RchiOBHm_Chr6g0299571

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0005705
Physical Location & Seq
Reverse (-)
60654793 .. 60662138
7346 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26898

Sequence Viewer

Length: 2886 bp
ATGGCATCGACCGACAATGAGCTCGAAGCACAGCTATTGGAAGCTGGGAATCAACTCCTGGAGCCGCCGTCCACCGTCGACGACCTCCTTCCTCTTCTCGACAGGGTTGAAAGTTGTCTATCAAAGGTAGAGCAATCACCAAACAAGTCAATGCAAGCCGCACTTTCACCATCGCAGAAGGCGTTGGTTGTTGATCAACTTTTAAGGCATTCAGATCCTGATGTCAAAGTTTCAGTTGCGTCTTGCATCAGTGAGATAACAAGAATAACAGCACCTGATGCACCATATGATGATGACCAAATGAAGGAGGTCTTTCAGCTTATTGTATCCTCATTTGAAAATTTAGATGACAAGTCCAGTCGATCATACACAAAGAGGACATCCATTCTTGAAACTGTTGCAAAGGTCAGGTCTTGTGTTGTAATGTTGGATCTTGAATGCGATGCATTGATCGTTGAGATGTTCCAGCATTTTCTCAAGGCAATAAGGGATTATCACCCAGAGAATGTTTTCTCATCAATGGAGACAATTATGACCCTTGTTATAGAAGAAAGTGAAGACATATCTTTTGAACTTCTTTCTCCCTTATTAGCTAGTGTGAAAAATGATGATGAGGACATTTTACCAATTTCTCGGAAGTTGGGGGAAAGAGTAATTGAAAACTCCGCTATTAAACTTAAGCCCCACCTGGCACAGGAAGTAGAAACCCATGGCATTGCATTAGGTGATTACAGTAAAGTAGTAGCTTCGATATGCCAAGAGACAGCTGGTGACACTGAGCAGAATGAAGTGCACGACGACGAAGATGTGGAGGACAAGTCAACAATCCGGGAATCTTCGGAAGAGGCAGTCCAGGTGGATAAAGAAAATTCCACCGCAGCAGTTTCTTCTGAACAAGTTGATCCTGTTATTGATGGATCCTCAAAGGTAGTTATGAATAATGGTGGTGCAGCAACTGGGGAAGATGAATGTTCGGCTGATTTGAACTCTTTAAAGAAGCAAGAGCAGGGTGAAGATACCGAGGAAGTCAAAGGTCCAAATACATCAAGTGTTGCTGAACCTGATAGTTTGGAGACTGAGAAGGCTGTTGATGCAAAACAAATGCCAGAAGAAGTTAGCGAGGATAAAGATAAGGATTCTAATTTGTCAACAGCACAGCCTGCAGACAGTCCTCAAGCTGATAATGAGGAAGAAACCGAGGCACTTCCGCCCCATAAAAGTGGCTCTGAAGATGCTCCCAGTTCACCTCGTGAGGTTCCTGATGTGGAGGCAGCTGTGCCTTCAGAAAATGAGAAAGGGTCGGATATAAATCTCTCCACTGCATTGGAGAAGGAATCAACTGATGTTGCTCCCCCATCCCCAAGTGGGAGCCTTCCTGATGAAAGTCGTCCCAAAAAGGCTGGACGACATAAGAAGAAAGATACTTCTAATAAAGAGGCTACACCTGTTACTGATGATGAATCCAAAAGGGCAACTGATGGAACAAGTGATTCAGAATTAAGATCAAGTAAGCACTCTGGGAAAAAGGTCTCTGCTGGGGGTTCTAATGAGAATAAAAGTCCCATTGTGGTGGATGCACCTAGAAAGGAAAGTGGCACTGCTAGTGATTCAGAGGTAAAACAGAAGTCATCTAAGAAGGTTTCTACTGGGAATTCTAAGGAGAATAATACTTCAGTTGTGGTAGATGCACCAAGAAAGGAAAGTAGCAGCACAAGTGATTCAGAGGCAAGACAGAAGTTAGCTAAGAAGGTTGATGGAAGCAATAAGACTAGTGATGAGTCTTCTTTGAAGCAGCAAGAAGATAAGAAGAAGCGTGCACGCAGTAAAGTTTCTTCAAGAAGAAGCTCAACAAAATCCTCGGCCATGGAAGTTGACAAAGAGATATTGTCGACACCCAAGTCAAAATCTACCAAGAATGAACTTCCATTGGAGGAGACTCCTAAGACAAATTCCAAGAGGAAGCGTCCTTTGGAAAAAGAAAAGCAATCTGGTGTAAAAGAGTTTGATGACACTGAGGTGATTGGTTCAAAGATAAAAGTTTGGTGGCCAGCGGATCGCATGTATTATAAAGGTGTTGTCCATTCTTTTGATTCTGTTAAAAAGAAGCATGTGGTGAAATATAATGATGGAGATCAGGAAATTTTGAATCTTAAAAGAGAGAAATGGCTGTATGTAGAAGGTGACTCTGAATCAGATGGGGAGCAGGAAAATGATGAGTCGAGTCACGATGGCTCTTCTGAACTGCCCCTGAAGAAGAAAGTGAAAAGTAATCGTGATGGATCAACTAAGAAAGAAAAGATGGATGCTACACCCAAATCGGGTGGAGGAGCTTCCTCCAGCAAATCAAAAGGCAGAACCACAAAGTCTGGTCGTAAGCAGAGAGACAGCAGTAAACCTGATGGCAGATCCAAAGGTGATACATCCAAGGCTGTTGGCAAAACAGATGATGATCGTGTTGGAAAATTAAAGGATCAAACTCCAAAAAGTGGTGGTAAATCAGTGGATGTTGCTCAGAAGACATCCAGCAAATCAAAGAACAATGAGTCCCAGACACCTAAGAGTAGCAAATCCAAGGAGGATGATAGCAACACCCAAAGAGCTTCAATTAAGTCCAAGCAAGACACGCAGAAGGCTGGGAAGTCAAATCAAGGCACACCAAAGACTAGTGCCTCCACTCCCAAGGGTAAATACTCTCTGAGTAGTAGCAAAGCAAATGGCAAGGTGAAATCTGTTTCAAAAGCTAGAGAGAGTGAGGATATGGAGGAGGACTCTACTGATTCGGAAAAAGCACCAGAAAGGACCAAGGGAAAGTCAACAAGTTCATCTAAGGCACAGGGAAGCCAGACCAAGTCTGGTAAGAAGCGAAGGAGAGGAACCAAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

961

Amino Acids

104.34

Weight (kDa)

5.48

Isoelectric Point (pI)

50.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 232 1.9e-54 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2067
AasI GACNNNNNNGTC 1 cut(s) 1897
AccB7I CCANNNNNTGG 1 cut(s) 2486
AccI GTMKAC 2 cut(s) 78, 1889
AciI CCGC 6 cut(s) 65, 159, 666, 876, 1208, 2051
AclWI GGATC 9 cut(s) 209, 438, 896, 912, 925, 2061, 2287, 2400, 2478
AcoI YGGCCR 2 cut(s) 1860, 2045
AcsI RAATTY 5 cut(s) 340, 868, 1651, 1948, 2139
AcuI CTGAAG 4 cut(s) 1248, 1266, 1656, 2270
AdeI CACNNNGTG 1 cut(s) 1250
AfiI CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
AflII CTTAAG 1 cut(s) 677
AhlI ACTAGT 2 cut(s) 1769, 2663
AjnI CCWGG 3 cut(s) 57, 687, 852
AjuI GAANNNNNNNTTGG 2 cut(s) 1952, 1984
AleI CACNNNNGTG 1 cut(s) 2015
AloI GAACNNNNNNTCC 2 cut(s) 2528, 2560
Alw21I GWGCWC 3 cut(s) 24, 795, 1819
Alw26I GTCTC 6 cut(s) 518, 755, 1067, 1534, 1928, 2376
Alw44I GTGCAC 2 cut(s) 791, 1815
AlwI GGATC 9 cut(s) 209, 438, 896, 912, 925, 2061, 2287, 2400, 2478
AlwNI CAGNNNCTG 3 cut(s) 218, 275, 956
AoxI GGCC 2 cut(s) 1860, 2045
ApaLI GTGCAC 2 cut(s) 791, 1815
