Rorug06G0290300

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0005705
Physical Location & Seq
Reverse (-)
44040754 .. 44044170
3417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0290300.1

Sequence Viewer

Length: 1902 bp
ATGGCGGATGACGCGGCGGAGATCTACGACGGAGCTAGAGCCGAATTTCCTCTCACATTCGGTAAGCAATCCAAATCCCAAACCCCTCTCGAAACCATCCACAATACGACCCGTCGTAACCAGAACCTTCAACAACAGCAACGACAACCACCACCCTCCTCCGCCGACCTCCCTTCTCTCTCCTCCTCCTCCAAAACCTGGCTCAATTCCCTCCGTACCGCCAAAACCCCCAACACTAACCCTAACCCTAGCGATTCTGACGCAACCCTTATCGGACCGCCTCGTCCACCGCAGCCTAATTCGGCCTCCGACGACGACGGCGATGCCCTTATCGGACCGCCGCCGCCGTCCGGGAGTGCCGAGAGCGACGACGATGGTGAGATGATTGGACCGCCGGCGCCGGCGCGGTCCAATAGGGACGATTGGGATTCCGATGCGGAAGAGGAGAACAAGTACCGGATTCCGGTGAGCAATGAGATTGTCCTGAAGGGACACACCAAGGTGGTATCGGCCCTCGCCATTGATCACACTGGGTCTAGAGTTATATCTGGTAGCTATGACTACTCTGTGAGAATGTACGATTTTCAAGGAATGAATGCAAAGTTGCAATCTTTCCGGCAGCTGGAGCCGTCTGAAGGTCATCAGGTCAGAACTATAAGCTGGAGCCCCACCGCCGACCGGTTTCTGTGTGTCACCGGCTCAGCTCAGGCAAAGATTTATGATCGTGACGGACTTACGCTAGGAGAGTTTGTCAAAGGGGACATGTATATTCGTGATCTTAAGAATACCAAGGGGCATATTACTGGATTGACCTGTGGACAGTGGCACCCTAGAAAGAAAGACGAAATCTTGACATCATCGGAGGATGGGTCACTGCGCATTTGGGATGTCAATAACTTCAATACTCAGAAACAGGTAATCAAGCCAAAACTTGCTAGGCCTGGAAGAGTTCCAGTCACCACTTGTACTTGGGATCATGAAGGACAACGAATTGCAGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAACATTAAGCCCGGATGGGGAAGTAGGCCGGACATACACGTTCAGGAAGCTCATTCAGATGATATTACTGGGCTTAAGTTTTCTAGGGATGGGAGAATCTTACTCTCAAGAAGCTGTGATGGCACTTTGAAGGTTTGGGACTTACGTCAGATGAAAGATCCTCTCAAGGTGTTTCAGGATCTCCCAAATAACTATGCACAAACCAACGTCACATTTAGTCCTGATGAGCAACTCTTTCTGACTGGAACCTCAATTGAAAGGGAGAGCACAACTGGAGGTTTACTATGCTTCTTTGATCGAGCAAAACTGGAACTTGTTTCAAAAGTTGGGATATCCCCTACTTGCAGTGTTGTGCAATGTGCCTGGCACCCAAAACTGAATCAGATCTTTGCAACATCAGGAGATAAAAGCCAAGGCGGAACTCATGTACTATATGATCCAACTCTTAGTGAAAGAGGAGCTCTTGTCTGCGTTGCACGTGCCCCTAGGAAAAAATCTGTTGATGATTTTGTGGCAAACCCAGTCATACACAACCCTCATGCTCTACCCTTATTTAGAGATCAACCAAGCCGTAAACGTGAGCGAGAAAAAACATTGAAGGATCCAGTTAAATCCCATAAGCCTGACCTTCCCATGACAGGACCAGGCTTTGGTGGAAGAGTTGGTGCAAGTAAAGGAAGCTTATTGACCCAGTACCTAATGAAGCAAGGTGGTATGATCAAGGAGACGTGGATGGACGAAGATCCAAGAGAAGCCATACTGAAGTATGCAGATGTTGCAGCAAAAGATCCAAAGTACATAGCTCCAGCTTATGCAGAAACCCAGCCTGAAACAGTTTTTGCGAAATCAGACTCTGAGGACGAGGAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

633

Amino Acids

69.85

Weight (kDa)

6.2

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 157 - 243 1.4e-06 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 159 - 236 2e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 161 - 241 5.5e-06 WDR5 beta-propeller domain
