AT4G31880

Has 114836 Blast hits to 56273 proteins in 1914 species Archae - 187

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0005705
Physical Location & Seq
Reverse (-)
15418947 .. 15424311
5365 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G31880.2

Sequence Viewer

Length: 2622 bp
ATGTCGGATTCTGATAAAGAGCTCGAGAATCAGATTATTGAAGCTGGGGAAAAGCTTATTGACCCGCCTTCTTCACTCGATGAGCTTCTCTCTTTCCTTGACAAACTTTTCGTATCCCTGGCGGAGGTTGAACAGTCACCTCCCGACTCAATGCAGAATGCACTCACTCCATTGATGAAAGGATTAGTCGGTGGAAAACTCTTCAAGCATTCAGATGTCGATGTCAAAGTTGCTGTCGCTGCCTGCATCAGTGAGATTACAAGAATAACTGCTCCTGATGCTCCTTATGATGATGACCAGATGAAGGAAGTATTCAAGTTGATTGTATCATCATTTGAAGATCTGGTTGACAAATCTAGTCGTTCCTATGCTAAAAGGATATCTATCCTTGAAACTGTGGCTAAGGTCAGGTCATGTGTTGTGATGTTGGATCTTGAGTGTGATGCACTTCTTATTGAGATGTTCCAGCATTTCCTCAAGGCTATAAGGGACCATCATTCAGGGAATGTATTTTCATCTATGGAGAACATAATGACCCTTGTTTTAGAAGAAAGCGAGGATATACCTTCAGAGATGCTTTCACCAATCCTACATTCTGTTAAAAAGGATGATGAGATTTCCCAAGTATCACGGAGGTTGGCAGAACAAGTTCTCAGTAACTGTGCTAGCAAGCTCAAAACTTATCTGACCGAAGCAGTGAAATCGTCGGGTGTCCCTCTAGATAAGTATAGTAACATAGTGGCTTCGATATGTGAAGGGACATTCAGTGCTTTGCAGCAAGACCAAGTTGTTGCAAATGAAAAAGAAGATAGTCAAGGTCATATAAAAAGGGAAACGGAAGTAGAGAAGGCAGCAGAAATTTCTACCCCTGAGCGAACTGATGCACCTAAGGATGAATCTGGTAAGTCTGGAGTTAGCAATGGTGTCGCGCAACAGAATGATTCTTCGGTTGATACTGATTCCATGAAGAAGCAAGACGATACGGGTGCCAAAGATGAGCCGCAGCAACTTGATAATCCTAGAAACACTGACTTGAATAATACTACTGAAGAGAAGCCTGATGTTGAACATCAAATTGAGGAAAAGGAAAACGAATCTAGTTCTGTCAAACAGGCGGATTTATCAAAAGATTCAGATATCAAAGAAGAGACTGAACCTGCAGAACTCCTGGACAGCAAGGATGTGTTAACTTCGCCTCCTGTTGATTCATCTGTTACCGCAGCCACCTCTTCTGAAAATGAAAAGAATAAAAGTGTGCAGATTTTACCATCTAAGACATCAGGAGATGAAACTGCCAATGTCAGTTCTCCGTCAATGGCTGAGGAACTTCCTGAGCAAAGCGTCCCTAAGAAGACTGCAAACCAGAAGAAAAAGGAGAGCTCGACAGAGGAGGTCAAACCTTCTGCTTCTATTGCTACCGAAGAAGTTTCTGAAGAACCAAACACGTCTGAACCTCAGGTGACAAAAAAGTCTGGAAAGAAGGTTGCTTCGTCAAGTAAAACAAAGCCTACTGTTCCTCCTTCAAAGAAAAGCACCTCTGAGACAAAAGTAGCCAAGCAGTCAGAGAAAAAGGTAGTTGGGAGTGATAATGCACAAGAATCCACAAAGCCAAAAGAGGAAAAGAAAAAACCAGGACGTGGGAAAGCCATTGATGAGGAGTCATTACACACTTCATCTGGTGATAATGAAAAACCAGCTGTTTCCTCCGGAAAGCTAGCCTCAAAATCAAAGAAAGAAGCGAAGCAAACGGTAGAAGAAAGTCCTAATTCAAACACAAAGAGAAAACGAAGTTTAGGCCAAGGGAAGGCATCTGGTGAAAGTTTAGTTGGATCGAGGATCAAAGTCTGGTGGCCTATGGATCAAGCGTACTATAAAGGTGTGGTCGAGTCATATGATGCTGCAAAGAAGAAACATCTGGTTATCTATGATGATGGAGATCAAGAAATCTTGTATCTCAAGAATCAGAAGTGGAGTCCTCTGGATGAATCAGAATTGTCACAGGATGAAGAAGCTGCTGATCAGACGGGTCAAGAGGAAGATGCCTCTACAGTGCCCCTGACGAAGAAAGCTAAGACAGGCAAGCAATCAAAGATGGACAACTCATCAGCTAAAAAGGGTAGTGGAGCTGGATCAAGCAAGGCTAAAGCTACTCCTGCTTCCAAGTCCAGCAAGACGTCCCAGGATGACAAAACAGCGAGCAAATCGAAGGATTCAAAGGAAGCTAGCAGAGAAGAGGAGGCGAGCTCTGAGGAGGAGAGCGAGGAAGAGGAACCCCCCAAAACCGTTGGTAAATCAGGAAGCAGCAGGTCGAAGAAAGATATAAGCAGCGTATCGAAATCTGGGAAATCTAAAGCTTCATCCAAGAAAAAGGAAGAGCCCTCCAAGGCAACAACTTCTTCAAAATCCAAGTCGGGACCTGTGAAATCTGTACCTGCCAAAAGCAAGACAGGAAAGGGTAAAGCAAAATCTGGTTCTGCGTCTACACCTGCTTCGAAGGCCAAAGAGAGCGCTTCCGAGTCAGAATCTGAAGAGACACCCAAGGAGCCAGAACCAGCAACTAAAGCGAAATCAGGCAAGTCACAGGGGAGTCAATCAAAGTCCGGTAAGAAGAGGAAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

873

Amino Acids

94.21

Weight (kDa)

5.52

Isoelectric Point (pI)

59.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 230 3.7e-55 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2494
AasI GACNNNNNNGTC 1 cut(s) 1468
AatII GACGTC 1 cut(s) 2177
Acc36I ACCTGC 4 cut(s) 1165, 2295, 2440, 2494
AccB1I GGYRCC 1 cut(s) 986
AccB7I CCANNNNNTGG 1 cut(s) 1637
AccI GTMKAC 1 cut(s) 2480
AccII CGCG 1 cut(s) 929
AccIII TCCGGA 1 cut(s) 1706
AciI CCGC 5 cut(s) 65, 122, 1001, 1115, 1218
AclWI GGATC 5 cut(s) 438, 1837, 1844, 1866, 2137
AcsI RAATTY 1 cut(s) 858
AcuI CTGAAG 4 cut(s) 552, 1068, 1452, 2547
AcyI GRCGYC 1 cut(s) 2174
AfaI GTAC 2 cut(s) 1868, 2430
AfeI AGCGCT 1 cut(s) 2509
AfiI CCNNNNNNNGG 4 cut(s) 124, 304, 1637, 1804
AflIII ACRYGT 1 cut(s) 1443
AjiI CACGTC 2 cut(s) 1446, 1637
AjnI CCWGG 4 cut(s) 117, 1167, 1630, 2178
AjuI GAANNNNNNNTTGG 4 cut(s) 577, 609, 1809, 1841
Alw21I GWGCWC 3 cut(s) 24, 1382, 2246
Alw26I GTCTC 3 cut(s) 1142, 1535, 2525
AlwI GGATC 5 cut(s) 438, 1837, 1844, 1866, 2137
AlwNI CAGNNNCTG 2 cut(s) 660, 2525
Ama87I CYCGRG 1 cut(s) 23
Aor13HI TCCGGA 1 cut(s) 1706
Aor51HI AGCGCT 1 cut(s) 2509
AoxI GGCC 3 cut(s) 1795, 1850, 2496
ApeKI GCWGC 9 cut(s) 239, 775, 851, 1003, 1220, 1898, 2012, 2301, 2325
ApoI RAATTY 1 cut(s) 858
ArsI GACNNNNNNTTYG 6 cut(s) 92, 124, 219, 251, 2393, 2425
Asp700I GAANNNNTTC 1 cut(s) 648
AspLEI GCGC 2 cut(s) 931, 2510
AspS9I GGNCC 2 cut(s) 490, 2414
AsuHPI GGTGA 5 cut(s) 129, 573, 1471, 1691, 1826
AsuII TTCGAA 1 cut(s) 2492
AsuNHI GCTAGC 3 cut(s) 665, 1714, 2222
AvaI CYCGRG 1 cut(s) 23
AvaII GGWCC 2 cut(s) 490, 2414
AxyI CCTNAGG 2 cut(s) 888, 1455
BaeGI GKGCMC 1 cut(s) 2055
BanI GGYRCC 1 cut(s) 986
