Prupe.4G186100_v2.0.a1

COP1-interacting protein 7

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
11044507 .. 11052321
7815 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G186100.2

Sequence Viewer

Length: 3696 bp
ATGGATTCTAGGACTCGTCTTGATCATGCTCTGTTCCAACTCACTCCAACCAGAACAAGATGTGAATTGGTGATATTTGCTGCTGCTGGTGGAAGCGAGAAATTGGCTTCAGGGCTTCTAGAACCATTTCTTGTACACTTGAAATGCGCCAAGGATCAGATTTCCAAAGGAGGCTACTCCATTATTCTTCGTCCTCCGGGCTCAGGTGCCTCCTGGTTCACCAAAGCCACTTTGCAAAGGTTTGTGAAGTTTGTTACCACACCAGAAGCTCTTGAAAGATTTGTGACTATTGAGAGGGAGATTTTGCAAATTGAGAATTCGATTCAATCGAACGAATTGACAGAGGCAGAAGCTGATGGGAATCACAATAAGTCAATTGCATTGAAGTCAAACAGTGAATCCAATGTAACCATTGATGCTGTGCCAGAAGAGAATTCCAAGATTCGTCTCCAACGTGTTTTGGAAACCCGGAAGGTAGTACTATGCAAAGAACAAGCGATGGCTTATGCTCGTGCTTTAGTAGCTGGATTTGAACTGGACTATATAGATGATCTTATATCTTTCTCTGATACTTTTGGAGCTTCACGTTTAAGGGAAGCATGCATTAATTTCATAAATCTATACAAACAAAAGAATGAAGATAGGCTTTGGATGGAAGAAATAGCAGCAATGCAGGCATGCGCTCACCCAGAACTGCCATACTTGGGAACATCAGGAATCATTCTTGCTGGAGAAGATAATGACCCCAGTCAGAATCTCATGATAAATGTTAACCATAGTACTCTCTCTGTTGGGAAAAATGGCTCACTAGACACATCAGTGTCTGAGTCAACAAGTCATGGAAGTCTGGATGTGAACCAAGATAATAGCTTGCCAGCATCGGGTAAGATGTCATCAACGGATGGGAAAGCTCAAGTACCAAACCCATGGCCAAACCATCTTCCCCAGTACATGCACAATTTTCAAGGTCCTGTATATCCACAAATGCACCCCTATCAAGGTTACATTTTTCCTGGTATGCAGGTTCCACCATATTATCCAGGGAATATGAAATGGCCTCCAAATGGGGAAGAATCTGGCCCTACTTTTGATCAGGAATCCGATGGTCGTAGGAATCATAAATCTCATAGGAATAAAAAGAAACATTCTCATGGAAAAGTGCTGGAAACGTCAGAGCAAGATGGATCCGATCAGAGCACTGGCTCTAGTTATGAGAGTGAATCTGATGATCCTATGGAACATGGAAAAAAGTACTCTGGAACAGAGCAGGTGCATAGGAAAAAGCATGGGAGGAAGTCCTCGAGAAAGGTTGTTATCCGTAATATCAATTACATAACCTCTAAAAGGGATGGAGAAACAGGCAGTGTGTCTGAGGGAAATTCATCTGATGAGGATGAGTTCATTGATGGCAAATCCATTAAACAGCAGGTGGAGGAAGCTGTTGGGTCATTGGGGAAGAAACATAGGTCAACCTCACATCATCAAAGAAAACAAGATGGGAGCAAGTTTCCAGGCAACGTAGATGATTCAAATGGTGCTGCTGATCAGGAAATTAAAAATGGAGTTGCAAATAATTACAAGGGAGAAAAACAAAATGACAACTGGAATGCTTTTCAGGACCTTCTCATGAGGGACAAGGATTCAAGTTCTTTTGATATGGAACCACACAATATACAGGTTGAGGAAGAATATTTTTCAAGTAAGAACTCTGGTGAAGGAAGGTCATTTGCATTTAACCAGGAACAGACGAAAGTGACTAAGCAACAAGCAGATTCAAGTGATTTTTTTGTGGTGACAGAGAGGGATCCAGGTAATGAGAGTAAAACGCACGTCCGGTACTTTGAAGGTGACGAGAATGCTGCTCGGATTACCAAGAGAACTGATAACACATATGAGGATGTATTATTTTCACGGAGAATTGAAGAATCGGGGAACAATTCCCATGATACTGTATCTGGTTGTGCCAATGAATCTTACACAACCAAATGTCCTAATGAAGGGGATTGGTTCATCAGCAACCAAACAGATATATCAGCAAATCAGGATGCCAGCAATGATCTGAAACTTTTTGATGGTGTTTATGCTTCATCAAAGTTAGCAACTGACAGTATTCATGCTGAGAAAAATAAGAGAGATGTTCTTGTGGATGACTCTTTCATGGTTCGAGACCAATCAGTGGTTGATCAATCAGATTCTCAGTTCAGGACAGATATAAGCATCGTTCCAGATATTATTGGAGCTACTCAATATGAATATGGCATGGAGGAAATTTCAAATGATAAACCTGAGGCCTTTAGCACCCATGAACCAGATGACCTTTACATGATGCTTGACCGTGGTTCAGCTGTGGAGCATGCTGTGGCACCATGGACTCCCGAAATGGATTATGAGAATAATGTGTCATCATTTGAGGCCACTAAAAAGAATCCTGGCACTGAAATGACTGATTGTGTTGAAGTTAAGAAACCTTCTAATAGTAAGAGAAGGAATGATAAAAATAGTGGAAGTCCTGGAGATAAAGTTCAATCCAAAGAAGCAAGGCCTAAAGTTGTAAATGGATCTTTGGGGAAGAGCAAATCTGATATCATGTCAAGAAGCACAAGACCTACTTCTGTAAGCAAAAGCACAGTCCCGAAGAGCAAATTTGAAAAGGAAGAAGAACAGAGAAAGAGAATGGAGGAGTTACGAATTCAACGCCAGAAGAGAATTGCTGAAAGGAGTGGTTCTAATACAGCAACGTCTAAGAAGGCCCCAGTGGAAAACAAAACTGCCATGACTAACACGAAGAGTGAGAAGCTTAAAACTCAATCCTCAATCCAAGAGACTAAGAAATCAGATAAGCCTGTCCTCCGGAGTTCCACCCTTGAACGCCTTGCAACTGCTCGGGTAACTGAAAAGCTGTCAACCGCGGGGGTGAATTCTGGCCAACCCAAAAAACAAAACATTAAAGCAAATGGTGTAGTTGCAACTGCCTCGTCGCAGAAGGCAGCTGGTGCTATGAATAAGAAACCAAGTCCAAACAAAACCAAACCTTCAGATGTGAAAGACGACCTGAAGAATTTAAATCCATTAATTTCGTCTGACTCTTATGTCCAGGAAAAGGTTTGCATAGAAGCTACAGAAGCACTGCCAATTGAGTCATCAGCTGCACCTGCAACTCAACCCGCTAGTTCCATCAATCATTTGGAAGAGACTAAGGAACTCCATGGTACATCTTCTGTTGAAAAGAGTGAAGGAAATCTGACGTTACAAAGAGAGGCCTTGGAGAACGGAAGCTGCAATGGGTATTCTCCCAATTTGCGTCTTTCTGTGCCTTTTGAAGTGAACTCCGCAAAACTGGATCAGTTTACAGGTGATGCTGAAGAGTTGCCTCAGGAATTTCCAGTTCTTAGTGAAGACAAAAGAAATTATCTTCCTGAAATGAGTGTGTATCCTCCTATTCCAAGATCACCTAACAAAACTTCAATTGTTTCCGCCGTGAACATTGAAGAAAATGGTCCAATAACTAAGAACTTACCAATCTCTTCTGAGATTTCTGAGATAGAAATCTCTACTCCACCAAGTGATGAAACACTCAGAGAACAACTCCACTCCAGGAAGAAATGGAACAGTGATGAAACCTCTCCTAAAGCTGCCAAAGGGTTTAAGAAGCTTCTATTGTTTGGGCGGAAAAGCCGAAACTCTCCTGTCAATTGA

Protein Analysis

1232

Amino Acids

136.61

Weight (kDa)

5.86

Isoelectric Point (pI)

51.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1258, 1417, 3160
AasI GACNNNNNNGTC 1 cut(s) 3089
Acc36I ACCTGC 4 cut(s) 1012, 1258, 1417, 3160
AccB1I GGYRCC 2 cut(s) 206, 2362
AccB7I CCANNNNNTGG 1 cut(s) 2176
AccII CGCG 1 cut(s) 2909
AccIII TCCGGA 1 cut(s) 2850
AciI CCGC 6 cut(s) 2907, 2909, 3165, 3330, 3474, 3667
AclWI GGATC 8 cut(s) 162, 1179, 1192, 1223, 1799, 1812, 2566, 3348
AcoI YGGCCR 2 cut(s) 929, 2923
AcsI RAATTY 9 cut(s) 316, 433, 1378, 2268, 2642, 2688, 2917, 3058, 3377
AcuI CTGAAG 4 cut(s) 93, 3018, 3074, 3381
