AT4G27430

COP1-interacting protein 7

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
13718007 .. 13723461
5455 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G27430.2

Sequence Viewer

Length: 3177 bp
ATGGATCCAAGAACAAGACTTGACTATGCTCTGTTTCAGCTCACACCAACTAGAACAAGATGTGATCTTGTGATATTCTCTGGTGGTGAGAATGAGAAACTTGCTTCTGGGATTTTTCAACCTTTCGTTACGCATCTCAAGAGCGTTAGTGATCAGATTTCTAAAGGTGGATACTCCGTTACTCTCCGTCCTTCCTCCGTTGGTGTTCCTTGGTTTACTAAAGTGACCCTTCAGAGATTTGTGCGATTTGTGACTACTCCGGAGGTTCTTGAGAGGTCTGTAACATTAGAGAAGGAGATTGAGCAGATCGAGGATTCGATTCAAGCTAATGCAGCCGCCATTGCCGGTGAAGCTGAAGGAAACGAGTTGGGTGGTACATGGACTTCTCAAAAGTCTACGGCTTTATCAAAGACGAAAGGGGAAACTGATGGAGACACTGTGGAAGAAAATTCGAAGGTTGGTCTTCAGCGTGTTCTGGAGAACCGTAAAGCGGCTTTGTGCAAAGAGCAAGCGATGGCTTATGCTCGAGCTTTGGTTGTTGGGTTTGAACTTGACTACATGGATGACCTCTTTTCGTTTGCTGATGCTTTCGGAGCTTCGCGGTTAAGGGAAGCGTGTGTTAACTTTGTGGACTTGTGCAAGAGAAAGAACGAGGATAGAATGTGGGTGGACCAAATCACTGCTATGCAAGCATTTCCTAGGCCTGAATTAACGTTCATGGGTGACTCTGGGATCGTACTCGCTGGTGAAGAGAATGATTTGTTGAATGCTACAAACGTAAAGCATGGAAACTCTATGGATGCCTCGAGCCAGGGTAGCTTTGAGACTGGCCAAGAAGGGAGAGCTCAAATGGCAATGCCGTGGCCAAACCAGTTTCCTCAGTACATGCAGAACTTTCAAGGACATGGGTATCCGCCTCCTTATATGTTTCCGGGGATGCAAGGTCAATCACCATATTTCCATGGGAATATGCAATGGCCTGTAAACATGGGAGATGTGGAGTCAAATGAGAAGTCTTCCAAGAAGAAAAAGAAGAAGAAGAAGAATAAGAAGAAGTCGAAGCAAGATGAATCTGCCGAGCCAAGCGATAATTCCAGTACTGAGACCGAATCAGAAGACGGAAATGAAGGAAAGAAACAATCCAGGAAAGTGGTTATCCGCAACATAAATTATATAACTTCAAAGAGGAATGGAGCGAAGGAGAGTGATTCAGATGAGTCTGGAGAAGAAGAAGGGTTTGTGGATGGAGATTCTATTAAGCAGCAAGTAGAAGAAGCCATTGGCTCAGTGGAGAGACGTCATAAATCGACTTCACACCGTCAGAGGAAACACAAAAGTCACAACGGTGATGATGATTCAAGTAACAAGGAAACTAAGGGGAATGATAATTGGGATGCCTTCCAGAATCTTCTTTTGAAAGACAATGATTCAGAGCCAGAAGAATTACTACGTATATCATCAACTGCGTTAAATATGGCGTCTGAAGTTGTGAGAAAGAGAGAACCGCCTTCTGATGATTCATTCTTGGTTGCAATTGGAAATGAGGATTGGGGAAGAGAAACCAGCATTGAGAAATTCAATGCAGGTGAGAATGTTCGGATAATAAGGAAAGGGAACAACTATGACGAGGAGATGTTGAATCCGGGTAGAAGCGATGAATCAAGAAGCTATTCGCAGGCAGAGATGTCGGTTCATGATGGGAAGCTCAGAACCAGAAATGAGGCGGAAGAAGACTGGTTCATACGTAACCAAGCTGGTCCAGAAACAGATCCAAGTCTTGTCAAAACATTTGTAGGAGACCATTTCCACTTAAATAAGAGCAGTGAGAGAGATGTCCTGACCGATGACTCTTTCATGATCCATTCTCGTGTTGAGAACCAAGTAGAAGATTCTCGGTTAAGGACAGAAATCATGGACTTAGACGTTTACGGAACCACCCAACAAGAAAACAGTGCCCCGGAGAACACTCCGCATGAACCAGATGACCTATACATGGTTCTTGGACGGGAACAAGATGTTAAACCTACATTGTTACCATGGACCCCTGAAATTGACTTTGAGACTAACACTTTGGCTCAAAGAACAAGCAGAATCGATTTGATAACTGCCACAAAGGCCTCTGCAGGTGAACAAACCTTAGATGGTAAAGAAAAGAAGAGTCGTGGTATCTCCAAGGGGAAGGATGCAAAGTCAAGAGCATCAAGTAGACCTGACCCGGCGTCAAAAGCCAAGAGACCTGCTTGGGGAAGTAGAGCTGCTGTCTCCAAGTCCAAATCCGAGATGGAGGAAGAGAGAAAGAAGAGAATGGAGGAACTTTTAATTCAGAGGCAAAAGAGAATTGCGGAGAAGAGTTCCGGTGGTAGTGTATCAAGTTCTTTAGCGTCCAAGAAAACTCCTACTGTGACCAAGTCAGTGAAGAGCTCGATAAAGAATGAGAAGACTCCTGAAGCCGCGCAGTCAAAGGCTAAGCCAGTACTGAGAAGTTCCACCATTGAGCGCCTTGCTGTTGCTCGGACCGCTCCAAAGGAGCCACAGCAAAAACCAGTAATCAAAAGAACATCAAAACCTTCAGGATACAAGACAGAGAAAGCTCAGGAAAAGAAATCGAGTAAAATAGGTCAATCAGATGCGAAAAGTGTGGAACTTTCTCGTGACCCGAGTCTCGAAATCAAGGAAACGGTGGTGGAAGATTCACATTCTTACTTGTCAGAGAAGCAAGTTGATGCACTTCCTGCTGTTGCTTCTGTTGATGATTTCAAAGACATTAAAGAATTGCATAGCTTGCCATCAGAAGAAACGGCCAGAGTAAAGAACAGACCGAATGAAATCATAGCAGAGAAAGTACAAGATCAGACGAAGATCGATGATCAGGAAACAGTGAAGAATACATCTGTTTCTGAAGATAAGCAAATCACCACGAAGCATTACTCAGAGGATGTTGGAGAAGTCCAGGCTTCACAGGAAAAACCGGTGTCTCCAAAGAAGTCGGTGACTTTTTCAGAGACAAACATGGAGGAGAAGTATTATTTCTCACCAGCGGTCTCAGAGATTGACATCTCAACGCCACCTGCTACTGAAGCAGATCATTCGAGGAAGAAATGGAACAGTGAAGAGACGTCTCCCAAGGCAACGGCTAAAGTCTTCAGGAAGCTTCTTATGTTCGGAAGGAAAAAGTAA

Protein Analysis

1058

Amino Acids

118.42

Weight (kDa)

5.94

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1574, 2114, 3076
AatII GACGTC 2 cut(s) 1300, 3119
Acc36I ACCTGC 4 cut(s) 1574, 2114, 2245, 3076
AccBSI CCGCTC 1 cut(s) 2519
AccI GTMKAC 2 cut(s) 395, 2206
AccII CGCG 2 cut(s) 601, 2453
AccIII TCCGGA 1 cut(s) 259
AclI AACGTT 1 cut(s) 713
AclWI GGATC 4 cut(s) 12, 740, 1763, 1852
AcoI YGGCCR 3 cut(s) 829, 863, 2799
AcsI RAATTY 2 cut(s) 448, 1574
AcuI CTGAAG 9 cut(s) 215, 375, 449, 1503, 2466, 2553, 2919, 3096, 3127
AcyI GRCGYC 4 cut(s) 1297, 1478, 2219, 3116
AfaI GTAC 6 cut(s) 376, 738, 884, 1099, 2475, 2844
AfiI CCNNNNNNNGG 3 cut(s) 490, 1993, 2243
AgeI ACCGGT 1 cut(s) 2968
AhdI GACNNNNNGTC 1 cut(s) 2218
AjnI CCWGG 3 cut(s) 810, 1142, 2949
AjuI GAANNNNNNNTTGG 6 cut(s) 1075, 1107, 1263, 1295, 1531, 1563
AleI CACNNNNGTG 1 cut(s) 1344
Alw21I GWGCWC 2 cut(s) 847, 2423
AlwI GGATC 4 cut(s) 12, 740, 1763, 1852
Ama87I CYCGRG 3 cut(s) 525, 805, 2656
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 6 cut(s) 701, 829, 863, 977, 2115, 2799
