Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007931

Physical Location & Seq

Genomic Coordinates Reverse (-)

13676388 .. 13683577

Gene Structure 7190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g20630.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3609 bp

ATGGACTCCAGGACTCGCCTTGATCATGTTCTCTTCCAACTCACTCCAACCAGAACAAGATGCGAACTTATAATGTTTGCTGCTGCTGGTGGAAGTGAGAAATTGGCTTCAGGGTTTTTGGAACCATTTCTTACACATTTGAAATGTGCAAAGGATCAGATTTCCAAAGGAGGGTACTCCATTACTCTTCGTCCTTCCGGCTCCGGTGCCTCTTGGTTCACCAAAGCCACTCTCCAAAGGTTTGTGAGATTTGTAAGTACACCAGAAGTTCTTGAGAGATTTGTCACTATTGAGAAAGAAATTTTGCAGATTGAGAATTCACTTGAATCATGTGAACTCGCAGAGGCAGAAGCTGATGGGAGTAAATCAGCAGCCATAAAGCCAAACAATGAATCTAATGAGACAACTGATGCTGTGCCAGAAGAGAATTCCAAGATTCGTCTTCAACGTGTTCTGGAAACTCGGAAGGTAGTACTCTGCAAAGAGCAAGCAATGGCTTATGCTCGTGCTTTAGTTGCCGGATTTGAACTGGACTATATTGATGATCTTTTATCTTTTGCTGATACTTTTGGAGCTTCTCGATTAAGGGAAGCATGCATAAATTTCATAAATCTGTACAAGCAAAAGAATGAAGATAGGTTTTGGATGGAAGAAATAGCAGCAATGCAGGCACTCTCTCAGCCGCAACTGCCATACTTGGCAACATCAGGAATCATTCTTGCTGGAGAAGATAATGATCCCAGTCAGAATCTTAACCAAAGTACTCTCTCTATTGGGAAGAACGGTTCACTAGACACGTCAGTGTCTGATTCAACTGCAAGTCATGGAAGTCTGGATGCAAGCCAAGATGGGAAAGCTCAAGTACCAAATCCATGGCCAAACCATCTTCCACAGTACATGCAAAATTTCCAAGGTCTTGCATTTCAACAAATGCACCCCTATCAAGGTTATATGTTCCCTGGTATGCAGGTTCCCCCATATTATCCAGGGAATATGAAATGGCCTCCAAACATGGAAGACTCTGGCTTTATGTTTGATCGGGAATCTGATGATCATCGGAAGCATAAATCTCATAGAACTAAAAAGAAACATTCTCATGAAAGAGCACTTGAAACTTCAGAACAAGATGGATCCAATGAAGACACTGCAGGTTCAAGTTATGAAAGTGAATCTGATGATCATTTGCAGAATGGTAAAAGGCACTCTGGAACAGAGCAGCAGCATCAGAAAAAGCATGGGCAGAAGTCCTCAAGAAAGGTTGTTATCCGCAATATTAATTACATAACCTCTAAGAGGGATGGAGAAAGTGGGTCTGAGGAAAATTCATCCAATGAGGATGGATACATTGATGGGAAATCCATTAAACAGCAGGTAGAGGAAGCTGTTGGTTCATTGGAGAAGAGACATAAATCAAGCTCACGTCATCACAAAAAACAAGGTGGAAGCAAGTTGCATGGCAGTGTAGATGATTCAAATGGAAAGGAACTTAAAAATGCAGATGCAAATATACCTGAGGGAGAAAAGCAAAATGACAACTGGAATGCTTTCCAGAATCTTCTCATGAGGGATGAGGATCCCAGTTCTTTTGCTACAGAATCACATAATCTGTGGATTGAAGATGAATATCTTGCAAGTAAAAACTCTGGTGAAGGACGATCGTTTGAATTTAACCAGGAAGAAGAGAAAGCAACGAAGCAAAGAGCAGTTTCAAGTGAGTATTTGGTGGTGACAGAGAGGGATACAGGAAATGAGAGTAAAACTCAGGGTCCATACTTTGAAGGTGGTGGTGATGTTGGTTGCATTACCAAGAAAAATGGAGCCTATGAGGATTTTTTATTTTCACAGAGAAATGAAGAGTCAAGGATCAACTCCCATGATACTCTATCTGATTGCGCAAATGAATTATACAAAACCAAATGTCCTAAAGAAGGGGATTGGTTTATCAGCAACCAAACAGATAATCAGGTTGGCAGCAATGATCTGAAAATGCTTGATGGTGTTTACGCTTCATCGGTGTTGGCTATGGACACTGTTCATGCTGAGAAAAAGAGGGAAGTTCTAGTGGATGACTCTTTCATGGTTCAAGACCGATCAGTAGTTGATCATCAATCTGATTCTCAGTTCAGGACTGACATAAGCTTCGAACCAGAATACACTGGAGCTACTCAAAATGAATATGGCAAGCCAGAGATTTCAAATGAGCCTGCAGCCTTTAGCATGCATGAACCAGATGACCTATACATGGTGCTTGATCGTGGTTCTGCTGTGGAGCAGGATGTGGCACCATGGAATCCAGAGATGGACTATGAAGTTAATGTTTCATCAGTTGAAGCCAGCGAAAAGAATCCTGGCATTGAAACGACCGATTCTATTGGTGAGGAGCAGCCTTCTAATAGTAAGGGCAAGAACGCTAAAAATAGTGGAATTCCAGGAGGAAAAATTCCGACCAAAGAAGCAAGGTCTAAACTTGCAAATGGATCTTTGGGGAAGAGCAGATATGATATGTTATCCAGAAGTAAGAAACCTTCTACTGTAAGCAAAAGCACATTTCACAAAAGCAAATTTGAAAAGGATGAAGAACAAAGAAAGAGAATGGAAGAGTTAGTTATTGAACGCCAGAAGAGAATTGCTGAGAGGAGTGCTGCTCGTGGTTCTAGTACTGCAACATCTAAGAAACCTCTGACAGAAACTAAAAATGTCAAAACCACTGGGACCATGACAAAGAAGGATAAGCTTAAAGTTCAGTCCCCAACCCAAGAGACCAAGAAAGCAGAGAAGCCTATTATGCGGAGTTCCACCATTGAACGGCTTGCAACTGCAAGAGTAACTGAGAAGTTGCCAACAACTCTGCCGAATTCTGGCCAACCCAAAAAGCAAACAATCAAGGCAATCGGTGTGGCTGCAGCTGCCTCATCACAGAAGGCAGTTGGTGCTGTGAACAAGAAACCAAGTCCAAACAAAACCAAACCATCAGAAGCGAAAGACCGCTTGAAGAATTCAAATCAGTTACTTTCGTCCAACTCTGATGTCCAGGACAAAGTGTGCATTGAAGCCACAGAAGCACTGCCAGTTGAGTTGACACGTAAGGCTGCCATCATTGAGTTGGAAGAGACTAAGCAACTCCATAGTATATCTTCCATTGAAAAAAATGAGGGAAACTTGTTGTTGCAAAGTGAGGCATTAGATAAAGGAAGCTGCCATGAGCGTTCACCCGATTCGGATTCACTTGCACCTATTGATGATCCCGCACAGCCTGAACACTTAACAGCTGATGCTGAAGAACTATCTCGGGAATCTCTGGTTTTTAGTGAAGACAAAAGAAACTACAATGAAGACAGTGCAGAGCCTCATATTCTGGAATCACCTACCAAACCTCTAATTGTTCCAGCGGTGAATATTGACGAAAATGGTGACACAACTAAAGGTTTTCCAGTCTCTACTGAAATTTCTGAAATAGAAATCTTTACTCCACCATATAATGAAACAGCCTCAGAACAACTCAACTCAAGGAAGAAATGGAATGGTGATGAGAACTCTCCTAAAGCTGCCAAAGGGTTTAGGAAACTTCTGTTGTTTGGACGAAAGAGCAAGAACACTCCTGTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009718 GO:0009812 GO:0009813 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015994 GO:0015995 GO:0016020 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033013 GO:0033014 GO:0034641 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046148 GO:0046283 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051186 GO:0051188 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0071944 GO:0080090 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1203

