AT4G32010

B3 domain-containing transcription repressor VAL2 isoform X1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
15479379 .. 15485354
5976 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G32010.2

Sequence Viewer

Length: 2343 bp
ATGGAGTCAATAAAGGTTTGCATGAACGCACTGTGCGGAGCGGCCTCTACGTCGGGCGAGTGGAAAAAAGGCTGGCCTATGCGATCCGGTGATTTAGCTTCTCTCTGCGATAAGTGTGGGTGTGCATACGAGCAATCCATATTCTGTGAAGTGTTCCATGCCAAGGAATCTGGTTGGAGAGAGTGTAATTCATGTGACAAGCGTCTTCACTGTGGATGCATTGCTTCTAGATTTATGATGGAGCTTCTAGAGAATGGTGGTGTTACCTGTATAAGTTGCGCCAAGAAATCCGGACTAATTTCTATGAATGTGAGCCATGAATCTAACGGTAAGGACTTCCCCTCATTTGCTTCAGCAGAGCATGTAGGCAGTGTTCTTGAGAGGACAAATCTCAAGCACTTGCTTCACTTTCAAAGAATCGACCCCACTCATTCTTCTCTTCAAATGAAACAAGAAGAATCGCTGCTTCCTTCCAGCCTAGATGCTCTTAGACACAAAACTGAAAGGAAAGAATTGTCTGCACAGCCAAACTTGAGCATTTCACTTGGACCTACGCTTATGACAAGCCCATTTCATGATGCTGCTGTTGATGACAGAAGTAAGACTAATTCGATTTTCCAACTGGCCCCTCGGTCCAGGCAGCTGCTTCCAAAACCTGCAAATTCAGCTCCCATTGCTGCTGGCATGGAGCCTAGTGGGAGCCTGGTGTCACAGATTCATGTCGCTCGGCCTCCTCCAGAAGGTCGCGGGAAGACCCAATTGCTTCCCCGTTACTGGCCTAGGATTACTGACCAAGAGCTGCTGCAATTATCTGGACAGTATCCTCATCTCTCAAATTCCAAAATTATACCACTCTTTGAAAAAGTTCTGAGTGCGAGCGATGCGGGTCGTATTGGTCGACTGGTTCTTCCGAAAGCATGTGCAGAGGCATATTTCCCCCCTATATCTCTACCCGAGGGTCTCCCGTTAAAGATACAAGACATAAAAGGGAAAGAATGGGTGTTCCAGTTCAGGTTTTGGCCTAATAATAACAGCAGGATGTACGTTTTGGAGGGTGTGACTCCTTGCATACAGTCCATGCAGTTGCAAGCTGGTGACACTGTAACATTCAGCCGTACAGAACCTGAAGGAAAACTCGTAATGGGATACCGTAAAGCGACGAACTCTACAGCGACACAGATGTTCAAGGGAAGCAGTGAACCCAATCTGAACATGTTTTCCAACAGCTTGAATCCGGGATGTGGTGACATCAATTGGTCTAAACTAGAGAAGTCTGAGGACATGGCAAAGGATAACTTATTTCTTCAGTCGTCCTTAACTTCTGCTAGGAAACGGGTTCGGAACATTGGGACTAAGAGCAAGCGTCTGCTCATTGATAGCGTAGATGTTCTGGAACTGAAAATAACTTGGGAGGAGGCACAGGAGCTGTTGCGGCCTCCCCAATCCACCAAACCCAGCATCTTTACGCTGGAAAATCAAGATTTTGAAGAATATGACGAACCACCAGTTTTCGGGAAGAGGACCCTTTTTGTCTCACGTCAAACAGGGGAACAAGAGCAATGGGTGCAGTGTGATGCTTGTGGGAAATGGCGACAGCTGCCGGTGGATATTCTTCTTCCACCAAAGTGGTCGTGCTCTGATAATCTCTTGGATCCTGGCAGGTCTTCATGTTCCGCACCTGATGAACTCTCTCCAAGAGAACAGGATACACTTGTCCGGCAGAGCAAAGAGTTCAAAAGGAGGAGACTGGCATCATCAAACGAAAAGCTAAACCAGTCGCAGGATGCATCTGCTCTGAATAGTTTAGGAAATGCAGGCATCACCACAACCGGTGAACAGGGGGAAATCACGGTTGCAGCCACGACCAAGCATCCAAGACACCGGGCAGGGTGTTCGTGCATCGTCTGCAGCCAACCACCGAGCGGAAAAGGCAAACACAAGCCGTCATGCACTTGCACTGTGTGCGAGGCAGTGAAGAGACGATTCAGGACGCTCATGCTGCGGAAGCGGAACAAAGGAGAGGCAGGACAGGCAAGCCAGCAGGCGCAGTCACAGTCAGAGTGCAGGGACGAGACAGAAGTGGAGAGCATTCCAGCGGTTGAACTAGCCGCAGGGGAAAACATCGACTTGAACTCAGACCCGGGGGCTTCCCGAGTAAGCATGATGAGGCTTCTCCAAGCTGCAGCGTTTCCTCTGGAAGCATATCTGAAACAAAAGGCTATTTCCAATACAGCAGGAGAACAGCAAAGCAGTGATATGGTCAGCACAGAACACGGTTCGTCCTCAGCCGCACAAGAAACTGAGAAAGACACAACAAATGGAGCTCATGATCCTGTGAACTAA

Protein Analysis

780

Amino Acids

86.01

Weight (kDa)

8.05

Isoelectric Point (pI)

51.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf_VAL1_N PF25813 51 - 98 4.3e-23 VAL1-like, N-terminal zinc finger domain
B3 PF02362 282 - 380 2e-15 B3 DNA binding domain
zf-CW PF07496 516 - 558 6.6e-13 CW-type Zinc Finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 664, 1650
AccBSI CCGCTC 2 cut(s) 41, 1923
AccI GTMKAC 1 cut(s) 898
AccII CGCG 1 cut(s) 747
AccIII TCCGGA 1 cut(s) 290
AclWI GGATC 4 cut(s) 78, 1646, 1659, 2324
AcsI RAATTY 2 cut(s) 661, 835
AcuI CTGAAG 3 cut(s) 336, 1146, 1289
AdeI CACNNNGTG 1 cut(s) 1962
AfaI GTAC 2 cut(s) 1043, 1117
AfiI CCNNNNNNNGG 7 cut(s) 163, 740, 774, 1241, 1511, 1780, 1922
AflIII ACRYGT 1 cut(s) 1212
AgeI ACCGGT 1 cut(s) 1829
AgsI TTSAA 9 cut(s) 413, 443, 860, 1186, 1231, 1487, 1735, 2102, 2131
AjiI CACGTC 1 cut(s) 1538
AjnI CCWGG 3 cut(s) 635, 702, 1654
AleI CACNNNNGTG 1 cut(s) 1624
AloI GAACNNNNNNTCC 2 cut(s) 1202, 1234
Alw21I GWGCWC 2 cut(s) 1637, 2326
Alw26I GTCTC 5 cut(s) 965, 1537, 1738, 1972, 2066
AlwI GGATC 4 cut(s) 78, 1646, 1659, 2324
AlwNI CAGNNNCTG 2 cut(s) 1124, 1426
Ama87I CYCGRG 3 cut(s) 953, 2140, 2151
Aor13HI TCCGGA 1 cut(s) 290
AoxI GGCC 7 cut(s) 42, 74, 624, 728, 776, 1019, 1433
ApoI RAATTY 2 cut(s) 661, 835
AsiGI ACCGGT 1 cut(s) 1829
Asp700I GAANNNNTTC 1 cut(s) 864
AspA2I CCTAGG 1 cut(s) 779
AspLEI GCGC 2 cut(s) 281, 2047
AspS9I GGNCC 4 cut(s) 548, 625, 633, 1521
AsuC2I CCSGG 4 cut(s) 1236, 1883, 2141, 2142
AsuHPI GGTGA 5 cut(s) 101, 1106, 1256, 1813, 1844
AvaI CYCGRG 3 cut(s) 953, 2140, 2151
AvaII GGWCC 3 cut(s) 548, 633, 1521
AvrII CCTAGG 1 cut(s) 779
BaeI ACNNNNGTAYC 2 cut(s) 1698, 1731
BamHI GGATCC 1 cut(s) 1651