ApeKI GCWGC 3 cut(s) 332, 1261, 2255
ApoI RAATTY 2 cut(s) 448, 1574
ArsI GACNNNNNNTTYG 4 cut(s) 998, 1030, 2053, 2085
AsiGI ACCGGT 1 cut(s) 2968
Asp700I GAANNNNTTC 1 cut(s) 1669
AspA2I CCTAGG 1 cut(s) 698
AspLEI GCGC 2 cut(s) 2455, 2499
AspS9I GGNCC 4 cut(s) 670, 1757, 2040, 2514
AsuC2I CCSGG 4 cut(s) 933, 1644, 1958, 2216
AsuII TTCGAA 1 cut(s) 452
AvaI CYCGRG 3 cut(s) 525, 805, 2656
AvaII GGWCC 4 cut(s) 670, 1757, 2040, 2514
AvrII CCTAGG 1 cut(s) 698
BaeGI GKGCMC 1 cut(s) 1957
BaeI ACNNNNGTAYC 2 cut(s) 893, 926
BalI TGGCCA 2 cut(s) 831, 865
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 847, 2423
BarI GAAGNNNNNNTAC 4 cut(s) 367, 399, 1431, 1463
BauI CACGAG 2 cut(s) 1866, 2649
BbsI GAAGAC 6 cut(s) 455, 1008, 1122, 1737, 2444, 3133
Bbv12I GWGCWC 2 cut(s) 847, 2423
BbvI GCAGC 3 cut(s) 344, 1273, 2242
BccI CCATC 7 cut(s) 422, 508, 1238, 1691, 2135, 2275, 2794
BceAI ACGGC 4 cut(s) 414, 844, 2814, 3147
BcgI CGANNNNNNTGC 4 cut(s) 1668, 1702, 3069, 3103
BciT130I CCWGG 3 cut(s) 812, 1144, 2951
BciVI GTATCC 3 cut(s) 164, 921, 2567
BclI TGATCA 2 cut(s) 151, 2866
BcnI CCSGG 4 cut(s) 933, 1644, 1958, 2216
BfaI CTAG 2 cut(s) 51, 699
BfmI CTRYAG 1 cut(s) 2121
BfoI RGCGCY 1 cut(s) 2500
BfuAI ACCTGC 4 cut(s) 1574, 2114, 2245, 3076
BfuI GTATCC 3 cut(s) 164, 921, 2567
BglI GCCNNNNNGGC 1 cut(s) 2114
BisI GCNGC 6 cut(s) 333, 336, 492, 1262, 2256, 2451
BlnI CCTAGG 1 cut(s) 698
BlpI GCTNAGC 1 cut(s) 2466
BlsI GCNGC 6 cut(s) 334, 337, 493, 1263, 2257, 2452
BmcAI AGTACT 2 cut(s) 1099, 2475
Bme1390I CCNGG 7 cut(s) 812, 933, 1144, 1644, 1958, 2216, 2951
Bme18I GGWCC 4 cut(s) 670, 1757, 2040, 2514
BmeRI GACNNNNNGTC 1 cut(s) 2218
BmeT110I CYCGRG 3 cut(s) 525, 805, 2656
BmgT120I GGNCC 4 cut(s) 670, 1757, 2040, 2514
BmiI GGNNCC 4 cut(s) 6, 1933, 2042, 2529
BmrFI CCNGG 7 cut(s) 812, 933, 1144, 1644, 1958, 2216, 2951
BmsI GCATC 9 cut(s) 142, 574, 790, 927, 1384, 2173, 2207, 2617, 2713
BoxI GACNNNNGTC 1 cut(s) 2658
BpiI GAAGAC 6 cut(s) 455, 1008, 1122, 1737, 2444, 3133
BpmI CTGGAG 2 cut(s) 497, 1242
Bpu10I CCTNAGC 1 cut(s) 2592
Bpu1102I GCTNAGC 1 cut(s) 2466
Bpu14I TTCGAA 1 cut(s) 452
BpuEI CTTGAG 2 cut(s) 122, 290
BpuMI CCSGG 4 cut(s) 933, 1644, 1958, 2216
Bsa29I ATCGAT 2 cut(s) 2094, 2862
BsaAI YACGTR 2 cut(s) 1451, 1745
BsaBI GATNNNNATC 1 cut(s) 3053
BsaHI GRCGYC 4 cut(s) 1297, 1478, 2219, 3116
BsaI GGTCTC 4 cut(s) 1097, 1791, 2227, 3046
BsaWI WCCGGW 3 cut(s) 259, 2354, 2968
BsaXI ACNNNNNCTCC 4 cut(s) 423, 453, 3005, 3035
Bsc4I CCNNNNNNNGG 3 cut(s) 490, 1993, 2243
Bse118I RCCGGY 2 cut(s) 344, 2968
Bse1I ACTGG 6 cut(s) 832, 871, 1095, 1739, 2471, 2543
Bse3DI GCAATG 3 cut(s) 339, 861, 980
Bse8I GATNNNNATC 1 cut(s) 3053
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 3 cut(s) 812, 1144, 2951
BseCI ATCGAT 2 cut(s) 2094, 2862
BseGI GGATG 7 cut(s) 568, 805, 942, 1249, 1399, 2188, 2941
BseJI GATNNNNATC 1 cut(s) 3053
BseLI CCNNNNNNNGG 3 cut(s) 490, 1993, 2243
BseMI GCAATG 3 cut(s) 339, 861, 980
BseMII CTCAG 8 cut(s) 893, 1092, 1299, 1720, 2468, 2606, 2943, 3057
BseNI ACTGG 6 cut(s) 832, 871, 1095, 1739, 2471, 2543
BseRI GAGGAG 2 cut(s) 1643, 3029
BseSI GKGCMC 1 cut(s) 1957
BseXI GCAGC 3 cut(s) 344, 1273, 2242
Bsh1236I CGCG 2 cut(s) 601, 2453
BshFI GGCC 6 cut(s) 703, 831, 865, 979, 2117, 2801
BshTI ACCGGT 1 cut(s) 2968
BshVI ATCGAT 2 cut(s) 2094, 2862
BsiHKAI GWGCWC 2 cut(s) 847, 2423
BsiHKCI CYCGRG 3 cut(s) 525, 805, 2656
BsiSI CCGG 8 cut(s) 260, 345, 932, 1643, 1958, 2216, 2355, 2969
BslI CCNNNNNNNGG 3 cut(s) 490, 1993, 2243
BsmBI CGTCTC 3 cut(s) 1288, 3107, 3123
BsmI GAATGC 1 cut(s) 772
BsnI GGCC 6 cut(s) 703, 831, 865, 979, 2117, 2801
Bso31I GGTCTC 4 cut(s) 1097, 1791, 2227, 3046
BsoBI CYCGRG 3 cut(s) 525, 805, 2656
Bsp119I TTCGAA 1 cut(s) 452
Bsp1286I GDGCHC 3 cut(s) 847, 1957, 2423
Bsp13I TCCGGA 1 cut(s) 259
Bsp1720I GCTNAGC 1 cut(s) 2466
Bsp19I CCATGG 2 cut(s) 961, 2036
BspANI GGCC 6 cut(s) 703, 831, 865, 979, 2117, 2801
BspCNI CTCAG 8 cut(s) 892, 1093, 1298, 1719, 2469, 2605, 2942, 3056
BspDI ATCGAT 2 cut(s) 2094, 2862
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 2 cut(s) 601, 2453
BspHI TCATGA 2 cut(s) 1693, 1854
BspLI GGNNCC 4 cut(s) 6, 1933, 2042, 2529
BspMAI CTGCAG 1 cut(s) 2125
BspMI ACCTGC 4 cut(s) 1574, 2114, 2245, 3076
BspPI GGATC 4 cut(s) 12, 740, 1763, 1852
BspQI GCTCTTC 1 cut(s) 2411
BspT104I TTCGAA 1 cut(s) 452
BspTNI GGTCTC 4 cut(s) 1097, 1791, 2227, 3046
BsrBI CCGCTC 1 cut(s) 2519
BsrDI GCAATG 3 cut(s) 339, 861, 980
BsrFI RCCGGY 2 cut(s) 344, 2968