Amino Acids

133.66

Weight (kDa)

5.55

Isoelectric Point (pI)

50.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27430 AT4G27430
fragaria_vesca	FvH4_3g20630 FvH4_3g20630 FvH4_3g20630 FvH4_3g20630 FvH4_3g20630
malus_domestica	MD03G1223400.v1.1 MD11G1241400.v1.1
prunus_persica	Prupe.4G186100_v2.0.a1 Prupe.4G186100_v2.0.a1
pyrus_communis	pycom03g17170 pycom11g21290 pycom11g21300
rosa_chinensis	RchiOBHm_Chr5g0034651
rosa_laevigata	RLG00000033565
rosa_multiflora	Rmu_sc0002460.1_g000082
rosa_roxburghii	Rroxscaffold_1G00045660
rosa_rugosa	Rorug05G0147400
rosa_samantha	Rh5AG239600 Rh5BG240300 Rh5CG270700 Rh5DG248500
rosa_wichuraiana	Rw5G021950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	71
Acc16I	TGCGCA	1 cut(s)	1894
Acc36I	ACCTGC	3 cut(s)	958, 1139, 1360
AccB1I	GGYRCC	2 cut(s)	206, 2281
AciI	CCGC	6 cut(s)	683, 1267, 2788, 2986, 3246, 3389
AclWI	GGATC	9 cut(s)	162, 731, 1125, 1138, 1568, 1581, 1871, 2485, 3236
AcoI	YGGCCR	2 cut(s)	875, 2860
AcuI	CTGAAG	3 cut(s)	93, 1101, 3297
AfaI	GTAC	8 cut(s)	176, 259, 474, 617, 763, 864, 896, 2659
AfiI	CCNNNNNNNGG	7 cut(s)	171, 944, 1293, 1928, 2242, 2805, 2858
AflIII	ACRYGT	3 cut(s)	448, 795, 3080
AjiI	CACGTC	2 cut(s)	798, 1421
AjnI	CCWGG	7 cut(s)	8, 958, 985, 1671, 2347, 2428, 3030
AleI	CACNNNNGTG	1 cut(s)	800
AloI	GAACNNNNNNTCC	2 cut(s)	769, 801
Alw21I	GWGCWC	1 cut(s)	1108
Alw26I	GTCTC	5 cut(s)	395, 1396, 2753, 3104, 3439
AlwI	GGATC	9 cut(s)	162, 731, 1125, 1138, 1568, 1581, 1871, 2485, 3236
AlwNI	CAGNNNCTG	2 cut(s)	353, 806
Ama87I	CYCGRG	1 cut(s)	3288
AoxI	GGCC	3 cut(s)	875, 1001, 2860
ArsI	GACNNNNNNTTYG	2 cut(s)	2123, 2155
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	2 cut(s)	126, 1544
AspLEI	GCGC	1 cut(s)	1895
AspS9I	GGNCC	2 cut(s)	1766, 2712
AsuII	TTCGAA	1 cut(s)	2142
AvaI	CYCGRG	1 cut(s)	3288
AvaII	GGWCC	2 cut(s)	1766, 2712
AxyI	CCTNAGG	1 cut(s)	1512
BalI	TGGCCA	2 cut(s)	877, 2862
BamHI	GGATCC	2 cut(s)	1130, 1573
BanI	GGYRCC	2 cut(s)	206, 2281
BarI	GAAGNNNNNNTAC	2 cut(s)	2509, 2541
