Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005705

Physical Location & Seq

Genomic Coordinates Forward (+)

44031801 .. 44040727

Gene Structure 8927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0290200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGAGCTTAGTGTTTGAAATGGATGCAAAAGAAGATGCTGAAGGACACGAAGAGGGGGGTTCGTCCCCTATTCAGGTTATATCTGAGGAGGCATGCACAGTGGCAGGAGAAGCCCCCAATAACTTGGCCAGTCCGAATATGCCGCCATTGGCACCGGGGAATGGGCATAGGCGGACCCAAAGTGATGTTTTGACCACCAAACACAGGCGCAGTCATAGCTTTCAGAGATTGAAAAACCAAATGCAGAAGGCTTGGAGATGGGGGACCAATCATGATTCCCGGCTGGCTTTCAATCCTGAGGTTTTGGCAAACCAAAAACGCCAGTGGTATCAGCTTCACTCCAAATCAAAGGGTCATGTAAATTATCAGGAGCCAACTTCACTCTTTGAGCATTTTATAATTGCGGGGCTTCATCCAGATACTAATCTTAAAAATGCCGAGGCAGCATTCATTAAAAGAAAGAGATGGGAGACGGACATGATAAGCTATGGAATTACCGACCTTAAATTACTGCAGCAGAAGGGACCTCCAGCCCCAATATTAGAACCTCAGGTACTTTTTAAATATCCTCCCGGGAAGAGGCTAGCAATGCGTTTGAAAGATTTAGCTTCCTTTTGTTTTCCTGGAGGTGTTAAGGCACGATTAATGGAGAAGACTCCATCACTAAGTGACCTTAATCAAATTGTGTATGGACAGGAGCATTTAGGCAAAGATGATTTAGCATTTATCTTTTCACTCAAGGTAGCAGACAATGCAACACTTTATGGTATTTGCCTACATGTGTTGGAAATAGTTCAGAGGCCTCCTGCTATCTTAGGCATCACATCACCTCTTCCTCATTCATCTGAAGGACTCTTCCGTTTTTTGGTTTCTGCACCTCGGTGCTACTGTCTGTTATCCAAATATCCTTTTTTTGAGTTACATTACGAGATGTTAAACAGTATCATTCAACAGGAGCGCCTGAGTCGAATAACACAACTTGCTAATGGAATGAGCCTCAATGACCATGTCCCTTCAATGCCCAAAATAGATGATGAAATGAATAATAATGAGGAGTCCCCTGAGACAGAGTCTTTTGATGATTGGATGAATTCTGCAATCCCTGTTGACAGTGCAATAGCCCGTACAGCTGTTGCTGCAGGAATTACACCTGATGATGAGACTTCAACTTCTTCACTCAAGATATGGGAACCACAGTCCCCGGAAAGTGCTTCTGCTAGTGAGGCTCCAGATTTTATTCAAGTACGCTATTTAGATAAGGATGATAGAAAGGATTCACAATGTTTTGATGACTGTGGTTCCTCAGAAACTTCAGAAAGAATATATGGAAGTCACACAAATGGCCATACTTCACGCGAGAGTCTTGGGAGTTCTGAATCTCTATTTAGAAATTGTCATACTTCTCCAGAAGTTGGGACATCTTTCTCCTCCAGGAATCGCACATTGGAGCGTTTTGGGAGTTCTGAATCTCTATTCAGTCCAGCTAGAAGCATGTCAGAGGATGATGATGATGACCTTTCCTCAACTTGTGAGCAAGATTTTAGCGATGACTTGATAATGGCATGGGCTAGGGAGAATAAAAACGATTTGCTACAGATTGTATGTGGTTTTCATGCTCTTCCTCTTCCCGAACGAGGAAGTGAGTTAGTTTTCCAACCTCTTGAACATCTACAGGCAATCCAGTATAATCGACCTCCAATTGCTGCCCTTGGTTTTGATGAAAAAAATTTAGATTCATCTGAAGATCCTGGGGTTGATGCAAAGTTGGCTGCTTCTGAGGAAGCGCTTTCACTATCACTGTGGACAACTGCTACAATTTGCCGAGTTCTCTCTGTTGAAAGTATTTTGGCATTGGTTGCGGGAGTACTACTGGAAAAGCAAGTGATATTAGTATGCCCTAATCTGGGTGTTCTATCAGCTACAGTGTTATCTCTCATACCCATGATTCGTCCATTTCAATGGCAGAGTTTAATGCTTCCTGTTCTACCAGGGAAAATGCTGGATTTTCTTGATGCCCCAGTTCCCTTCATTATTGGGATAGAACAAGTTCCTGCAGATCTAAGGAAGAAAACATCAGATCCTGTTGTAGTTAACATGCTCATGGATCAGGTGAAACTGCCTCATCACTTGCCAACATTACCACGATATAGAGATCTTGCCCTTGAACTCGCGCCAATCCATTCTAAACTGTCACTCGAAGGTTCATTTGCTAAAAAGCATCCTGTATATAGGTGCAACGAAGTGCAGGCTGAAGCTGCAGCCCAGTTTTTGAAAGTCATGAAGAACTACATTGAGTCACTTTGTTCAGAGCTAAGGTCTTACACCATAACAAGTGTACAGTCAAATAATGACAGGGTTTCGTTACTTCTCAAAGATAGCTTCATTGATTCCTTTCCTAGTAAGGACCGGTCATTTATCAAGTTGTTGGTAGACACACAAATGTTCACAGTTCTATCCGACTCTCGTCTGTCAAGCTTAGAGAATGGCAACCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

831

Amino Acids

92.74

Weight (kDa)

5.33

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
uDENN	PF03456	183 - 260	4.1e-06	uDENN domain
DENN	PF02141	605 - 698	7.1e-22	DENN (AEX-3) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005705)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31880 AT4G31880
fragaria_vesca	FvH4_2g41000 FvH4_2g41000 FvH4_2g41000 FvH4_2g41000 FvH4_2g41000
malus_domestica	MD08G1057600.v1.1 MD15G1038500.v1.1
prunus_persica	Prupe.1G392500_v2.0.a1 Prupe.1G392500_v2.0.a1 Prupe.1G392500_v2.0.a1
pyrus_communis	pycom08g04790 pycom15g03610
rosa_chinensis	RchiOBHm_Chr6g0299571
rosa_laevigata	RLG00000011410
rosa_multiflora	Rmu_sc0004064.1_g000019
rosa_roxburghii	Rroxscaffold_7G00168550
rosa_rugosa	Rorug06G0290100 Rorug06G0290200 Rorug06G0290300 Rorug06G0290400 Rorug06G0290500
rosa_samantha	Rh6AG401400 Rh6BG409800 Rh6CG415300 Rh6DG402500
rosa_wichuraiana	Rw6G035120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	398
AccB1I	GGYRCC	1 cut(s)	151
AccB7I	CCANNNNNTGG	1 cut(s)	1412
AccI	GTMKAC	1 cut(s)	2430
AccII	CGCG	2 cut(s)	1356, 2171
AciI	CCGC	4 cut(s)	143, 172, 404, 1859
AclWI	GGATC	3 cut(s)	1739, 2072, 2112
AcoI	YGGCCR	2 cut(s)	126, 1342
AcsI	RAATTY	2 cut(s)	1090, 1726
AcuI	CTGAAG	5 cut(s)	60, 867, 1296, 1761, 2271
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	5 cut(s)	555, 1126, 1245, 1866, 2337
AfeI	AGCGCT	1 cut(s)	1785