BanII GRGCYC 4 cut(s) 24, 1382, 2246, 2379
BbsI GAAGAC 1 cut(s) 1358
Bbv12I GWGCWC 3 cut(s) 24, 1382, 2246
BbvCI CCTCAGC 1 cut(s) 1320
BbvI GCAGC 9 cut(s) 226, 787, 863, 1015, 1232, 1885, 1999, 2313, 2337
BccI CCATC 4 cut(s) 501, 1276, 1925, 2086
BcgI CGANNNNNNTGC 6 cut(s) 684, 718, 907, 941, 968, 1002
BciT130I CCWGG 4 cut(s) 119, 1169, 1632, 2180
BciVI GTATCC 1 cut(s) 124
BclI TGATCA 1 cut(s) 2017
BcoDI GTCTC 3 cut(s) 1142, 1535, 2525
BfaI CTAG 7 cut(s) 357, 666, 719, 1020, 1098, 1715, 2223
BfmI CTRYAG 2 cut(s) 1158, 2046
BfoI RGCGCY 1 cut(s) 2511
BfuAI ACCTGC 4 cut(s) 1165, 2295, 2440, 2494
BfuI GTATCC 1 cut(s) 124
BglII AGATCT 1 cut(s) 340
Bme1390I CCNGG 4 cut(s) 119, 1169, 1632, 2180
Bme18I GGWCC 2 cut(s) 490, 2414
BmeT110I CYCGRG 1 cut(s) 23
BmgBI CACGTC 2 cut(s) 1446, 1637
BmgT120I GGNCC 2 cut(s) 490, 2414
BmiI GGNNCC 5 cut(s) 491, 988, 2271, 2415, 2544
BmrFI CCNGG 4 cut(s) 119, 1169, 1632, 2180
BmsI GCATC 8 cut(s) 255, 268, 433, 564, 871, 1817, 1885, 2029
BmtI GCTAGC 3 cut(s) 669, 1718, 2226
BpiI GAAGAC 1 cut(s) 1358
BplI GAGNNNNNCTC 4 cut(s) 74, 106, 2228, 2260
BpmI CTGGAG 1 cut(s) 930
Bpu10I CCTNAGC 4 cut(s) 402, 870, 1320, 1332
Bpu14I TTCGAA 1 cut(s) 2492
BpuEI CTTGAG 3 cut(s) 455, 461, 1940
BsaBI GATNNNNATC 2 cut(s) 383, 1935
BsaHI GRCGYC 1 cut(s) 2174
BsaJI CCNNGG 5 cut(s) 117, 1798, 2178, 2382, 2538
BsaWI WCCGGW 2 cut(s) 1706, 2600
BsaXI ACNNNNNCTCC 4 cut(s) 1180, 1210, 1501, 1531
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 304, 1637, 1804
Bse21I CCTNAGG 2 cut(s) 888, 1455
Bse3DI GCAATG 1 cut(s) 925
Bse8I GATNNNNATC 2 cut(s) 383, 1935
BseAI TCCGGA 1 cut(s) 1706
BseBI CCWGG 4 cut(s) 119, 1169, 1632, 2180
BseDI CCNNGG 5 cut(s) 117, 1798, 2178, 2382, 2538
BseGI GGATG 7 cut(s) 613, 898, 1186, 1987, 2008, 2188, 2357
BseJI GATNNNNATC 2 cut(s) 383, 1935
BseLI CCNNNNNNNGG 4 cut(s) 124, 304, 1637, 1804
BseMI GCAATG 1 cut(s) 925
BseMII CTCAG 7 cut(s) 667, 861, 1311, 1323, 1469, 1530, 2238
BseRI GAGGAG 5 cut(s) 1403, 1670, 2249, 2264, 2267
BseSI GKGCMC 1 cut(s) 2055
BseXI GCAGC 9 cut(s) 226, 787, 863, 1015, 1232, 1885, 1999, 2313, 2337
BseYI CCCAGC 1 cut(s) 44
BsgI GTGCAG 1 cut(s) 1277
Bsh1236I CGCG 1 cut(s) 929
BshFI GGCC 3 cut(s) 1797, 1852, 2498
BshNI GGYRCC 1 cut(s) 986
BsiHKAI GWGCWC 3 cut(s) 24, 1382, 2246
BsiHKCI CYCGRG 1 cut(s) 23
BsiSI CCGG 2 cut(s) 1707, 2601