AdeI CACNNNGTG 1 cut(s) 3563
AfaI GTAC 8 cut(s) 135, 480, 781, 918, 950, 1253, 1838, 3211
AfiI CCNNNNNNNGG 9 cut(s) 203, 704, 881, 998, 1064, 1344, 1997, 2176, 3100
AflIII ACRYGT 1 cut(s) 454
AjiI CACGTC 1 cut(s) 1831
AleI CACNNNNGTG 1 cut(s) 818
AloI GAACNNNNNNTCC 2 cut(s) 2505, 2537
Alw21I GWGCWC 1 cut(s) 1199
Alw26I GTCTC 4 cut(s) 452, 2160, 2816, 3185
AlwI GGATC 8 cut(s) 162, 1179, 1192, 1223, 1799, 1812, 2566, 3348
AlwNI CAGNNNCTG 2 cut(s) 353, 824
Ama87I CYCGRG 2 cut(s) 1300, 2883
Aor13HI TCCGGA 1 cut(s) 2850
AoxI GGCC 9 cut(s) 929, 1055, 1078, 2289, 2412, 2540, 2748, 2923, 3258
ApeKI GCWGC 9 cut(s) 80, 83, 665, 1538, 1859, 2987, 3146, 3276, 3632
ApoI RAATTY 9 cut(s) 316, 433, 1378, 2268, 2642, 2688, 2917, 3058, 3377
ArsI GACNNNNNNTTYG 2 cut(s) 2613, 2645
AseI ATTAAT 2 cut(s) 606, 3071
Asp700I GAANNNNTTC 1 cut(s) 126
AspLEI GCGC 2 cut(s) 149, 683
AspS9I GGNCC 5 cut(s) 968, 1079, 1618, 2749, 3497
AsuC2I CCSGG 2 cut(s) 198, 469
AsuHPI GGTGA 9 cut(s) 82, 211, 677, 1724, 1804, 1859, 2926, 3365, 3441
AvaI CYCGRG 2 cut(s) 1300, 2883
AvaII GGWCC 3 cut(s) 968, 1618, 3497
AxyI CCTNAGG 2 cut(s) 2286, 3372
BalI TGGCCA 2 cut(s) 931, 2925
BamHI GGATCC 2 cut(s) 1184, 1804
BanI GGYRCC 2 cut(s) 206, 2362
BanII GRGCYC 1 cut(s) 203
BauI CACGAG 1 cut(s) 510
BbsI GAAGAC 1 cut(s) 3402
Bbv12I GWGCWC 1 cut(s) 1199
BbvI GCAGC 9 cut(s) 67, 70, 677, 1525, 1846, 2999, 3133, 3263, 3619
BceAI ACGGC 1 cut(s) 3461
BcgI CGANNNNNNTGC 4 cut(s) 1841, 1875, 2955, 2989
BciVI GTATCC 1 cut(s) 3441
BclI TGATCA 4 cut(s) 22, 1090, 1543, 2182
BcnI CCSGG 2 cut(s) 198, 469
BcoDI GTCTC 4 cut(s) 452, 2160, 2816, 3185
BfaI CTAG 5 cut(s) 9, 119, 809, 1206, 3168
BfmI CTRYAG 1 cut(s) 3117
BfuAI ACCTGC 4 cut(s) 1012, 1258, 1417, 3160
BfuI GTATCC 1 cut(s) 3441
BisI GCNGC 9 cut(s) 81, 84, 666, 1539, 1860, 2988, 3147, 3277, 3633
BlsI GCNGC 9 cut(s) 82, 85, 667, 1540, 1861, 2989, 3148, 3278, 3634
BmcAI AGTACT 3 cut(s) 480, 781, 1253
Bme18I GGWCC 3 cut(s) 968, 1618, 3497
BmeT110I CYCGRG 2 cut(s) 1300, 2883
BmgBI CACGTC 1 cut(s) 1831
BmgT120I GGNCC 5 cut(s) 968, 1079, 1618, 2749, 3497
BmiI GGNNCC 7 cut(s) 208, 1026, 1186, 1662, 1806, 2364, 2751
BmrI ACTGGG 3 cut(s) 741, 940, 2747
BmsI GCATC 6 cut(s) 406, 887, 2035, 2226, 2316, 3346
BmuI ACTGGG 3 cut(s) 741, 940, 2747
