Prupe.6G293400_v2.0.a1

B3 domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001663
Physical Location & Seq
Reverse (-)
26966574 .. 26972755
6182 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G293400.5

Sequence Viewer

Length: 2721 bp
ATGGAGCCGCGCACTTGCGTGAACTCAGCTTGCGGGACCTCGAGCTCGATCGAGTGGAAGAAAGGTTGGGCCTTGCGATCTGGAGGATTCGCCAATCTCTGTCCCAAGTGCTGGTCTGCATATGAGCAATCAATTTTTTGTGATATTTTCCACTCAAAAGAATCTGGTTGGAGGGAGTGCATACTATGTGGCAAGCGTCTCCATTGTGGATGCATTGCTTCAATGTTTCTGCTTGATCTTCTAGATGGTGGTGGTGTGAAGTGTATAAAATGTGCAAAAAGTTCAGAACCTCAACCTATTTTAAGTGATGAAAAGCCTGATGGACTTGGAATATCCAAAATCAGTGAGCTGCAACCAACTGCTCAAGACAATCAATTGGATGGAACTAATGTTGAAAAATTGAAGCTTATTCAGTTGGGAAATAATAAAGATTGTAATGGGTTTAGGAACTTGCTTCAGTTTCAGAACAATGACGCAAATGGGTTATTGCAGAAAATGAAACATGCCGATACTCCACCTCCTGTGGGGGAAATTGGAGGCACATGTTTATCAAACTTTAATCTGGCATCCAATGGATCATCTGAAGCTCCCAAAGCAGAAGTTTTCAAAGCAAACTTAGGGATAAATGATATCTATGACTCACTTCCGCAGACAAATTTGAGTATGTCCCTTGGTGCACCTTTGGGAAAAGCAAATCCTGTTCCTGCTGCCATTTTTGATGAAAGGGAACACAGTAAGACATCCTCTCCGCTCTTACCAGGAGCTAGGTCTCGCAATCTTTTTCCAAAGCCCCCAAAATTGGCCCTTGGTGCAGGTTTGGAGGAAAATTCTACAATTGCTTCACACGCACGTGTTGCAAGGCCACCTGCCGAAGGACGGGGGCGGAATCAGCTTCTTCCCCGCTATTGGCCCAGGATTACAGACCAGGAATTACAGCAAATATCTGGAGATTCAAATTCCACAATTGTACCTTTGTTTGAGAAGATGCTAAGTGCCAGTGACGCTGGTCGAATTGGTCGTTTGGTACTCCCTAAAGCATGTGCTGAAGCATATTTTCCTCCCATTTCTCAACCCGAGGGTCTTCCTTTACGGATTCAAGACGTGAAGGGAAAAGAATGGGTGTTTCAGTTCAGATTTTGGCCTAATAATAACAGTAGGATGTATGTTTTGGAGGGTGTAACCCCTTGCATACAGTCCATGCAGTTGCAGGCTGGAGATACTGTGACTTTCAGTCGTATGGATCCTGAAGGAAAACTTATTATGGGGTTTCGGAAAGCATCAAATTCTGTTGCAATGCAGGATACCCATCTTACTGCCATTCACAATGGCGCTCACTCAAGTGAAACTTTCTTTTCGGGTGTTTTTGAGAACCTTCCTGTAATAAGTGGTTACCCTGGCCTTCTTCAGTCACTGAAGGGAAGCATGGATCCCCATCTAAATGCACTGTCCAAACACTTGACTACAGCTAGTGGTGATATTAGCTGGCATAAATCTGAGAAGCAAGAAGGGAGGACAAGGGAAGGCATGCTGCTGCCATCATTACTTGTTCCCGAGAGGAAAAGAACTAGAAATATTGGTTCCAAGAGTAAGAGATTGCTCATCGATAGCCAAGATGCTTTAGAGCTGAAGCTTACTTGGGAAGAGGCTCAGGATTTGCTTCGTCCACCGCCAGCTGCCAAGCCAAGCACTATCATGATTGAAGATCTTGAATTTGAAGAATATGAAGAACCTCCTGTATTTGGAAAGAGGAGTATTTTCATAGTCCGGTCAACTGGGGAACACGAGCAATGGGCGCAGTGTGATAGTTGCTCTAAATGGCGAAGGTTGCCAGTTGATGTTCTACTTCCATCTAAGTGGACATGTGCGGACAATGCTTGGGATCAAAGCAGGCGTTCGTGCTCAGCACCAGATGAATTAGCCCCGAGGGAACTGGAAAGTTTTCTCAGACTGAGTAAGGAATTCAAGAAAAGGAGAACGGTGGCAGACAATAGGCCAACCCAGGAGCATGAATCTTCTGGCCTTGATGCTTTGGCCAATGCTGCAATCCTTGGAGACAATGCGGCTGATCCAGGAACTGCATCAGTTGCTACGACAACAAAACATCCCAGGCATCGTCCTGGCTGCTCATGCATTGTGTGCATCCAGCCCCCCAGTGGGAAGGGCAAACATAAGCCTAACTGCACATGCAATGTGTGCAATACCGTTAAACGCCGTTTTAAAACCCTAATGATAAACAAGAAGAAACGTCAATCAGAGCGAGAGGCAGAGATTGCCTACAGAAACCAGCATGCATGGGGCCCTAGGGATGAAGCAGAAGTAGACAGCACTTCTAGGCACGTATCGTCGCATGTGGATCCTTCAGACAACGAGGCCAGGTCTGCCAACGAATCAGATTCCAAGAGCCAAAGCAAAGTGGCTGAAACTGGGAAGGGAATATTAGACTTGAATTGCCATCCCGGCCGAGAAGGAGAGCTGCAAGCAGGGCCAGACCATGTGAGTATGATGTCTCTTGTTCAAGTAGCAAGCCTTCCTCTTGAGACATATTTAAAACATAATGGTCTTACCAGCTTGATGTCTGAGCAACAGGCAACTAGCTCAACTTCACATGTGCCGCCACAAGCCACTAATGAGAGTGAAGACCAACATAATGAGAATCAATGTCAAGAACAGGAAAGTGGCGGTGAAGAAAGGCCGGATCAAGGCCAAGATGACCCTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3 zf-CW

Protein Analysis

907

Amino Acids

99.7

Weight (kDa)

6.5

Isoelectric Point (pI)

53.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 874
Acc36I ACCTGC 2 cut(s) 803, 874
AccB7I CCANNNNNTGG 1 cut(s) 111
AccBSI CCGCTC 1 cut(s) 751
AccI GTMKAC 1 cut(s) 2319
AccII CGCG 1 cut(s) 10
AcoI YGGCCR 2 cut(s) 2031, 2458
AcsI RAATTY 6 cut(s) 655, 826, 955, 1282, 1709, 1958
AcuI CTGAAG 8 cut(s) 440, 603, 1065, 1266, 1388, 1433, 1646, 2343
AcvI CACGTG 1 cut(s) 851
AfaI GTAC 2 cut(s) 969, 1026
AflIII ACRYGT 4 cut(s) 542, 850, 1859, 2605
AhdI GACNNNNNGTC 1 cut(s) 1230
AjiI CACGTC 1 cut(s) 1102
AjnI CCWGG 9 cut(s) 757, 911, 924, 1393, 1998, 2068, 2105, 2116, 2372
AleI CACNNNNGTG 3 cut(s) 17, 849, 1338
Alw21I GWGCWC 3 cut(s) 47, 679, 1901
Alw26I GTCTC 5 cut(s) 203, 774, 2046, 2511, 2531
Alw44I GTGCAC 1 cut(s) 675
AlwNI CAGNNNCTG 2 cut(s) 1411, 2075
Ama87I CYCGRG 4 cut(s) 40, 1073, 1550, 1921
ApaI GGGCCC 1 cut(s) 2300
ApaLI GTGCAC 1 cut(s) 675
ApeKI GCWGC 8 cut(s) 349, 707, 1528, 1531, 1673, 2039, 2121, 2473