BslFI GGGAC 6 cut(s) 503, 698, 772, 1328, 2161, 2427
BslI CCNNNNNNNGG 4 cut(s) 124, 304, 1637, 1804
BsmAI GTCTC 3 cut(s) 1142, 1535, 2525
BsmFI GGGAC 6 cut(s) 503, 698, 772, 1328, 2161, 2427
BsmI GAATGC 2 cut(s) 163, 208
BsnI GGCC 3 cut(s) 1797, 1852, 2498
BsoBI CYCGRG 1 cut(s) 23
Bsp119I TTCGAA 1 cut(s) 2492
Bsp1286I GDGCHC 5 cut(s) 24, 1382, 2055, 2246, 2379
Bsp13I TCCGGA 1 cut(s) 1706
Bsp143I GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
BspACI CCGC 5 cut(s) 65, 122, 1001, 1115, 1218
BspANI GGCC 3 cut(s) 1797, 1852, 2498
BspCNI CTCAG 7 cut(s) 666, 862, 1312, 1324, 1468, 1531, 2239
BspEI TCCGGA 1 cut(s) 1706
BspFNI CGCG 1 cut(s) 929
BspLI GGNNCC 5 cut(s) 491, 988, 2271, 2415, 2544
BspMAI CTGCAG 1 cut(s) 1162
BspMI ACCTGC 4 cut(s) 1165, 2295, 2440, 2494
BspOI GCTAGC 3 cut(s) 669, 1718, 2226
BspPI GGATC 5 cut(s) 438, 1837, 1844, 1866, 2137
BspQI GCTCTTC 1 cut(s) 2367
BspT104I TTCGAA 1 cut(s) 2492
BspT107I GGYRCC 1 cut(s) 986
BsrDI GCAATG 1 cut(s) 925
BssECI CCNNGG 5 cut(s) 117, 1798, 2178, 2382, 2538
BssMI GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
BssNI GRCGYC 1 cut(s) 2174
BssT1I CCWWGG 3 cut(s) 1798, 2382, 2538
Bst2UI CCWGG 4 cut(s) 119, 1169, 1632, 2180
Bst4CI ACNGT 7 cut(s) 135, 397, 662, 1513, 1750, 2050, 2284
Bst6I CTCTTC 9 cut(s) 206, 1044, 1140, 1234, 2226, 2259, 2367, 2523, 2603
BstACI GRCGYC 1 cut(s) 2174
BstBI TTCGAA 1 cut(s) 2492
BstC8I GCNNGC 8 cut(s) 244, 667, 671, 1716, 2081, 2197, 2224, 2242
BstENI CCTNNNNNAGG 1 cut(s) 122
BstF5I GGATG 7 cut(s) 613, 898, 1186, 1987, 2008, 2188, 2357
BstFNI CGCG 1 cut(s) 929
BstH2I RGCGCY 1 cut(s) 2511
BstHHI GCGC 2 cut(s) 931, 2510
BstKTI GATC 8 cut(s) 343, 433, 1832, 1839, 1861, 1939, 2020, 2132
BstMAI GTCTC 3 cut(s) 1142, 1535, 2525
BstMBI GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
BstMWI GCNNNNNNNGC 6 cut(s) 239, 278, 1412, 2153, 2495, 2561
BstNI CCWGG 4 cut(s) 119, 1169, 1632, 2180
BstSCI CCNGG 4 cut(s) 117, 1167, 1630, 2178
BstSFI CTRYAG 2 cut(s) 1158, 2046
BstSLI GKGCMC 1 cut(s) 2055
BstUI CGCG 1 cut(s) 929
BstV1I GCAGC 9 cut(s) 226, 787, 863, 1015, 1232, 1885, 1999, 2313, 2337
BstV2I GAAGAC 1 cut(s) 1358
BstX2I RGATCY 2 cut(s) 340, 430
BstYI RGATCY 2 cut(s) 340, 430
Bsu36I CCTNAGG 2 cut(s) 888, 1455
BsuI GTATCC 1 cut(s) 124
BsuRI GGCC 3 cut(s) 1797, 1852, 2498
BtrI CACGTC 2 cut(s) 1446, 1637