BauI	CACGAG	2 cut(s)	504, 2646
BbsI	GAAGAC	5 cut(s)	434, 1023, 1146, 3318, 3339
Bbv12I	GWGCWC	1 cut(s)	1108
BceAI	ACGGC	1 cut(s)	2822
BciT130I	CCWGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
BciVI	GTATCC	2 cut(s)	1334, 1732
BclI	TGATCA	4 cut(s)	22, 1051, 1177, 2101
BcoDI	GTCTC	5 cut(s)	395, 1396, 2753, 3104, 3439
BfaI	CTAG	3 cut(s)	791, 2060, 2655
BfmI	CTRYAG	4 cut(s)	1146, 1590, 2205, 2901
BfuAI	ACCTGC	3 cut(s)	958, 1139, 1360
BfuI	GTATCC	2 cut(s)	1334, 1732
BmcAI	AGTACT	3 cut(s)	474, 763, 2659
Bme1390I	CCNGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
Bme18I	GGWCC	2 cut(s)	1766, 2712
BmeT110I	CYCGRG	1 cut(s)	3288
BmgBI	CACGTC	2 cut(s)	798, 1421
BmgT120I	GGNCC	2 cut(s)	1766, 2712
BmrFI	CCNGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
BmrI	ACTGGG	3 cut(s)	735, 1572, 2718
BmsI	GCATC	6 cut(s)	50, 400, 826, 1231, 1489, 3262
BmuI	ACTGGG	3 cut(s)	735, 1572, 2718
BpiI	GAAGAC	5 cut(s)	434, 1023, 1146, 3318, 3339
BplI	GAGNNNNNCTC	4 cut(s)	1744, 1776, 2629, 2661
BpmI	CTGGAG	2 cut(s)	744, 2178
Bpu14I	TTCGAA	1 cut(s)	2142
BpuEI	CTTGAG	4 cut(s)	293, 843, 1234, 3490
BsaAI	YACGTR	1 cut(s)	3083
BsaBI	GATNNNNATC	4 cut(s)	735, 1053, 1572, 1623
BsaI	GGTCTC	1 cut(s)	2753
BsaJI	CCNNGG	5 cut(s)	872, 910, 958, 986, 2285
BsaWI	WCCGGW	1 cut(s)	203
Bsc4I	CCNNNNNNNGG	7 cut(s)	171, 944, 1293, 1928, 2242, 2805, 2858
Bse1I	ACTGG	8 cut(s)	534, 741, 1541, 1578, 2161, 2713, 3068, 3431
Bse21I	CCTNAGG	1 cut(s)	1512
Bse3DI	GCAATG	3 cut(s)	498, 669, 1981
Bse8I	GATNNNNATC	4 cut(s)	735, 1053, 1572, 1623
BseBI	CCWGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
BseDI	CCNNGG	5 cut(s)	872, 910, 958, 986, 2285
BseGI	GGATG	9 cut(s)	651, 841, 1303, 1325, 1342, 1573, 2071, 2281, 2578
BseJI	GATNNNNATC	4 cut(s)	735, 1053, 1572, 1623
BseLI	CCNNNNNNNGG	7 cut(s)	171, 944, 1293, 1928, 2242, 2805, 2858
BseMI	GCAATG	3 cut(s)	498, 669, 1981
BseMII	CTCAG	9 cut(s)	692, 1305, 1503, 1775, 2031, 2132, 2622, 2820, 3504
BseNI	ACTGG	8 cut(s)	534, 741, 1541, 1578, 2161, 2713, 3068, 3431
BseRI	GAGGAG	2 cut(s)	2393, 2650
BsgI	GTGCAG	1 cut(s)	3360
Bsh1285I	CGRYCG	2 cut(s)	1658, 2364
BshFI	GGCC	3 cut(s)	877, 1003, 2862