ApeKI GCWGC 5 cut(s) 878, 950, 1271, 1707, 1792
ApoI RAATTY 5 cut(s) 340, 868, 1651, 1948, 2139
ArsI GACNNNNNNTTYG 4 cut(s) 395, 427, 551, 583
Asp700I GAANNNNTTC 1 cut(s) 509
AspS9I GGNCC 2 cut(s) 1034, 2799
AsuC2I CCSGG 1 cut(s) 830
AvaII GGWCC 2 cut(s) 1034, 2799
BaeGI GKGCMC 2 cut(s) 795, 1819
BalI TGGCCA 1 cut(s) 2047
BamHI GGATCC 1 cut(s) 917
BanII GRGCYC 1 cut(s) 24
BarI GAAGNNNNNNTAC 2 cut(s) 1816, 1848
BauI CACGAG 1 cut(s) 1248
BbsI GAAGAC 3 cut(s) 564, 1773, 2522
Bbv12I GWGCWC 3 cut(s) 24, 795, 1819
BbvI GCAGC 5 cut(s) 890, 962, 1283, 1719, 1804
BceAI ACGGC 1 cut(s) 52
BciT130I CCWGG 3 cut(s) 59, 689, 854
BciVI GTATCC 1 cut(s) 337
BclI TGATCA 1 cut(s) 193
BcnI CCSGG 1 cut(s) 830
BcoDI GTCTC 6 cut(s) 518, 755, 1067, 1534, 1928, 2376
BcuI ACTAGT 2 cut(s) 1769, 2663
BfaI CTAG 6 cut(s) 594, 1581, 1602, 1770, 2664, 2742
BfmI CTRYAG 1 cut(s) 1161
BfrI CTTAAG 1 cut(s) 677
BfuI GTATCC 1 cut(s) 337
BisI GCNGC 7 cut(s) 65, 159, 879, 951, 1272, 1708, 1793
BlsI GCNGC 7 cut(s) 66, 160, 880, 952, 1273, 1709, 1794
Bme1390I CCNGG 4 cut(s) 59, 689, 830, 854
Bme18I GGWCC 2 cut(s) 1034, 2799
BmgT120I GGNCC 2 cut(s) 1034, 2799
BmiI GGNNCC 5 cut(s) 63, 919, 1257, 1370, 2875
BmrFI CCNGG 4 cut(s) 59, 689, 830, 854
BmrI ACTGGG 3 cut(s) 966, 1233, 1656
BmsI GCATC 9 cut(s) 14, 255, 268, 433, 1081, 1222, 1564, 1675, 2293
BmuI ACTGGG 3 cut(s) 966, 1233, 1656
BpiI GAAGAC 3 cut(s) 564, 1773, 2522
BplI GAGNNNNNCTC 2 cut(s) 2753, 2785
BpmI CTGGAG 2 cut(s) 80, 2320
BpuEI CTTGAG 2 cut(s) 461, 1158
BpuMI CCSGG 1 cut(s) 830
BsaBI GATNNNNATC 3 cut(s) 1308, 2130, 2448
BsaI GGTCTC 1 cut(s) 1534
BsaJI CCNNGG 9 cut(s) 709, 1020, 1197, 1857, 1863, 2424, 2571, 2679, 2802
BsaXI ACNNNNNCTCC 4 cut(s) 53, 83, 803, 833
Bsc4I CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
Bse1I ACTGG 4 cut(s) 357, 961, 1239, 1651
Bse3DI GCAATG 1 cut(s) 714
Bse8I GATNNNNATC 3 cut(s) 1308, 2130, 2448
BseBI CCWGG 3 cut(s) 59, 689, 854
BseDI CCNNGG 9 cut(s) 709, 1020, 1197, 1857, 1863, 2424, 2571, 2679, 2802
BseGI GGATG 8 cut(s) 380, 1355, 1579, 2308, 2420, 2509, 2519, 2584
BseJI GATNNNNATC 3 cut(s) 1308, 2130, 2448
BseLI CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