BoxI GACNNNNGTC 1 cut(s) 747
BpiI GAAGAC 1 cut(s) 3402
BplI GAGNNNNNCTC 2 cut(s) 3570, 3602
BpmI CTGGAG 3 cut(s) 750, 2532, 3577
Bpu10I CCTNAGC 1 cut(s) 202
BpuEI CTTGAG 1 cut(s) 897
BpuMI CCSGG 2 cut(s) 198, 469
BsaBI GATNNNNATC 2 cut(s) 360, 3545
BsaI GGTCTC 1 cut(s) 2160
BsaJI CCNNGG 8 cut(s) 150, 926, 1040, 2335, 2366, 2907, 3205, 3261
BsaWI WCCGGW 2 cut(s) 1833, 2850
BsaXI ACNNNNNCTCC 2 cut(s) 2505, 2535
Bsc4I CCNNNNNNNGG 9 cut(s) 203, 704, 881, 998, 1064, 1344, 1997, 2176, 3100
Bse1I ACTGG 8 cut(s) 540, 747, 946, 1204, 1607, 2753, 3342, 3383
Bse21I CCTNAGG 2 cut(s) 2286, 3372
Bse3DI GCAATG 3 cut(s) 675, 2059, 3286
Bse8I GATNNNNATC 2 cut(s) 360, 3545
BseAI TCCGGA 1 cut(s) 2850
BseDI CCNNGG 8 cut(s) 150, 926, 1040, 2335, 2366, 2907, 3205, 3261
BseGI GGATG 8 cut(s) 657, 856, 907, 1354, 1399, 1903, 2050, 2152
BseJI GATNNNNATC 2 cut(s) 360, 3545
BseLI CCNNNNNNNGG 9 cut(s) 203, 704, 881, 998, 1064, 1344, 1997, 2176, 3100
BseMI GCAATG 3 cut(s) 675, 2059, 3286
BseNI ACTGG 8 cut(s) 540, 747, 946, 1204, 1607, 2753, 3342, 3383
BseRI GAGGAG 1 cut(s) 2693
BseXI GCAGC 9 cut(s) 67, 70, 677, 1525, 1846, 2999, 3133, 3263, 3619
BsgI GTGCAG 1 cut(s) 3132
Bsh1236I CGCG 1 cut(s) 2909
BshFI GGCC 9 cut(s) 931, 1057, 1080, 2291, 2414, 2542, 2750, 2925, 3260
BshNI GGYRCC 2 cut(s) 206, 2362
BsiHKAI GWGCWC 1 cut(s) 1199
BsiHKCI CYCGRG 2 cut(s) 1300, 2883
BsiSI CCGG 4 cut(s) 197, 469, 1834, 2851
BslFI GGGAC 2 cut(s) 1646, 2615
BslI CCNNNNNNNGG 9 cut(s) 203, 704, 881, 998, 1064, 1344, 1997, 2176, 3100
BsmAI GTCTC 4 cut(s) 452, 2160, 2816, 3185
BsmBI CGTCTC 1 cut(s) 452
BsmFI GGGAC 2 cut(s) 1646, 2615
BsmI GAATGC 2 cut(s) 1612, 1861
BsnI GGCC 9 cut(s) 931, 1057, 1080, 2291, 2414, 2542, 2750, 2925, 3260
Bso31I GGTCTC 1 cut(s) 2160
BsoBI CYCGRG 2 cut(s) 1300, 2883
Bsp1286I GDGCHC 2 cut(s) 203, 1199
Bsp13I TCCGGA 1 cut(s) 2850
Bsp1407I TGTACA 1 cut(s) 133
Bsp19I CCATGG 3 cut(s) 926, 2366, 3205
BspACI CCGC 6 cut(s) 2907, 2909, 3165, 3330, 3474, 3667
BspANI GGCC 9 cut(s) 931, 1057, 1080, 2291, 2414, 2542, 2750, 2925, 3260
BspEI TCCGGA 1 cut(s) 2850
BspFNI CGCG 1 cut(s) 2909
BspHI TCATGA 2 cut(s) 759, 1626
BspLI GGNNCC 7 cut(s) 208, 1026, 1186, 1662, 1806, 2364, 2751
BspMI ACCTGC 4 cut(s) 1012, 1258, 1417, 3160
BspPI GGATC 8 cut(s) 162, 1179, 1192, 1223, 1799, 1812, 2566, 3348
