MD08G1057600.v1.1

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0005705
Physical Location & Seq
Reverse (-)
4626610 .. 4633862
7253 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1057600.v1.1.491

Sequence Viewer

Length: 2754 bp
ATGGCGTCGGCAGAGAAAGAGCTCGAGGCACAGCTTACGGAAGCTGGGAATCAGCTCTTGGAACCTCCGTCTTCCGTCGACGACCTCCTTGATGTTCTTGACAGAGTTGAGAATTGTCTGTCGAAGGTAGAACAGTCACCTACAAAGTCAATGCAAACTGCGCTTTCTCCATCACAGAATGCATTGGTTGCTGAGGAACTTTTCAGGCATCCAAATCCCGATGTCAAAGTTGGTGTTGCAGCTTGCATCAGTGAGATAACAAGAATAACTGCACCTGATGCACCTTATGATGATGAGCAAATGAAGGAAGTCTTTCATCTTATTGTATCTTCCTTTGAAAATCTACATGACAAGTCTAGCCGATCATACGCAAAGAGGGCTTCGATTCTTGAAACTGTTGCGAAGGTCAGATCGTGTGTGGTGATGTTGGATCTTGAATGTGATGCATTGATCGTTGAAATGTTCCAGCATTTCCTTAAGGCAATAAGGGATTATCACCCAGAGAATGTTTTCTCATCCATGGAGACTATTATGACTCTTGTTTTAGAAGAAAGTGAAGAAGTTTCTGCTGAGCTACTATCTCCCTTATTAGCTAGTGTGAAAAACGACAATGAGGATATTCTACCAATTGGACGAAAGTTGGGGGAGAGAGTACTTGAAAGCTGTGCCACTAAACTTAAGGATGACCTGGTAAAAGAAGTAAAAAGCTTGGGCATTGTTTTTGATGATTATAGTAAAGTTGTAGCCTCGATCTGCCAAGAGGCAAGTGATGATGCTGAGCAGAATGAAGGCCGTGATGCTGATGGAAATGTGGCTGCCGAGGAGAAATCAGCAATTAGGGAATCTTCCGATGAGGCAGCCCAGGTAGATAAAGAAAAGGCAGAAGCGCCAGTTTCTCCTGAACGAATTGATCCAGCTGTTGACAGATCTTCAAAGTTAGTTGTGAACAATGGTAATGCAGAGACTGGCGAAGATGATTCTGTAGCTGAGTCGAATGCCTTGAAGAAGGAAGAGGAGGGCGACAATACCGAGGATCAGAAAGATCCAAACGCATCAAGCAATGGTGAACCTGATAGTTTGGAGACTGAGAAAGCTGCTGATGCAGAACAAATTCCAGAAAAAGCTACCAAAGAAGGAGCAGGGAATTCTGATTTGTCAACAAAATCAACACAACCTTCAGAAAATTGTCAAGCTGATAATGAGGAGGATACTGAGACACAGCCAGAACATAAGAGTAAAACAGAAGATGTTCCCAGCTCACCTCATGAGGATCCTTCTGTGGAGGCAGCTGTGCAATCGGAGAATGAGAAAGTATCTGATGTTAACCTCTCTTCAAAGCTATTGGAAAAGGAACCTGCTGGTGTTGCTTCTCCATCCCCAAGTGAGAGCCTTCCTGATGTAAGTCGCTCCAAAAAGGCTGGAAGGAATAAGAAGAAAGATAGTTCTAATAAGGGGGCTGCACAATTTGCAGATGATGAACACCAAAAGGTTACTGATGGAACCAGTGATTCAGAATTAAAAACAAGTAGACGCTCTGGGAAAAAGGCGTCTGCTGGGGTTTCTAATGAGAATAAAAGTCCAACTGTGATGGAGACATCTAGAAAGGAAAGTGCCACCACAAGCGATTCAGAGGCAAAACAGAAGTCAGCTAAGAAGGTAGATGGGAGCACTAAAACTAGGGATGGGTCTCCTATAAAGCAAGCAGTAGATAAGAGAAAGCGGGGTCGTGGAAAAGTTACCCCGGCAAAGGCTGCAACAAAATCTTCAGCTAAGGATGATGACAAAGAGATGTTGTCAACACCAAAGTCAGCCCCAAAATTAACTAAGGATGAATCTCCCCTGGAGGAGACCCCTAAGACCAATTCAAAGAGGAAGCGTGCTTCAGGAAAAGAGAAGGAATCTGGTGACAAAGATCATGGTGAGGAGATGGTTGGATCAAAGATTAAAGTTTGGTGGCCAAAAGATCGTACGTTTTATGAAGGTGTTGTCACATACTTTGATTCTGCTAAAAAGAAGCATAAGGTATCATATACTGATGGTGATGTTGAAACACTAAATCTTAAAAAAGAGAGGTGGGAGTTTGTAGCAGATGACCCTGACTCGGATGAGGAGCAAGGTACTGATCAATTGAGTCATGATGCTTCTTCTGACGTGCCTTTGAAGAAGAAGGTGAAAAAAACTCCTGATGACTCAACTAAGAAGGAAAAGATGGACACTTCGCCCAAATTTTTGGATCGCAAATCGAAAGAAAGCAGTAAAGCTGATAGCAAATCCAAAGGTGGTTCTGGAAAATCAGATGATGAACGTATTGGAAAATTAAAGGATCACACTCCAAAAAGTAGTGGTAAATCGGTTGATGTTGCTCAGAAGACATCCAGTAAATCGAAGAACAATGATACCCAGACGCCTAAAAGCACCAAATCCAAGGAAGATGACAGCACCGCACAAAAAGCTTCCACCAAGTCCAAGCAAGACACACAGAAGGCTGGGAAGTCAAATCAGAGCACATTAAAGACTGCCTCCGTTTCCAAAGGTAAATCGTCTGCTAGCAGCGGGAAAGCAAACGCCAACGGTACAGGCAAGGCAAAAGCAGCTTCAAAACCGACTAAAGAAGATGAGGATATGAAGGAAGCCTCAAGTGATTCTGAGAAAGCGCCAGAAAGCACACCAAAGGGGAAGTCCCCAACTTTAGCCAAGGTACTTGCAAGCGAGACCAAGTCTGGTAAGAAGCGGCGAAGAGGAAGCAAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

918

Amino Acids

99.22

Weight (kDa)

5.41

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 228 1.1e-52 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1363
AccI GTMKAC 2 cut(s) 78, 1528
AciI CCGC 4 cut(s) 1720, 2442, 2553, 2731
AclWI GGATC 9 cut(s) 438, 905, 1037, 1041, 1265, 1278, 1942, 2241, 2331
AcoI YGGCCR 1 cut(s) 1955
AcsI RAATTY 3 cut(s) 1110, 1144, 2225
AcuI CTGAAG 3 cut(s) 1161, 1749, 1866
AcyI GRCGYC 3 cut(s) 5, 1547, 2405
AfaI GTAC 5 cut(s) 654, 1969, 2119, 2575, 2700
AfiI CCNNNNNNNGG 2 cut(s) 1747, 2101
AflII CTTAAG 2 cut(s) 476, 677
AjiI CACGTC 1 cut(s) 2152
AjnI CCWGG 3 cut(s) 687, 861, 1839
AjuI GAANNNNNNNTTGG 2 cut(s) 41, 73
Alw21I GWGCWC 3 cut(s) 24, 1670, 2507
Alw26I GTCTC 8 cut(s) 518, 956, 1076, 1208, 1586, 1692, 1841, 2705
AlwI GGATC 9 cut(s) 438, 905, 1037, 1041, 1265, 1278, 1942, 2241, 2331
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 1 cut(s) 23
AoxI GGCC 2 cut(s) 790, 1955
ApeKI GCWGC 9 cut(s) 239, 815, 857, 1094, 1286, 1457, 1751, 2550, 2591
ApoI RAATTY 3 cut(s) 1110, 1144, 2225
ArsI GACNNNNNNTTYG 4 cut(s) 1628, 1660, 2663, 2695
Asp700I GAANNNNTTC 4 cut(s) 312, 509, 1110, 1248