AfiI	CCNNNNNNNGG	9 cut(s)	73, 161, 204, 579, 865, 1412, 1634, 1903, 1904
AflIII	ACRYGT	1 cut(s)	778
AgeI	ACCGGT	1 cut(s)	2406
AjnI	CCWGG	4 cut(s)	622, 1430, 1747, 1987
AjuI	GAANNNNNNNTTGG	2 cut(s)	1427, 1459
AleI	CACNNNNGTG	1 cut(s)	880
Alw26I	GTCTC	3 cut(s)	464, 1058, 1154
AlwI	GGATC	3 cut(s)	1739, 2072, 2112
AlwNI	CAGNNNCTG	1 cut(s)	2081
Ama87I	CYCGRG	1 cut(s)	572
Aor51HI	AGCGCT	1 cut(s)	1785
AoxI	GGCC	3 cut(s)	126, 800, 1342
ApeKI	GCWGC	7 cut(s)	443, 514, 1136, 1703, 1769, 2255, 2258
ApoI	RAATTY	2 cut(s)	1090, 1726
AseI	ATTAAT	1 cut(s)	644
AsiGI	ACCGGT	1 cut(s)	2406
Asp700I	GAANNNNTTC	3 cut(s)	792, 1273, 2046
AspLEI	GCGC	4 cut(s)	210, 960, 1786, 2173
AspS9I	GGNCC	4 cut(s)	174, 264, 524, 2404
AsuC2I	CCSGG	5 cut(s)	156, 280, 573, 574, 1202
AsuHPI	GGTGA	2 cut(s)	819, 2122
AsuNHI	GCTAGC	1 cut(s)	583
AvaI	CYCGRG	1 cut(s)	572
AvaII	GGWCC	4 cut(s)	174, 264, 524, 2404
AxyI	CCTNAGG	2 cut(s)	297, 549
BalI	TGGCCA	2 cut(s)	128, 1344
BanI	GGYRCC	1 cut(s)	151
BbsI	GAAGAC	1 cut(s)	659
BbvI	GCAGC	7 cut(s)	455, 526, 1123, 1690, 1756, 2242, 2270
BccI	CCATC	3 cut(s)	252, 459, 667
BciT130I	CCWGG	4 cut(s)	624, 1432, 1749, 1989
BcnI	CCSGG	5 cut(s)	156, 280, 573, 574, 1202
BcoDI	GTCTC	3 cut(s)	464, 1058, 1154
BfaI	CTAG	5 cut(s)	584, 1218, 1485, 1569, 2397
BfmI	CTRYAG	7 cut(s)	512, 1137, 1592, 1670, 1920, 2052, 2256
BfoI	RGCGCY	2 cut(s)	961, 1787
BglII	AGATCT	2 cut(s)	2056, 2152
BisI	GCNGC	8 cut(s)	143, 444, 515, 1137, 1704, 1770, 2256, 2259
BlsI	GCNGC	8 cut(s)	144, 445, 516, 1138, 1705, 1771, 2257, 2260
BmcAI	AGTACT	1 cut(s)	1866
Bme1390I	CCNGG	9 cut(s)	156, 280, 573, 574, 624, 1202, 1432, 1749, 1989
Bme18I	GGWCC	4 cut(s)	174, 264, 524, 2404
BmeT110I	CYCGRG	1 cut(s)	572
BmgT120I	GGNCC	4 cut(s)	174, 264, 524, 2404
BmiI	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
BmrFI	CCNGG	9 cut(s)	156, 280, 573, 574, 624, 1202, 1432, 1749, 1989
BmrI	ACTGGG	2 cut(s)	2012, 2257
BmsI	GCATC	6 cut(s)	13, 25, 828, 1747, 2002, 2227
BmtI	GCTAGC	1 cut(s)	587
BmuI	ACTGGG	2 cut(s)	2012, 2257
BoxI	GACNNNNGTC	1 cut(s)	2463
BpiI	GAAGAC	1 cut(s)	659
BpmI	CTGGAG	5 cut(s)	513, 645, 1212, 1389, 1414