ApoI RAATTY 6 cut(s) 655, 826, 955, 1282, 1709, 1958
Asp700I GAANNNNTTC 1 cut(s) 1938
AspA2I CCTAGG 1 cut(s) 2300
AspLEI GCGC 3 cut(s) 12, 1331, 1795
AspS9I GGNCC 7 cut(s) 36, 69, 802, 909, 2296, 2297, 2483
AsuC2I CCSGG 1 cut(s) 2457
AsuHPI GGTGA 2 cut(s) 1484, 2693
AvaI CYCGRG 4 cut(s) 40, 1073, 1550, 1921
AvaII GGWCC 1 cut(s) 36
AvrII CCTAGG 1 cut(s) 2300
BaeGI GKGCMC 2 cut(s) 679, 2300
BaeI ACNNNNGTAYC 2 cut(s) 951, 984
BalI TGGCCA 1 cut(s) 2033
BamHI GGATCC 3 cut(s) 1240, 1426, 2353
BanII GRGCYC 2 cut(s) 47, 2300
BarI GAAGNNNNNNTAC 2 cut(s) 2511, 2543
BauI CACGAG 1 cut(s) 1781
BbrPI CACGTG 1 cut(s) 851
BbsI GAAGAC 2 cut(s) 1073, 2643
Bbv12I GWGCWC 3 cut(s) 47, 679, 1901
BbvI GCAGC 8 cut(s) 336, 694, 1515, 1518, 1660, 2026, 2108, 2460
BccI CCATC 8 cut(s) 239, 314, 374, 1314, 1440, 1543, 1855, 2460
BceAI ACGGC 1 cut(s) 2196
BciT130I CCWGG 9 cut(s) 759, 913, 926, 1395, 2000, 2070, 2107, 2118, 2374
BciVI GTATCC 1 cut(s) 1294
BcnI CCSGG 1 cut(s) 2457
BcoDI GTCTC 5 cut(s) 203, 774, 2046, 2511, 2531
BfaI CTAG 7 cut(s) 242, 765, 1467, 1566, 2301, 2331, 2592
BfmI CTRYAG 2 cut(s) 1461, 2275
BfoI RGCGCY 1 cut(s) 1332
BfuAI ACCTGC 2 cut(s) 803, 874
BfuI GTATCC 1 cut(s) 1294
BglI GCCNNNNNGGC 1 cut(s) 2457
BglII AGATCT 1 cut(s) 1702
BlnI CCTAGG 1 cut(s) 2300
BlpI GCTNAGC 1 cut(s) 1900
Bme18I GGWCC 1 cut(s) 36
BmeRI GACNNNNNGTC 1 cut(s) 1230
BmeT110I CYCGRG 4 cut(s) 40, 1073, 1550, 1921
BmgBI CACGTC 1 cut(s) 1102
BmgT120I GGNCC 7 cut(s) 36, 69, 802, 909, 2296, 2297, 2483
BmiI GGNNCC 8 cut(s) 6, 37, 1242, 1428, 1579, 2297, 2298, 2355
BmrI ACTGGG 3 cut(s) 1782, 2145, 2433
BmsI GCATC 9 cut(s) 200, 575, 975, 1286, 1603, 2014, 2087, 2119, 2148
BmuI ACTGGG 3 cut(s) 1782, 2145, 2433
BoxI GACNNNNGTC 1 cut(s) 1005
BpiI GAAGAC 2 cut(s) 1073, 2643
BpmI CTGGAG 3 cut(s) 102, 966, 1233
Bpu10I CCTNAGC 1 cut(s) 1647
Bpu1102I GCTNAGC 1 cut(s) 1900
BpuEI CTTGAG 3 cut(s) 348, 1321, 2555
BpuMI CCSGG 1 cut(s) 2457
Bsa29I ATCGAT 1 cut(s) 1602
BsaAI YACGTR 2 cut(s) 851, 2338
BsaBI GATNNNNATC 2 cut(s) 1305, 1431
BsaI GGTCTC 1 cut(s) 774