AspLEI GCGC 3 cut(s) 163, 889, 2656
AsuC2I CCSGG 1 cut(s) 1742
AsuHPI GGTGA 9 cut(s) 129, 433, 488, 1076, 1251, 1916, 1931, 2051, 2182
AsuNHI GCTAGC 1 cut(s) 2546
AvaI CYCGRG 1 cut(s) 23
BalI TGGCCA 1 cut(s) 1957
BamHI GGATCC 1 cut(s) 1270
BanII GRGCYC 1 cut(s) 24
BbsI GAAGAC 2 cut(s) 63, 2375
Bbv12I GWGCWC 3 cut(s) 24, 1670, 2507
BbvCI CCTCAGC 1 cut(s) 192
BbvI GCAGC 9 cut(s) 251, 802, 869, 1081, 1298, 1444, 1738, 2562, 2603
BceAI ACGGC 1 cut(s) 777
BciT130I CCWGG 3 cut(s) 689, 863, 1841
BciVI GTATCC 1 cut(s) 1201
BclI TGATCA 1 cut(s) 2122
BcnI CCSGG 1 cut(s) 1742
BcoDI GTCTC 8 cut(s) 518, 956, 1076, 1208, 1586, 1692, 1841, 2705
BfaI CTAG 5 cut(s) 357, 594, 1599, 1677, 2547
BfmI CTRYAG 1 cut(s) 981
BfoI RGCGCY 2 cut(s) 890, 2657
BfrI CTTAAG 2 cut(s) 476, 677
BfuAI ACCTGC 1 cut(s) 1363
BfuI GTATCC 1 cut(s) 1201
BglII AGATCT 1 cut(s) 926
BlpI GCTNAGC 2 cut(s) 570, 777
BmcAI AGTACT 1 cut(s) 654
Bme1390I CCNGG 4 cut(s) 689, 863, 1742, 1841
BmeT110I CYCGRG 1 cut(s) 23
BmgBI CACGTC 1 cut(s) 2152
BmiI GGNNCC 4 cut(s) 63, 1272, 1353, 1501
BmrFI CCNGG 4 cut(s) 689, 863, 1742, 1841
BmsI GCATC 9 cut(s) 217, 255, 268, 433, 763, 787, 1061, 1090, 2128
BmtI GCTAGC 1 cut(s) 2550
BpiI GAAGAC 2 cut(s) 63, 2375
BpmI CTGGAG 1 cut(s) 1862
Bpu10I CCTNAGC 2 cut(s) 192, 1770
Bpu1102I GCTNAGC 2 cut(s) 570, 777
BpuEI CTTGAG 1 cut(s) 2620
BpuMI CCSGG 1 cut(s) 1742
BsaHI GRCGYC 3 cut(s) 5, 1547, 2405
BsaI GGTCTC 3 cut(s) 1692, 1841, 2705
BsaJI CCNNGG 8 cut(s) 519, 819, 861, 1029, 1740, 1839, 2424, 2694
Bsc4I CCNNNNNNNGG 2 cut(s) 1747, 2101
Bse1I ACTGG 4 cut(s) 890, 970, 1503, 2376
Bse3DI GCAATG 1 cut(s) 1066
BseBI CCWGG 3 cut(s) 689, 863, 1841
BseDI CCNNGG 8 cut(s) 519, 819, 861, 1029, 1740, 1839, 2424, 2694
BseGI GGATG 9 cut(s) 208, 515, 688, 1373, 1687, 1780, 1834, 2110, 2372
BseLI CCNNNNNNNGG 2 cut(s) 1747, 2101
BseMI GCAATG 1 cut(s) 1066
BseMII CTCAG 8 cut(s) 183, 561, 768, 978, 1077, 1203, 2378, 2637
BseNI ACTGG 4 cut(s) 890, 970, 1503, 2376
BseRI GAGGAG 6 cut(s) 836, 1028, 1217, 1859, 1937, 2123
BseXI GCAGC 9 cut(s) 251, 802, 869, 1081, 1298, 1444, 1738, 2562, 2603