Bpu10I	CCTNAGC	1 cut(s)	2312
BpuEI	CTTGAG	2 cut(s)	722, 1163
BpuMI	CCSGG	5 cut(s)	156, 280, 573, 574, 1202
BsaBI	GATNNNNATC	1 cut(s)	423
BsaJI	CCNNGG	8 cut(s)	155, 438, 572, 878, 1200, 1708, 1748, 1988
BsaWI	WCCGGW	1 cut(s)	2406
Bsc4I	CCNNNNNNNGG	9 cut(s)	73, 161, 204, 579, 865, 1412, 1634, 1903, 1904
Bse118I	RCCGGY	1 cut(s)	2406
Bse1I	ACTGG	6 cut(s)	129, 322, 1681, 1875, 2018, 2263
Bse21I	CCTNAGG	2 cut(s)	297, 549
Bse3DI	GCAATG	1 cut(s)	594
Bse8I	GATNNNNATC	1 cut(s)	423
BseBI	CCWGG	4 cut(s)	624, 1432, 1749, 1989
BseDI	CCNNGG	8 cut(s)	155, 438, 572, 878, 1200, 1708, 1748, 1988
BseGI	GGATG	6 cut(s)	28, 412, 1092, 1267, 1507, 2218
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	9 cut(s)	73, 161, 204, 579, 865, 1412, 1634, 1903, 1904
BseMI	GCAATG	1 cut(s)	594
BseMII	CTCAG	7 cut(s)	75, 288, 563, 953, 1053, 1317, 1767
BseNI	ACTGG	6 cut(s)	129, 322, 1681, 1875, 2018, 2263
BseRI	GAGGAG	3 cut(s)	101, 1067, 1417
BseXI	GCAGC	7 cut(s)	455, 526, 1123, 1690, 1756, 2242, 2270
BsgI	GTGCAG	2 cut(s)	858, 2264
Bsh1236I	CGCG	2 cut(s)	1356, 2171
BshFI	GGCC	3 cut(s)	128, 802, 1344
BshNI	GGYRCC	1 cut(s)	151
BshTI	ACCGGT	1 cut(s)	2406
BsiHKCI	CYCGRG	1 cut(s)	572
BsiSI	CCGG	5 cut(s)	155, 280, 573, 1202, 2407
BslFI	GGGAC	7 cut(s)	49, 277, 537, 995, 1042, 1183, 1429
BslI	CCNNNNNNNGG	9 cut(s)	73, 161, 204, 579, 865, 1412, 1634, 1903, 1904
BsmAI	GTCTC	3 cut(s)	464, 1058, 1154
BsmBI	CGTCTC	1 cut(s)	464
BsmFI	GGGAC	7 cut(s)	49, 277, 537, 995, 1042, 1183, 1429
BsmI	GAATGC	1 cut(s)	446
BsnI	GGCC	3 cut(s)	128, 802, 1344
BsoBI	CYCGRG	1 cut(s)	572
Bsp1407I	TGTACA	1 cut(s)	2335
Bsp143I	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
BspACI	CCGC	4 cut(s)	143, 172, 404, 1859
BspANI	GGCC	3 cut(s)	128, 802, 1344
BspCNI	CTCAG	7 cut(s)	76, 289, 562, 954, 1054, 1316, 1768
BspFNI	CGCG	2 cut(s)	1356, 2171
BspHI	TCATGA	2 cut(s)	271, 2277
BspLI	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
BspMAI	CTGCAG	4 cut(s)	516, 1141, 2056, 2260
BspOI	GCTAGC	1 cut(s)	587
BspPI	GGATC	3 cut(s)	1739, 2072, 2112
BspQI	GCTCTTC	1 cut(s)	1623
BspT107I	GGYRCC	1 cut(s)	151
BsrDI	GCAATG	1 cut(s)	594
BsrFI	RCCGGY	1 cut(s)	2406