BshNI	GGYRCC	2 cut(s)	206, 2281
BsiEI	CGRYCG	2 cut(s)	1658, 2364
BsiHKAI	GWGCWC	1 cut(s)	1108
BsiHKCI	CYCGRG	1 cut(s)	3288
BsiSI	CCGG	3 cut(s)	198, 204, 519
BslFI	GGGAC	2 cut(s)	2725, 2731
BslI	CCNNNNNNNGG	7 cut(s)	171, 944, 1293, 1928, 2242, 2805, 2858
BsmAI	GTCTC	5 cut(s)	395, 1396, 2753, 3104, 3439
BsmFI	GGGAC	2 cut(s)	2725, 2731
BsmI	GAATGC	1 cut(s)	1546
BsnI	GGCC	3 cut(s)	877, 1003, 2862
Bso31I	GGTCTC	1 cut(s)	2753
BsoBI	CYCGRG	1 cut(s)	3288
Bsp119I	TTCGAA	1 cut(s)	2142
Bsp1286I	GDGCHC	1 cut(s)	1108
Bsp1407I	TGTACA	1 cut(s)	615
Bsp19I	CCATGG	2 cut(s)	872, 2285
BspACI	CCGC	6 cut(s)	683, 1267, 2788, 2986, 3246, 3389
BspANI	GGCC	3 cut(s)	877, 1003, 2862
BspCNI	CTCAG	9 cut(s)	691, 1306, 1504, 1774, 2032, 2131, 2623, 2821, 3503
BspHI	TCATGA	2 cut(s)	1096, 1560
BspMAI	CTGCAG	3 cut(s)	1150, 2209, 2905
BspMI	ACCTGC	3 cut(s)	958, 1139, 1360
BspPI	GGATC	9 cut(s)	162, 731, 1125, 1138, 1568, 1581, 1871, 2485, 3236
BspQI	GCTCTTC	1 cut(s)	2483
BspT104I	TTCGAA	1 cut(s)	2142
BspT107I	GGYRCC	2 cut(s)	206, 2281
BspTNI	GGTCTC	1 cut(s)	2753
BsrDI	GCAATG	3 cut(s)	498, 669, 1981
BsrGI	TGTACA	1 cut(s)	615
BsrI	ACTGG	8 cut(s)	534, 741, 1541, 1578, 2161, 2713, 3068, 3431
BssECI	CCNNGG	5 cut(s)	872, 910, 958, 986, 2285
BssSI	CACGAG	2 cut(s)	504, 2646
BssT1I	CCWWGG	3 cut(s)	872, 910, 2285
Bst2BI	CACGAG	2 cut(s)	504, 2646
Bst2UI	CCWGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
Bst4CI	ACNGT	5 cut(s)	785, 894, 2032, 2533, 3338
BstAPI	GCANNNNNTGC	1 cut(s)	2930
BstAUI	TGTACA	1 cut(s)	615
BstBAI	YACGTR	1 cut(s)	3083
BstBI	TTCGAA	1 cut(s)	2142
BstC8I	GCNNGC	9 cut(s)	489, 595, 669, 841, 2183, 2205, 2219, 2335, 2811
BstDSI	CCRYGG	2 cut(s)	872, 2285
BstENI	CCTNNNNNAGG	2 cut(s)	1291, 1926
BstF5I	GGATG	9 cut(s)	651, 841, 1303, 1325, 1342, 1573, 2071, 2281, 2578
BstHHI	GCGC	1 cut(s)	1895
BstMAI	GTCTC	5 cut(s)	395, 1396, 2753, 3104, 3439
BstMCI	CGRYCG	2 cut(s)	1658, 2364
BstMWI	GCNNNNNNNGC	7 cut(s)	515, 668, 688, 2785, 2906, 2930, 3059
BstNI	CCWGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
BstNSI	RCATGY	3 cut(s)	597, 901, 2221
BstSCI	CCNGG	7 cut(s)	8, 958, 985, 1671, 2347, 2428, 3030
BstSFI	CTRYAG	4 cut(s)	1146, 1590, 2205, 2901