BseYI CCCAGC 4 cut(s) 44, 1253, 1553, 2486
BsgI GTGCAG 2 cut(s) 255, 1443
BshFI GGCC 2 cut(s) 792, 1957
BsiHKAI GWGCWC 3 cut(s) 24, 1670, 2507
BsiHKCI CYCGRG 1 cut(s) 23
BsiSI CCGG 1 cut(s) 1742
BsiWI CGTACG 1 cut(s) 1967
BslFI GGGAC 1 cut(s) 2665
BslI CCNNNNNNNGG 2 cut(s) 1747, 2101
BsmAI GTCTC 8 cut(s) 518, 956, 1076, 1208, 1586, 1692, 1841, 2705
BsmFI GGGAC 1 cut(s) 2665
BsmI GAATGC 2 cut(s) 184, 1000
BsnI GGCC 2 cut(s) 792, 1957
Bso31I GGTCTC 3 cut(s) 1692, 1841, 2705
BsoBI CYCGRG 1 cut(s) 23
Bsp1286I GDGCHC 3 cut(s) 24, 1670, 2507
Bsp1720I GCTNAGC 2 cut(s) 570, 777
Bsp19I CCATGG 1 cut(s) 519
BspACI CCGC 4 cut(s) 1720, 2442, 2553, 2731
BspANI GGCC 2 cut(s) 792, 1957
BspCNI CTCAG 8 cut(s) 184, 562, 769, 979, 1078, 1204, 2377, 2638
BspHI TCATGA 2 cut(s) 1264, 2134
BspLI GGNNCC 4 cut(s) 63, 1272, 1353, 1501
BspMI ACCTGC 1 cut(s) 1363
BspOI GCTAGC 1 cut(s) 2550
BspPI GGATC 9 cut(s) 438, 905, 1037, 1041, 1265, 1278, 1942, 2241, 2331
BspTI CTTAAG 2 cut(s) 476, 677
BspTNI GGTCTC 3 cut(s) 1692, 1841, 2705
BsrDI GCAATG 1 cut(s) 1066
BsrI ACTGG 4 cut(s) 890, 970, 1503, 2376
BssECI CCNNGG 8 cut(s) 519, 819, 861, 1029, 1740, 1839, 2424, 2694
BssNI GRCGYC 3 cut(s) 5, 1547, 2405
BssT1I CCWWGG 3 cut(s) 519, 2424, 2694
Bst2UI CCWGG 3 cut(s) 689, 863, 1841
Bst4CI ACNGT 4 cut(s) 135, 397, 1585, 2573
Bst6I CTCTTC 3 cut(s) 1005, 1336, 2731
BstACI GRCGYC 3 cut(s) 5, 1547, 2405
BstAFI CTTAAG 2 cut(s) 476, 677
BstAPI GCANNNNNTGC 4 cut(s) 188, 278, 1466, 1751
BstC8I GCNNGC 5 cut(s) 244, 1701, 1878, 2548, 2707
BstDSI CCRYGG 1 cut(s) 519
BstF5I GGATG 9 cut(s) 208, 515, 688, 1373, 1687, 1780, 1834, 2110, 2372
BstH2I RGCGCY 2 cut(s) 890, 2657
BstHHI GCGC 3 cut(s) 163, 889, 2656
BstMAI GTCTC 8 cut(s) 518, 956, 1076, 1208, 1586, 1692, 1841, 2705
BstNI CCWGG 3 cut(s) 689, 863, 1841
BstSCI CCNGG 4 cut(s) 687, 861, 1740, 1839
BstSFI CTRYAG 1 cut(s) 981
BstV1I GCAGC 9 cut(s) 251, 802, 869, 1081, 1298, 1444, 1738, 2562, 2603
BstV2I GAAGAC 2 cut(s) 63, 2375
BstX2I RGATCY 4 cut(s) 430, 926, 1042, 1270
BstXI CCANNNNNNTGG 1 cut(s) 2230
BstYI RGATCY 4 cut(s) 430, 926, 1042, 1270