BsrGI	TGTACA	1 cut(s)	2335
BsrI	ACTGG	6 cut(s)	129, 322, 1681, 1875, 2018, 2263
BssAI	RCCGGY	1 cut(s)	2406
BssECI	CCNNGG	8 cut(s)	155, 438, 572, 878, 1200, 1708, 1748, 1988
BssMI	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
BssT1I	CCWWGG	1 cut(s)	1708
Bst2UI	CCWGG	4 cut(s)	624, 1432, 1749, 1989
Bst6I	CTCTTC	6 cut(s)	45, 572, 837, 860, 1623, 1629
BstAPI	GCANNNNNTGC	2 cut(s)	752, 1856
BstAUI	TGTACA	1 cut(s)	2335
BstC8I	GCNNGC	4 cut(s)	94, 285, 585, 2247
BstF5I	GGATG	6 cut(s)	28, 412, 1092, 1267, 1507, 2218
BstFNI	CGCG	2 cut(s)	1356, 2171
BstH2I	RGCGCY	2 cut(s)	961, 1787
BstHHI	GCGC	4 cut(s)	210, 960, 1786, 2173
BstKTI	GATC	5 cut(s)	1747, 2059, 2080, 2107, 2155
BstMAI	GTCTC	3 cut(s)	464, 1058, 1154
BstMBI	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
BstNI	CCWGG	4 cut(s)	624, 1432, 1749, 1989
BstNSI	RCATGY	4 cut(s)	96, 782, 1495, 2098
BstPAI	GACNNNNGTC	1 cut(s)	2463
BstSCI	CCNGG	9 cut(s)	154, 278, 571, 572, 622, 1200, 1430, 1747, 1987
BstSFI	CTRYAG	7 cut(s)	512, 1137, 1592, 1670, 1920, 2052, 2256
BstUI	CGCG	2 cut(s)	1356, 2171
BstV1I	GCAGC	7 cut(s)	455, 526, 1123, 1690, 1756, 2242, 2270
BstV2I	GAAGAC	1 cut(s)	659
BstX2I	RGATCY	4 cut(s)	1744, 2056, 2077, 2152
BstXI	CCANNNNNNTGG	2 cut(s)	124, 1959
BstYI	RGATCY	4 cut(s)	1744, 2056, 2077, 2152
Bsu36I	CCTNAGG	2 cut(s)	297, 549
BsuRI	GGCC	3 cut(s)	128, 802, 1344
BtgZI	GCGATG	1 cut(s)	1560
BtsCI	GGATG	6 cut(s)	28, 412, 1092, 1267, 1507, 2218
BtsIMutI	CAGTG	5 cut(s)	105, 329, 1117, 1796, 1929
Cac8I	GCNNGC	4 cut(s)	94, 285, 585, 2247
CaiI	CAGNNNCTG	1 cut(s)	2081
CciI	TCATGA	2 cut(s)	271, 2277
CfoI	GCGC	4 cut(s)	210, 960, 1786, 2173
Cfr10I	RCCGGY	1 cut(s)	2406
Cfr13I	GGNCC	4 cut(s)	174, 264, 524, 2404
Cfr9I	CCCGGG	1 cut(s)	572
Csp6I	GTAC	5 cut(s)	554, 1125, 1244, 1865, 2336
CspAI	ACCGGT	1 cut(s)	2406
CviQI	GTAC	5 cut(s)	554, 1125, 1244, 1865, 2336
DpnI	GATC	5 cut(s)	1746, 2058, 2079, 2106, 2154
DpnII	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
DraI	TTTAAA	1 cut(s)	562
DraIII	CACNNNGTG	1 cut(s)	668
EaeI	YGGCCR	2 cut(s)	126, 1342
Eam1104I	CTCTTC	6 cut(s)	45, 572, 837, 860, 1623, 1629