BstV2I	GAAGAC	5 cut(s)	434, 1023, 1146, 3318, 3339
BstX2I	RGATCY	3 cut(s)	1130, 1573, 2477
BstXI	CCANNNNNNTGG	1 cut(s)	873
BstYI	RGATCY	3 cut(s)	1130, 1573, 2477
Bsu36I	CCTNAGG	1 cut(s)	1512
BsuI	GTATCC	2 cut(s)	1334, 1732
BsuRI	GGCC	3 cut(s)	877, 1003, 2862
BtgI	CCRYGG	2 cut(s)	872, 2285
BtrI	CACGTC	2 cut(s)	798, 1421
BtsCI	GGATG	9 cut(s)	651, 841, 1303, 1325, 1342, 1573, 2071, 2281, 2578
BtsI	GCAGTG	3 cut(s)	1143, 1465, 3062
BtsIMutI	CAGTG	8 cut(s)	807, 1143, 1465, 2028, 2154, 2706, 3062, 3343
BveI	ACCTGC	3 cut(s)	958, 1139, 1360
Cac8I	GCNNGC	9 cut(s)	489, 595, 669, 841, 2183, 2205, 2219, 2335, 2811
CaiI	CAGNNNCTG	2 cut(s)	353, 806
CciI	TCATGA	2 cut(s)	1096, 1560
CfoI	GCGC	1 cut(s)	1895
Cfr13I	GGNCC	2 cut(s)	1766, 2712
Csp6I	GTAC	8 cut(s)	175, 258, 473, 616, 762, 863, 895, 2658
CspCI	CAANNNNNGTGG	2 cut(s)	2877, 2912
CviQI	GTAC	8 cut(s)	175, 258, 473, 616, 762, 863, 895, 2658
EaeI	YGGCCR	2 cut(s)	875, 2860
Eco130I	CCWWGG	3 cut(s)	872, 910, 2285
Eco31I	GGTCTC	1 cut(s)	2753
Eco47I	GGWCC	2 cut(s)	1766, 2712
Eco57I	CTGAAG	3 cut(s)	93, 1101, 3297
Eco81I	CCTNAGG	1 cut(s)	1512
Eco88I	CYCGRG	1 cut(s)	3288
EcoNI	CCTNNNNNAGG	2 cut(s)	1291, 1926
EcoRI	GAATTC	5 cut(s)	316, 427, 2424, 2854, 2995
EcoRII	CCWGG	7 cut(s)	8, 958, 985, 1671, 2347, 2428, 3030
EcoT14I	CCWWGG	3 cut(s)	872, 910, 2285
EcoT22I	ATGCAT	2 cut(s)	599, 2223
ErhI	CCWWGG	3 cut(s)	872, 910, 2285
FaqI	GGGAC	2 cut(s)	2725, 2731
FauI	CCCGC	1 cut(s)	3253
FbaI	TGATCA	4 cut(s)	22, 1051, 1177, 2101
FokI	GGATG	9 cut(s)	658, 848, 1310, 1312, 1349, 1580, 2078, 2288, 2585
FspBI	CTAG	3 cut(s)	791, 2060, 2655
FspI	TGCGCA	1 cut(s)	1894
GlaI	GCGC	1 cut(s)	1894
GsuI	CTGGAG	2 cut(s)	744, 2178
HaeIII	GGCC	3 cut(s)	877, 1003, 2862
HapII	CCGG	3 cut(s)	198, 204, 519
HhaI	GCGC	1 cut(s)	1895
Hin6I	GCGC	1 cut(s)	1893
HinP1I	GCGC	1 cut(s)	1893
HincII	GTYRAC	1 cut(s)	3078
HindII	GTYRAC	1 cut(s)	3078
HindIII	AAGCTT	2 cut(s)	2137, 2732
HpaII	CCGG	3 cut(s)	198, 204, 519
Hpy166II	GTNNAC	8 cut(s)	219, 260, 335, 788, 2002, 2938, 3078, 3209
Hpy8I	GTNNAC	8 cut(s)	219, 260, 335, 788, 2002, 2938, 3078, 3209
HpyAV	CCTTC	9 cut(s)	204, 460, 1643, 1772, 1922, 2397, 2535, 2719, 2914