BsuI GTATCC 1 cut(s) 1201
BsuRI GGCC 2 cut(s) 792, 1957
BtgI CCRYGG 1 cut(s) 519
BtrI CACGTC 1 cut(s) 2152
BtsCI GGATG 9 cut(s) 208, 515, 688, 1373, 1687, 1780, 1834, 2110, 2372
BtsIMutI CAGTG 2 cut(s) 256, 1510
BveI ACCTGC 1 cut(s) 1363
Cac8I GCNNGC 5 cut(s) 244, 1701, 1878, 2548, 2707
CaiI CAGNNNCTG 1 cut(s) 965
CciI TCATGA 2 cut(s) 1264, 2134
CfoI GCGC 3 cut(s) 163, 889, 2656
CseI GACGC 3 cut(s) 1536, 1539, 2413
CsiI ACCWGGT 1 cut(s) 687
Csp6I GTAC 5 cut(s) 653, 1968, 2118, 2574, 2699
CviAII CATG 5 cut(s) 347, 520, 1265, 1916, 2135
CviQI GTAC 5 cut(s) 653, 1968, 2118, 2574, 2699
EaeI YGGCCR 1 cut(s) 1955
Eam1104I CTCTTC 3 cut(s) 1005, 1336, 2731
EarI CTCTTC 3 cut(s) 1005, 1336, 2731
Ecl136II GAGCTC 1 cut(s) 22
Eco130I CCWWGG 3 cut(s) 519, 2424, 2694
Eco24I GRGCYC 1 cut(s) 24
Eco31I GGTCTC 3 cut(s) 1692, 1841, 2705
Eco53kI GAGCTC 1 cut(s) 22
Eco57I CTGAAG 3 cut(s) 1161, 1749, 1866
Eco88I CYCGRG 1 cut(s) 23
EcoICRI GAGCTC 1 cut(s) 22
EcoRI GAATTC 1 cut(s) 1144
EcoRII CCWGG 3 cut(s) 687, 861, 1839
EcoT14I CCWWGG 3 cut(s) 519, 2424, 2694
EcoT22I ATGCAT 2 cut(s) 184, 448
EcoT38I GRGCYC 1 cut(s) 24
ErhI CCWWGG 3 cut(s) 519, 2424, 2694
FaeI CATG 5 cut(s) 350, 523, 1268, 1919, 2138
FalI AAGNNNNNCTT 2 cut(s) 296, 328
FaqI GGGAC 1 cut(s) 2665
FatI CATG 5 cut(s) 346, 519, 1264, 1915, 2134
FauI CCCGC 2 cut(s) 1713, 2546
FbaI TGATCA 1 cut(s) 2122
FblI GTMKAC 2 cut(s) 78, 1528
FokI GGATG 9 cut(s) 195, 502, 695, 1360, 1694, 1787, 1841, 2117, 2359
FriOI GRGCYC 1 cut(s) 24
FspBI CTAG 5 cut(s) 357, 594, 1599, 1677, 2547
GlaI GCGC 3 cut(s) 162, 888, 2655
GsaI CCCAGC 4 cut(s) 48, 1257, 1557, 2490
GsuI CTGGAG 1 cut(s) 1862
HaeII RGCGCY 2 cut(s) 890, 2657
HaeIII GGCC 2 cut(s) 792, 1957
HapII CCGG 1 cut(s) 1742
HgaI GACGC 3 cut(s) 1536, 1539, 2413
HhaI GCGC 3 cut(s) 163, 889, 2656
Hin1I GRCGYC 3 cut(s) 5, 1547, 2405
Hin1II CATG 5 cut(s) 350, 523, 1268, 1919, 2138
Hin6I GCGC 3 cut(s) 161, 887, 2654
HinP1I GCGC 3 cut(s) 161, 887, 2654
HincII GTYRAC 5 cut(s) 79, 922, 1158, 1324, 1797
HindII GTYRAC 5 cut(s) 79, 922, 1158, 1324, 1797
HindIII AAGCTT 2 cut(s) 706, 2451