BanII GRGCYC 1 cut(s) 2326
BbsI GAAGAC 3 cut(s) 197, 758, 1656
Bbv12I GWGCWC 2 cut(s) 1637, 2326
BbvCI CCTCAGC 1 cut(s) 2284
BccI CCATC 1 cut(s) 232
BceAI ACGGC 2 cut(s) 1098, 1927
BcgI CGANNNNNNTGC 2 cut(s) 1875, 1909
BciT130I CCWGG 3 cut(s) 637, 704, 1656
BciVI GTATCC 3 cut(s) 831, 1139, 1699
BcnI CCSGG 4 cut(s) 1236, 1883, 2141, 2142
BcoDI GTCTC 5 cut(s) 965, 1537, 1738, 1972, 2066
BfaI CTAG 8 cut(s) 228, 248, 479, 693, 780, 1265, 1326, 2105
BfmI CTRYAG 3 cut(s) 1167, 1906, 2181
BfuAI ACCTGC 2 cut(s) 664, 1650
BfuI GTATCC 3 cut(s) 831, 1139, 1699
BlnI CCTAGG 1 cut(s) 779
Bme1390I CCNGG 7 cut(s) 637, 704, 1236, 1656, 1883, 2141, 2142
Bme18I GGWCC 3 cut(s) 548, 633, 1521
BmeT110I CYCGRG 3 cut(s) 953, 2140, 2151
BmgBI CACGTC 1 cut(s) 1538
BmgT120I GGNCC 4 cut(s) 548, 625, 633, 1521
BmiI GGNNCC 5 cut(s) 627, 690, 701, 1523, 1653
BmrFI CCNGG 7 cut(s) 637, 704, 1236, 1656, 1883, 2141, 2142
BoxI GACNNNNGTC 1 cut(s) 201
BpiI GAAGAC 3 cut(s) 197, 758, 1656
BpmI CTGGAG 1 cut(s) 720
Bpu10I CCTNAGC 1 cut(s) 2284
BpuEI CTTGAG 3 cut(s) 377, 398, 553
BpuMI CCSGG 4 cut(s) 1236, 1883, 2141, 2142
BsaI GGTCTC 1 cut(s) 965
BsaJI CCNNGG 6 cut(s) 162, 629, 779, 954, 2140, 2141
BsaWI WCCGGW 3 cut(s) 86, 290, 1829
BsaXI ACNNNNNCTCC 2 cut(s) 169, 199
Bsc4I CCNNNNNNNGG 7 cut(s) 163, 740, 774, 1241, 1511, 1780, 1922
Bse118I RCCGGY 2 cut(s) 1600, 1829
Bse1I ACTGG 7 cut(s) 627, 779, 906, 1006, 1505, 1752, 1774
Bse3DI GCAATG 3 cut(s) 219, 672, 1565
BseAI TCCGGA 1 cut(s) 290
BseBI CCWGG 3 cut(s) 637, 704, 1656
BseDI CCNNGG 6 cut(s) 162, 629, 779, 954, 2140, 2141
BseGI GGATG 5 cut(s) 221, 1044, 1244, 1789, 1870
BseLI CCNNNNNNNGG 7 cut(s) 163, 740, 774, 1241, 1511, 1780, 1922
BseMI GCAATG 3 cut(s) 219, 672, 1565
BseMII CTCAG 5 cut(s) 860, 1266, 2148, 2292, 2298
BseNI ACTGG 7 cut(s) 627, 779, 906, 1006, 1505, 1752, 1774
BseRI GAGGAG 3 cut(s) 723, 1427, 1756
BseYI CCCAGC 1 cut(s) 1454
BsgI GTGCAG 4 cut(s) 504, 942, 1586, 2083
Bsh1236I CGCG 1 cut(s) 747
BshFI GGCC 7 cut(s) 44, 76, 626, 730, 778, 1021, 1435
BshTI ACCGGT 1 cut(s) 1829
BsiHKAI GWGCWC 2 cut(s) 1637, 2326
BsiHKCI CYCGRG 3 cut(s) 953, 2140, 2151
