RLG00000011410

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005705
Physical Location & Seq
Forward (+)
9190983 .. 9197363
6381 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011410

Sequence Viewer

Length: 2871 bp
ATGGCATCGACCGACAATGAGCTCGAAGCACAGCTATTGGAAGCTGGGAATCAACTCCTGGAGCCGCCGTCCACCGTCGACGACCTCCTTCCTCTTCTCGACAGGGTCGAAAGTTGTCTATCAAAGGTAGAACAATCACCAAACAAGTCAATGCAAGCCGCACTTTCACCGTCACAGAAGGCGTTGGTTGCTGATCAACTTTTAAGGCATTCAGATCCTGATGTCAAAGTTTCAGTTGCGTCTTGCATCAGTGAGATAACAAGAATAACAGCACCTGATGCACCATATGATGATGACCAAATGAAGCTTATTGTATCATCATTTGAAAGTCTAGATGACAAGTCCAGTCGATCATACACAAAGAGGACATCCATTCTTGAAACTGTTGCAAAGGTCAGGTCCTGTGTTGTAATGTTGGATCTTGAATGCGATGCATTGATCGTTGAGATGTTCCAGCATTTTCTCAAGGCAATAAGGGATTATCACCCAGAGAATGTTTTCTCATCGATGGAGACAATTATGACCCTTGTTATAGAAGAAAGTGAAGACATATCTTTTGAACTTCTTTCTCCCTTATTAGCTAGTGTGAAAAATGATGATGAGGACATTTTACCAATTTCTCGGAAGTTGGGGGAAAGAGTAATCGAAAACTCTGCTATTAAACTTAAGCCCCACCTGGCACAGGAAGTAGAAACCCATGGCATTGCATTAGGTGATTACAGTAAAGTAGTAGCTTCGATATGCCAAGAGACAGCTGGTGACACTGAGCAGAATGAAGTGCATGATGACGAAGATGTGGAGGACAAGTCAACAATCCGGGAATCTTCGGAAGAGGCAGTCCTGGTAGATAAAGAAAATTCCACCGCAGCAGTTTCTTCTGAACAAGTTGATCCTGTTATTGATGGATCCTCAAAGGTAGTTATGAATAATGGTGGTGCAGCAACTGGGGAAGATGAATGTTCGGCTGATTTGAACTCTTTAAAGAAGCAGGAGCAGGGTGAAGATACCGAGGAAGTCAGAGGTCCAAATACATCAAGTGTTGCTGAACCTGATAGTTTGGAGACTGAGAAGGCTGTTGATGCAAAACAAATGCCAGAAGAAGTTAGCGGGGATAAAGATAAGGATTCTAATTTGTCAACAGCACAACGTGCAGACAGTCCTCAAGCTGATAATGAGGAAGAAACCGAGGCACTTCCGCCCCATAAAAGTGGCTCTGAAGATGCTCCCAGTTCTCCTCGTGAGGTTCCTGATGTGGAGGCAGCTGTGCCTTCAGAAAATGAGAAAGGGTCGGATATAAATCTCTCCACTGCATTGGAGAAGGAATCAACTGATGTTGCTCCCACATCCCCAAGTGGGAGCCTTCCTGATGAAAGTCGTCCCAAAAAGGCTGGACGACATAAGAAGAAAGATACTTCTAATAAAGAGGCTACACCTGTTACTGATGATGAATCCAAAAAGGCAACTGATGGAACAAGTGATTCAGAATTAAGATCAAGTAAGCACTCTGGGAAAAAGGTCTCTGCTGGGGGTTCTAATGAGAATAAAAGTCCCATTGTGGCGGATGCACCTAGAAGGGAAAGTGGCACCGCTAGTGATTCAGAGGTAAAACAGAAGTCATCTAAGAAGGTTTCTACTGGGAATTCTAAGGAGAATAATACTTCAGTTGTGGTAGATGCACCTAGAAAGGAAAGTAGCAGCACAAGTGATTCAGAGGCAAGACAGAAGTTAGCTAAGAAGGTTGATGGAAGCAATAAGACTAGTGATGAGTCTTCTTTGAAGCAGCCAGAAGATAAGAAGAAGCGTGCACGCAGTAAAGTTTCTTCAAGAAGAAGCTCAACAAAATCCTCGGCCATGGAAGTTGACAAGGAGATATTGTCGACACCCAAGTCAAAATCTACCAAGAATGAACTTCCATTGGAGGAGACTCCTAAGACAAATTCCAAGAGGAAGCGTCCTTTGGAAAAAGAAAAGCAATCTGGTGTAAAAGAGTTTGATGACACTGAGGTGATTGGTTCAAAGATAAAAGTTTGGTGGCCAGCGGATCGCATGTATTATAAAGGTGTTGTCCATTCTTTTGATTCTGTTAAAAAGAAGCATGTGGTGAAATATAATGATGGAGATCAGGAAATTTTGAATCTTAAAAGAGAGAAATGGCTGTATGTAGAAGGTGACTCTGAATCAGATGGGGAGCAGGAAAATGATGAGTCAAGTCACGATGGCTCTTCTGAACTGCCCCTGAAGAAGAAAGCGAAAAGTATTCGTGATGGATCAACTAAGAAAGAAAAGATGGATGCTACACCCAAATCGGGTGGAGGAGCTTCCTCCAGCAAATCAAAAGGCAGAACCACAAAGTCTGGTCGTAAGCAGAGAGACAGCAGTAAACCTGATGGCAGATCCAAAGGTGATACATCCAAGGCTGTTGGCAAAACAGATGATGATCGTGTTGGAAAATTAAAGGATCAAACTCCAAAAAGTAGTGGTAAATCAGTGGATGTTGCTCAGAAGACATCCAGCAAATCAAAGAACAATGAGTCCCAGACACCTAAGAGTAGCAAATCCAAGGAGGATGATAGCAACACCCAAAGAGCCTCAATTAAGTCCAAGCAAGACACGCAGAAGGCTGGGAAGTCAAATCAAGGCACACCAAAGACTAGTGCCTCCACTCCCAAGGGTAAATCCTCTCTGAGTAGTAGCAAAGCAAATGGCAAGGTGAAATCTGGTTCAAAAGCAAGAGAGAGTGAGGATATGGAGGAGGACTCTACTGATTCGGAAAAAGCACCAGAAAGGACCAAGGGAAAGTCAACAAGTTCTAAGGCACAGGGAAGCCAGACCAAGTCTGGTAAGAAGCGAAGGAGAGGAACCAAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

957

Amino Acids

103.52

Weight (kDa)

5.59

Isoelectric Point (pI)

50.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 228 5e-49 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2055
AasI GACNNNNNNGTC 1 cut(s) 1885
AccB1I GGYRCC 1 cut(s) 1583
AccI GTMKAC 2 cut(s) 78, 1877
AciI CCGC 8 cut(s) 65, 159, 864, 1107, 1196, 1559, 1587, 2039
AclWI GGATC 9 cut(s) 209, 426, 884, 900, 913, 2049, 2275, 2388, 2466
AcoI YGGCCR 2 cut(s) 1848, 2033
AcsI RAATTY 4 cut(s) 856, 1639, 1936, 2127
AcuI CTGAAG 4 cut(s) 1236, 1254, 1644, 2258
AdeI CACNNNGTG 1 cut(s) 1148
AfiI CCNNNNNNNGG 3 cut(s) 682, 1353, 2306
AflII CTTAAG 1 cut(s) 665
AhlI ACTAGT 2 cut(s) 1757, 2651
AjnI CCWGG 3 cut(s) 57, 675, 840
AjuI GAANNNNNNNTTGG 2 cut(s) 1940, 1972
AleI CACNNNNGTG 1 cut(s) 2003
AloI GAACNNNNNNTCC 2 cut(s) 2516, 2548
Alw21I GWGCWC 2 cut(s) 24, 1807
Alw26I GTCTC 6 cut(s) 506, 743, 1055, 1522, 1916, 2364
Alw44I GTGCAC 1 cut(s) 1803
AlwI GGATC 9 cut(s) 209, 426, 884, 900, 913, 2049, 2275, 2388, 2466
AlwNI CAGNNNCTG 4 cut(s) 218, 275, 402, 944
AoxI GGCC 2 cut(s) 1848, 2033
ApaLI GTGCAC 1 cut(s) 1803
ApeKI GCWGC 5 cut(s) 866, 938, 1259, 1695, 1780
ApoI RAATTY 4 cut(s) 856, 1639, 1936, 2127
ArsI GACNNNNNNTTYG 4 cut(s) 383, 415, 539, 571
Asp700I GAANNNNTTC 1 cut(s) 497