BseMI GCAATG 1 cut(s) 714
BseMII CTCAG 5 cut(s) 768, 1068, 2004, 2525, 2687
BseNI ACTGG 4 cut(s) 357, 961, 1239, 1651
BseRI GAGGAG 3 cut(s) 1946, 2340, 2777
BseSI GKGCMC 2 cut(s) 795, 1819
BseXI GCAGC 5 cut(s) 890, 962, 1283, 1719, 1804
BseYI CCCAGC 3 cut(s) 44, 1535, 2633
BsgI GTGCAG 1 cut(s) 969
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 2 cut(s) 1862, 2047
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 3 cut(s) 24, 795, 1819
BsiSI CCGG 1 cut(s) 829
BslFI GGGAC 3 cut(s) 1374, 1545, 2530
BslI CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
BsmAI GTCTC 6 cut(s) 518, 755, 1067, 1534, 1928, 2376
BsmFI GGGAC 3 cut(s) 1374, 1545, 2530
BsmI GAATGC 2 cut(s) 208, 443
BsnI GGCC 2 cut(s) 1862, 2047
Bso31I GGTCTC 1 cut(s) 1534
Bsp1286I GDGCHC 3 cut(s) 24, 795, 1819
Bsp19I CCATGG 2 cut(s) 709, 1863
BspACI CCGC 6 cut(s) 65, 159, 666, 876, 1208, 2051
BspANI GGCC 2 cut(s) 1862, 2047
BspCNI CTCAG 5 cut(s) 769, 1069, 2005, 2524, 2688
BspLI GGNNCC 5 cut(s) 63, 919, 1257, 1370, 2875
BspMAI CTGCAG 1 cut(s) 1165
BspPI GGATC 9 cut(s) 209, 438, 896, 912, 925, 2061, 2287, 2400, 2478
BspQI GCTCTTC 1 cut(s) 2239
BspTI CTTAAG 1 cut(s) 677
BspTNI GGTCTC 1 cut(s) 1534
BsrDI GCAATG 1 cut(s) 714
BsrI ACTGG 4 cut(s) 357, 961, 1239, 1651
BssECI CCNNGG 9 cut(s) 709, 1020, 1197, 1857, 1863, 2424, 2571, 2679, 2802
BssSI CACGAG 1 cut(s) 1248
BssT1I CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
Bst2BI CACGAG 1 cut(s) 1248
Bst2UI CCWGG 3 cut(s) 59, 689, 854
Bst4CI ACNGT 4 cut(s) 76, 397, 734, 1169
Bst6I CTCTTC 3 cut(s) 99, 837, 2239
BstAFI CTTAAG 1 cut(s) 677
BstAPI GCANNNNNTGC 2 cut(s) 278, 1160
BstC8I GCNNGC 5 cut(s) 156, 1161, 1815, 1819, 2049
BstDSI CCRYGG 2 cut(s) 709, 1863
BstENI CCTNNNNNAGG 1 cut(s) 692
BstF5I GGATG 8 cut(s) 380, 1355, 1579, 2308, 2420, 2509, 2519, 2584
BstMAI GTCTC 6 cut(s) 518, 755, 1067, 1534, 1928, 2376
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 4 cut(s) 278, 1091, 1160, 2623
BstNI CCWGG 3 cut(s) 59, 689, 854
BstNSI RCATGY 2 cut(s) 2062, 2111
BstSCI CCNGG 4 cut(s) 57, 687, 828, 852
BstSFI CTRYAG 1 cut(s) 1161
BstSLI GKGCMC 2 cut(s) 795, 1819
BstV1I GCAGC 5 cut(s) 890, 962, 1283, 1719, 1804
