pycom11g21290

COP1-interacting protein 7

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
24462119 .. 24465034
2916 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g21290.7

Sequence Viewer

Length: 1242 bp
ATGGACTCCAGAACTCGCCTTGACCATGTTCTCTTTCAACTCACTCCAACCAGAACAAGATGTGAACTGGTGATATTTGCTGCTGGTGGAGGTGCAAACGAGAAATTGGCTTCAGGGCTTCTAGAACCATTTCTTGGTCACTTGAAATGCGCCAAAGATCAGATCTCGAAAGGAGGGTACTCCATCATTCTTCGTCCTTCGGCCTCCGGTGCCTCCTGGTTCACCAAAGCCACTTTGCAGAGGTTTGTGCGATTTGTTAGCACACCAGAAGTTCTTGAGAGATTTGTGACCATTGAGAGGGAGATATTGCAAATTGAGAATTCGATTCAATCGAGTGAACTGACTGAATCAGAAGTGGATGGGAATCAAAATAAGTCAACTGCAATCAAGTTAAACAGTGAATCCTATGGAACCATTAATGCTGTGCCAGAAGAGAACTCCAAGATTCGTCTTCAACGTGTTTTGGAAACCCGGAAGGTTGTACTATGCAAAGAGCAAGCGATGGCTTATGCTCGTGCACTCGTTGCTGGATTTGAACTGGACTATATAGATGATCTTTTATCTTTTGCTGATACTTTTGGAGCTTCACGTTTAAGGGAAGCATGCATTAATTTCATAAATTTATACAAGCAAAAGAACGAAGATAGGCTTTGGATGGAAGAAATAGCAGCAATGCAGGCATGCGCTCAGCCACAACTGCCGTACTTGAGAACATCAGGAATAATTCTTGCTGGAGAAGATAATGACCCCAATCAGAATCTCATGATAAATGTTAACCAAAGTATTCTCTCTGTTGGGAAGAATGGCTCACTCGACACATCAGTGTCGGAGTCAACAAGTCATGGAAGTCTGGACGCGAACCAAGATAATAACTTGCCAGCATTGGATAAGACATCATCAACAGATGGGAAAGCTCAAGTACCAAACCCATGGCCAAACCATCCTCAGTACATGCACAATTTTCAAGGTCCTATATATCCACAAATGCACCCCTATCAAGGTTACCTTTTTCCCGGTATGCAGGTTCCGCCATATTATCCTGGGAATATGAAATGGCCTCCAAATGGGGAGGAATCTGGTCCTATTTTTGATCAGGAATCTGATGGTCGGAGGAATCGTAAATCTTATAGGAATAAAAAGAAACATTCTCATGAAAAAGTAATGGAAAATTCAGAAGAAGATGGATCCGGTGACAACACTGGCTCTAGTTACGAGAGTGAACCTGATCGATCAGATGCATAA

Protein Analysis

414

Amino Acids

46.12

Weight (kDa)

5.36

Isoelectric Point (pI)