AspS9I GGNCC 3 cut(s) 399, 1022, 2787
AsuC2I CCSGG 1 cut(s) 818
AvaII GGWCC 3 cut(s) 399, 1022, 2787
BaeGI GKGCMC 1 cut(s) 1807
BalI TGGCCA 1 cut(s) 2035
BamHI GGATCC 1 cut(s) 905
BanI GGYRCC 1 cut(s) 1583
BanII GRGCYC 1 cut(s) 24
BarI GAAGNNNNNNTAC 2 cut(s) 1804, 1836
BauI CACGAG 1 cut(s) 1236
BbsI GAAGAC 3 cut(s) 552, 1761, 2510
Bbv12I GWGCWC 2 cut(s) 24, 1807
BbvI GCAGC 5 cut(s) 878, 950, 1271, 1707, 1792
BceAI ACGGC 1 cut(s) 52
BcgI CGANNNNNNTGC 2 cut(s) 635, 669
BciT130I CCWGG 3 cut(s) 59, 677, 842
BclI TGATCA 1 cut(s) 193
BcnI CCSGG 1 cut(s) 818
BcoDI GTCTC 6 cut(s) 506, 743, 1055, 1522, 1916, 2364
BcuI ACTAGT 2 cut(s) 1757, 2651
BfaI CTAG 7 cut(s) 332, 582, 1569, 1590, 1680, 1758, 2652
BfrI CTTAAG 1 cut(s) 665
BisI GCNGC 7 cut(s) 65, 159, 867, 939, 1260, 1696, 1781
BlsI GCNGC 7 cut(s) 66, 160, 868, 940, 1261, 1697, 1782
Bme1390I CCNGG 4 cut(s) 59, 677, 818, 842
Bme18I GGWCC 3 cut(s) 399, 1022, 2787
BmgT120I GGNCC 3 cut(s) 399, 1022, 2787
BmiI GGNNCC 6 cut(s) 63, 907, 1245, 1358, 1585, 2860
BmrFI CCNGG 4 cut(s) 59, 677, 818, 842
BmrI ACTGGG 3 cut(s) 954, 1221, 1644
BmsI GCATC 9 cut(s) 14, 255, 268, 421, 1069, 1210, 1552, 1663, 2281
BmuI ACTGGG 3 cut(s) 954, 1221, 1644
BpiI GAAGAC 3 cut(s) 552, 1761, 2510
BplI GAGNNNNNCTC 2 cut(s) 2741, 2773
BpmI CTGGAG 2 cut(s) 80, 2308
BpuEI CTTGAG 2 cut(s) 449, 1146
BpuMI CCSGG 1 cut(s) 818
Bsa29I ATCGAT 1 cut(s) 506
BsaBI GATNNNNATC 3 cut(s) 1296, 2118, 2436
BsaI GGTCTC 1 cut(s) 1522
BsaJI CCNNGG 9 cut(s) 697, 1008, 1185, 1845, 1851, 2412, 2559, 2667, 2790
BsaXI ACNNNNNCTCC 6 cut(s) 53, 83, 791, 821, 1859, 1889
Bsc4I CCNNNNNNNGG 3 cut(s) 682, 1353, 2306
Bse1I ACTGG 4 cut(s) 345, 949, 1227, 1639
Bse3DI GCAATG 1 cut(s) 702
Bse8I GATNNNNATC 3 cut(s) 1296, 2118, 2436
BseBI CCWGG 3 cut(s) 59, 677, 842
BseCI ATCGAT 1 cut(s) 506
BseDI CCNNGG 9 cut(s) 697, 1008, 1185, 1845, 1851, 2412, 2559, 2667, 2790
BseGI GGATG 8 cut(s) 368, 1343, 1567, 2296, 2408, 2497, 2507, 2572
BseJI GATNNNNATC 3 cut(s) 1296, 2118, 2436
BseLI CCNNNNNNNGG 3 cut(s) 682, 1353, 2306
BseMI GCAATG 1 cut(s) 702
BseMII CTCAG 5 cut(s) 756, 1056, 1992, 2513, 2675
BseNI ACTGG 4 cut(s) 345, 949, 1227, 1639
BseRI GAGGAG 4 cut(s) 1224, 1934, 2328, 2765
BseSI GKGCMC 1 cut(s) 1807