EarI	CTCTTC	6 cut(s)	45, 572, 837, 860, 1623, 1629
EciI	GGCGGA	1 cut(s)	187
Eco130I	CCWWGG	1 cut(s)	1708
Eco147I	AGGCCT	1 cut(s)	802
Eco47I	GGWCC	4 cut(s)	174, 264, 524, 2404
Eco47III	AGCGCT	1 cut(s)	1785
Eco57I	CTGAAG	5 cut(s)	60, 867, 1296, 1761, 2271
Eco81I	CCTNAGG	2 cut(s)	297, 549
Eco88I	CYCGRG	1 cut(s)	572
EcoO109I	RGGNCCY	1 cut(s)	524
EcoRI	GAATTC	1 cut(s)	1090
EcoRII	CCWGG	4 cut(s)	622, 1430, 1747, 1987
EcoT14I	CCWWGG	1 cut(s)	1708
ErhI	CCWWGG	1 cut(s)	1708
Esp3I	CGTCTC	1 cut(s)	464
FaqI	GGGAC	7 cut(s)	49, 277, 537, 995, 1042, 1183, 1429
FauI	CCCGC	2 cut(s)	397, 1852
FblI	GTMKAC	1 cut(s)	2430
Fnu4HI	GCNGC	8 cut(s)	143, 444, 515, 1137, 1704, 1770, 2256, 2259
FokI	GGATG	6 cut(s)	35, 399, 1099, 1274, 1514, 2205
Fsp4HI	GCNGC	8 cut(s)	143, 444, 515, 1137, 1704, 1770, 2256, 2259
FspBI	CTAG	5 cut(s)	584, 1218, 1485, 1569, 2397
GlaI	GCGC	4 cut(s)	209, 959, 1785, 2172
GluI	GCNGC	8 cut(s)	143, 444, 515, 1137, 1704, 1770, 2256, 2259
GsuI	CTGGAG	5 cut(s)	513, 645, 1212, 1389, 1414
HaeII	RGCGCY	2 cut(s)	961, 1787
HaeIII	GGCC	3 cut(s)	128, 802, 1344
HapII	CCGG	5 cut(s)	155, 280, 573, 1202, 2407
HhaI	GCGC	4 cut(s)	210, 960, 1786, 2173
Hin6I	GCGC	4 cut(s)	208, 958, 1784, 2171
HinP1I	GCGC	4 cut(s)	208, 958, 1784, 2171
HincII	GTYRAC	2 cut(s)	1108, 2092
HindII	GTYRAC	2 cut(s)	1108, 2092
HindIII	AAGCTT	1 cut(s)	2473
HpaI	GTTAAC	1 cut(s)	2092
HpaII	CCGG	5 cut(s)	155, 280, 573, 1202, 2407
HphI	GGTGA	2 cut(s)	819, 2122
Hpy166II	GTNNAC	6 cut(s)	1108, 1803, 2092, 2336, 2431, 2445
Hpy8I	GTNNAC	6 cut(s)	1108, 1803, 2092, 2336, 2431, 2445
HpyAV	CCTTC	7 cut(s)	35, 241, 514, 842, 1023, 2035, 2192
HspAI	GCGC	4 cut(s)	208, 958, 1784, 2171
KspAI	GTTAAC	1 cut(s)	2092
Kzo9I	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
LguI	GCTCTTC	1 cut(s)	1623
LmnI	GCTCC	5 cut(s)	370, 697, 955, 1231, 1447
Lsp1109I	GCAGC	7 cut(s)	455, 526, 1123, 1690, 1756, 2242, 2270
LweI	GCATC	6 cut(s)	13, 25, 828, 1747, 2002, 2227
MaeI	CTAG	5 cut(s)	584, 1218, 1485, 1569, 2397
MaeIII	GTNAC	6 cut(s)	668, 918, 1331, 2190, 2295, 2361
MalI	GATC	5 cut(s)	1746, 2058, 2079, 2106, 2154
MboI	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