BsiSI CCGG 8 cut(s) 87, 291, 1235, 1601, 1717, 1830, 1882, 2141
BslFI GGGAC 2 cut(s) 1363, 2081
BslI CCNNNNNNNGG 7 cut(s) 163, 740, 774, 1241, 1511, 1780, 1922
BsmAI GTCTC 5 cut(s) 965, 1537, 1738, 1972, 2066
BsmBI CGTCTC 1 cut(s) 1972
BsmFI GGGAC 2 cut(s) 1363, 2081
BsmI GAATGC 1 cut(s) 2088
BsnI GGCC 7 cut(s) 44, 76, 626, 730, 778, 1021, 1435
Bso31I GGTCTC 1 cut(s) 965
BsoBI CYCGRG 3 cut(s) 953, 2140, 2151
Bsp1286I GDGCHC 2 cut(s) 1637, 2326
Bsp13I TCCGGA 1 cut(s) 290
Bsp143I GATC 3 cut(s) 83, 1651, 2329
BspANI GGCC 7 cut(s) 44, 76, 626, 730, 778, 1021, 1435
BspCNI CTCAG 5 cut(s) 861, 1267, 2147, 2293, 2297
BspEI TCCGGA 1 cut(s) 290
BspFNI CGCG 1 cut(s) 747
BspHI TCATGA 2 cut(s) 574, 2326
BspLI GGNNCC 5 cut(s) 627, 690, 701, 1523, 1653
BspMAI CTGCAG 2 cut(s) 1910, 2185
BspMI ACCTGC 2 cut(s) 664, 1650
BspPI GGATC 4 cut(s) 78, 1646, 1659, 2324
BspTNI GGTCTC 1 cut(s) 965
BsrBI CCGCTC 2 cut(s) 41, 1923
BsrDI GCAATG 3 cut(s) 219, 672, 1565
BsrFI RCCGGY 2 cut(s) 1600, 1829
BsrI ACTGG 7 cut(s) 627, 779, 906, 1006, 1505, 1752, 1774
BssAI RCCGGY 2 cut(s) 1600, 1829
BssECI CCNNGG 6 cut(s) 162, 629, 779, 954, 2140, 2141
BssMI GATC 3 cut(s) 83, 1651, 2329
BssT1I CCWWGG 2 cut(s) 162, 779
Bst2UI CCWGG 3 cut(s) 637, 704, 1656
Bst6I CTCTTC 3 cut(s) 444, 1511, 1970
BstAPI GCANNNNNTGC 3 cut(s) 1564, 1905, 1962
BstC8I GCNNGC 9 cut(s) 74, 682, 877, 1089, 1361, 1816, 2035, 2039, 2043
BstDEI CTNAG 7 cut(s) 488, 869, 1275, 1353, 2134, 2284, 2301
BstENI CCTNNNNNAGG 1 cut(s) 738
BstF5I GGATG 5 cut(s) 221, 1044, 1244, 1789, 1870
BstFNI CGCG 1 cut(s) 747
BstHHI GCGC 2 cut(s) 281, 2047
BstKTI GATC 3 cut(s) 86, 1654, 2332
BstMAI GTCTC 5 cut(s) 965, 1537, 1738, 1972, 2066
BstMBI GATC 3 cut(s) 83, 1651, 2329
BstNI CCWGG 3 cut(s) 637, 704, 1656
BstNSI RCATGY 3 cut(s) 365, 921, 1216
BstPAI GACNNNNGTC 1 cut(s) 201
BstSCI CCNGG 7 cut(s) 635, 702, 1234, 1654, 1881, 2139, 2140
BstSFI CTRYAG 3 cut(s) 1167, 1906, 2181
BstUI CGCG 1 cut(s) 747
BstV2I GAAGAC 3 cut(s) 197, 758, 1656
BstX2I RGATCY 1 cut(s) 1651
BstXI CCANNNNNNTGG 1 cut(s) 1626
BstYI RGATCY 1 cut(s) 1651
BsuI GTATCC 3 cut(s) 831, 1139, 1699
BsuRI GGCC 7 cut(s) 44, 76, 626, 730, 778, 1021, 1435
BtgZI GCGATG 1 cut(s) 894