Beta-prop_EML PF23409 164 - 427 3.7e-09 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3 PF25174 165 - 234 4.9e-06 THOC3 beta-propeller domain
Beta-prop_THOC3 PF25174 214 - 305 2.5e-07 THOC3 beta-propeller domain
WD40_Gbeta PF25391 257 - 423 4.1e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 261 - 426 6.2e-22 WDR5 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 262 - 392 5e-11 TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 263 - 424 7.4e-10 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 264 - 427 1.6e-16 WDR3 first beta-propeller domain
Beta-prop_Aladin PF25460 270 - 395 6.9e-08 Aladin seven-bladed propeller
WD40_CDC20-Fz PF24807 270 - 480 1.2e-13 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 276 - 420 1.5e-11 Echinoderm microtubule-associated protein second beta-propeller
WD40_MABP1-WDR62_2nd PF24782 279 - 391 2.7e-07 MABP1/WDR62 second WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 280 - 396 4.9e-08 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 281 - 424 1.2e-07 WDR36/Utp21 first beta-propeller
WDR55 PF24796 282 - 394 8.7e-07 WDR55
WDR90_beta-prop_4th PF23342 282 - 388 4.3e-06 WDR90, 4th beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 283 - 426 3.1e-06 CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st PF24817 317 - 406 8.1e-09 WDHD1 first WD40 domain
EIF3I PF24805 318 - 409 6.6e-06 EIF3I
Beta-prop_THOC3 PF25174 319 - 480 2.2e-15 THOC3 beta-propeller domain
WD40 PF00400 355 - 390 2.1e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 986
AasI GACNNNNNNGTC 1 cut(s) 282
Acc16I TGCGCA 1 cut(s) 878
Acc36I ACCTGC 1 cut(s) 986
AccB1I GGYRCC 3 cut(s) 397, 825, 1395
AccB7I CCANNNNNTGG 2 cut(s) 198, 1679
AccII CGCG 2 cut(s) 14, 406
AclWI GGATC 8 cut(s) 981, 1181, 1215, 1460, 1625, 1638, 1766, 1811
AcsI RAATTY 1 cut(s) 44
AcuI CTGAAG 3 cut(s) 506, 654, 1811
AcvI CACGTG 1 cut(s) 1508
AcyI GRCGYC 1 cut(s) 398
AfaI GTAC 7 cut(s) 217, 455, 578, 967, 1458, 1724, 1826
AfiI CCNNNNNNNGG 9 cut(s) 198, 350, 463, 622, 635, 678, 1046, 1667, 1679
AflII CTTAAG 2 cut(s) 779, 1103
AflIII ACRYGT 2 cut(s) 762, 1066
AgeI ACCGGT 1 cut(s) 678
AgsI TTSAA 7 cut(s) 131, 587, 901, 1159, 1286, 1350, 1627
AjiI CACGTC 1 cut(s) 1758
AjnI CCWGG 4 cut(s) 197, 940, 1391, 1672
AleI CACNNNNGTG 1 cut(s) 500
Alw21I GWGCWC 2 cut(s) 1298, 1492
Alw26I GTCTC 1 cut(s) 1748
AlwI GGATC 8 cut(s) 981, 1181, 1215, 1460, 1625, 1638, 1766, 1811
AlwNI CAGNNNCTG 1 cut(s) 1883
AoxI GGCC 4 cut(s) 303, 510, 938, 1055