MfeI	CAATTG	1 cut(s)	1698
MflI	RGATCY	4 cut(s)	1744, 2056, 2077, 2152
MlsI	TGGCCA	2 cut(s)	128, 1344
MluNI	TGGCCA	2 cut(s)	128, 1344
MlyI	GAGTC	8 cut(s)	649, 846, 973, 1064, 1079, 1369, 2303, 2453
MmeI	TCCRAC	3 cut(s)	765, 1678, 2481
Mox20I	TGGCCA	2 cut(s)	128, 1344
MroXI	GAANNNNTTC	3 cut(s)	792, 1273, 2046
MscI	TGGCCA	2 cut(s)	128, 1344
MslI	CAYNNNNRTG	6 cut(s)	880, 1338, 1940, 1957, 2099, 2438
Msp20I	TGGCCA	2 cut(s)	128, 1344
MspA1I	CMGCKG	1 cut(s)	1130
MspI	CCGG	5 cut(s)	155, 280, 573, 1202, 2407
MspR9I	CCNGG	9 cut(s)	156, 280, 573, 574, 624, 1202, 1432, 1749, 1989
MunI	CAATTG	1 cut(s)	1698
Mva1269I	GAATGC	1 cut(s)	446
MvaI	CCWGG	4 cut(s)	624, 1432, 1749, 1989
MvnI	CGCG	2 cut(s)	1356, 2171
NciI	CCSGG	5 cut(s)	156, 280, 573, 574, 1202
NdeII	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
NheI	GCTAGC	1 cut(s)	583
NlaIV	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
NmeAIII	GCCGAG	2 cut(s)	463, 1847
NmuCI	GTSAC	4 cut(s)	668, 1331, 2190, 2295
NspI	RCATGY	4 cut(s)	96, 782, 1495, 2098
OliI	CACNNNNGTG	1 cut(s)	880
PaeI	GCATGC	1 cut(s)	96
PagI	TCATGA	2 cut(s)	271, 2277
PceI	AGGCCT	1 cut(s)	802
PciI	ACATGT	1 cut(s)	778
PciSI	GCTCTTC	1 cut(s)	1623
PctI	GAATGC	1 cut(s)	446
PdmI	GAANNNNTTC	3 cut(s)	792, 1273, 2046
PfeI	GAWTC	8 cut(s)	275, 1274, 1376, 1435, 1466, 1733, 1945, 2387
PflFI	GACNNNGTC	2 cut(s)	1007, 1069
PflMI	CCANNNNNTGG	1 cut(s)	1412
PfoI	TCCNGGA	2 cut(s)	622, 1430
PinAI	ACCGGT	1 cut(s)	2406
PkrI	GCNGC	8 cut(s)	144, 445, 516, 1138, 1705, 1771, 2257, 2260
PleI	GAGTC	8 cut(s)	649, 846, 972, 1063, 1078, 1368, 2302, 2453
PpsI	GAGTC	8 cut(s)	649, 846, 972, 1063, 1078, 1368, 2302, 2453
PpuMI	RGGWCCY	1 cut(s)	524
PscI	ACATGT	1 cut(s)	778
PshAI	GACNNNNGTC	1 cut(s)	2463
PshBI	ATTAAT	1 cut(s)	644
PsiI	TTATAA	1 cut(s)	398
Psp5II	RGGWCCY	1 cut(s)	524
Psp6I	CCWGG	4 cut(s)	622, 1430, 1747, 1987
PspGI	CCWGG	4 cut(s)	622, 1430, 1747, 1987
PspN4I	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
PspPI	GGNCC	4 cut(s)	174, 264, 524, 2404
PspPPI	RGGWCCY	1 cut(s)	524
PsrI	GAACNNNNNNTAC	2 cut(s)	537, 569
PstI	CTGCAG	4 cut(s)	516, 1141, 2056, 2260