BsaWI WCCGGW 1 cut(s) 1764
BsaXI ACNNNNNCTCC 6 cut(s) 502, 532, 730, 760, 1206, 1236
Bse1I ACTGG 6 cut(s) 996, 1777, 1829, 1935, 2151, 2428
Bse3DI GCAATG 4 cut(s) 213, 1299, 1793, 2194
Bse8I GATNNNNATC 2 cut(s) 1305, 1431
BseBI CCWGG 9 cut(s) 759, 913, 926, 1395, 2000, 2070, 2107, 2118, 2374
BseCI ATCGAT 1 cut(s) 1602
BseGI GGATG 9 cut(s) 215, 385, 566, 740, 1164, 2101, 2139, 2311, 2452
BseJI GATNNNNATC 2 cut(s) 1305, 1431
BseMI GCAATG 4 cut(s) 213, 1299, 1793, 2194
BseMII CTCAG 7 cut(s) 39, 1485, 1661, 1914, 1940, 1957, 2568
BseNI ACTGG 6 cut(s) 996, 1777, 1829, 1935, 2151, 2428
BseRI GAGGAG 1 cut(s) 1762
BseSI GKGCMC 2 cut(s) 679, 2300
BseX3I CGGCCG 1 cut(s) 2458
BseXI GCAGC 8 cut(s) 336, 694, 1515, 1518, 1660, 2026, 2108, 2460
BsgI GTGCAG 2 cut(s) 831, 2164
Bsh1236I CGCG 1 cut(s) 10
Bsh1285I CGRYCG 2 cut(s) 51, 2461
BshVI ATCGAT 1 cut(s) 1602
BsiEI CGRYCG 2 cut(s) 51, 2461
BsiHKAI GWGCWC 3 cut(s) 47, 679, 1901
BsiHKCI CYCGRG 4 cut(s) 40, 1073, 1550, 1921
BsiSI CCGG 3 cut(s) 1765, 2457, 2693
BslFI GGGAC 3 cut(s) 49, 87, 652
BsmAI GTCTC 5 cut(s) 203, 774, 2046, 2511, 2531
BsmBI CGTCTC 1 cut(s) 203
BsmFI GGGAC 3 cut(s) 49, 87, 652
Bso31I GGTCTC 1 cut(s) 774
BsoBI CYCGRG 4 cut(s) 40, 1073, 1550, 1921
Bsp120I GGGCCC 1 cut(s) 2296
Bsp1286I GDGCHC 4 cut(s) 47, 679, 1901, 2300
Bsp1720I GCTNAGC 1 cut(s) 1900
BspCNI CTCAG 7 cut(s) 38, 1486, 1660, 1913, 1941, 1956, 2569
BspDI ATCGAT 1 cut(s) 1602
BspFNI CGCG 1 cut(s) 10
BspHI TCATGA 1 cut(s) 1692
BspLI GGNNCC 8 cut(s) 6, 37, 1242, 1428, 1579, 2297, 2298, 2355
BspMI ACCTGC 2 cut(s) 803, 874
BspTNI GGTCTC 1 cut(s) 774
BsrBI CCGCTC 1 cut(s) 751
BsrDI GCAATG 4 cut(s) 213, 1299, 1793, 2194
BsrI ACTGG 6 cut(s) 996, 1777, 1829, 1935, 2151, 2428
BssSI CACGAG 1 cut(s) 1781
BssT1I CCWWGG 4 cut(s) 670, 805, 2047, 2300
Bst2BI CACGAG 1 cut(s) 1781
Bst2UI CCWGG 9 cut(s) 759, 913, 926, 1395, 2000, 2070, 2107, 2118, 2374
Bst4CI ACNGT 7 cut(s) 734, 1154, 1194, 1222, 1446, 1978, 2203
Bst6I CTCTTC 1 cut(s) 1635
BstAPI GCANNNNNTGC 5 cut(s) 854, 2084, 2136, 2193, 2270