ApeKI GCWGC 3 cut(s) 292, 619, 1808
ApoI RAATTY 1 cut(s) 44
AsiGI ACCGGT 1 cut(s) 678
AspA2I CCTAGG 1 cut(s) 1514
AspLEI GCGC 3 cut(s) 400, 406, 879
AspS9I GGNCC 6 cut(s) 275, 335, 389, 408, 511, 1670
AsuC2I CCSGG 2 cut(s) 352, 1041
AsuHPI GGTGA 4 cut(s) 389, 478, 685, 949
AvaII GGWCC 5 cut(s) 275, 335, 389, 408, 1670
AvrII CCTAGG 1 cut(s) 1514
BaeGI GKGCMC 1 cut(s) 1513
BamHI GGATCC 1 cut(s) 1630
BanI GGYRCC 3 cut(s) 397, 825, 1395
BanII GRGCYC 2 cut(s) 668, 1492
BbrPI CACGTG 1 cut(s) 1508
Bbv12I GWGCWC 2 cut(s) 1298, 1492
BbvI GCAGC 3 cut(s) 304, 631, 1820
BccI CCATC 8 cut(s) 104, 368, 860, 1004, 1038, 1112, 1142, 1756
BceAI ACGGC 4 cut(s) 331, 334, 613, 1584
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 4 cut(s) 199, 942, 1393, 1674
BclI TGATCA 2 cut(s) 523, 1746
BcnI CCSGG 2 cut(s) 352, 1041
BcoDI GTCTC 1 cut(s) 1748
BfaI CTAG 8 cut(s) 36, 249, 537, 740, 831, 936, 1113, 1515
BfoI RGCGCY 1 cut(s) 401
BfrI CTTAAG 2 cut(s) 779, 1103
BfuAI ACCTGC 1 cut(s) 986
BglII AGATCT 2 cut(s) 21, 1413
BisI GCNGC 6 cut(s) 15, 293, 341, 344, 620, 1809
BlnI CCTAGG 1 cut(s) 1514
BlpI GCTNAGC 1 cut(s) 700
BlsI GCNGC 6 cut(s) 16, 294, 342, 345, 621, 1810
Bme1390I CCNGG 6 cut(s) 199, 352, 942, 1041, 1393, 1674
Bme18I GGWCC 5 cut(s) 275, 335, 389, 408, 1670
BmgBI CACGTC 1 cut(s) 1758
BmgT120I GGNCC 6 cut(s) 275, 335, 389, 408, 511, 1670
BmiI GGNNCC 7 cut(s) 399, 627, 665, 827, 1276, 1397, 1632
BmrFI CCNGG 6 cut(s) 199, 352, 942, 1041, 1393, 1674
BmrI ACTGGG 4 cut(s) 540, 1107, 1544, 1714
BmsI GCATC 2 cut(s) 313, 424
BmuI ACTGGG 4 cut(s) 540, 1107, 1544, 1714
BoxI GACNNNNGTC 1 cut(s) 1173
BpmI CTGGAG 4 cut(s) 644, 682, 1323, 1818
Bpu10I CCTNAGC 1 cut(s) 705
Bpu1102I GCTNAGC 1 cut(s) 700
BpuEI CTTGAG 2 cut(s) 1120, 1178
BpuMI CCSGG 2 cut(s) 352, 1041
BsaAI YACGTR 1 cut(s) 1508
BsaHI GRCGYC 1 cut(s) 398
BsaJI CCNNGG 4 cut(s) 498, 789, 1441, 1514
BsaWI WCCGGW 3 cut(s) 456, 463, 678
BsaXI ACNNNNNCTCC 8 cut(s) 437, 467, 735, 765, 854, 884, 1479, 1509
Bsc4I CCNNNNNNNGG 9 cut(s) 198, 350, 463, 622, 635, 678, 1046, 1667, 1679
Bse118I RCCGGY 4 cut(s) 394, 400, 678, 695
Bse3DI GCAATG 2 cut(s) 478, 1391
BseBI CCWGG 4 cut(s) 199, 942, 1393, 1674
BseDI CCNNGG 4 cut(s) 498, 789, 1441, 1514
BseGI GGATG 7 cut(s) 13, 96, 871, 892, 1049, 1123, 1767
BseLI CCNNNNNNNGG 9 cut(s) 198, 350, 463, 622, 635, 678, 1046, 1667, 1679
BseMI GCAATG 2 cut(s) 478, 1391
BseMII CTCAG 4 cut(s) 714, 719, 920, 1875
BseRI GAGGAG 6 cut(s) 148, 172, 175, 178, 458, 1500