PstNI	CAGNNNCTG	1 cut(s)	2081
PsuI	RGATCY	4 cut(s)	1744, 2056, 2077, 2152
PsyI	GACNNNGTC	2 cut(s)	1007, 1069
PvuII	CAGCTG	1 cut(s)	1130
RsaI	GTAC	5 cut(s)	555, 1126, 1245, 1866, 2337
RsaNI	GTAC	5 cut(s)	554, 1125, 1244, 1865, 2336
RseI	CAYNNNNRTG	6 cut(s)	880, 1338, 1940, 1957, 2099, 2438
SapI	GCTCTTC	1 cut(s)	1623
SatI	GCNGC	8 cut(s)	143, 444, 515, 1137, 1704, 1770, 2256, 2259
Sau3AI	GATC	5 cut(s)	1744, 2056, 2077, 2104, 2152
Sau96I	GGNCC	4 cut(s)	174, 264, 524, 2404
ScaI	AGTACT	1 cut(s)	1866
SchI	GAGTC	8 cut(s)	649, 846, 973, 1064, 1079, 1369, 2303, 2453
ScrFI	CCNGG	9 cut(s)	156, 280, 573, 574, 624, 1202, 1432, 1749, 1989
SfaNI	GCATC	6 cut(s)	13, 25, 828, 1747, 2002, 2227
SfcI	CTRYAG	7 cut(s)	512, 1137, 1592, 1670, 1920, 2052, 2256
SinI	GGWCC	4 cut(s)	174, 264, 524, 2404
SmaI	CCCGGG	1 cut(s)	574
SmiMI	CAYNNNNRTG	6 cut(s)	880, 1338, 1940, 1957, 2099, 2438
SmlI	CTYRAG	2 cut(s)	737, 1178
SmoI	CTYRAG	2 cut(s)	737, 1178
SphI	GCATGC	1 cut(s)	96
SseBI	AGGCCT	1 cut(s)	802
SsiI	CCGC	4 cut(s)	143, 172, 404, 1859
SspI	AATATT	1 cut(s)	540
SspMI	CTAG	5 cut(s)	584, 1218, 1485, 1569, 2397
StuI	AGGCCT	1 cut(s)	802
StyD4I	CCNGG	9 cut(s)	154, 278, 571, 572, 622, 1200, 1430, 1747, 1987
StyI	CCWWGG	1 cut(s)	1708
TaqI	TCGA	3 cut(s)	967, 1690, 2196
TatI	WGTACW	2 cut(s)	1864, 2335
TauI	GCSGC	1 cut(s)	145
TfiI	GAWTC	8 cut(s)	275, 1274, 1376, 1435, 1466, 1733, 1945, 2387
TscAI	CASTG	5 cut(s)	105, 329, 1117, 1803, 1929
TseFI	GTSAC	4 cut(s)	668, 1331, 2190, 2295
TseI	GCWGC	7 cut(s)	443, 514, 1136, 1703, 1769, 2255, 2258
Tsp45I	GTSAC	4 cut(s)	668, 1331, 2190, 2295
TspGWI	ACGGA	2 cut(s)	488, 848
TspMI	CCCGGG	1 cut(s)	572
TspRI	CASTG	5 cut(s)	105, 329, 1117, 1803, 1929
Tth111I	GACNNNGTC	2 cut(s)	1007, 1069
Van91I	CCANNNNNTGG	1 cut(s)	1412
VpaK11BI	GGWCC	4 cut(s)	174, 264, 524, 2404
VspI	ATTAAT	1 cut(s)	644
XapI	RAATTY	2 cut(s)	1090, 1726
XceI	RCATGY	4 cut(s)	96, 782, 1495, 2098
XmaI	CCCGGG	1 cut(s)	572
XmiI	GTMKAC	1 cut(s)	2430
XmnI	GAANNNNTTC	3 cut(s)	792, 1273, 2046
XspI	CTAG	5 cut(s)	584, 1218, 1485, 1569, 2397
ZrmI	AGTACT	1 cut(s)	1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.