48.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1012
AccB1I GGYRCC 1 cut(s) 209
AccB7I CCANNNNNTGG 1 cut(s) 134
AccII CGCG 1 cut(s) 857
AciI CCGC 1 cut(s) 1028
AclWI GGATC 2 cut(s) 1179, 1192
AcoI YGGCCR 1 cut(s) 932
AcsI RAATTY 3 cut(s) 319, 619, 1168
AcuI CTGAAG 1 cut(s) 96
AfaI GTAC 5 cut(s) 179, 483, 704, 921, 950
AfiI CCNNNNNNNGG 4 cut(s) 134, 297, 998, 1064
AflIII ACRYGT 1 cut(s) 457
AgsI TTSAA 6 cut(s) 38, 145, 329, 455, 536, 965
AjnI CCWGG 2 cut(s) 215, 1039
AjuI GAANNNNNNNTTGG 2 cut(s) 117, 149
AleI CACNNNNGTG 1 cut(s) 821
AluBI AGCT 2 cut(s) 584, 914
AluI AGCT 2 cut(s) 584, 914
Alw21I GWGCWC 1 cut(s) 520
Alw44I GTGCAC 1 cut(s) 516
AlwI GGATC 2 cut(s) 1179, 1192
AoxI GGCC 3 cut(s) 201, 932, 1055
ApaLI GTGCAC 1 cut(s) 516
ApeKI GCWGC 2 cut(s) 80, 668
ApoI RAATTY 3 cut(s) 319, 619, 1168
AseI ATTAAT 2 cut(s) 417, 609
Asp700I GAANNNNTTC 1 cut(s) 129
AspLEI GCGC 2 cut(s) 152, 686
AspS9I GGNCC 2 cut(s) 968, 1079
AsuC2I CCSGG 2 cut(s) 472, 1014
AsuHPI GGTGA 3 cut(s) 82, 214, 1202
AvaII GGWCC 2 cut(s) 968, 1079
BaeGI GKGCMC 1 cut(s) 520
BalI TGGCCA 1 cut(s) 934
BamHI GGATCC 1 cut(s) 1184
BanI GGYRCC 1 cut(s) 209
BauI CACGAG 1 cut(s) 513
BbsI GAAGAC 1 cut(s) 443
Bbv12I GWGCWC 1 cut(s) 520
BbvI GCAGC 2 cut(s) 67, 680
BccI CCATC 8 cut(s) 191, 353, 496, 649, 899, 948, 1097, 1175
BceAI ACGGC 1 cut(s) 685
BciT130I CCWGG 2 cut(s) 217, 1041
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 2 cut(s) 472, 1014
BfaI CTAG 2 cut(s) 122, 1206
BfuAI ACCTGC 1 cut(s) 1012
BglII AGATCT 1 cut(s) 162
BisI GCNGC 2 cut(s) 81, 669
BlpI GCTNAGC 1 cut(s) 687
BlsI GCNGC 2 cut(s) 82, 670
Bme1390I CCNGG 4 cut(s) 217, 472, 1014, 1041
Bme18I GGWCC 2 cut(s) 968, 1079
BmgT120I GGNCC 2 cut(s) 968, 1079
BmiI GGNNCC 4 cut(s) 211, 412, 1026, 1186
BmrFI CCNGG 4 cut(s) 217, 472, 1014, 1041
BmsI GCATC 1 cut(s) 1225
BpiI GAAGAC 1 cut(s) 443
BpmI CTGGAG 1 cut(s) 753
Bpu1102I GCTNAGC 1 cut(s) 687
BpuEI CTTGAG 3 cut(s) 296, 727, 900
BpuMI CCSGG 2 cut(s) 472, 1014
Bsa29I ATCGAT 1 cut(s) 1228
BsaBI GATNNNNATC 1 cut(s) 363
BsaJI CCNNGG 2 cut(s) 929, 1040
BsaWI WCCGGW 2 cut(s) 206, 1187
BsaXI ACNNNNNCTCC 2 cut(s) 1102, 1132
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 297, 998, 1064
Bse1I ACTGG 3 cut(s) 72, 543, 1204
Bse3DI GCAATG 1 cut(s) 678
Bse8I GATNNNNATC 1 cut(s) 363
BseBI CCWGG 2 cut(s) 217, 1041
BseCI ATCGAT 1 cut(s) 1228
BseDI CCNNGG 2 cut(s) 929, 1040
BseGI GGATG 3 cut(s) 364, 660, 940
BseJI GATNNNNATC 1 cut(s) 363
BseLI CCNNNNNNNGG 4 cut(s) 134, 297, 998, 1064
BseMI GCAATG 1 cut(s) 678
BseMII CTCAG 2 cut(s) 701, 959
BseNI ACTGG 3 cut(s) 72, 543, 1204
BseSI GKGCMC 1 cut(s) 520
BseXI GCAGC 2 cut(s) 67, 680
Bsh1236I CGCG 1 cut(s) 857
BshFI GGCC 3 cut(s) 203, 934, 1057