BstBAI YACGTR 2 cut(s) 851, 2338
BstEII GGTNACC 1 cut(s) 1388
BstENI CCTNNNNNAGG 1 cut(s) 870
BstF5I GGATG 9 cut(s) 215, 385, 566, 740, 1164, 2101, 2139, 2311, 2452
BstFNI CGCG 1 cut(s) 10
BstH2I RGCGCY 1 cut(s) 1332
BstHHI GCGC 3 cut(s) 12, 1331, 1795
BstMAI GTCTC 5 cut(s) 203, 774, 2046, 2511, 2531
BstMCI CGRYCG 2 cut(s) 51, 2461
BstNI CCWGG 9 cut(s) 759, 913, 926, 1395, 2000, 2070, 2107, 2118, 2374
BstNSI RCATGY 9 cut(s) 506, 546, 1041, 1528, 1863, 2187, 2291, 2351, 2609
BstPAI GACNNNNGTC 1 cut(s) 1005
BstPI GGTNACC 1 cut(s) 1388
BstSFI CTRYAG 2 cut(s) 1461, 2275
BstSLI GKGCMC 2 cut(s) 679, 2300
BstUI CGCG 1 cut(s) 10
BstV1I GCAGC 8 cut(s) 336, 694, 1515, 1518, 1660, 2026, 2108, 2460
BstV2I GAAGAC 2 cut(s) 1073, 2643
BstX2I RGATCY 4 cut(s) 1240, 1426, 1702, 2353
BstXI CCANNNNNNTGG 1 cut(s) 1854
BstYI RGATCY 4 cut(s) 1240, 1426, 1702, 2353
BstZI CGGCCG 1 cut(s) 2458
Bsu15I ATCGAT 1 cut(s) 1602
BsuI GTATCC 1 cut(s) 1294
BsuTUI ATCGAT 1 cut(s) 1602
BtrI CACGTC 1 cut(s) 1102
BtsCI GGATG 9 cut(s) 215, 385, 566, 740, 1164, 2101, 2139, 2311, 2452
BtsI GCAGTG 1 cut(s) 1802
BtsIMutI CAGTG 6 cut(s) 349, 1003, 1409, 1442, 1802, 2158
BveI ACCTGC 2 cut(s) 803, 874
CaiI CAGNNNCTG 2 cut(s) 1411, 2075
CciI TCATGA 1 cut(s) 1692
CfoI GCGC 3 cut(s) 12, 1331, 1795
Cfr13I GGNCC 7 cut(s) 36, 69, 802, 909, 2296, 2297, 2483
ClaI ATCGAT 1 cut(s) 1602
CseI GACGC 3 cut(s) 185, 482, 1010
Csp6I GTAC 2 cut(s) 968, 1025
CviQI GTAC 2 cut(s) 968, 1025
DraI TTTAAA 2 cut(s) 2218, 2547
DriI GACNNNNNGTC 1 cut(s) 1230
EaeI YGGCCR 2 cut(s) 2031, 2458
EagI CGGCCG 1 cut(s) 2458
Eam1104I CTCTTC 1 cut(s) 1635
Eam1105I GACNNNNNGTC 1 cut(s) 1230
EarI CTCTTC 1 cut(s) 1635
EciI GGCGGA 1 cut(s) 898
Ecl136II GAGCTC 1 cut(s) 45
EclXI CGGCCG 1 cut(s) 2458
Eco130I CCWWGG 4 cut(s) 670, 805, 2047, 2300
Eco24I GRGCYC 2 cut(s) 47, 2300
Eco31I GGTCTC 1 cut(s) 774
Eco32I GATATC 1 cut(s) 631
Eco47I GGWCC 1 cut(s) 36
Eco52I CGGCCG 1 cut(s) 2458
Eco53kI GAGCTC 1 cut(s) 45
Eco57I CTGAAG 8 cut(s) 440, 603, 1065, 1266, 1388, 1433, 1646, 2343