BseXI GCAGC 5 cut(s) 878, 950, 1271, 1707, 1792
BseYI CCCAGC 3 cut(s) 44, 1523, 2621
BsgI GTGCAG 2 cut(s) 957, 1170
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 2 cut(s) 1850, 2035
BshNI GGYRCC 1 cut(s) 1583
BshVI ATCGAT 1 cut(s) 506
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 2 cut(s) 24, 1807
BsiSI CCGG 1 cut(s) 817
BslFI GGGAC 3 cut(s) 1362, 1533, 2518
BslI CCNNNNNNNGG 3 cut(s) 682, 1353, 2306
BsmAI GTCTC 6 cut(s) 506, 743, 1055, 1522, 1916, 2364
BsmFI GGGAC 3 cut(s) 1362, 1533, 2518
BsmI GAATGC 2 cut(s) 208, 431
BsnI GGCC 2 cut(s) 1850, 2035
Bso31I GGTCTC 1 cut(s) 1522
Bsp1286I GDGCHC 2 cut(s) 24, 1807
Bsp19I CCATGG 2 cut(s) 697, 1851
BspACI CCGC 8 cut(s) 65, 159, 864, 1107, 1196, 1559, 1587, 2039
BspANI GGCC 2 cut(s) 1850, 2035
BspCNI CTCAG 5 cut(s) 757, 1057, 1993, 2512, 2676
BspDI ATCGAT 1 cut(s) 506
BspLI GGNNCC 6 cut(s) 63, 907, 1245, 1358, 1585, 2860
BspPI GGATC 9 cut(s) 209, 426, 884, 900, 913, 2049, 2275, 2388, 2466
BspQI GCTCTTC 1 cut(s) 2227
BspT107I GGYRCC 1 cut(s) 1583
BspTI CTTAAG 1 cut(s) 665
BspTNI GGTCTC 1 cut(s) 1522
BsrDI GCAATG 1 cut(s) 702
BsrI ACTGG 4 cut(s) 345, 949, 1227, 1639
BssECI CCNNGG 9 cut(s) 697, 1008, 1185, 1845, 1851, 2412, 2559, 2667, 2790
BssSI CACGAG 1 cut(s) 1236
BssT1I CCWWGG 6 cut(s) 697, 1851, 2412, 2559, 2667, 2790
Bst2BI CACGAG 1 cut(s) 1236
Bst2UI CCWGG 3 cut(s) 59, 677, 842
Bst4CI ACNGT 5 cut(s) 76, 171, 385, 722, 1157
Bst6I CTCTTC 3 cut(s) 99, 825, 2227
BstAFI CTTAAG 1 cut(s) 665
BstAPI GCANNNNNTGC 2 cut(s) 278, 1148
BstC8I GCNNGC 4 cut(s) 156, 1803, 1807, 2037
BstDSI CCRYGG 2 cut(s) 697, 1851
BstENI CCTNNNNNAGG 1 cut(s) 680
BstF5I GGATG 8 cut(s) 368, 1343, 1567, 2296, 2408, 2497, 2507, 2572
BstMAI GTCTC 6 cut(s) 506, 743, 1055, 1522, 1916, 2364
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 5 cut(s) 188, 278, 1079, 1148, 2611
BstNI CCWGG 3 cut(s) 59, 677, 842
BstNSI RCATGY 2 cut(s) 2050, 2099
BstSCI CCNGG 4 cut(s) 57, 675, 816, 840
BstSLI GKGCMC 1 cut(s) 1807
BstV1I GCAGC 5 cut(s) 878, 950, 1271, 1707, 1792
BstV2I GAAGAC 3 cut(s) 552, 1761, 2510
BstX2I RGATCY 4 cut(s) 214, 418, 905, 2393
BstXI CCANNNNNNTGG 2 cut(s) 1208, 1312
BstYI RGATCY 4 cut(s) 214, 418, 905, 2393
Bsu15I ATCGAT 1 cut(s) 506