BstV2I GAAGAC 3 cut(s) 564, 1773, 2522
BstX2I RGATCY 4 cut(s) 214, 430, 917, 2405
BstXI CCANNNNNNTGG 3 cut(s) 1220, 1324, 1570
BstYI RGATCY 4 cut(s) 214, 430, 917, 2405
BsuI GTATCC 1 cut(s) 337
BsuRI GGCC 2 cut(s) 1862, 2047
BtgI CCRYGG 2 cut(s) 709, 1863
BtgZI GCGATG 2 cut(s) 156, 456
BtsCI GGATG 8 cut(s) 380, 1355, 1579, 2308, 2420, 2509, 2519, 2584
BtsI GCAGTG 2 cut(s) 1317, 1596
BtsIMutI CAGTG 6 cut(s) 256, 774, 1317, 1596, 2010, 2505
Cac8I GCNNGC 5 cut(s) 156, 1161, 1815, 1819, 2049
CaiI CAGNNNCTG 3 cut(s) 218, 275, 956
Cfr13I GGNCC 2 cut(s) 1034, 2799
CseI GACGC 2 cut(s) 228, 1952
CspCI CAANNNNNGTGG 2 cut(s) 2302, 2337
CviAII CATG 4 cut(s) 710, 1864, 2059, 2108
DraI TTTAAA 1 cut(s) 993
DraIII CACNNNGTG 1 cut(s) 1250
DrdI GACNNNNNNGTC 1 cut(s) 1897
DseDI GACNNNNNNGTC 1 cut(s) 1897
EaeI YGGCCR 2 cut(s) 1860, 2045
Eam1104I CTCTTC 3 cut(s) 99, 837, 2239
EarI CTCTTC 3 cut(s) 99, 837, 2239
EciI GGCGGA 1 cut(s) 1197
Ecl136II GAGCTC 1 cut(s) 22
Eco130I CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
Eco24I GRGCYC 1 cut(s) 24
Eco31I GGTCTC 1 cut(s) 1534
Eco47I GGWCC 2 cut(s) 1034, 2799
Eco53kI GAGCTC 1 cut(s) 22
Eco57I CTGAAG 4 cut(s) 1248, 1266, 1656, 2270
EcoICRI GAGCTC 1 cut(s) 22
EcoNI CCTNNNNNAGG 1 cut(s) 692
EcoRI GAATTC 1 cut(s) 1651
EcoRII CCWGG 3 cut(s) 57, 687, 852
EcoT14I CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
EcoT22I ATGCAT 1 cut(s) 448
EcoT38I GRGCYC 1 cut(s) 24
ErhI CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
FaeI CATG 4 cut(s) 713, 1867, 2062, 2111
FalI AAGNNNNNCTT 4 cut(s) 147, 179, 296, 328
FaqI GGGAC 3 cut(s) 1374, 1545, 2530
FatI CATG 4 cut(s) 709, 1863, 2058, 2107
FauNDI CATATG 1 cut(s) 286
FbaI TGATCA 1 cut(s) 193
FblI GTMKAC 2 cut(s) 78, 1889
Fnu4HI GCNGC 7 cut(s) 65, 159, 879, 951, 1272, 1708, 1793
FokI GGATG 8 cut(s) 367, 1342, 1586, 2315, 2407, 2506, 2516, 2591
FriOI GRGCYC 1 cut(s) 24
Fsp4HI GCNGC 7 cut(s) 65, 159, 879, 951, 1272, 1708, 1793
FspBI CTAG 6 cut(s) 594, 1581, 1602, 1770, 2664, 2742
GluI GCNGC 7 cut(s) 65, 159, 879, 951, 1272, 1708, 1793
GsaI CCCAGC 3 cut(s) 48, 1539, 2637
GsuI CTGGAG 2 cut(s) 80, 2320
HaeIII GGCC 2 cut(s) 1862, 2047
HapII CCGG 1 cut(s) 829