BspQI GCTCTTC 2 cut(s) 2564, 2630
BspT107I GGYRCC 2 cut(s) 206, 2362
BspTNI GGTCTC 1 cut(s) 2160
BsrDI GCAATG 3 cut(s) 675, 2059, 3286
BsrGI TGTACA 1 cut(s) 133
BsrI ACTGG 8 cut(s) 540, 747, 946, 1204, 1607, 2753, 3342, 3383
BssECI CCNNGG 8 cut(s) 150, 926, 1040, 2335, 2366, 2907, 3205, 3261
BssSI CACGAG 1 cut(s) 510
BssT1I CCWWGG 5 cut(s) 150, 926, 2366, 3205, 3261
Bst2BI CACGAG 1 cut(s) 510
Bst4CI ACNGT 6 cut(s) 395, 1951, 2108, 2336, 2629, 3611
Bst6I CTCTTC 8 cut(s) 423, 2564, 2630, 2696, 2780, 3183, 3357, 3529
BstAPI GCANNNNNTGC 1 cut(s) 2993
BstAUI TGTACA 1 cut(s) 133
BstC8I GCNNGC 7 cut(s) 601, 675, 679, 872, 876, 2050, 2355
BstDSI CCRYGG 5 cut(s) 926, 2335, 2366, 2907, 3205
BstENI CCTNNNNNAGG 2 cut(s) 1342, 1995
BstF5I GGATG 8 cut(s) 657, 856, 907, 1354, 1399, 1903, 2050, 2152
BstFNI CGCG 1 cut(s) 2909
BstHHI GCGC 2 cut(s) 149, 683
BstMAI GTCTC 4 cut(s) 452, 2160, 2816, 3185
BstMWI GCNNNNNNNGC 5 cut(s) 521, 674, 2993, 3122, 3152
BstNSI RCATGY 4 cut(s) 603, 681, 955, 2357
BstPAI GACNNNNGTC 1 cut(s) 747
BstSFI CTRYAG 1 cut(s) 3117
BstUI CGCG 1 cut(s) 2909
BstV1I GCAGC 9 cut(s) 67, 70, 677, 1525, 1846, 2999, 3133, 3263, 3619
BstV2I GAAGAC 1 cut(s) 3402
BstX2I RGATCY 3 cut(s) 1184, 1804, 2558
BstXI CCANNNNNNTGG 1 cut(s) 927
BstYI RGATCY 3 cut(s) 1184, 1804, 2558
Bsu36I CCTNAGG 2 cut(s) 2286, 3372
BsuI GTATCC 1 cut(s) 3441
BsuRI GGCC 9 cut(s) 931, 1057, 1080, 2291, 2414, 2542, 2750, 2925, 3260
BtgI CCRYGG 5 cut(s) 926, 2335, 2366, 2907, 3205
BtgZI GCGATG 1 cut(s) 512
BtrI CACGTC 1 cut(s) 1831
BtsCI GGATG 8 cut(s) 657, 856, 907, 1354, 1399, 1903, 2050, 2152
BtsI GCAGTG 2 cut(s) 1369, 3125
BtsIMutI CAGTG 9 cut(s) 400, 825, 1197, 1369, 2181, 2433, 2760, 3125, 3616
BveI ACCTGC 4 cut(s) 1012, 1258, 1417, 3160
Cac8I GCNNGC 7 cut(s) 601, 675, 679, 872, 876, 2050, 2355
CaiI CAGNNNCTG 2 cut(s) 353, 824
CciI TCATGA 2 cut(s) 759, 1626
CfoI GCGC 2 cut(s) 149, 683
Cfr13I GGNCC 5 cut(s) 968, 1079, 1618, 2749, 3497
Cfr42I CCGCGG 1 cut(s) 2910
CseI GACGC 1 cut(s) 3290
Csp6I GTAC 8 cut(s) 134, 479, 780, 917, 949, 1252, 1837, 3210
CviQI GTAC 8 cut(s) 134, 479, 780, 917, 949, 1252, 1837, 3210
DraI TTTAAA 1 cut(s) 3063
DraIII CACNNNGTG 1 cut(s) 3563
DrdI GACNNNNNNGTC 1 cut(s) 3089
DseDI GACNNNNNNGTC 1 cut(s) 3089