BseSI GKGCMC 1 cut(s) 1513
BseXI GCAGC 3 cut(s) 304, 631, 1820
BseYI CCCAGC 1 cut(s) 1851
Bsh1236I CGCG 2 cut(s) 14, 406
Bsh1285I CGRYCG 1 cut(s) 679
BshFI GGCC 4 cut(s) 305, 512, 940, 1057
BshNI GGYRCC 3 cut(s) 397, 825, 1395
BshTI ACCGGT 1 cut(s) 678
BsiEI CGRYCG 1 cut(s) 679
BsiHKAI GWGCWC 2 cut(s) 1298, 1492
BslFI GGGAC 4 cut(s) 431, 504, 773, 1181
BslI CCNNNNNNNGG 9 cut(s) 198, 350, 463, 622, 635, 678, 1046, 1667, 1679
BsmAI GTCTC 1 cut(s) 1748
BsmBI CGTCTC 1 cut(s) 1748
BsmFI GGGAC 4 cut(s) 431, 504, 773, 1181
BsmI GAATGC 1 cut(s) 601
BsnI GGCC 4 cut(s) 305, 512, 940, 1057
Bsp1286I GDGCHC 4 cut(s) 668, 1298, 1492, 1513
Bsp1720I GCTNAGC 1 cut(s) 700
BspANI GGCC 4 cut(s) 305, 512, 940, 1057
BspCNI CTCAG 4 cut(s) 713, 718, 919, 1876
BspFNI CGCG 2 cut(s) 14, 406
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 7 cut(s) 399, 627, 665, 827, 1276, 1397, 1632
BspMI ACCTGC 1 cut(s) 986
BspPI GGATC 8 cut(s) 981, 1181, 1215, 1460, 1625, 1638, 1766, 1811
BspT107I GGYRCC 3 cut(s) 397, 825, 1395
BspTI CTTAAG 2 cut(s) 779, 1103
BsrDI GCAATG 2 cut(s) 478, 1391
BsrFI RCCGGY 4 cut(s) 394, 400, 678, 695
BssAI RCCGGY 4 cut(s) 394, 400, 678, 695
BssECI CCNNGG 4 cut(s) 498, 789, 1441, 1514
BssNI GRCGYC 1 cut(s) 398
BssT1I CCWWGG 4 cut(s) 498, 789, 1441, 1514
Bst2UI CCWGG 4 cut(s) 199, 942, 1393, 1674
Bst4CI ACNGT 2 cut(s) 822, 1864
Bst6I CTCTTC 3 cut(s) 435, 940, 1681
BstACI GRCGYC 1 cut(s) 398
BstAFI CTTAAG 2 cut(s) 779, 1103
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstBAI YACGTR 1 cut(s) 1508
BstC8I GCNNGC 2 cut(s) 396, 402
BstDEI CTNAG 5 cut(s) 700, 705, 906, 1475, 1884
BstF5I GGATG 7 cut(s) 13, 96, 871, 892, 1049, 1123, 1767
BstFNI CGCG 2 cut(s) 14, 406
BstH2I RGCGCY 1 cut(s) 401
BstHHI GCGC 3 cut(s) 400, 406, 879
BstMAI GTCTC 1 cut(s) 1748
BstMCI CGRYCG 1 cut(s) 679
BstMWI GCNNNNNNNGC 4 cut(s) 11, 625, 1149, 1805
BstNI CCWGG 4 cut(s) 199, 942, 1393, 1674
BstNSI RCATGY 1 cut(s) 766
BstPAI GACNNNNGTC 1 cut(s) 1173
BstSCI CCNGG 6 cut(s) 197, 350, 940, 1039, 1391, 1672
BstSLI GKGCMC 1 cut(s) 1513
BstUI CGCG 2 cut(s) 14, 406
BstV1I GCAGC 3 cut(s) 304, 631, 1820
BstX2I RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
BstYI RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
BsuRI GGCC 4 cut(s) 305, 512, 940, 1057
BtgZI GCGATG 1 cut(s) 336
BtrI CACGTC 1 cut(s) 1758
BtsCI GGATG 7 cut(s) 13, 96, 871, 892, 1049, 1123, 1767
BtsI GCAGTG 2 cut(s) 872, 1381
BtsIMutI CAGTG 4 cut(s) 528, 827, 872, 1381
BveI ACCTGC 1 cut(s) 986