BtsCI GGATG 7 cut(s) 613, 898, 1186, 1987, 2008, 2188, 2357
BtsI GCAGTG 1 cut(s) 702
BtsIMutI CAGTG 5 cut(s) 256, 702, 772, 1026, 2055
BveI ACCTGC 4 cut(s) 1165, 2295, 2440, 2494
Cac8I GCNNGC 8 cut(s) 244, 667, 671, 1716, 2081, 2197, 2224, 2242
CaiI CAGNNNCTG 2 cut(s) 660, 2525
CfoI GCGC 2 cut(s) 931, 2510
Cfr13I GGNCC 2 cut(s) 490, 2414
CseI GACGC 2 cut(s) 1330, 2466
Csp6I GTAC 2 cut(s) 1867, 2429
CviAII CATG 2 cut(s) 414, 964
CviQI GTAC 2 cut(s) 1867, 2429
DpnI GATC 8 cut(s) 342, 432, 1831, 1838, 1860, 1938, 2019, 2131
DpnII GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
DrdI GACNNNNNNGTC 1 cut(s) 1468
DseDI GACNNNNNNGTC 1 cut(s) 1468
Eam1104I CTCTTC 9 cut(s) 206, 1044, 1140, 1234, 2226, 2259, 2367, 2523, 2603
EarI CTCTTC 9 cut(s) 206, 1044, 1140, 1234, 2226, 2259, 2367, 2523, 2603
EciI GGCGGA 2 cut(s) 137, 1130
Ecl136II GAGCTC 3 cut(s) 22, 1380, 2244
Eco130I CCWWGG 3 cut(s) 1798, 2382, 2538
Eco24I GRGCYC 4 cut(s) 24, 1382, 2246, 2379
Eco32I GATATC 2 cut(s) 381, 1138
Eco47I GGWCC 2 cut(s) 490, 2414
Eco47III AGCGCT 1 cut(s) 2509
Eco53kI GAGCTC 3 cut(s) 22, 1380, 2244
Eco57I CTGAAG 4 cut(s) 552, 1068, 1452, 2547
Eco81I CCTNAGG 2 cut(s) 888, 1455
Eco88I CYCGRG 1 cut(s) 23
EcoICRI GAGCTC 3 cut(s) 22, 1380, 2244
EcoNI CCTNNNNNAGG 1 cut(s) 122
EcoO109I RGGNCCY 1 cut(s) 2414
EcoRII CCWGG 4 cut(s) 117, 1167, 1630, 2178
EcoRV GATATC 2 cut(s) 381, 1138
EcoT14I CCWWGG 3 cut(s) 1798, 2382, 2538
EcoT38I GRGCYC 4 cut(s) 24, 1382, 2246, 2379
ErhI CCWWGG 3 cut(s) 1798, 2382, 2538
FaeI CATG 2 cut(s) 417, 967
FaqI GGGAC 6 cut(s) 503, 698, 772, 1328, 2161, 2427
FatI CATG 2 cut(s) 413, 963
FauI CCCGC 1 cut(s) 72
FauNDI CATATG 1 cut(s) 1891
FbaI TGATCA 1 cut(s) 2017
FblI GTMKAC 1 cut(s) 2480
FokI GGATG 7 cut(s) 620, 905, 1193, 1994, 2015, 2195, 2344
FriOI GRGCYC 4 cut(s) 24, 1382, 2246, 2379
FspBI CTAG 7 cut(s) 357, 666, 719, 1020, 1098, 1715, 2223
GlaI GCGC 2 cut(s) 930, 2509
GsaI CCCAGC 1 cut(s) 48
GsuI CTGGAG 1 cut(s) 930
HaeII RGCGCY 1 cut(s) 2511
HaeIII GGCC 3 cut(s) 1797, 1852, 2498
HapII CCGG 2 cut(s) 1707, 2601
HgaI GACGC 2 cut(s) 1330, 2466
HhaI GCGC 2 cut(s) 931, 2510
Hin1I GRCGYC 1 cut(s) 2174
Hin1II CATG 2 cut(s) 417, 967
Hin6I GCGC 2 cut(s) 929, 2508
HinP1I GCGC 2 cut(s) 929, 2508
HincII GTYRAC 2 cut(s) 349, 1188
HindII GTYRAC 2 cut(s) 349, 1188
HindIII AAGCTT 2 cut(s) 53, 2352