HpyCH4III	ACNGT	5 cut(s)	785, 894, 2032, 2533, 3338
HpyCH4IV	ACGT	4 cut(s)	448, 797, 1420, 3082
HpyF10VI	GCNNNNNNNGC	7 cut(s)	515, 668, 688, 2785, 2906, 2930, 3059
HpySE526I	ACGT	4 cut(s)	448, 797, 1420, 3082
HspAI	GCGC	1 cut(s)	1893
Ksp22I	TGATCA	4 cut(s)	22, 1051, 1177, 2101
LguI	GCTCTTC	1 cut(s)	2483
LmnI	GCTCC	6 cut(s)	206, 572, 1817, 2159, 2269, 2380
LweI	GCATC	6 cut(s)	50, 400, 826, 1231, 1489, 3262
MaeI	CTAG	3 cut(s)	791, 2060, 2655
MaeII	ACGT	4 cut(s)	448, 797, 1420, 3082
MaeIII	GTNAC	5 cut(s)	283, 1726, 2824, 3006, 3410
MfeI	CAATTG	1 cut(s)	3604
MflI	RGATCY	3 cut(s)	1130, 1573, 2477
MhlI	GDGCHC	1 cut(s)	1108
MlsI	TGGCCA	2 cut(s)	877, 2862
MluNI	TGGCCA	2 cut(s)	877, 2862
MlyI	GAGTC	4 cut(s)	7, 1013, 1865, 2063
MmeI	TCCRAC	5 cut(s)	61, 71, 2468, 3042, 3084
Mox20I	TGGCCA	2 cut(s)	877, 2862
Mph1103I	ATGCAT	2 cut(s)	599, 2223
MroXI	GAANNNNTTC	2 cut(s)	126, 1544
MscI	TGGCCA	2 cut(s)	877, 2862
MseI	TTAA	9 cut(s)	584, 753, 1275, 1362, 1488, 1668, 2313, 2736, 3263
MslI	CAYNNNNRTG	3 cut(s)	800, 1095, 1458
Msp20I	TGGCCA	2 cut(s)	877, 2862
MspA1I	CMGCKG	3 cut(s)	2906, 3269, 3389
MspI	CCGG	3 cut(s)	198, 204, 519
MspR9I	CCNGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
MunI	CAATTG	1 cut(s)	3604
Mva1269I	GAATGC	1 cut(s)	1546
MvaI	CCWGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
MwoI	GCNNNNNNNGC	7 cut(s)	515, 668, 688, 2785, 2906, 2930, 3059
NcoI	CCATGG	2 cut(s)	872, 2285
NmuCI	GTSAC	3 cut(s)	283, 1726, 3410
NsbI	TGCGCA	1 cut(s)	1894
NsiI	ATGCAT	2 cut(s)	599, 2223
NspI	RCATGY	3 cut(s)	597, 901, 2221
NspV	TTCGAA	1 cut(s)	2142
OliI	CACNNNNGTG	1 cut(s)	800
PaeI	GCATGC	2 cut(s)	597, 2221
PagI	TCATGA	2 cut(s)	1096, 1560
PciSI	GCTCTTC	1 cut(s)	2483
PcsI	WCGNNNNNNNCGW	1 cut(s)	445
PctI	GAATGC	1 cut(s)	1546
PdmI	GAANNNNTTC	2 cut(s)	126, 1544
PfoI	TCCNGGA	3 cut(s)	8, 2428, 3030
Ple19I	CGATCG	1 cut(s)	1658
PleI	GAGTC	4 cut(s)	7, 1013, 1864, 2063
PpsI	GAGTC	4 cut(s)	7, 1013, 1864, 2063
Ppu21I	YACGTR	1 cut(s)	3083
PshBI	ATTAAT	1 cut(s)	1275
PsiI	TTATAA	1 cut(s)	71
Psp6I	CCWGG	7 cut(s)	8, 958, 985, 1671, 2347, 2428, 3030
PspGI	CCWGG	7 cut(s)	8, 958, 985, 1671, 2347, 2428, 3030