Cac8I GCNNGC 2 cut(s) 396, 402
CaiI CAGNNNCTG 1 cut(s) 1883
CciI TCATGA 1 cut(s) 976
CfoI GCGC 3 cut(s) 400, 406, 879
Cfr10I RCCGGY 4 cut(s) 394, 400, 678, 695
Cfr13I GGNCC 6 cut(s) 275, 335, 389, 408, 511, 1670
CpoI CGGWCCG 2 cut(s) 275, 335
CseI GACGC 2 cut(s) 20, 269
Csp6I GTAC 7 cut(s) 216, 454, 577, 966, 1457, 1723, 1825
CspAI ACCGGT 1 cut(s) 678
CspI CGGWCCG 2 cut(s) 275, 335
CviAII CATG 5 cut(s) 763, 977, 1454, 1568, 1663
CviQI GTAC 7 cut(s) 216, 454, 577, 966, 1457, 1723, 1825
DdeI CTNAG 5 cut(s) 700, 705, 906, 1475, 1884
DinI GGCGCC 1 cut(s) 399
DrdI GACNNNNNNGTC 1 cut(s) 282
DseDI GACNNNNNNGTC 1 cut(s) 282
Eam1104I CTCTTC 3 cut(s) 435, 940, 1681
EarI CTCTTC 3 cut(s) 435, 940, 1681
EciI GGCGGA 4 cut(s) 20, 32, 151, 1461
Ecl136II GAGCTC 1 cut(s) 1490
Eco130I CCWWGG 4 cut(s) 498, 789, 1441, 1514
Eco147I AGGCCT 1 cut(s) 940
Eco24I GRGCYC 2 cut(s) 668, 1492
Eco32I GATATC 1 cut(s) 1362
Eco47I GGWCC 5 cut(s) 275, 335, 389, 408, 1670
Eco53kI GAGCTC 1 cut(s) 1490
Eco57I CTGAAG 3 cut(s) 506, 654, 1811
Eco72I CACGTG 1 cut(s) 1508
EcoICRI GAGCTC 1 cut(s) 1490
EcoRII CCWGG 4 cut(s) 197, 940, 1391, 1672
EcoRV GATATC 1 cut(s) 1362
EcoT14I CCWWGG 4 cut(s) 498, 789, 1441, 1514
EcoT38I GRGCYC 2 cut(s) 668, 1492
EgeI GGCGCC 1 cut(s) 399
EheI GGCGCC 1 cut(s) 399
ErhI CCWWGG 4 cut(s) 498, 789, 1441, 1514
Esp3I CGTCTC 1 cut(s) 1748
FaeI CATG 5 cut(s) 766, 980, 1457, 1571, 1666
FaqI GGGAC 4 cut(s) 431, 504, 773, 1181
FatI CATG 5 cut(s) 762, 976, 1453, 1567, 1662
FbaI TGATCA 2 cut(s) 523, 1746
Fnu4HI GCNGC 6 cut(s) 15, 293, 341, 344, 620, 1809
FokI GGATG 7 cut(s) 20, 83, 878, 899, 1056, 1130, 1774
FriOI GRGCYC 2 cut(s) 668, 1492
Fsp4HI GCNGC 6 cut(s) 15, 293, 341, 344, 620, 1809
FspBI CTAG 8 cut(s) 36, 249, 537, 740, 831, 936, 1113, 1515
FspI TGCGCA 1 cut(s) 878
GlaI GCGC 3 cut(s) 399, 405, 878
GluI GCNGC 6 cut(s) 15, 293, 341, 344, 620, 1809
GsaI CCCAGC 1 cut(s) 1855
GsuI CTGGAG 4 cut(s) 644, 682, 1323, 1818
HaeII RGCGCY 1 cut(s) 401
HaeIII GGCC 4 cut(s) 305, 512, 940, 1057
HgaI GACGC 2 cut(s) 20, 269
HhaI GCGC 3 cut(s) 400, 406, 879
Hin1I GRCGYC 1 cut(s) 398
Hin1II CATG 5 cut(s) 766, 980, 1457, 1571, 1666
Hin6I GCGC 3 cut(s) 398, 404, 877
HinP1I GCGC 3 cut(s) 398, 404, 877
HindIII AAGCTT 1 cut(s) 1708
HinfI GANTC 6 cut(s) 254, 428, 460, 1125, 1408, 1880
HphI GGTGA 4 cut(s) 389, 478, 685, 949
Hpy166II GTNNAC 4 cut(s) 287, 818, 1310, 1604
Hpy8I GTNNAC 4 cut(s) 287, 818, 1310, 1604
Hpy99I CGWCG 7 cut(s) 32, 117, 314, 317, 320, 371, 374