HpaI GTTAAC 1 cut(s) 1188
HpaII CCGG 2 cut(s) 1707, 2601
HphI GGTGA 5 cut(s) 129, 573, 1471, 1691, 1826
Hpy166II GTNNAC 3 cut(s) 349, 1188, 2481
Hpy8I GTNNAC 3 cut(s) 349, 1188, 2481
Hpy99I CGWCG 1 cut(s) 709
HpyCH4III ACNGT 7 cut(s) 135, 397, 662, 1513, 1750, 2050, 2284
HpyCH4IV ACGT 3 cut(s) 1445, 1636, 2174
HpyF10VI GCNNNNNNNGC 6 cut(s) 239, 278, 1412, 2153, 2495, 2561
HpySE526I ACGT 3 cut(s) 1445, 1636, 2174
Hsp92I GRCGYC 1 cut(s) 2174
Hsp92II CATG 2 cut(s) 417, 967
HspAI GCGC 2 cut(s) 929, 2508
Kpn2I TCCGGA 1 cut(s) 1706
Ksp22I TGATCA 1 cut(s) 2017
KspAI GTTAAC 1 cut(s) 1188
Kzo9I GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
LguI GCTCTTC 1 cut(s) 2367
LmnI GCTCC 4 cut(s) 277, 286, 2123, 2542
Lsp1109I GCAGC 9 cut(s) 226, 787, 863, 1015, 1232, 1885, 1999, 2313, 2337
LweI GCATC 8 cut(s) 255, 268, 433, 564, 871, 1817, 1885, 2029
MaeI CTAG 7 cut(s) 357, 666, 719, 1020, 1098, 1715, 2223
MaeII ACGT 3 cut(s) 1445, 1636, 2174
MaeIII GTNAC 7 cut(s) 135, 656, 731, 1213, 1459, 1995, 2577
MalI GATC 8 cut(s) 342, 432, 1831, 1838, 1860, 1938, 2019, 2131
MboI GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
MflI RGATCY 2 cut(s) 340, 430
MhlI GDGCHC 5 cut(s) 24, 1382, 2055, 2246, 2379
MluCI AATT 4 cut(s) 858, 1074, 1765, 1991
MlyI GAGTC 6 cut(s) 140, 1667, 1895, 1981, 2525, 2596
MmeI TCCRAC 2 cut(s) 408, 1807
MroI TCCGGA 1 cut(s) 1706
MroXI GAANNNNTTC 1 cut(s) 648
MseI TTAA 2 cut(s) 600, 1187
MslI CAYNNNNRTG 1 cut(s) 213
MspA1I CMGCKG 1 cut(s) 1697
MspI CCGG 2 cut(s) 1707, 2601
MspR9I CCNGG 4 cut(s) 119, 1169, 1632, 2180
Mva1269I GAATGC 2 cut(s) 163, 208
MvaI CCWGG 4 cut(s) 119, 1169, 1632, 2180
MvnI CGCG 1 cut(s) 929
MwoI GCNNNNNNNGC 6 cut(s) 239, 278, 1412, 2153, 2495, 2561
NdeI CATATG 1 cut(s) 1891
NdeII GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
NheI GCTAGC 3 cut(s) 665, 1714, 2222
NlaIII CATG 2 cut(s) 417, 967
NlaIV GGNNCC 5 cut(s) 491, 988, 2271, 2415, 2544
NmuCI GTSAC 4 cut(s) 135, 1459, 1995, 2577
NspV TTCGAA 1 cut(s) 2492
PaeR7I CTCGAG 1 cut(s) 23
PaqCI CACCTGC 1 cut(s) 2494
PciSI GCTCTTC 1 cut(s) 2367
PctI GAATGC 2 cut(s) 163, 208
PdmI GAANNNNTTC 1 cut(s) 648
PflMI CCANNNNNTGG 1 cut(s) 1637
PfoI TCCNGGA 1 cut(s) 1167
PleI GAGTC 6 cut(s) 140, 1666, 1894, 1980, 2524, 2595
PpsI GAGTC 6 cut(s) 140, 1666, 1894, 1980, 2524, 2595
PpuMI RGGWCCY 1 cut(s) 2414