BsuRI GGCC 2 cut(s) 1850, 2035
BsuTUI ATCGAT 1 cut(s) 506
BtgI CCRYGG 2 cut(s) 697, 1851
BtgZI GCGATG 1 cut(s) 444
BtsCI GGATG 8 cut(s) 368, 1343, 1567, 2296, 2408, 2497, 2507, 2572
BtsI GCAGTG 1 cut(s) 1305
BtsIMutI CAGTG 5 cut(s) 256, 762, 1305, 1998, 2493
Cac8I GCNNGC 4 cut(s) 156, 1803, 1807, 2037
CaiI CAGNNNCTG 4 cut(s) 218, 275, 402, 944
Cfr13I GGNCC 3 cut(s) 399, 1022, 2787
ClaI ATCGAT 1 cut(s) 506
CseI GACGC 2 cut(s) 228, 1940
CspCI CAANNNNNGTGG 2 cut(s) 2290, 2325
CviAII CATG 5 cut(s) 698, 782, 1852, 2047, 2096
DraI TTTAAA 1 cut(s) 981
DraIII CACNNNGTG 1 cut(s) 1148
DrdI GACNNNNNNGTC 1 cut(s) 1885
DseDI GACNNNNNNGTC 1 cut(s) 1885
EaeI YGGCCR 2 cut(s) 1848, 2033
Eam1104I CTCTTC 3 cut(s) 99, 825, 2227
EarI CTCTTC 3 cut(s) 99, 825, 2227
EciI GGCGGA 2 cut(s) 1185, 1574
Ecl136II GAGCTC 1 cut(s) 22
Eco130I CCWWGG 6 cut(s) 697, 1851, 2412, 2559, 2667, 2790
Eco24I GRGCYC 1 cut(s) 24
Eco31I GGTCTC 1 cut(s) 1522
Eco47I GGWCC 3 cut(s) 399, 1022, 2787
Eco53kI GAGCTC 1 cut(s) 22
Eco57I CTGAAG 4 cut(s) 1236, 1254, 1644, 2258
EcoICRI GAGCTC 1 cut(s) 22
EcoNI CCTNNNNNAGG 1 cut(s) 680
EcoO109I RGGNCCY 1 cut(s) 399
EcoRI GAATTC 1 cut(s) 1639
EcoRII CCWGG 3 cut(s) 57, 675, 840
EcoT14I CCWWGG 6 cut(s) 697, 1851, 2412, 2559, 2667, 2790
EcoT22I ATGCAT 1 cut(s) 436
EcoT38I GRGCYC 1 cut(s) 24
ErhI CCWWGG 6 cut(s) 697, 1851, 2412, 2559, 2667, 2790
FaeI CATG 5 cut(s) 701, 785, 1855, 2050, 2099
FalI AAGNNNNNCTT 2 cut(s) 147, 179
FaqI GGGAC 3 cut(s) 1362, 1533, 2518
FatI CATG 5 cut(s) 697, 781, 1851, 2046, 2095
FauI CCCGC 1 cut(s) 1100
FauNDI CATATG 1 cut(s) 286
FbaI TGATCA 1 cut(s) 193
FblI GTMKAC 2 cut(s) 78, 1877
Fnu4HI GCNGC 7 cut(s) 65, 159, 867, 939, 1260, 1696, 1781
FokI GGATG 8 cut(s) 355, 1330, 1574, 2303, 2395, 2494, 2504, 2579
FriOI GRGCYC 1 cut(s) 24
Fsp4HI GCNGC 7 cut(s) 65, 159, 867, 939, 1260, 1696, 1781
FspBI CTAG 7 cut(s) 332, 582, 1569, 1590, 1680, 1758, 2652
GluI GCNGC 7 cut(s) 65, 159, 867, 939, 1260, 1696, 1781
GsaI CCCAGC 3 cut(s) 48, 1527, 2625
GsuI CTGGAG 2 cut(s) 80, 2308
HaeIII GGCC 2 cut(s) 1850, 2035
HapII CCGG 1 cut(s) 817
HgaI GACGC 2 cut(s) 228, 1940
Hin1II CATG 5 cut(s) 701, 785, 1855, 2050, 2099
HincII GTYRAC 6 cut(s) 79, 810, 1137, 1861, 1878, 2802