BsrI ACTGG 6 cut(s) 832, 871, 1095, 1739, 2471, 2543
BssAI RCCGGY 2 cut(s) 344, 2968
BssNI GRCGYC 4 cut(s) 1297, 1478, 2219, 3116
BssSI CACGAG 2 cut(s) 1866, 2649
BssT1I CCWWGG 6 cut(s) 209, 698, 961, 2036, 2172, 3123
Bst2BI CACGAG 2 cut(s) 1866, 2649
Bst2UI CCWGG 3 cut(s) 812, 1144, 2951
Bst4CI ACNGT 9 cut(s) 439, 485, 1319, 1346, 1952, 2401, 2680, 2878, 3107
Bst6I CTCTTC 8 cut(s) 744, 1549, 2150, 2283, 2294, 2342, 2411, 3105
BstACI GRCGYC 4 cut(s) 1297, 1478, 2219, 3116
BstAPI GCANNNNNTGC 2 cut(s) 2732, 2782
BstBAI YACGTR 2 cut(s) 1451, 1745
BstBI TTCGAA 1 cut(s) 452
BstC8I GCNNGC 4 cut(s) 510, 690, 1677, 2783
BstDSI CCRYGG 3 cut(s) 860, 961, 2036
BstF5I GGATG 7 cut(s) 568, 805, 942, 1249, 1399, 2188, 2941
BstFNI CGCG 2 cut(s) 601, 2453
BstH2I RGCGCY 1 cut(s) 2500
BstHHI GCGC 2 cut(s) 2455, 2499
BstNI CCWGG 3 cut(s) 812, 1144, 2951
BstNSI RCATGY 1 cut(s) 889
BstPAI GACNNNNGTC 1 cut(s) 2658
BstSCI CCNGG 7 cut(s) 810, 931, 1142, 1642, 1956, 2214, 2949
BstSFI CTRYAG 1 cut(s) 2121
BstSLI GKGCMC 1 cut(s) 1957
BstSNI TACGTA 2 cut(s) 1451, 1745
BstUI CGCG 2 cut(s) 601, 2453
BstV1I GCAGC 3 cut(s) 344, 1273, 2242
BstV2I GAAGAC 6 cut(s) 455, 1008, 1122, 1737, 2444, 3133
BstX2I RGATCY 2 cut(s) 4, 1768
BstXI CCANNNNNNTGG 1 cut(s) 1150
BstYI RGATCY 2 cut(s) 4, 1768
Bsu15I ATCGAT 2 cut(s) 2094, 2862
BsuI GTATCC 3 cut(s) 164, 921, 2567
BsuRI GGCC 6 cut(s) 703, 831, 865, 979, 2117, 2801
BsuTUI ATCGAT 2 cut(s) 2094, 2862
BtgI CCRYGG 3 cut(s) 860, 961, 2036
BtgZI GCGATG 2 cut(s) 527, 1668
BtsCI GGATG 7 cut(s) 568, 805, 942, 1249, 1399, 2188, 2941
BtsI GCAGTG 2 cut(s) 678, 1828
BtsIMutI CAGTG 8 cut(s) 435, 678, 1293, 1828, 1957, 2418, 2883, 3112
BveI ACCTGC 4 cut(s) 1574, 2114, 2245, 3076
Cac8I GCNNGC 4 cut(s) 510, 690, 1677, 2783
CciI TCATGA 2 cut(s) 1693, 1854
CfoI GCGC 2 cut(s) 2455, 2499
Cfr10I RCCGGY 2 cut(s) 344, 2968
Cfr13I GGNCC 4 cut(s) 670, 1757, 2040, 2514
ClaI ATCGAT 2 cut(s) 2094, 2862
CpoI CGGWCCG 1 cut(s) 2514
CseI GACGC 3 cut(s) 1467, 2208, 2370
Csp6I GTAC 6 cut(s) 375, 737, 883, 1098, 2474, 2843
CspAI ACCGGT 1 cut(s) 2968
CspI CGGWCCG 1 cut(s) 2514
CviQI GTAC 6 cut(s) 375, 737, 883, 1098, 2474, 2843
DriI GACNNNNNGTC 1 cut(s) 2218
EaeI YGGCCR 3 cut(s) 829, 863, 2799