Eco72I CACGTG 1 cut(s) 851
Eco88I CYCGRG 4 cut(s) 40, 1073, 1550, 1921
Eco91I GGTNACC 1 cut(s) 1388
EcoICRI GAGCTC 1 cut(s) 45
EcoNI CCTNNNNNAGG 1 cut(s) 870
EcoO109I RGGNCCY 3 cut(s) 36, 2296, 2297
EcoO65I GGTNACC 1 cut(s) 1388
EcoRI GAATTC 1 cut(s) 1958
EcoRII CCWGG 9 cut(s) 757, 911, 924, 1393, 1998, 2068, 2105, 2116, 2372
EcoRV GATATC 1 cut(s) 631
EcoT14I CCWWGG 4 cut(s) 670, 805, 2047, 2300
EcoT22I ATGCAT 3 cut(s) 215, 2132, 2293
EcoT38I GRGCYC 2 cut(s) 47, 2300
ErhI CCWWGG 4 cut(s) 670, 805, 2047, 2300
Esp3I CGTCTC 1 cut(s) 203
FalI AAGNNNNNCTT 4 cut(s) 1239, 1271, 1330, 1362
FaqI GGGAC 3 cut(s) 49, 87, 652
FauI CCCGC 2 cut(s) 26, 908
FauNDI CATATG 1 cut(s) 121
FblI GTMKAC 1 cut(s) 2319
FokI GGATG 9 cut(s) 222, 392, 553, 727, 1171, 2088, 2126, 2318, 2439
FriOI GRGCYC 2 cut(s) 47, 2300
FspBI CTAG 7 cut(s) 242, 765, 1467, 1566, 2301, 2331, 2592
GlaI GCGC 3 cut(s) 11, 1330, 1794
GsuI CTGGAG 3 cut(s) 102, 966, 1233
HaeII RGCGCY 1 cut(s) 1332
HapII CCGG 3 cut(s) 1765, 2457, 2693
HgaI GACGC 3 cut(s) 185, 482, 1010
HhaI GCGC 3 cut(s) 12, 1331, 1795
Hin6I GCGC 3 cut(s) 10, 1329, 1793
HinP1I GCGC 3 cut(s) 10, 1329, 1793
HincII GTYRAC 1 cut(s) 1770
HindII GTYRAC 1 cut(s) 1770
HindIII AAGCTT 2 cut(s) 404, 1628
HpaII CCGG 3 cut(s) 1765, 2457, 2693
HphI GGTGA 2 cut(s) 1484, 2693
Hpy166II GTNNAC 6 cut(s) 22, 677, 1664, 1770, 1857, 2320
Hpy8I GTNNAC 6 cut(s) 22, 677, 1664, 1770, 1857, 2320
Hpy99I CGWCG 1 cut(s) 2347
HpyCH4III ACNGT 7 cut(s) 734, 1154, 1194, 1222, 1446, 1978, 2203
HpyCH4IV ACGT 4 cut(s) 850, 1101, 2245, 2337
HpySE526I ACGT 4 cut(s) 850, 1101, 2245, 2337
HspAI GCGC 3 cut(s) 10, 1329, 1793
LmnI GCTCC 4 cut(s) 4, 592, 761, 2002
Lsp1109I GCAGC 8 cut(s) 336, 694, 1515, 1518, 1660, 2026, 2108, 2460
LweI GCATC 9 cut(s) 200, 575, 975, 1286, 1603, 2014, 2087, 2119, 2148
MaeI CTAG 7 cut(s) 242, 765, 1467, 1566, 2301, 2331, 2592
MaeII ACGT 4 cut(s) 850, 1101, 2245, 2337
MaeIII GTNAC 5 cut(s) 998, 1177, 1222, 1388, 1407
MbiI CCGCTC 1 cut(s) 751
MfeI CAATTG 3 cut(s) 374, 834, 963