HindII GTYRAC 6 cut(s) 79, 810, 1137, 1861, 1878, 2802
HindIII AAGCTT 1 cut(s) 305
HpaII CCGG 1 cut(s) 817
Hpy166II GTNNAC 9 cut(s) 72, 79, 810, 1137, 1805, 1861, 1878, 2381, 2802
Hpy8I GTNNAC 9 cut(s) 72, 79, 810, 1137, 1805, 1861, 1878, 2381, 2802
Hpy99I CGWCG 2 cut(s) 80, 83
HpyCH4III ACNGT 5 cut(s) 76, 171, 385, 722, 1157
HpyCH4IV ACGT 1 cut(s) 1147
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 278, 1079, 1148, 2611
HpySE526I ACGT 1 cut(s) 1147
Hsp92II CATG 5 cut(s) 701, 785, 1855, 2050, 2099
Ksp22I TGATCA 1 cut(s) 193
LguI GCTCTTC 1 cut(s) 2227
LmnI GCTCC 7 cut(s) 61, 991, 1228, 1342, 1356, 2188, 2315
Lsp1109I GCAGC 5 cut(s) 878, 950, 1271, 1707, 1792
LweI GCATC 9 cut(s) 14, 255, 268, 421, 1069, 1210, 1552, 1663, 2281
MaeI CTAG 7 cut(s) 332, 582, 1569, 1590, 1680, 1758, 2652
MaeII ACGT 1 cut(s) 1147
MaeIII GTNAC 5 cut(s) 171, 758, 1435, 2168, 2210
MflI RGATCY 4 cut(s) 214, 418, 905, 2393
MhlI GDGCHC 2 cut(s) 24, 1807
MlsI TGGCCA 1 cut(s) 2035
MluNI TGGCCA 1 cut(s) 2035
MlyI GAGTC 6 cut(s) 1775, 1918, 2165, 2213, 2540, 2750
MmeI TCCRAC 3 cut(s) 396, 1269, 2425
Mox20I TGGCCA 1 cut(s) 2035
Mph1103I ATGCAT 1 cut(s) 436
MroXI GAANNNNTTC 1 cut(s) 497
MscI TGGCCA 1 cut(s) 2035
MslI CAYNNNNRTG 2 cut(s) 1206, 2003
Msp20I TGGCCA 1 cut(s) 2035
MspA1I CMGCKG 3 cut(s) 755, 1262, 2039
MspCI CTTAAG 1 cut(s) 665
MspI CCGG 1 cut(s) 817
MspR9I CCNGG 4 cut(s) 59, 677, 818, 842
Mva1269I GAATGC 2 cut(s) 208, 431
MvaI CCWGG 3 cut(s) 59, 677, 842
MwoI GCNNNNNNNGC 5 cut(s) 188, 278, 1079, 1148, 2611
NciI CCSGG 1 cut(s) 818
NcoI CCATGG 2 cut(s) 697, 1851
NdeI CATATG 1 cut(s) 286
NlaIII CATG 5 cut(s) 701, 785, 1855, 2050, 2099
NlaIV GGNNCC 6 cut(s) 63, 907, 1245, 1358, 1585, 2860
NmeAIII GCCGAG 1 cut(s) 1826
NmuCI GTSAC 4 cut(s) 171, 758, 2168, 2210
NsiI ATGCAT 1 cut(s) 436
NspI RCATGY 2 cut(s) 2050, 2099
OliI CACNNNNGTG 1 cut(s) 2003
PciSI GCTCTTC 1 cut(s) 2227
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 2 cut(s) 208, 431
PdmI GAANNNNTTC 1 cut(s) 497
PflFI GACNNNGTC 2 cut(s) 104, 2833
PfoI TCCNGGA 2 cut(s) 57, 816
PkrI GCNGC 7 cut(s) 66, 160, 868, 940, 1261, 1697, 1782
PleI GAGTC 6 cut(s) 1774, 1918, 2165, 2212, 2539, 2750
PpsI GAGTC 6 cut(s) 1774, 1918, 2165, 2212, 2539, 2750
PpuMI RGGWCCY 1 cut(s) 399