HgaI GACGC 2 cut(s) 228, 1952
Hin1II CATG 4 cut(s) 713, 1867, 2062, 2111
HincII GTYRAC 6 cut(s) 79, 822, 1149, 1873, 1890, 2814
HindII GTYRAC 6 cut(s) 79, 822, 1149, 1873, 1890, 2814
HpaII CCGG 1 cut(s) 829
Hpy99I CGWCG 4 cut(s) 80, 83, 800, 803
HpyCH4III ACNGT 4 cut(s) 76, 397, 734, 1169
HpyF10VI GCNNNNNNNGC 4 cut(s) 278, 1091, 1160, 2623
Hsp92II CATG 4 cut(s) 713, 1867, 2062, 2111
Ksp22I TGATCA 1 cut(s) 193
LguI GCTCTTC 1 cut(s) 2239
LmnI GCTCC 6 cut(s) 61, 1240, 1354, 1368, 2200, 2327
Lsp1109I GCAGC 5 cut(s) 890, 962, 1283, 1719, 1804
LweI GCATC 9 cut(s) 14, 255, 268, 433, 1081, 1222, 1564, 1675, 2293
MaeI CTAG 6 cut(s) 594, 1581, 1602, 1770, 2664, 2742
MaeIII GTNAC 4 cut(s) 770, 1447, 2180, 2222
MflI RGATCY 4 cut(s) 214, 430, 917, 2405
MhlI GDGCHC 3 cut(s) 24, 795, 1819
MlsI TGGCCA 1 cut(s) 2047
MluNI TGGCCA 1 cut(s) 2047
MlyI GAGTC 7 cut(s) 1787, 1930, 2177, 2225, 2230, 2552, 2762
MmeI TCCRAC 3 cut(s) 408, 1281, 2437
Mox20I TGGCCA 1 cut(s) 2047
Mph1103I ATGCAT 1 cut(s) 448
MroXI GAANNNNTTC 1 cut(s) 509
MscI TGGCCA 1 cut(s) 2047
MslI CAYNNNNRTG 3 cut(s) 1218, 1568, 2015
Msp20I TGGCCA 1 cut(s) 2047
MspA1I CMGCKG 3 cut(s) 767, 1274, 2051
MspCI CTTAAG 1 cut(s) 677
MspI CCGG 1 cut(s) 829
MspR9I CCNGG 4 cut(s) 59, 689, 830, 854
Mva1269I GAATGC 2 cut(s) 208, 443
MvaI CCWGG 3 cut(s) 59, 689, 854
MwoI GCNNNNNNNGC 4 cut(s) 278, 1091, 1160, 2623
NciI CCSGG 1 cut(s) 830
NcoI CCATGG 2 cut(s) 709, 1863
NdeI CATATG 1 cut(s) 286
NlaIII CATG 4 cut(s) 713, 1867, 2062, 2111
NlaIV GGNNCC 5 cut(s) 63, 919, 1257, 1370, 2875
NmeAIII GCCGAG 1 cut(s) 1838
NmuCI GTSAC 3 cut(s) 770, 2180, 2222
NsiI ATGCAT 1 cut(s) 448
NspI RCATGY 2 cut(s) 2062, 2111
OliI CACNNNNGTG 1 cut(s) 2015
PciSI GCTCTTC 1 cut(s) 2239
PcsI WCGNNNNNNNCGW 1 cut(s) 179
PctI GAATGC 2 cut(s) 208, 443
PdmI GAANNNNTTC 1 cut(s) 509
PflFI GACNNNGTC 1 cut(s) 2848
PflMI CCANNNNNTGG 1 cut(s) 2486
PfoI TCCNGGA 2 cut(s) 57, 828
PkrI GCNGC 7 cut(s) 66, 160, 880, 952, 1273, 1709, 1794
PleI GAGTC 7 cut(s) 1786, 1930, 2177, 2224, 2229, 2551, 2762
PpsI GAGTC 7 cut(s) 1786, 1930, 2177, 2224, 2229, 2551, 2762
PsiI TTATAA 1 cut(s) 2067
Psp124BI GAGCTC 1 cut(s) 24
Psp6I CCWGG 3 cut(s) 57, 687, 852