BshNI GGYRCC 1 cut(s) 209
BshVI ATCGAT 1 cut(s) 1228
BsiHKAI GWGCWC 1 cut(s) 520
BsiSI CCGG 4 cut(s) 207, 472, 1014, 1188
BslI CCNNNNNNNGG 4 cut(s) 134, 297, 998, 1064
BsnI GGCC 3 cut(s) 203, 934, 1057
Bsp1286I GDGCHC 1 cut(s) 520
Bsp143I GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
Bsp1720I GCTNAGC 1 cut(s) 687
Bsp19I CCATGG 1 cut(s) 929
BspACI CCGC 1 cut(s) 1028
BspANI GGCC 3 cut(s) 203, 934, 1057
BspCNI CTCAG 2 cut(s) 700, 958
BspDI ATCGAT 1 cut(s) 1228
BspFNI CGCG 1 cut(s) 857
BspHI TCATGA 2 cut(s) 762, 1150
BspLI GGNNCC 4 cut(s) 211, 412, 1026, 1186
BspMI ACCTGC 1 cut(s) 1012
BspPI GGATC 2 cut(s) 1179, 1192
BspT107I GGYRCC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 678
BsrI ACTGG 3 cut(s) 72, 543, 1204
BssECI CCNNGG 2 cut(s) 929, 1040
BssMI GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
BssSI CACGAG 1 cut(s) 513
BssT1I CCWWGG 1 cut(s) 929
Bst2BI CACGAG 1 cut(s) 513
Bst2UI CCWGG 2 cut(s) 217, 1041
Bst4CI ACNGT 1 cut(s) 398
Bst6I CTCTTC 1 cut(s) 426
BstAPI GCANNNNNTGC 1 cut(s) 524
BstC8I GCNNGC 5 cut(s) 498, 604, 678, 682, 879
BstDEI CTNAG 2 cut(s) 687, 945
BstDSI CCRYGG 1 cut(s) 929
BstEII GGTNACC 1 cut(s) 1001
BstF5I GGATG 3 cut(s) 364, 660, 940
BstFNI CGCG 1 cut(s) 857
BstHHI GCGC 2 cut(s) 152, 686
BstKTI GATC 7 cut(s) 160, 165, 556, 1093, 1187, 1228, 1232
BstMBI GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
BstMWI GCNNNNNNNGC 5 cut(s) 209, 524, 677, 697, 1027
BstNI CCWGG 2 cut(s) 217, 1041
BstNSI RCATGY 3 cut(s) 606, 684, 955
BstPI GGTNACC 1 cut(s) 1001
BstSCI CCNGG 4 cut(s) 215, 470, 1012, 1039
BstSLI GKGCMC 1 cut(s) 520
BstUI CGCG 1 cut(s) 857
BstV1I GCAGC 2 cut(s) 67, 680
BstV2I GAAGAC 1 cut(s) 443
BstX2I RGATCY 2 cut(s) 162, 1184
BstXI CCANNNNNNTGG 1 cut(s) 930
BstYI RGATCY 2 cut(s) 162, 1184
Bsu15I ATCGAT 1 cut(s) 1228
BsuRI GGCC 3 cut(s) 203, 934, 1057
BsuTUI ATCGAT 1 cut(s) 1228
BtgI CCRYGG 1 cut(s) 929
BtgZI GCGATG 1 cut(s) 515
BtsCI GGATG 3 cut(s) 364, 660, 940
BtsIMutI CAGTG 3 cut(s) 403, 828, 1197
BveI ACCTGC 1 cut(s) 1012
Cac8I GCNNGC 5 cut(s) 498, 604, 678, 682, 879
CciI TCATGA 2 cut(s) 762, 1150
CfoI GCGC 2 cut(s) 152, 686
Cfr13I GGNCC 2 cut(s) 968, 1079
ClaI ATCGAT 1 cut(s) 1228
CseI GACGC 1 cut(s) 863
Csp6I GTAC 5 cut(s) 178, 482, 703, 920, 949
CviAII CATG 8 cut(s) 26, 603, 681, 763, 842, 930, 952, 1151
CviQI GTAC 5 cut(s) 178, 482, 703, 920, 949
DdeI CTNAG 2 cut(s) 687, 945
DpnI GATC 7 cut(s) 159, 164, 555, 1092, 1186, 1227, 1231
DpnII GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
EaeI YGGCCR 1 cut(s) 932
Eam1104I CTCTTC 1 cut(s) 426
EarI CTCTTC 1 cut(s) 426
EciI GGCGGA 1 cut(s) 1017
Eco130I CCWWGG 1 cut(s) 929
Eco47I GGWCC 2 cut(s) 968, 1079
Eco57I CTGAAG 1 cut(s) 96