MflI RGATCY 4 cut(s) 1240, 1426, 1702, 2353
MhlI GDGCHC 4 cut(s) 47, 679, 1901, 2300
MlsI TGGCCA 1 cut(s) 2033
MluNI TGGCCA 1 cut(s) 2033
MlyI GAGTC 1 cut(s) 632
MmeI TCCRAC 1 cut(s) 149
Mox20I TGGCCA 1 cut(s) 2033
Mph1103I ATGCAT 3 cut(s) 215, 2132, 2293
MroXI GAANNNNTTC 1 cut(s) 1938
MscI TGGCCA 1 cut(s) 2033
MseI TTAA 5 cut(s) 302, 558, 2205, 2217, 2546
MslI CAYNNNNRTG 6 cut(s) 17, 849, 1338, 1437, 1691, 1852
Msp20I TGGCCA 1 cut(s) 2033
MspA1I CMGCKG 1 cut(s) 1673
MspI CCGG 3 cut(s) 1765, 2457, 2693
MunI CAATTG 3 cut(s) 374, 834, 963
MvaI CCWGG 9 cut(s) 759, 913, 926, 1395, 2000, 2070, 2107, 2118, 2374
MvnI CGCG 1 cut(s) 10
NciI CCSGG 1 cut(s) 2457
NdeI CATATG 1 cut(s) 121
NlaIV GGNNCC 8 cut(s) 6, 37, 1242, 1428, 1579, 2297, 2298, 2355
NmeAIII GCCGAG 1 cut(s) 2486
NmuCI GTSAC 3 cut(s) 998, 1222, 1407
NsiI ATGCAT 3 cut(s) 215, 2132, 2293
NspI RCATGY 9 cut(s) 506, 546, 1041, 1528, 1863, 2187, 2291, 2351, 2609
OliI CACNNNNGTG 3 cut(s) 17, 849, 1338
PaeI GCATGC 2 cut(s) 1528, 2291
PaeR7I CTCGAG 1 cut(s) 40
PagI TCATGA 1 cut(s) 1692
PaqCI CACCTGC 1 cut(s) 874
PciI ACATGT 3 cut(s) 542, 1859, 2605
PcsI WCGNNNNNNNCGW 1 cut(s) 1015
PdmI GAANNNNTTC 1 cut(s) 1938
PfeI GAWTC 9 cut(s) 87, 161, 886, 950, 1093, 2009, 2387, 2393, 2653
PflMI CCANNNNNTGG 1 cut(s) 111
PfoI TCCNGGA 1 cut(s) 2068
Ple19I CGATCG 1 cut(s) 51
PleI GAGTC 1 cut(s) 632
PmaCI CACGTG 1 cut(s) 851
PmlI CACGTG 1 cut(s) 851
PpsI GAGTC 1 cut(s) 632
Ppu21I YACGTR 2 cut(s) 851, 2338
PpuMI RGGWCCY 1 cut(s) 36
PscI ACATGT 3 cut(s) 542, 1859, 2605
PshAI GACNNNNGTC 1 cut(s) 1005
Psp124BI GAGCTC 1 cut(s) 47
Psp5II RGGWCCY 1 cut(s) 36
Psp6I CCWGG 9 cut(s) 757, 911, 924, 1393, 1998, 2068, 2105, 2116, 2372
PspCI CACGTG 1 cut(s) 851
PspEI GGTNACC 1 cut(s) 1388
PspGI CCWGG 9 cut(s) 757, 911, 924, 1393, 1998, 2068, 2105, 2116, 2372
PspN4I GGNNCC 8 cut(s) 6, 37, 1242, 1428, 1579, 2297, 2298, 2355
PspOMI GGGCCC 1 cut(s) 2296
PspPI GGNCC 7 cut(s) 36, 69, 802, 909, 2296, 2297, 2483
PspPPI RGGWCCY 1 cut(s) 36
PspXI VCTCGAGB 1 cut(s) 40
PstNI CAGNNNCTG 2 cut(s) 1411, 2075