PspFI CCCAGC 3 cut(s) 44, 1535, 2633
PspGI CCWGG 3 cut(s) 57, 687, 852
PspN4I GGNNCC 5 cut(s) 63, 919, 1257, 1370, 2875
PspPI GGNCC 2 cut(s) 1034, 2799
PstI CTGCAG 1 cut(s) 1165
PstNI CAGNNNCTG 3 cut(s) 218, 275, 956
PsuI RGATCY 4 cut(s) 214, 430, 917, 2405
PsyI GACNNNGTC 1 cut(s) 2848
PvuII CAGCTG 2 cut(s) 767, 1274
RseI CAYNNNNRTG 3 cut(s) 1218, 1568, 2015
SacI GAGCTC 1 cut(s) 24
SalI GTCGAC 2 cut(s) 77, 1888
SapI GCTCTTC 1 cut(s) 2239
SatI GCNGC 7 cut(s) 65, 159, 879, 951, 1272, 1708, 1793
Sau96I GGNCC 2 cut(s) 1034, 2799
SchI GAGTC 7 cut(s) 1787, 1930, 2177, 2225, 2230, 2552, 2762
ScrFI CCNGG 4 cut(s) 59, 689, 830, 854
SduI GDGCHC 3 cut(s) 24, 795, 1819
SfaNI GCATC 9 cut(s) 14, 255, 268, 433, 1081, 1222, 1564, 1675, 2293
SfcI CTRYAG 1 cut(s) 1161
SgrDI CGTCGACG 1 cut(s) 77
SinI GGWCC 2 cut(s) 1034, 2799
SmiMI CAYNNNNRTG 3 cut(s) 1218, 1568, 2015
SmlI CTYRAG 3 cut(s) 476, 677, 1173
SmoI CTYRAG 3 cut(s) 476, 677, 1173
SpeI ACTAGT 2 cut(s) 1769, 2663
SsiI CCGC 6 cut(s) 65, 159, 666, 876, 1208, 2051
SspMI CTAG 6 cut(s) 594, 1581, 1602, 1770, 2664, 2742
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 4 cut(s) 57, 687, 828, 852
StyI CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
TaaI ACNGT 4 cut(s) 76, 397, 734, 1169
TaqI TCGA 8 cut(s) 8, 24, 78, 99, 361, 749, 1889, 2219
TaqII GACCGA 1 cut(s) 26
TauI GCSGC 2 cut(s) 67, 161
TscAI CASTG 6 cut(s) 256, 781, 1324, 1603, 2017, 2505
TseFI GTSAC 3 cut(s) 770, 2180, 2222
TseI GCWGC 5 cut(s) 878, 950, 1271, 1707, 1792
Tsp45I GTSAC 3 cut(s) 770, 2180, 2222
TspDTI ATGAA 8 cut(s) 317, 801, 950, 981, 1395, 1473, 1932, 2811
TspRI CASTG 6 cut(s) 256, 781, 1324, 1603, 2017, 2505
Tth111I GACNNNGTC 1 cut(s) 2848
Van91I CCANNNNNTGG 1 cut(s) 2486
Vha464I CTTAAG 1 cut(s) 677
VneI GTGCAC 2 cut(s) 791, 1815
VpaK11BI GGWCC 2 cut(s) 1034, 2799
XagI CCTNNNNNAGG 1 cut(s) 692
XapI RAATTY 5 cut(s) 340, 868, 1651, 1948, 2139
XceI RCATGY 2 cut(s) 2062, 2111
XcmI CCANNNNNNNNNTGG 2 cut(s) 764, 2849
XmiI GTMKAC 2 cut(s) 78, 1889
XmnI GAANNNNTTC 1 cut(s) 509
XspI CTAG 6 cut(s) 594, 1581, 1602, 1770, 2664, 2742
Zsp2I ATGCAT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.