BtrI CACGTC 1 cut(s) 1538
BtsCI GGATG 5 cut(s) 221, 1044, 1244, 1789, 1870
BtsI GCAGTG 5 cut(s) 376, 1201, 1574, 1977, 2257
BtsIMutI CAGTG 9 cut(s) 29, 208, 376, 1098, 1201, 1574, 1956, 1977, 2257
BveI ACCTGC 2 cut(s) 664, 1650
Cac8I GCNNGC 9 cut(s) 74, 682, 877, 1089, 1361, 1816, 2035, 2039, 2043
CaiI CAGNNNCTG 2 cut(s) 1124, 1426
CciI TCATGA 2 cut(s) 574, 2326
CfoI GCGC 2 cut(s) 281, 2047
Cfr10I RCCGGY 2 cut(s) 1600, 1829
Cfr13I GGNCC 4 cut(s) 548, 625, 633, 1521
Cfr9I CCCGGG 1 cut(s) 2140
CseI GACGC 3 cut(s) 191, 1352, 1999
Csp6I GTAC 2 cut(s) 1042, 1116
CspAI ACCGGT 1 cut(s) 1829
CviQI GTAC 2 cut(s) 1042, 1116
DdeI CTNAG 7 cut(s) 488, 869, 1275, 1353, 2134, 2284, 2301
DpnI GATC 3 cut(s) 85, 1653, 2331
DpnII GATC 3 cut(s) 83, 1651, 2329
DraIII CACNNNGTG 1 cut(s) 1962
Eam1104I CTCTTC 3 cut(s) 444, 1511, 1970
EarI CTCTTC 3 cut(s) 444, 1511, 1970
Ecl136II GAGCTC 1 cut(s) 2324
Eco130I CCWWGG 2 cut(s) 162, 779
Eco24I GRGCYC 1 cut(s) 2326
Eco31I GGTCTC 1 cut(s) 965
Eco47I GGWCC 3 cut(s) 548, 633, 1521
Eco53kI GAGCTC 1 cut(s) 2324
Eco57I CTGAAG 3 cut(s) 336, 1146, 1289
Eco88I CYCGRG 3 cut(s) 953, 2140, 2151
EcoICRI GAGCTC 1 cut(s) 2324
EcoNI CCTNNNNNAGG 1 cut(s) 738
EcoO109I RGGNCCY 1 cut(s) 1521
EcoRII CCWGG 3 cut(s) 635, 702, 1654
EcoT14I CCWWGG 2 cut(s) 162, 779
EcoT22I ATGCAT 2 cut(s) 221, 1789
EcoT38I GRGCYC 1 cut(s) 2326
ErhI CCWWGG 2 cut(s) 162, 779
Esp3I CGTCTC 1 cut(s) 1972
FalI AAGNNNNNCTT 2 cut(s) 1280, 1312
FaqI GGGAC 2 cut(s) 1363, 2081
FauI CCCGC 2 cut(s) 740, 877
FblI GTMKAC 1 cut(s) 898
FokI GGATG 5 cut(s) 228, 1051, 1251, 1796, 1857
FriOI GRGCYC 1 cut(s) 2326
FspBI CTAG 8 cut(s) 228, 248, 479, 693, 780, 1265, 1326, 2105
GlaI GCGC 2 cut(s) 280, 2046
GsaI CCCAGC 1 cut(s) 1458
GsuI CTGGAG 1 cut(s) 720
HaeIII GGCC 7 cut(s) 44, 76, 626, 730, 778, 1021, 1435
HapII CCGG 8 cut(s) 87, 291, 1235, 1601, 1717, 1830, 1882, 2141
HgaI GACGC 3 cut(s) 191, 1352, 1999
HhaI GCGC 2 cut(s) 281, 2047
Hin6I GCGC 2 cut(s) 279, 2045
HinP1I GCGC 2 cut(s) 279, 2045
HincII GTYRAC 1 cut(s) 899
HindII GTYRAC 1 cut(s) 899
HinfI GANTC 9 cut(s) 5, 167, 320, 417, 458, 715, 1060, 1231, 1983