EaeI YGGCCR 2 cut(s) 929, 2923
Eam1104I CTCTTC 8 cut(s) 423, 2564, 2630, 2696, 2780, 3183, 3357, 3529
EarI CTCTTC 8 cut(s) 423, 2564, 2630, 2696, 2780, 3183, 3357, 3529
EciI GGCGGA 2 cut(s) 3463, 3682
Eco130I CCWWGG 5 cut(s) 150, 926, 2366, 3205, 3261
Eco147I AGGCCT 3 cut(s) 2291, 2542, 3260
Eco24I GRGCYC 1 cut(s) 203
Eco31I GGTCTC 1 cut(s) 2160
Eco32I GATATC 1 cut(s) 2584
Eco47I GGWCC 3 cut(s) 968, 1618, 3497
Eco57I CTGAAG 4 cut(s) 93, 3018, 3074, 3381
Eco81I CCTNAGG 2 cut(s) 2286, 3372
Eco88I CYCGRG 2 cut(s) 1300, 2883
EcoNI CCTNNNNNAGG 2 cut(s) 1342, 1995
EcoO109I RGGNCCY 3 cut(s) 968, 1618, 2749
EcoRI GAATTC 4 cut(s) 316, 433, 2688, 2917
EcoRV GATATC 1 cut(s) 2584
EcoT14I CCWWGG 5 cut(s) 150, 926, 2366, 3205, 3261
EcoT22I ATGCAT 1 cut(s) 605
EcoT38I GRGCYC 1 cut(s) 203
ErhI CCWWGG 5 cut(s) 150, 926, 2366, 3205, 3261
Esp3I CGTCTC 1 cut(s) 452
FalI AAGNNNNNCTT 4 cut(s) 630, 662, 2593, 2625
FaqI GGGAC 2 cut(s) 1646, 2615
FauI CCCGC 2 cut(s) 2902, 3172
FauNDI CATATG 1 cut(s) 1891
FbaI TGATCA 4 cut(s) 22, 1090, 1543, 2182
Fnu4HI GCNGC 9 cut(s) 81, 84, 666, 1539, 1860, 2988, 3147, 3277, 3633
FokI GGATG 8 cut(s) 664, 863, 914, 1361, 1406, 1910, 2057, 2159
FriOI GRGCYC 1 cut(s) 203
Fsp4HI GCNGC 9 cut(s) 81, 84, 666, 1539, 1860, 2988, 3147, 3277, 3633
FspBI CTAG 5 cut(s) 9, 119, 809, 1206, 3168
GlaI GCGC 2 cut(s) 148, 682
GluI GCNGC 9 cut(s) 81, 84, 666, 1539, 1860, 2988, 3147, 3277, 3633
GsuI CTGGAG 3 cut(s) 750, 2532, 3577
HaeIII GGCC 9 cut(s) 931, 1057, 1080, 2291, 2414, 2542, 2750, 2925, 3260
HapII CCGG 4 cut(s) 197, 469, 1834, 2851
HgaI GACGC 1 cut(s) 3290
HhaI GCGC 2 cut(s) 149, 683
Hin6I GCGC 2 cut(s) 147, 681
HinP1I GCGC 2 cut(s) 147, 681
HincII GTYRAC 4 cut(s) 772, 831, 1470, 2904
HindII GTYRAC 4 cut(s) 772, 831, 1470, 2904
HindIII AAGCTT 2 cut(s) 2795, 3650
HpaI GTTAAC 1 cut(s) 772
HpaII CCGG 4 cut(s) 197, 469, 1834, 2851
HphI GGTGA 9 cut(s) 82, 211, 677, 1724, 1804, 1859, 2926, 3365, 3441
Hpy99I CGWCG 1 cut(s) 2980
HpyCH4III ACNGT 6 cut(s) 395, 1951, 2108, 2336, 2629, 3611
HpyCH4IV ACGT 7 cut(s) 454, 586, 1169, 1518, 1830, 2738, 3245
HpyF10VI GCNNNNNNNGC 5 cut(s) 521, 674, 2993, 3122, 3152
HpySE526I ACGT 7 cut(s) 454, 586, 1169, 1518, 1830, 2738, 3245
HspAI GCGC 2 cut(s) 147, 681
Kpn2I TCCGGA 1 cut(s) 2850