HpaI GTTAAC 1 cut(s) 1324
HpaII CCGG 1 cut(s) 1742
HphI GGTGA 9 cut(s) 129, 433, 488, 1076, 1251, 1916, 1931, 2051, 2182
Hpy166II GTNNAC 8 cut(s) 79, 922, 946, 1067, 1158, 1324, 1529, 1797
Hpy8I GTNNAC 8 cut(s) 79, 922, 946, 1067, 1158, 1324, 1529, 1797
Hpy99I CGWCG 3 cut(s) 10, 80, 83
HpyCH4III ACNGT 4 cut(s) 135, 397, 1585, 2573
HpyCH4IV ACGT 3 cut(s) 1970, 2151, 2305
HpySE526I ACGT 3 cut(s) 1970, 2151, 2305
Hsp92I GRCGYC 3 cut(s) 5, 1547, 2405
Hsp92II CATG 5 cut(s) 350, 523, 1268, 1919, 2138
HspAI GCGC 3 cut(s) 161, 887, 2654
Ksp22I TGATCA 1 cut(s) 2122
KspAI GTTAAC 1 cut(s) 1324
LmnI GCTCC 4 cut(s) 1136, 1412, 1665, 2110
Lsp1109I GCAGC 9 cut(s) 251, 802, 869, 1081, 1298, 1444, 1738, 2562, 2603
LweI GCATC 9 cut(s) 217, 255, 268, 433, 763, 787, 1061, 1090, 2128
MabI ACCWGGT 1 cut(s) 687
MaeI CTAG 5 cut(s) 357, 594, 1599, 1677, 2547
MaeII ACGT 3 cut(s) 1970, 2151, 2305
MaeIII GTNAC 5 cut(s) 135, 1489, 1735, 1904, 1987
MfeI CAATTG 2 cut(s) 627, 2126
MflI RGATCY 4 cut(s) 430, 926, 1042, 1270
MhlI GDGCHC 3 cut(s) 24, 1670, 2507
MlsI TGGCCA 1 cut(s) 1957
MluNI TGGCCA 1 cut(s) 1957
MlyI GAGTC 5 cut(s) 529, 998, 2093, 2140, 2183
MmeI TCCRAC 3 cut(s) 408, 1604, 1912
Mox20I TGGCCA 1 cut(s) 1957
Mph1103I ATGCAT 2 cut(s) 184, 448
MroXI GAANNNNTTC 4 cut(s) 312, 509, 1110, 1248
MscI TGGCCA 1 cut(s) 1957
Msp20I TGGCCA 1 cut(s) 1957
MspA1I CMGCKG 3 cut(s) 917, 1289, 2553
MspCI CTTAAG 2 cut(s) 476, 677
MspI CCGG 1 cut(s) 1742
MspR9I CCNGG 4 cut(s) 689, 863, 1742, 1841
MunI CAATTG 2 cut(s) 627, 2126
Mva1269I GAATGC 2 cut(s) 184, 1000
MvaI CCWGG 3 cut(s) 689, 863, 1841
NciI CCSGG 1 cut(s) 1742
NcoI CCATGG 1 cut(s) 519
NheI GCTAGC 1 cut(s) 2546
NlaIII CATG 5 cut(s) 350, 523, 1268, 1919, 2138
NlaIV GGNNCC 4 cut(s) 63, 1272, 1353, 1501
NmeAIII GCCGAG 1 cut(s) 844
NmuCI GTSAC 3 cut(s) 135, 1904, 1987
NsiI ATGCAT 2 cut(s) 184, 448
PaeR7I CTCGAG 1 cut(s) 23
PagI TCATGA 2 cut(s) 1264, 2134
PctI GAATGC 2 cut(s) 184, 1000
PdmI GAANNNNTTC 4 cut(s) 312, 509, 1110, 1248
Pfl23II CGTACG 1 cut(s) 1967
PflFI GACNNNGTC 1 cut(s) 2716
PleI GAGTC 5 cut(s) 529, 997, 2093, 2139, 2183