PspPI	GGNCC	2 cut(s)	1766, 2712
PstI	CTGCAG	3 cut(s)	1150, 2209, 2905
PstNI	CAGNNNCTG	2 cut(s)	353, 806
PsuI	RGATCY	3 cut(s)	1130, 1573, 2477
PvuI	CGATCG	1 cut(s)	1658
PvuII	CAGCTG	2 cut(s)	2906, 3269
RsaI	GTAC	8 cut(s)	176, 259, 474, 617, 763, 864, 896, 2659
RsaNI	GTAC	8 cut(s)	175, 258, 473, 616, 762, 863, 895, 2658
RseI	CAYNNNNRTG	3 cut(s)	800, 1095, 1458
SapI	GCTCTTC	1 cut(s)	2483
SaqAI	TTAA	9 cut(s)	584, 753, 1275, 1362, 1488, 1668, 2313, 2736, 3263
Sau96I	GGNCC	2 cut(s)	1766, 2712
ScaI	AGTACT	3 cut(s)	474, 763, 2659
SchI	GAGTC	4 cut(s)	7, 1013, 1865, 2063
ScrFI	CCNGG	7 cut(s)	10, 960, 987, 1673, 2349, 2430, 3032
SduI	GDGCHC	1 cut(s)	1108
SfaNI	GCATC	6 cut(s)	50, 400, 826, 1231, 1489, 3262
SfcI	CTRYAG	4 cut(s)	1146, 1590, 2205, 2901
SfuI	TTCGAA	1 cut(s)	2142
SinI	GGWCC	2 cut(s)	1766, 2712
SmiMI	CAYNNNNRTG	3 cut(s)	800, 1095, 1458
SmlI	CTYRAG	4 cut(s)	272, 858, 1249, 3505
SmoI	CTYRAG	4 cut(s)	272, 858, 1249, 3505
SphI	GCATGC	2 cut(s)	597, 2221
SsiI	CCGC	6 cut(s)	683, 1267, 2788, 2986, 3246, 3389
SspI	AATATT	2 cut(s)	1273, 3397
SspMI	CTAG	3 cut(s)	791, 2060, 2655
StyD4I	CCNGG	7 cut(s)	8, 958, 985, 1671, 2347, 2428, 3030
StyI	CCWWGG	3 cut(s)	872, 910, 2285
TaaI	ACNGT	5 cut(s)	785, 894, 2032, 2533, 3338
TaiI	ACGT	4 cut(s)	451, 800, 1423, 3085
TaqI	TCGA	2 cut(s)	580, 2142
TaqII	GACCGA	2 cut(s)	2103, 2378
TatI	WGTACW	6 cut(s)	257, 472, 615, 761, 894, 2657
TauI	GCSGC	1 cut(s)	685
Tru1I	TTAA	9 cut(s)	584, 753, 1275, 1362, 1488, 1668, 2313, 2736, 3263
Tru9I	TTAA	9 cut(s)	584, 753, 1275, 1362, 1488, 1668, 2313, 2736, 3263
TscAI	CASTG	8 cut(s)	807, 1150, 1465, 2035, 2161, 2713, 3069, 3343
TseFI	GTSAC	3 cut(s)	283, 1726, 3410
Tsp45I	GTSAC	3 cut(s)	283, 1726, 3410
TspRI	CASTG	8 cut(s)	807, 1150, 1465, 2035, 2161, 2713, 3069, 3343
VpaK11BI	GGWCC	2 cut(s)	1766, 2712
VspI	ATTAAT	1 cut(s)	1275
XagI	CCTNNNNNAGG	2 cut(s)	1291, 1926
XceI	RCATGY	3 cut(s)	597, 901, 2221
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3100
XmnI	GAANNNNTTC	2 cut(s)	126, 1544
XspI	CTAG	3 cut(s)	791, 2060, 2655
ZrmI	AGTACT	3 cut(s)	474, 763, 2659
Zsp2I	ATGCAT	2 cut(s)	599, 2223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.