Ksp22I TGATCA 4 cut(s) 22, 1090, 1543, 2182
KspAI GTTAAC 1 cut(s) 772
KspI CCGCGG 1 cut(s) 2910
LguI GCTCTTC 2 cut(s) 2564, 2630
LmnI GCTCC 4 cut(s) 578, 1500, 2237, 2350
Lsp1109I GCAGC 9 cut(s) 67, 70, 677, 1525, 1846, 2999, 3133, 3263, 3619
LweI GCATC 6 cut(s) 406, 887, 2035, 2226, 2316, 3346
MaeI CTAG 5 cut(s) 9, 119, 809, 1206, 3168
MaeII ACGT 7 cut(s) 454, 586, 1169, 1518, 1830, 2738, 3245
MfeI CAATTG 4 cut(s) 375, 3132, 3465, 3691
MflI RGATCY 3 cut(s) 1184, 1804, 2558
MhlI GDGCHC 2 cut(s) 203, 1199
MlsI TGGCCA 2 cut(s) 931, 2925
MluNI TGGCCA 2 cut(s) 931, 2925
MlyI GAGTC 6 cut(s) 7, 836, 2144, 2365, 3077, 3146
MmeI TCCRAC 3 cut(s) 61, 71, 475
Mox20I TGGCCA 2 cut(s) 931, 2925
Mph1103I ATGCAT 1 cut(s) 605
MroI TCCGGA 1 cut(s) 2850
MroXI GAANNNNTTC 1 cut(s) 126
MscI TGGCCA 2 cut(s) 931, 2925
MslI CAYNNNNRTG 3 cut(s) 818, 1149, 2438
Msp20I TGGCCA 2 cut(s) 931, 2925
MspA1I CMGCKG 4 cut(s) 2345, 2909, 2990, 3146
MspI CCGG 4 cut(s) 197, 469, 1834, 2851
MunI CAATTG 4 cut(s) 375, 3132, 3465, 3691
Mva1269I GAATGC 2 cut(s) 1612, 1861
MvnI CGCG 1 cut(s) 2909
MwoI GCNNNNNNNGC 5 cut(s) 521, 674, 2993, 3122, 3152
NciI CCSGG 2 cut(s) 198, 469
NcoI CCATGG 3 cut(s) 926, 2366, 3205
NdeI CATATG 1 cut(s) 1891
NlaIV GGNNCC 7 cut(s) 208, 1026, 1186, 1662, 1806, 2364, 2751
NmuCI GTSAC 4 cut(s) 283, 1753, 1792, 1847
NsiI ATGCAT 1 cut(s) 605
NspI RCATGY 4 cut(s) 603, 681, 955, 2357
OliI CACNNNNGTG 1 cut(s) 818
PaeI GCATGC 3 cut(s) 603, 681, 2357
PaeR7I CTCGAG 1 cut(s) 1300
PagI TCATGA 2 cut(s) 759, 1626
PaqCI CACCTGC 3 cut(s) 1258, 1417, 3160
PceI AGGCCT 3 cut(s) 2291, 2542, 3260
PciSI GCTCTTC 2 cut(s) 2564, 2630
PcsI WCGNNNNNNNCGW 2 cut(s) 326, 451
PctI GAATGC 2 cut(s) 1612, 1861
PdmI GAANNNNTTC 1 cut(s) 126
PflMI CCANNNNNTGG 1 cut(s) 2176
PfoI TCCNGGA 3 cut(s) 2509, 3093, 3593
PkrI GCNGC 9 cut(s) 82, 85, 667, 1540, 1861, 2989, 3148, 3278, 3634
PleI GAGTC 6 cut(s) 7, 835, 2144, 2365, 3077, 3145
PpsI GAGTC 6 cut(s) 7, 835, 2144, 2365, 3077, 3145
PpuMI RGGWCCY 2 cut(s) 968, 1618
PshAI GACNNNNGTC 1 cut(s) 747
PshBI ATTAAT 2 cut(s) 606, 3071
Psp5II RGGWCCY 2 cut(s) 968, 1618
PspN4I GGNNCC 7 cut(s) 208, 1026, 1186, 1662, 1806, 2364, 2751
PspPI GGNCC 5 cut(s) 968, 1079, 1618, 2749, 3497
PspPPI RGGWCCY 2 cut(s) 968, 1618
PstNI CAGNNNCTG 2 cut(s) 353, 824