PpsI GAGTC 5 cut(s) 529, 997, 2093, 2139, 2183
Psp124BI GAGCTC 1 cut(s) 24
Psp6I CCWGG 3 cut(s) 687, 861, 1839
PspFI CCCAGC 4 cut(s) 44, 1253, 1553, 2486
PspGI CCWGG 3 cut(s) 687, 861, 1839
PspLI CGTACG 1 cut(s) 1967
PspN4I GGNNCC 4 cut(s) 63, 1272, 1353, 1501
PspXI VCTCGAGB 1 cut(s) 23
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 4 cut(s) 430, 926, 1042, 1270
PsyI GACNNNGTC 1 cut(s) 2716
PvuII CAGCTG 2 cut(s) 917, 1289
RsaI GTAC 5 cut(s) 654, 1969, 2119, 2575, 2700
RsaNI GTAC 5 cut(s) 653, 1968, 2118, 2574, 2699
SacI GAGCTC 1 cut(s) 24
SalI GTCGAC 1 cut(s) 77
ScaI AGTACT 1 cut(s) 654
SchI GAGTC 5 cut(s) 529, 998, 2093, 2140, 2183
ScrFI CCNGG 4 cut(s) 689, 863, 1742, 1841
SduI GDGCHC 3 cut(s) 24, 1670, 2507
SexAI ACCWGGT 1 cut(s) 687
SfaNI GCATC 9 cut(s) 217, 255, 268, 433, 763, 787, 1061, 1090, 2128
SfcI CTRYAG 1 cut(s) 981
Sfr274I CTCGAG 1 cut(s) 23
SgrDI CGTCGACG 1 cut(s) 77
SlaI CTCGAG 1 cut(s) 23
SmlI CTYRAG 4 cut(s) 23, 476, 677, 2635
SmoI CTYRAG 4 cut(s) 23, 476, 677, 2635
SsiI CCGC 4 cut(s) 1720, 2442, 2553, 2731
SspMI CTAG 5 cut(s) 357, 594, 1599, 1677, 2547
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 4 cut(s) 687, 861, 1740, 1839
StyI CCWWGG 3 cut(s) 519, 2424, 2694
TaaI ACNGT 4 cut(s) 135, 397, 1585, 2573
TaiI ACGT 3 cut(s) 1973, 2154, 2308
TaqI TCGA 8 cut(s) 24, 78, 122, 383, 749, 992, 2243, 2384
TatI WGTACW 1 cut(s) 652
TauI GCSGC 1 cut(s) 2734
TscAI CASTG 2 cut(s) 256, 1510
TseFI GTSAC 3 cut(s) 135, 1904, 1987
TseI GCWGC 9 cut(s) 239, 815, 857, 1094, 1286, 1457, 1751, 2550, 2591
Tsp45I GTSAC 3 cut(s) 135, 1904, 1987
TspDTI ATGAA 8 cut(s) 305, 317, 801, 1491, 1845, 1992, 2316, 2639
TspGWI ACGGA 4 cut(s) 53, 57, 64, 2512
TspRI CASTG 2 cut(s) 256, 1510
Tth111I GACNNNGTC 1 cut(s) 2716
Vha464I CTTAAG 2 cut(s) 476, 677
XapI RAATTY 3 cut(s) 1110, 1144, 2225
XbaI TCTAGA 1 cut(s) 1598
XhoI CTCGAG 1 cut(s) 23
XmiI GTMKAC 2 cut(s) 78, 1528
XmnI GAANNNNTTC 4 cut(s) 312, 509, 1110, 1248
XspI CTAG 5 cut(s) 357, 594, 1599, 1677, 2547
ZrmI AGTACT 1 cut(s) 654
Zsp2I ATGCAT 2 cut(s) 184, 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.