Psp124BI GAGCTC 3 cut(s) 24, 1382, 2246
Psp5II RGGWCCY 1 cut(s) 2414
Psp6I CCWGG 4 cut(s) 117, 1167, 1630, 2178
PspFI CCCAGC 1 cut(s) 44
PspGI CCWGG 4 cut(s) 117, 1167, 1630, 2178
PspN4I GGNNCC 5 cut(s) 491, 988, 2271, 2415, 2544
PspPI GGNCC 2 cut(s) 490, 2414
PspPPI RGGWCCY 1 cut(s) 2414
PstI CTGCAG 1 cut(s) 1162
PstNI CAGNNNCTG 2 cut(s) 660, 2525
PsuI RGATCY 2 cut(s) 340, 430
PvuII CAGCTG 1 cut(s) 1697
RsaI GTAC 2 cut(s) 1868, 2430
RsaNI GTAC 2 cut(s) 1867, 2429
RseI CAYNNNNRTG 1 cut(s) 213
SacI GAGCTC 3 cut(s) 24, 1382, 2246
SapI GCTCTTC 1 cut(s) 2367
SaqAI TTAA 2 cut(s) 600, 1187
Sau3AI GATC 8 cut(s) 340, 430, 1829, 1836, 1858, 1936, 2017, 2129
Sau96I GGNCC 2 cut(s) 490, 2414
SchI GAGTC 6 cut(s) 140, 1667, 1895, 1981, 2525, 2596
ScrFI CCNGG 4 cut(s) 119, 1169, 1632, 2180
SduI GDGCHC 5 cut(s) 24, 1382, 2055, 2246, 2379
SfaNI GCATC 8 cut(s) 255, 268, 433, 564, 871, 1817, 1885, 2029
SfcI CTRYAG 2 cut(s) 1158, 2046
Sfr274I CTCGAG 1 cut(s) 23
SfuI TTCGAA 1 cut(s) 2492
SinI GGWCC 2 cut(s) 490, 2414
SlaI CTCGAG 1 cut(s) 23
SmiMI CAYNNNNRTG 1 cut(s) 213
SmlI CTYRAG 4 cut(s) 23, 434, 476, 1955
SmoI CTYRAG 4 cut(s) 23, 434, 476, 1955
Sse9I AATT 4 cut(s) 858, 1074, 1765, 1991
SsiI CCGC 5 cut(s) 65, 122, 1001, 1115, 1218
SspMI CTAG 7 cut(s) 357, 666, 719, 1020, 1098, 1715, 2223
SstI GAGCTC 3 cut(s) 24, 1382, 2246
StyD4I CCNGG 4 cut(s) 117, 1167, 1630, 2178
StyI CCWWGG 3 cut(s) 1798, 2382, 2538
TaaI ACNGT 7 cut(s) 135, 397, 662, 1513, 1750, 2050, 2284
TaiI ACGT 3 cut(s) 1448, 1639, 2177
TaqII GACCGA 1 cut(s) 704
TasI AATT 4 cut(s) 858, 1074, 1765, 1991
TauI GCSGC 1 cut(s) 1003
Tru1I TTAA 2 cut(s) 600, 1187
Tru9I TTAA 2 cut(s) 600, 1187
TscAI CASTG 5 cut(s) 256, 702, 772, 1033, 2055
TseFI GTSAC 4 cut(s) 135, 1459, 1995, 2577
TseI GCWGC 9 cut(s) 239, 775, 851, 1003, 1220, 1898, 2012, 2301, 2325
Tsp45I GTSAC 4 cut(s) 135, 1459, 1995, 2577
TspGWI ACGGA 3 cut(s) 646, 851, 1299
TspRI CASTG 5 cut(s) 256, 702, 772, 1033, 2055
Van91I CCANNNNNTGG 1 cut(s) 1637
VpaK11BI GGWCC 2 cut(s) 490, 2414
XagI CCTNNNNNAGG 1 cut(s) 122
XapI RAATTY 1 cut(s) 858
XbaI TCTAGA 1 cut(s) 718
XhoI CTCGAG 1 cut(s) 23
XmiI GTMKAC 1 cut(s) 2480
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 7 cut(s) 357, 666, 719, 1020, 1098, 1715, 2223
ZraI GACGTC 1 cut(s) 2175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.