PsiI TTATAA 1 cut(s) 2055
Psp124BI GAGCTC 1 cut(s) 24
Psp5II RGGWCCY 1 cut(s) 399
Psp6I CCWGG 3 cut(s) 57, 675, 840
PspFI CCCAGC 3 cut(s) 44, 1523, 2621
PspGI CCWGG 3 cut(s) 57, 675, 840
PspN4I GGNNCC 6 cut(s) 63, 907, 1245, 1358, 1585, 2860
PspPI GGNCC 3 cut(s) 399, 1022, 2787
PspPPI RGGWCCY 1 cut(s) 399
PstNI CAGNNNCTG 4 cut(s) 218, 275, 402, 944
PsuI RGATCY 4 cut(s) 214, 418, 905, 2393
PsyI GACNNNGTC 2 cut(s) 104, 2833
PvuII CAGCTG 2 cut(s) 755, 1262
RseI CAYNNNNRTG 2 cut(s) 1206, 2003
SacI GAGCTC 1 cut(s) 24
SalI GTCGAC 2 cut(s) 77, 1876
SapI GCTCTTC 1 cut(s) 2227
SatI GCNGC 7 cut(s) 65, 159, 867, 939, 1260, 1696, 1781
Sau96I GGNCC 3 cut(s) 399, 1022, 2787
SchI GAGTC 6 cut(s) 1775, 1918, 2165, 2213, 2540, 2750
ScrFI CCNGG 4 cut(s) 59, 677, 818, 842
SduI GDGCHC 2 cut(s) 24, 1807
SfaNI GCATC 9 cut(s) 14, 255, 268, 421, 1069, 1210, 1552, 1663, 2281
SgrDI CGTCGACG 1 cut(s) 77
SinI GGWCC 3 cut(s) 399, 1022, 2787
SmiMI CAYNNNNRTG 2 cut(s) 1206, 2003
SmlI CTYRAG 3 cut(s) 464, 665, 1161
SmoI CTYRAG 3 cut(s) 464, 665, 1161
SpeI ACTAGT 2 cut(s) 1757, 2651
SsiI CCGC 8 cut(s) 65, 159, 864, 1107, 1196, 1559, 1587, 2039
SspMI CTAG 7 cut(s) 332, 582, 1569, 1590, 1680, 1758, 2652
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 4 cut(s) 57, 675, 816, 840
StyI CCWWGG 6 cut(s) 697, 1851, 2412, 2559, 2667, 2790
TaaI ACNGT 5 cut(s) 76, 171, 385, 722, 1157
TaiI ACGT 1 cut(s) 1150
TaqII GACCGA 1 cut(s) 26
TauI GCSGC 2 cut(s) 67, 161
TscAI CASTG 5 cut(s) 256, 769, 1312, 2005, 2493
TseFI GTSAC 4 cut(s) 171, 758, 2168, 2210
TseI GCWGC 5 cut(s) 866, 938, 1259, 1695, 1780
Tsp45I GTSAC 4 cut(s) 171, 758, 2168, 2210
TspDTI ATGAA 7 cut(s) 317, 789, 938, 969, 1383, 1461, 1920
TspRI CASTG 5 cut(s) 256, 769, 1312, 2005, 2493
Tth111I GACNNNGTC 2 cut(s) 104, 2833
Vha464I CTTAAG 1 cut(s) 665
VneI GTGCAC 1 cut(s) 1803
VpaK11BI GGWCC 3 cut(s) 399, 1022, 2787
XagI CCTNNNNNAGG 1 cut(s) 680
XapI RAATTY 4 cut(s) 856, 1639, 1936, 2127
XbaI TCTAGA 1 cut(s) 331
XceI RCATGY 2 cut(s) 2050, 2099
XcmI CCANNNNNNNNNTGG 2 cut(s) 752, 2834
XmiI GTMKAC 2 cut(s) 78, 1877
XmnI GAANNNNTTC 1 cut(s) 497
XspI CTAG 7 cut(s) 332, 582, 1569, 1590, 1680, 1758, 2652
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.