HpaII CCGG 8 cut(s) 87, 291, 1235, 1601, 1717, 1830, 1882, 2141
HphI GGTGA 5 cut(s) 101, 1106, 1256, 1813, 1844
Hpy166II GTNNAC 4 cut(s) 899, 1199, 1835, 2338
Hpy8I GTNNAC 4 cut(s) 899, 1199, 1835, 2338
Hpy99I CGWCG 2 cut(s) 55, 1162
HpyAV CCTTC 3 cut(s) 480, 734, 1121
HpyCH4IV ACGT 3 cut(s) 50, 1044, 1537
HpyF3I CTNAG 7 cut(s) 488, 869, 1275, 1353, 2134, 2284, 2301
HpySE526I ACGT 3 cut(s) 50, 1044, 1537
HspAI GCGC 2 cut(s) 279, 2045
Kpn2I TCCGGA 1 cut(s) 290
Kzo9I GATC 3 cut(s) 83, 1651, 2329
LmnI GCTCC 7 cut(s) 38, 241, 673, 688, 699, 1423, 2321
MaeI CTAG 8 cut(s) 228, 248, 479, 693, 780, 1265, 1326, 2105
MaeII ACGT 3 cut(s) 50, 1044, 1537
MaeIII GTNAC 9 cut(s) 194, 262, 708, 770, 1057, 1094, 1102, 1244, 2049
MalI GATC 3 cut(s) 85, 1653, 2331
MbiI CCGCTC 2 cut(s) 41, 1923
MboI GATC 3 cut(s) 83, 1651, 2329
MfeI CAATTG 2 cut(s) 758, 1252
MflI RGATCY 1 cut(s) 1651
MhlI GDGCHC 2 cut(s) 1637, 2326
MlyI GAGTC 2 cut(s) 14, 1054
MmeI TCCRAC 3 cut(s) 155, 643, 1245
Mph1103I ATGCAT 2 cut(s) 221, 1789
MroI TCCGGA 1 cut(s) 290
MroXI GAANNNNTTC 1 cut(s) 864
MseI TTAA 2 cut(s) 968, 1316
MslI CAYNNNNRTG 1 cut(s) 1624
MspA1I CMGCKG 3 cut(s) 643, 1597, 2096
MspI CCGG 8 cut(s) 87, 291, 1235, 1601, 1717, 1830, 1882, 2141
MspR9I CCNGG 7 cut(s) 637, 704, 1236, 1656, 1883, 2141, 2142
MunI CAATTG 2 cut(s) 758, 1252
Mva1269I GAATGC 1 cut(s) 2088
MvaI CCWGG 3 cut(s) 637, 704, 1656
MvnI CGCG 1 cut(s) 747
NciI CCSGG 4 cut(s) 1236, 1883, 2141, 2142
NdeII GATC 3 cut(s) 83, 1651, 2329
NlaIV GGNNCC 5 cut(s) 627, 690, 701, 1523, 1653
NmeAIII GCCGAG 1 cut(s) 706
NmuCI GTSAC 6 cut(s) 194, 708, 1057, 1094, 1244, 2049
NsiI ATGCAT 2 cut(s) 221, 1789
NspI RCATGY 3 cut(s) 365, 921, 1216
OliI CACNNNNGTG 1 cut(s) 1624
PagI TCATGA 2 cut(s) 574, 2326
PciI ACATGT 1 cut(s) 1212
PcsI WCGNNNNNNNCGW 1 cut(s) 895
PctI GAATGC 1 cut(s) 2088
PdmI GAANNNNTTC 1 cut(s) 864
PfeI GAWTC 7 cut(s) 167, 320, 417, 458, 715, 1231, 1983
PfoI TCCNGGA 1 cut(s) 1234
PinAI ACCGGT 1 cut(s) 1829
PleI GAGTC 2 cut(s) 13, 1054
PpsI GAGTC 2 cut(s) 13, 1054
PpuMI RGGWCCY 1 cut(s) 1521
PscI ACATGT 1 cut(s) 1212
PshAI GACNNNNGTC 1 cut(s) 201
Psp124BI GAGCTC 1 cut(s) 2326
Psp5II RGGWCCY 1 cut(s) 1521