HpyAV CCTTC 8 cut(s) 137, 183, 481, 629, 974, 1153, 1621, 1667
HpyCH4III ACNGT 2 cut(s) 822, 1864
HpyCH4IV ACGT 6 cut(s) 1068, 1174, 1236, 1507, 1606, 1757
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 625, 1149, 1805
HpyF3I CTNAG 5 cut(s) 700, 705, 906, 1475, 1884
HpySE526I ACGT 6 cut(s) 1068, 1174, 1236, 1507, 1606, 1757
Hsp92I GRCGYC 1 cut(s) 398
Hsp92II CATG 5 cut(s) 766, 980, 1457, 1571, 1666
HspAI GCGC 3 cut(s) 398, 404, 877
KasI GGCGCC 1 cut(s) 397
KroI GCCGGC 2 cut(s) 394, 400
KroNI GCCGGC 2 cut(s) 396, 402
Ksp22I TGATCA 2 cut(s) 523, 1746
LmnI GCTCC 5 cut(s) 32, 625, 663, 1487, 1837
Lsp1109I GCAGC 3 cut(s) 304, 631, 1820
LweI GCATC 2 cut(s) 313, 424
MaeI CTAG 8 cut(s) 36, 249, 537, 740, 831, 936, 1113, 1515
MaeII ACGT 6 cut(s) 1068, 1174, 1236, 1507, 1606, 1757
MaeIII GTNAC 6 cut(s) 116, 691, 725, 870, 955, 1237
MboII GAAGA 4 cut(s) 452, 957, 1698, 1781
MfeI CAATTG 1 cut(s) 1281
MflI RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
MhlI GDGCHC 4 cut(s) 668, 1298, 1492, 1513
MluCI AATT 5 cut(s) 44, 205, 298, 990, 1281
Mly113I GGCGCC 1 cut(s) 398
MlyI GAGTC 1 cut(s) 1874
MmeI TCCRAC 2 cut(s) 333, 1493
MreI CGCCGGCG 2 cut(s) 394, 400
MroNI GCCGGC 2 cut(s) 394, 400
MseI TTAA 4 cut(s) 780, 1035, 1104, 1638
MslI CAYNNNNRTG 2 cut(s) 500, 1086
MspA1I CMGCKG 1 cut(s) 622
MspCI CTTAAG 2 cut(s) 779, 1103
MspR9I CCNGG 6 cut(s) 199, 352, 942, 1041, 1393, 1674
MunI CAATTG 1 cut(s) 1281
Mva1269I GAATGC 1 cut(s) 601
MvaI CCWGG 4 cut(s) 199, 942, 1393, 1674
MvnI CGCG 2 cut(s) 14, 406
MwoI GCNNNNNNNGC 4 cut(s) 11, 625, 1149, 1805
NaeI GCCGGC 2 cut(s) 396, 402
NarI GGCGCC 1 cut(s) 398
NciI CCSGG 2 cut(s) 352, 1041
NgoMIV GCCGGC 2 cut(s) 394, 400
NlaIII CATG 5 cut(s) 766, 980, 1457, 1571, 1666
NlaIV GGNNCC 7 cut(s) 399, 627, 665, 827, 1276, 1397, 1632
NmeAIII GCCGAG 1 cut(s) 385
NmuCI GTSAC 5 cut(s) 691, 725, 870, 955, 1237
NsbI TGCGCA 1 cut(s) 878
NspI RCATGY 1 cut(s) 766
OliI CACNNNNGTG 1 cut(s) 500
PagI TCATGA 1 cut(s) 976
PaqCI CACCTGC 1 cut(s) 986
PceI AGGCCT 1 cut(s) 940
PciI ACATGT 1 cut(s) 762
PcsI WCGNNNNNNNCGW 1 cut(s) 318
PctI GAATGC 1 cut(s) 601
PdiI GCCGGC 2 cut(s) 396, 402
PfeI GAWTC 5 cut(s) 254, 428, 460, 1125, 1408
PflMI CCANNNNNTGG 2 cut(s) 198, 1679
PfoI TCCNGGA 1 cut(s) 350
PinAI ACCGGT 1 cut(s) 678
PkrI GCNGC 6 cut(s) 16, 294, 342, 345, 621, 1810
PleI GAGTC 1 cut(s) 1874
PluTI GGCGCC 1 cut(s) 401
PmaCI CACGTG 1 cut(s) 1508
PmlI CACGTG 1 cut(s) 1508
PpsI GAGTC 1 cut(s) 1874
Ppu21I YACGTR 1 cut(s) 1508