Eam1104I CTCTTC 8 cut(s) 744, 1549, 2150, 2283, 2294, 2342, 2411, 3105
Eam1105I GACNNNNNGTC 1 cut(s) 2218
EarI CTCTTC 8 cut(s) 744, 1549, 2150, 2283, 2294, 2342, 2411, 3105
EciI GGCGGA 2 cut(s) 903, 1739
Ecl136II GAGCTC 2 cut(s) 845, 2421
Eco105I TACGTA 2 cut(s) 1451, 1745
Eco130I CCWWGG 6 cut(s) 209, 698, 961, 2036, 2172, 3123
Eco147I AGGCCT 2 cut(s) 703, 2117
Eco24I GRGCYC 2 cut(s) 847, 2423
Eco31I GGTCTC 4 cut(s) 1097, 1791, 2227, 3046
Eco47I GGWCC 4 cut(s) 670, 1757, 2040, 2514
Eco53kI GAGCTC 2 cut(s) 845, 2421
Eco57I CTGAAG 9 cut(s) 215, 375, 449, 1503, 2466, 2553, 2919, 3096, 3127
Eco88I CYCGRG 3 cut(s) 525, 805, 2656
EcoICRI GAGCTC 2 cut(s) 845, 2421
EcoRII CCWGG 3 cut(s) 810, 1142, 2949
EcoT14I CCWWGG 6 cut(s) 209, 698, 961, 2036, 2172, 3123
EcoT38I GRGCYC 2 cut(s) 847, 2423
ErhI CCWWGG 6 cut(s) 209, 698, 961, 2036, 2172, 3123
Esp3I CGTCTC 3 cut(s) 1288, 3107, 3123
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FbaI TGATCA 2 cut(s) 151, 2866
FblI GTMKAC 2 cut(s) 395, 2206
Fnu4HI GCNGC 6 cut(s) 333, 336, 492, 1262, 2256, 2451
FokI GGATG 7 cut(s) 575, 812, 949, 1256, 1406, 2195, 2948
FriOI GRGCYC 2 cut(s) 847, 2423
Fsp4HI GCNGC 6 cut(s) 333, 336, 492, 1262, 2256, 2451
FspBI CTAG 2 cut(s) 51, 699
GlaI GCGC 2 cut(s) 2454, 2498
GluI GCNGC 6 cut(s) 333, 336, 492, 1262, 2256, 2451
GsuI CTGGAG 2 cut(s) 497, 1242
HaeII RGCGCY 1 cut(s) 2500
HaeIII GGCC 6 cut(s) 703, 831, 865, 979, 2117, 2801
HapII CCGG 8 cut(s) 260, 345, 932, 1643, 1958, 2216, 2355, 2969
HgaI GACGC 3 cut(s) 1467, 2208, 2370
HhaI GCGC 2 cut(s) 2455, 2499
Hin1I GRCGYC 4 cut(s) 1297, 1478, 2219, 3116
Hin6I GCGC 2 cut(s) 2453, 2497
HinP1I GCGC 2 cut(s) 2453, 2497
HincII GTYRAC 1 cut(s) 622
HindII GTYRAC 1 cut(s) 622
HindIII AAGCTT 1 cut(s) 3149
HpaI GTTAAC 1 cut(s) 622
HpaII CCGG 8 cut(s) 260, 345, 932, 1643, 1958, 2216, 2355, 2969
Hpy166II GTNNAC 9 cut(s) 216, 396, 622, 631, 670, 985, 1927, 2129, 2207
Hpy8I GTNNAC 9 cut(s) 216, 396, 622, 631, 670, 985, 1927, 2129, 2207
HpyCH4III ACNGT 9 cut(s) 439, 485, 1319, 1346, 1952, 2401, 2680, 2878, 3107
HpyCH4IV ACGT 7 cut(s) 713, 777, 1297, 1450, 1744, 1923, 3116
HpySE526I ACGT 7 cut(s) 713, 777, 1297, 1450, 1744, 1923, 3116
Hsp92I GRCGYC 4 cut(s) 1297, 1478, 2219, 3116