Psp6I CCWGG 3 cut(s) 635, 702, 1654
PspFI CCCAGC 1 cut(s) 1454
PspGI CCWGG 3 cut(s) 635, 702, 1654
PspN4I GGNNCC 5 cut(s) 627, 690, 701, 1523, 1653
PspPI GGNCC 4 cut(s) 548, 625, 633, 1521
PspPPI RGGWCCY 1 cut(s) 1521
PsrI GAACNNNNNNTAC 2 cut(s) 357, 389
PstI CTGCAG 2 cut(s) 1910, 2185
PstNI CAGNNNCTG 2 cut(s) 1124, 1426
PsuI RGATCY 1 cut(s) 1651
PvuII CAGCTG 2 cut(s) 643, 1597
RsaI GTAC 2 cut(s) 1043, 1117
RsaNI GTAC 2 cut(s) 1042, 1116
RseI CAYNNNNRTG 1 cut(s) 1624
SacI GAGCTC 1 cut(s) 2326
SalI GTCGAC 1 cut(s) 897
SaqAI TTAA 2 cut(s) 968, 1316
Sau3AI GATC 3 cut(s) 83, 1651, 2329
Sau96I GGNCC 4 cut(s) 548, 625, 633, 1521
SchI GAGTC 2 cut(s) 14, 1054
ScrFI CCNGG 7 cut(s) 637, 704, 1236, 1656, 1883, 2141, 2142
SduI GDGCHC 2 cut(s) 1637, 2326
SfcI CTRYAG 3 cut(s) 1167, 1906, 2181
SinI GGWCC 3 cut(s) 548, 633, 1521
SmaI CCCGGG 1 cut(s) 2142
SmiMI CAYNNNNRTG 1 cut(s) 1624
SmlI CTYRAG 3 cut(s) 377, 392, 532
SmoI CTYRAG 3 cut(s) 377, 392, 532
SspMI CTAG 8 cut(s) 228, 248, 479, 693, 780, 1265, 1326, 2105
SstI GAGCTC 1 cut(s) 2326
StyD4I CCNGG 7 cut(s) 635, 702, 1234, 1654, 1881, 2139, 2140
StyI CCWWGG 2 cut(s) 162, 779
TaiI ACGT 3 cut(s) 53, 1047, 1540
TaqI TCGA 4 cut(s) 420, 611, 898, 2124
TaqII GACCGA 1 cut(s) 621
TauI GCSGC 4 cut(s) 44, 1435, 2111, 2291
TfiI GAWTC 7 cut(s) 167, 320, 417, 458, 715, 1231, 1983
Tru1I TTAA 2 cut(s) 968, 1316
Tru9I TTAA 2 cut(s) 968, 1316
TscAI CASTG 9 cut(s) 36, 215, 376, 1105, 1201, 1574, 1963, 1977, 2257
TseFI GTSAC 6 cut(s) 194, 708, 1057, 1094, 1244, 2049
Tsp45I GTSAC 6 cut(s) 194, 708, 1057, 1094, 1244, 2049
TspDTI ATGAA 9 cut(s) 38, 180, 320, 333, 461, 563, 707, 1656, 1698
TspMI CCCGGG 1 cut(s) 2140
TspRI CASTG 9 cut(s) 36, 215, 376, 1105, 1201, 1574, 1963, 1977, 2257
VpaK11BI GGWCC 3 cut(s) 548, 633, 1521
XagI CCTNNNNNAGG 1 cut(s) 738
XapI RAATTY 2 cut(s) 661, 835
XbaI TCTAGA 2 cut(s) 227, 247
XceI RCATGY 3 cut(s) 365, 921, 1216
XmaI CCCGGG 1 cut(s) 2140
XmaJI CCTAGG 1 cut(s) 779
XmiI GTMKAC 1 cut(s) 898
XmnI GAANNNNTTC 1 cut(s) 864
XspI CTAG 8 cut(s) 228, 248, 479, 693, 780, 1265, 1326, 2105
Zsp2I ATGCAT 2 cut(s) 221, 1789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.