Eco91I GGTNACC 1 cut(s) 1001
EcoO109I RGGNCCY 1 cut(s) 968
EcoO65I GGTNACC 1 cut(s) 1001
EcoRI GAATTC 1 cut(s) 319
EcoRII CCWGG 2 cut(s) 215, 1039
EcoT14I CCWWGG 1 cut(s) 929
EcoT22I ATGCAT 2 cut(s) 608, 1240
ErhI CCWWGG 1 cut(s) 929
FaeI CATG 8 cut(s) 29, 606, 684, 766, 845, 933, 955, 1154
FalI AAGNNNNNCTT 4 cut(s) 633, 665, 990, 1022
FatI CATG 8 cut(s) 25, 602, 680, 762, 841, 929, 951, 1150
FbaI TGATCA 1 cut(s) 1090
Fnu4HI GCNGC 2 cut(s) 81, 669
FokI GGATG 3 cut(s) 371, 667, 927
Fsp4HI GCNGC 2 cut(s) 81, 669
FspBI CTAG 2 cut(s) 122, 1206
GlaI GCGC 2 cut(s) 151, 685
GluI GCNGC 2 cut(s) 81, 669
GsuI CTGGAG 1 cut(s) 753
HaeIII GGCC 3 cut(s) 203, 934, 1057
HapII CCGG 4 cut(s) 207, 472, 1014, 1188
HgaI GACGC 1 cut(s) 863
HhaI GCGC 2 cut(s) 152, 686
Hin1II CATG 8 cut(s) 29, 606, 684, 766, 845, 933, 955, 1154
Hin6I GCGC 2 cut(s) 150, 684
HinP1I GCGC 2 cut(s) 150, 684
HincII GTYRAC 3 cut(s) 378, 775, 834
HindII GTYRAC 3 cut(s) 378, 775, 834
HpaI GTTAAC 1 cut(s) 775
HpaII CCGG 4 cut(s) 207, 472, 1014, 1188
HphI GGTGA 3 cut(s) 82, 214, 1202
Hpy166II GTNNAC 8 cut(s) 65, 222, 338, 378, 518, 775, 834, 1220
Hpy188I TCNGA 8 cut(s) 162, 352, 756, 829, 1102, 1110, 1174, 1234
Hpy188III TCNNGA 9 cut(s) 9, 122, 166, 275, 717, 763, 851, 1094, 1151
Hpy8I GTNNAC 8 cut(s) 65, 222, 338, 378, 518, 775, 834, 1220
HpyAV CCTTC 2 cut(s) 207, 469
HpyCH4III ACNGT 1 cut(s) 398
HpyCH4IV ACGT 2 cut(s) 457, 589
HpyF10VI GCNNNNNNNGC 5 cut(s) 209, 524, 677, 697, 1027
HpyF3I CTNAG 2 cut(s) 687, 945
HpySE526I ACGT 2 cut(s) 457, 589
Hsp92II CATG 8 cut(s) 29, 606, 684, 766, 845, 933, 955, 1154
HspAI GCGC 2 cut(s) 150, 684
Ksp22I TGATCA 1 cut(s) 1090
KspAI GTTAAC 1 cut(s) 775
Kzo9I GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
LmnI GCTCC 1 cut(s) 581
Lsp1109I GCAGC 2 cut(s) 67, 680
LweI GCATC 1 cut(s) 1225
MaeI CTAG 2 cut(s) 122, 1206
MaeII ACGT 2 cut(s) 457, 589
MaeIII GTNAC 5 cut(s) 137, 286, 1001, 1190, 1208
MalI GATC 7 cut(s) 159, 164, 555, 1092, 1186, 1227, 1231
MboI GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
MboII GAAGA 9 cut(s) 182, 443, 443, 653, 671, 749, 811, 1187, 1190
MflI RGATCY 2 cut(s) 162, 1184
MhlI GDGCHC 1 cut(s) 520
MlsI TGGCCA 1 cut(s) 934
MluCI AATT 8 cut(s) 104, 312, 319, 610, 619, 723, 958, 1168
MluNI TGGCCA 1 cut(s) 934
MlyI GAGTC 1 cut(s) 839
MmeI TCCRAC 3 cut(s) 71, 807, 1088
Mox20I TGGCCA 1 cut(s) 934
Mph1103I ATGCAT 2 cut(s) 608, 1240
MroXI GAANNNNTTC 1 cut(s) 129
MscI TGGCCA 1 cut(s) 934
MseI TTAA 5 cut(s) 392, 417, 593, 609, 774
MslI CAYNNNNRTG 2 cut(s) 821, 1149
Msp20I TGGCCA 1 cut(s) 934
MspI CCGG 4 cut(s) 207, 472, 1014, 1188
MspR9I CCNGG 4 cut(s) 217, 472, 1014, 1041
MvaI CCWGG 2 cut(s) 217, 1041
MvnI CGCG 1 cut(s) 857