HspAI GCGC 2 cut(s) 2453, 2497
Kpn2I TCCGGA 1 cut(s) 259
Ksp22I TGATCA 2 cut(s) 151, 2866
KspAI GTTAAC 1 cut(s) 622
LguI GCTCTTC 1 cut(s) 2411
LmnI GCTCC 4 cut(s) 593, 1193, 2524, 2527
Lsp1109I GCAGC 3 cut(s) 344, 1273, 2242
LweI GCATC 9 cut(s) 142, 574, 790, 927, 1384, 2173, 2207, 2617, 2713
MaeI CTAG 2 cut(s) 51, 699
MaeII ACGT 7 cut(s) 713, 777, 1297, 1450, 1744, 1923, 3116
MbiI CCGCTC 1 cut(s) 2519
MfeI CAATTG 1 cut(s) 1533
MflI RGATCY 2 cut(s) 4, 1768
MhlI GDGCHC 3 cut(s) 847, 1957, 2423
MlsI TGGCCA 2 cut(s) 831, 865
MluNI TGGCCA 2 cut(s) 831, 865
MlyI GAGTC 7 cut(s) 719, 1010, 1226, 1841, 2167, 2434, 2668
MmeI TCCRAC 1 cut(s) 2920
Mox20I TGGCCA 2 cut(s) 831, 865
MroI TCCGGA 1 cut(s) 259
MroXI GAANNNNTTC 1 cut(s) 1669
MscI TGGCCA 2 cut(s) 831, 865
MslI CAYNNNNRTG 3 cut(s) 683, 1344, 1866
Msp20I TGGCCA 2 cut(s) 831, 865
MspA1I CMGCKG 1 cut(s) 3038
MspI CCGG 8 cut(s) 260, 345, 932, 1643, 1958, 2216, 2355, 2969
MspR9I CCNGG 7 cut(s) 812, 933, 1144, 1644, 1958, 2216, 2951
MunI CAATTG 1 cut(s) 1533
Mva1269I GAATGC 1 cut(s) 772
MvaI CCWGG 3 cut(s) 812, 1144, 2951
MvnI CGCG 2 cut(s) 601, 2453
NciI CCSGG 4 cut(s) 933, 1644, 1958, 2216
NcoI CCATGG 2 cut(s) 961, 2036
NlaIV GGNNCC 4 cut(s) 6, 1933, 2042, 2529
NmeAIII GCCGAG 1 cut(s) 1102
NmuCI GTSAC 7 cut(s) 223, 250, 722, 1337, 2401, 2651, 2989
NspI RCATGY 1 cut(s) 889
NspV TTCGAA 1 cut(s) 452
OliI CACNNNNGTG 1 cut(s) 1344
PaeR7I CTCGAG 2 cut(s) 525, 805
PagI TCATGA 2 cut(s) 1693, 1854
PaqCI CACCTGC 3 cut(s) 1574, 2114, 3076
PceI AGGCCT 2 cut(s) 703, 2117
PciSI GCTCTTC 1 cut(s) 2411
PctI GAATGC 1 cut(s) 772
PdmI GAANNNNTTC 1 cut(s) 1669
PflFI GACNNNGTC 1 cut(s) 2407
PfoI TCCNGGA 1 cut(s) 1142
PinAI ACCGGT 1 cut(s) 2968
PkrI GCNGC 6 cut(s) 334, 337, 493, 1263, 2257, 2452
PleI GAGTC 7 cut(s) 719, 1009, 1225, 1841, 2166, 2434, 2667
PpsI GAGTC 7 cut(s) 719, 1009, 1225, 1841, 2166, 2434, 2667
Ppu21I YACGTR 2 cut(s) 1451, 1745
PshAI GACNNNNGTC 1 cut(s) 2658
Psp124BI GAGCTC 2 cut(s) 847, 2423
Psp1406I AACGTT 1 cut(s) 713
Psp6I CCWGG 3 cut(s) 810, 1142, 2949
PspGI CCWGG 3 cut(s) 810, 1142, 2949
PspN4I GGNNCC 4 cut(s) 6, 1933, 2042, 2529
PspPI GGNCC 4 cut(s) 670, 1757, 2040, 2514
PspXI VCTCGAGB 2 cut(s) 525, 805
PstI CTGCAG 1 cut(s) 2125
PsuI RGATCY 2 cut(s) 4, 1768