PsuI RGATCY 3 cut(s) 1184, 1804, 2558
PvuII CAGCTG 3 cut(s) 2345, 2990, 3146
RsaI GTAC 8 cut(s) 135, 480, 781, 918, 950, 1253, 1838, 3211
RsaNI GTAC 8 cut(s) 134, 479, 780, 917, 949, 1252, 1837, 3210
RseI CAYNNNNRTG 3 cut(s) 818, 1149, 2438
SacII CCGCGG 1 cut(s) 2910
SapI GCTCTTC 2 cut(s) 2564, 2630
SatI GCNGC 9 cut(s) 81, 84, 666, 1539, 1860, 2988, 3147, 3277, 3633
Sau96I GGNCC 5 cut(s) 968, 1079, 1618, 2749, 3497
ScaI AGTACT 3 cut(s) 480, 781, 1253
SchI GAGTC 6 cut(s) 7, 836, 2144, 2365, 3077, 3146
SduI GDGCHC 2 cut(s) 203, 1199
SfaNI GCATC 6 cut(s) 406, 887, 2035, 2226, 2316, 3346
SfcI CTRYAG 1 cut(s) 3117
Sfr274I CTCGAG 1 cut(s) 1300
Sfr303I CCGCGG 1 cut(s) 2910
SgrBI CCGCGG 1 cut(s) 2910
SinI GGWCC 3 cut(s) 968, 1618, 3497
SlaI CTCGAG 1 cut(s) 1300
SmiI ATTTAAAT 1 cut(s) 3063
SmiMI CAYNNNNRTG 3 cut(s) 818, 1149, 2438
SmlI CTYRAG 2 cut(s) 912, 1300
SmoI CTYRAG 2 cut(s) 912, 1300
SphI GCATGC 3 cut(s) 603, 681, 2357
SseBI AGGCCT 3 cut(s) 2291, 2542, 3260
SsiI CCGC 6 cut(s) 2907, 2909, 3165, 3330, 3474, 3667
SspI AATATT 1 cut(s) 1691
SspMI CTAG 5 cut(s) 9, 119, 809, 1206, 3168
StuI AGGCCT 3 cut(s) 2291, 2542, 3260
StyI CCWWGG 5 cut(s) 150, 926, 2366, 3205, 3261
SwaI ATTTAAAT 1 cut(s) 3063
TaaI ACNGT 6 cut(s) 395, 1951, 2108, 2336, 2629, 3611
TaiI ACGT 7 cut(s) 457, 589, 1172, 1521, 1833, 2741, 3248
TaqI TCGA 4 cut(s) 320, 329, 1301, 2164
TatI WGTACW 5 cut(s) 133, 478, 779, 948, 1251
TscAI CASTG 9 cut(s) 400, 825, 1204, 1369, 2181, 2440, 2760, 3132, 3616
TseFI GTSAC 4 cut(s) 283, 1753, 1792, 1847
TseI GCWGC 9 cut(s) 80, 83, 665, 1538, 1859, 2987, 3146, 3276, 3632
Tsp45I GTSAC 4 cut(s) 283, 1753, 1792, 1847
TspGWI ACGGA 4 cut(s) 914, 1307, 1927, 3285
TspRI CASTG 9 cut(s) 400, 825, 1204, 1369, 2181, 2440, 2760, 3132, 3616
Van91I CCANNNNNTGG 1 cut(s) 2176
VpaK11BI GGWCC 3 cut(s) 968, 1618, 3497
VspI ATTAAT 2 cut(s) 606, 3071
XagI CCTNNNNNAGG 2 cut(s) 1342, 1995
XapI RAATTY 9 cut(s) 316, 433, 1378, 2268, 2642, 2688, 2917, 3058, 3377
XbaI TCTAGA 1 cut(s) 118
XceI RCATGY 4 cut(s) 603, 681, 955, 2357
XcmI CCANNNNNNNNNTGG 1 cut(s) 3181
XhoI CTCGAG 1 cut(s) 1300
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 5 cut(s) 9, 119, 809, 1206, 3168
ZrmI AGTACT 3 cut(s) 480, 781, 1253
Zsp2I ATGCAT 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.