PscI ACATGT 1 cut(s) 762
PshAI GACNNNNGTC 1 cut(s) 1173
Psp124BI GAGCTC 1 cut(s) 1492
Psp6I CCWGG 4 cut(s) 197, 940, 1391, 1672
PspCI CACGTG 1 cut(s) 1508
PspFI CCCAGC 1 cut(s) 1851
PspGI CCWGG 4 cut(s) 197, 940, 1391, 1672
PspN4I GGNNCC 7 cut(s) 399, 627, 665, 827, 1276, 1397, 1632
PspPI GGNCC 6 cut(s) 275, 335, 389, 408, 511, 1670
PstNI CAGNNNCTG 1 cut(s) 1883
PsuI RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
PvuII CAGCTG 1 cut(s) 622
RsaI GTAC 7 cut(s) 217, 455, 578, 967, 1458, 1724, 1826
RsaNI GTAC 7 cut(s) 216, 454, 577, 966, 1457, 1723, 1825
RseI CAYNNNNRTG 2 cut(s) 500, 1086
Rsr2I CGGWCCG 2 cut(s) 275, 335
RsrII CGGWCCG 2 cut(s) 275, 335
SacI GAGCTC 1 cut(s) 1492
SaqAI TTAA 4 cut(s) 780, 1035, 1104, 1638
SatI GCNGC 6 cut(s) 15, 293, 341, 344, 620, 1809
Sau96I GGNCC 6 cut(s) 275, 335, 389, 408, 511, 1670
SchI GAGTC 1 cut(s) 1874
ScrFI CCNGG 6 cut(s) 199, 352, 942, 1041, 1393, 1674
SduI GDGCHC 4 cut(s) 668, 1298, 1492, 1513
SfaNI GCATC 2 cut(s) 313, 424
SfoI GGCGCC 1 cut(s) 399
SgrAI CRCCGGYG 2 cut(s) 394, 400
SinI GGWCC 5 cut(s) 275, 335, 389, 408, 1670
SmiMI CAYNNNNRTG 2 cut(s) 500, 1086
SmlI CTYRAG 4 cut(s) 779, 1103, 1135, 1193
SmoI CTYRAG 4 cut(s) 779, 1103, 1135, 1193
Sse9I AATT 5 cut(s) 44, 205, 298, 990, 1281
SseBI AGGCCT 1 cut(s) 940
SspDI GGCGCC 1 cut(s) 397
SspMI CTAG 8 cut(s) 36, 249, 537, 740, 831, 936, 1113, 1515
SstI GAGCTC 1 cut(s) 1492
StuI AGGCCT 1 cut(s) 940
StyD4I CCNGG 6 cut(s) 197, 350, 940, 1039, 1391, 1672
StyI CCWWGG 4 cut(s) 498, 789, 1441, 1514
TaaI ACNGT 2 cut(s) 822, 1864
TaiI ACGT 6 cut(s) 1071, 1177, 1239, 1510, 1609, 1760
TaqI TCGA 2 cut(s) 90, 1327
TasI AATT 5 cut(s) 44, 205, 298, 990, 1281
TatI WGTACW 3 cut(s) 965, 1456, 1824
TauI GCSGC 3 cut(s) 17, 343, 346
TfiI GAWTC 5 cut(s) 254, 428, 460, 1125, 1408
Tru1I TTAA 4 cut(s) 780, 1035, 1104, 1638
Tru9I TTAA 4 cut(s) 780, 1035, 1104, 1638
TscAI CASTG 4 cut(s) 535, 827, 879, 1381
TseFI GTSAC 5 cut(s) 691, 725, 870, 955, 1237
TseI GCWGC 3 cut(s) 292, 619, 1808
Tsp45I GTSAC 5 cut(s) 691, 725, 870, 955, 1237
TspDTI ATGAA 4 cut(s) 608, 993, 1196, 1745
TspGWI ACGGA 3 cut(s) 45, 203, 744
TspRI CASTG 4 cut(s) 535, 827, 879, 1381
Van91I CCANNNNNTGG 2 cut(s) 198, 1679
Vha464I CTTAAG 2 cut(s) 779, 1103
VpaK11BI GGWCC 5 cut(s) 275, 335, 389, 408, 1670
XapI RAATTY 1 cut(s) 44
XbaI TCTAGA 1 cut(s) 536
XceI RCATGY 1 cut(s) 766
XmaJI CCTAGG 1 cut(s) 1514
XspI CTAG 8 cut(s) 36, 249, 537, 740, 831, 936, 1113, 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.