MwoI GCNNNNNNNGC 5 cut(s) 209, 524, 677, 697, 1027
NciI CCSGG 2 cut(s) 472, 1014
NcoI CCATGG 1 cut(s) 929
NdeII GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
NlaIII CATG 8 cut(s) 29, 606, 684, 766, 845, 933, 955, 1154
NlaIV GGNNCC 4 cut(s) 211, 412, 1026, 1186
NmuCI GTSAC 3 cut(s) 137, 286, 1190
NsiI ATGCAT 2 cut(s) 608, 1240
NspI RCATGY 3 cut(s) 606, 684, 955
OliI CACNNNNGTG 1 cut(s) 821
PaeI GCATGC 2 cut(s) 606, 684
PagI TCATGA 2 cut(s) 762, 1150
PcsI WCGNNNNNNNCGW 3 cut(s) 329, 454, 1114
PdmI GAANNNNTTC 1 cut(s) 129
PfeI GAWTC 9 cut(s) 325, 347, 364, 401, 445, 757, 1073, 1097, 1114
PflMI CCANNNNNTGG 1 cut(s) 134
PkrI GCNGC 2 cut(s) 82, 670
PleI GAGTC 1 cut(s) 838
PpsI GAGTC 1 cut(s) 838
PpuMI RGGWCCY 1 cut(s) 968
PshBI ATTAAT 2 cut(s) 417, 609
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 2 cut(s) 215, 1039
PspEI GGTNACC 1 cut(s) 1001
PspGI CCWGG 2 cut(s) 215, 1039
PspN4I GGNNCC 4 cut(s) 211, 412, 1026, 1186
PspPI GGNCC 2 cut(s) 968, 1079
PspPPI RGGWCCY 1 cut(s) 968
PsuI RGATCY 2 cut(s) 162, 1184
RsaI GTAC 5 cut(s) 179, 483, 704, 921, 950
RsaNI GTAC 5 cut(s) 178, 482, 703, 920, 949
RseI CAYNNNNRTG 2 cut(s) 821, 1149
SaqAI TTAA 5 cut(s) 392, 417, 593, 609, 774
SatI GCNGC 2 cut(s) 81, 669
Sau3AI GATC 7 cut(s) 157, 162, 553, 1090, 1184, 1225, 1229
Sau96I GGNCC 2 cut(s) 968, 1079
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 4 cut(s) 217, 472, 1014, 1041
SduI GDGCHC 1 cut(s) 520
SfaNI GCATC 1 cut(s) 1225
SinI GGWCC 2 cut(s) 968, 1079
SmiMI CAYNNNNRTG 2 cut(s) 821, 1149
SmlI CTYRAG 3 cut(s) 275, 706, 915
SmoI CTYRAG 3 cut(s) 275, 706, 915
SphI GCATGC 2 cut(s) 606, 684
Sse9I AATT 8 cut(s) 104, 312, 319, 610, 619, 723, 958, 1168
SsiI CCGC 1 cut(s) 1028
SspMI CTAG 2 cut(s) 122, 1206
StyD4I CCNGG 4 cut(s) 215, 470, 1012, 1039
StyI CCWWGG 1 cut(s) 929
TaaI ACNGT 1 cut(s) 398
TaiI ACGT 2 cut(s) 460, 592
TaqI TCGA 5 cut(s) 167, 323, 332, 813, 1228
TasI AATT 8 cut(s) 104, 312, 319, 610, 619, 723, 958, 1168
TatI WGTACW 2 cut(s) 481, 948
TfiI GAWTC 9 cut(s) 325, 347, 364, 401, 445, 757, 1073, 1097, 1114
Tru1I TTAA 5 cut(s) 392, 417, 593, 609, 774
Tru9I TTAA 5 cut(s) 392, 417, 593, 609, 774
TscAI CASTG 3 cut(s) 403, 828, 1204
TseFI GTSAC 3 cut(s) 137, 286, 1190
TseI GCWGC 2 cut(s) 80, 668
Tsp45I GTSAC 3 cut(s) 137, 286, 1190
TspDTI ATGAA 3 cut(s) 604, 1064, 1167
TspRI CASTG 3 cut(s) 403, 828, 1204
Van91I CCANNNNNTGG 1 cut(s) 134
VneI GTGCAC 1 cut(s) 516
VpaK11BI GGWCC 2 cut(s) 968, 1079
VspI ATTAAT 2 cut(s) 417, 609
XapI RAATTY 3 cut(s) 319, 619, 1168
XbaI TCTAGA 1 cut(s) 121
XceI RCATGY 3 cut(s) 606, 684, 955
XmnI GAANNNNTTC 1 cut(s) 129
XspI CTAG 2 cut(s) 122, 1206
Zsp2I ATGCAT 2 cut(s) 608, 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.