut(s) 968
PkrI GCNGC 8 cut(s) 120, 137, 341, 364, 367, 513, 768, 1502
PleI GAGTC 4 cut(s) 320, 412, 973, 1354
PluTI GGCGCC 1 cut(s) 473
PpsI GAGTC 4 cut(s) 320, 412, 973, 1354
PpuMI RGGWCCY 1 cut(s) 655
PshBI ATTAAT 1 cut(s) 1353
PsiI TTATAA 2 cut(s) 1812, 1930
Psp124BI GAGCTC 1 cut(s) 1807
Psp5II RGGWCCY 1 cut(s) 655
Psp6I CCWGG 4 cut(s) 266, 309, 672, 968
PspGI CCWGG 4 cut(s) 266, 309, 672, 968
PspN4I GGNNCC 6 cut(s) 471, 656, 657, 794, 1423, 1600
PspPI GGNCC 1 cut(s) 655
PspPPI RGGWCCY 1 cut(s) 655
PstI CTGCAG 2 cut(s) 367, 768
PsuI RGATCY 5 cut(s) 286, 501, 1224, 1598, 1891
RsaI GTAC 2 cut(s) 143, 347
RsaNI GTAC 2 cut(s) 142, 346
SacI GAGCTC 1 cut(s) 1807
SapI GCTCTTC 1 cut(s) 1537
SaqAI TTAA 5 cut(s) 534, 1353, 1637, 1694, 1763
SatI GCNGC 8 cut(s) 119, 136, 340, 363, 366, 512, 767, 1501
Sau3AI GATC 9 cut(s) 231, 286, 501, 540, 879, 1224, 1598, 1828, 1891
Sau96I GGNCC 1 cut(s) 655
SchI GAGTC 4 cut(s) 320, 413, 974, 1355
ScrFI CCNGG 5 cut(s) 268, 311, 674, 970, 1489
SduI GDGCHC 3 cut(s) 743, 1807, 1827
SfaNI GCATC 2 cut(s) 286, 1422
SfcI CTRYAG 2 cut(s) 363, 764
SfoI GGCGCC 1 cut(s) 471
SinI GGWCC 1 cut(s) 655
SmlI CTYRAG 1 cut(s) 1762
SmoI CTYRAG 1 cut(s) 1762
SphI GCATGC 1 cut(s) 1367
SsiI CCGC 5 cut(s) 118, 340, 452, 570, 1189
SspDI GGCGCC 1 cut(s) 469
SspI AATATT 2 cut(s) 1296, 1379
SspMI CTAG 5 cut(s) 590, 756, 1028, 1044, 1781
SstI GAGCTC 1 cut(s) 1807
StyD4I CCNGG 5 cut(s) 266, 309, 672, 968, 1487
StyI CCWWGG 1 cut(s) 194
TaaI ACNGT 5 cut(s) 726, 1426, 1439, 1612, 1772
TaiI ACGT 5 cut(s) 59, 241, 816, 909, 1333
TaqI TCGA 4 cut(s) 234, 1074, 1827, 1843
TaqII GACCGA 3 cut(s) 941, 971, 1525
TauI GCSGC 2 cut(s) 121, 342
TfiI GAWTC 5 cut(s) 263, 617, 1644, 1683, 1879
Tru1I TTAA 5 cut(s) 534, 1353, 1637, 1694, 1763
Tru9I TTAA 5 cut(s) 534, 1353, 1637, 1694, 1763
TscAI CASTG 3 cut(s) 729, 1218, 1512
TseFI GTSAC 1 cut(s) 1902
TseI GCWGC 6 cut(s) 135, 362, 365, 511, 766, 1500
Tsp45I GTSAC 1 cut(s) 1902
TspDTI ATGAA 4 cut(s) 276, 695, 790, 1871
TspGWI ACGGA 1 cut(s) 159
TspRI CASTG 3 cut(s) 729, 1218, 1512
Vha464I CTTAAG 1 cut(s) 1762
VpaK11BI GGWCC 1 cut(s) 655
VspI ATTAAT 1 cut(s) 1353
XapI RAATTY 3 cut(s) 715, 1267, 1690
XbaI TCTAGA 1 cut(s) 1780
XceI RCATGY 3 cut(s) 337, 1367, 1399
XcmI CCANNNNNNNNNTGG 1 cut(s) 274
XmnI GAANNNNTTC 1 cut(s) 1546
XspI CTAG 5 cut(s) 590, 756, 1028, 1044, 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.