PsyI GACNNNGTC 1 cut(s) 2407
RsaI GTAC 6 cut(s) 376, 738, 884, 1099, 2475, 2844
RsaNI GTAC 6 cut(s) 375, 737, 883, 1098, 2474, 2843
RseI CAYNNNNRTG 3 cut(s) 683, 1344, 1866
Rsr2I CGGWCCG 1 cut(s) 2514
RsrII CGGWCCG 1 cut(s) 2514
SacI GAGCTC 2 cut(s) 847, 2423
SapI GCTCTTC 1 cut(s) 2411
SatI GCNGC 6 cut(s) 333, 336, 492, 1262, 2256, 2451
Sau96I GGNCC 4 cut(s) 670, 1757, 2040, 2514
ScaI AGTACT 2 cut(s) 1099, 2475
SchI GAGTC 7 cut(s) 719, 1010, 1226, 1841, 2167, 2434, 2668
ScrFI CCNGG 7 cut(s) 812, 933, 1144, 1644, 1958, 2216, 2951
SduI GDGCHC 3 cut(s) 847, 1957, 2423
SfaNI GCATC 9 cut(s) 142, 574, 790, 927, 1384, 2173, 2207, 2617, 2713
SfcI CTRYAG 1 cut(s) 2121
Sfr274I CTCGAG 2 cut(s) 525, 805
SfuI TTCGAA 1 cut(s) 452
SinI GGWCC 4 cut(s) 670, 1757, 2040, 2514
SlaI CTCGAG 2 cut(s) 525, 805
SmiMI CAYNNNNRTG 3 cut(s) 683, 1344, 1866
SmlI CTYRAG 4 cut(s) 137, 269, 525, 805
SmoI CTYRAG 4 cut(s) 137, 269, 525, 805
SnaBI TACGTA 2 cut(s) 1451, 1745
SseBI AGGCCT 2 cut(s) 703, 2117
SspMI CTAG 2 cut(s) 51, 699
SstI GAGCTC 2 cut(s) 847, 2423
StuI AGGCCT 2 cut(s) 703, 2117
StyD4I CCNGG 7 cut(s) 810, 931, 1142, 1642, 1956, 2214, 2949
StyI CCWWGG 6 cut(s) 209, 698, 961, 2036, 2172, 3123
TaaI ACNGT 9 cut(s) 439, 485, 1319, 1346, 1952, 2401, 2680, 2878, 3107
TaiI ACGT 7 cut(s) 716, 780, 1300, 1453, 1747, 1926, 3119
TaqII GACCGA 3 cut(s) 1121, 1856, 2833
TatI WGTACW 4 cut(s) 882, 1097, 2473, 2842
TauI GCSGC 3 cut(s) 338, 494, 2453
TscAI CASTG 8 cut(s) 442, 685, 1293, 1828, 1957, 2418, 2883, 3112
TseFI GTSAC 7 cut(s) 223, 250, 722, 1337, 2401, 2651, 2989
TseI GCWGC 3 cut(s) 332, 1261, 2255
Tsp45I GTSAC 7 cut(s) 223, 250, 722, 1337, 2401, 2651, 2989
TspGWI ACGGA 5 cut(s) 166, 176, 187, 1134, 1944
TspRI CASTG 8 cut(s) 442, 685, 1293, 1828, 1957, 2418, 2883, 3112
Tth111I GACNNNGTC 1 cut(s) 2407
VpaK11BI GGWCC 4 cut(s) 670, 1757, 2040, 2514
XapI RAATTY 2 cut(s) 448, 1574
XceI RCATGY 1 cut(s) 889
XcmI CCANNNNNNNNNTGG 2 cut(s) 1285, 2278
XhoI CTCGAG 2 cut(s) 525, 805
XmaJI CCTAGG 1 cut(s) 698
XmiI GTMKAC 2 cut(s) 395, 2206
XmnI GAANNNNTTC 1 cut(s) 1669
XspI CTAG 2 cut(s) 51, 699
ZraI GACGTC 2 cut(s) 1298, 3117
ZrmI AGTACT 2 cut(s) 1099, 2475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.