PsuI RGATCY 4 cut(s) 1240, 1426, 1702, 2353
PvuI CGATCG 1 cut(s) 51
PvuII CAGCTG 1 cut(s) 1673
RsaI GTAC 2 cut(s) 969, 1026
RsaNI GTAC 2 cut(s) 968, 1025
RseI CAYNNNNRTG 6 cut(s) 17, 849, 1338, 1437, 1691, 1852
SacI GAGCTC 1 cut(s) 47
SaqAI TTAA 5 cut(s) 302, 558, 2205, 2217, 2546
Sau96I GGNCC 7 cut(s) 36, 69, 802, 909, 2296, 2297, 2483
SchI GAGTC 1 cut(s) 632
SduI GDGCHC 4 cut(s) 47, 679, 1901, 2300
SfaNI GCATC 9 cut(s) 200, 575, 975, 1286, 1603, 2014, 2087, 2119, 2148
SfcI CTRYAG 2 cut(s) 1461, 2275
Sfr274I CTCGAG 1 cut(s) 40
SinI GGWCC 1 cut(s) 36
SlaI CTCGAG 1 cut(s) 40
SmiMI CAYNNNNRTG 6 cut(s) 17, 849, 1338, 1437, 1691, 1852
SmlI CTYRAG 4 cut(s) 40, 363, 1336, 2534
SmoI CTYRAG 4 cut(s) 40, 363, 1336, 2534
SphI GCATGC 2 cut(s) 1528, 2291
SspI AATATT 2 cut(s) 1573, 2436
SspMI CTAG 7 cut(s) 242, 765, 1467, 1566, 2301, 2331, 2592
SstI GAGCTC 1 cut(s) 47
StyI CCWWGG 4 cut(s) 670, 805, 2047, 2300
TaaI ACNGT 7 cut(s) 734, 1154, 1194, 1222, 1446, 1978, 2203
TaiI ACGT 4 cut(s) 853, 1104, 2248, 2340
TaqI TCGA 5 cut(s) 41, 47, 51, 1009, 1602
TauI GCSGC 3 cut(s) 10, 2063, 2614
TfiI GAWTC 9 cut(s) 87, 161, 886, 950, 1093, 2009, 2387, 2393, 2653
Tru1I TTAA 5 cut(s) 302, 558, 2205, 2217, 2546
Tru9I TTAA 5 cut(s) 302, 558, 2205, 2217, 2546
TscAI CASTG 6 cut(s) 349, 1003, 1416, 1449, 1802, 2158
TseFI GTSAC 3 cut(s) 998, 1222, 1407
TseI GCWGC 8 cut(s) 349, 707, 1528, 1531, 1673, 2039, 2121, 2473
Tsp45I GTSAC 3 cut(s) 998, 1222, 1407
TspDTI ATGAA 8 cut(s) 324, 512, 735, 1737, 1747, 1926, 2022, 2322
TspGWI ACGGA 1 cut(s) 1105
TspRI CASTG 6 cut(s) 349, 1003, 1416, 1449, 1802, 2158
Van91I CCANNNNNTGG 1 cut(s) 111
VneI GTGCAC 1 cut(s) 675
VpaK11BI GGWCC 1 cut(s) 36
XagI CCTNNNNNAGG 1 cut(s) 870
XapI RAATTY 6 cut(s) 655, 826, 955, 1282, 1709, 1958
XbaI TCTAGA 1 cut(s) 241
XceI RCATGY 9 cut(s) 506, 546, 1041, 1528, 1863, 2187, 2291, 2351, 2609
XcmI CCANNNNNNNNNTGG 1 cut(s) 2150
XhoI CTCGAG 1 cut(s) 40
XmaJI CCTAGG 1 cut(s) 2300
XmiI GTMKAC 1 cut(s) 2319
XmnI GAANNNNTTC 1 cut(s) 1938
XspI CTAG 7 cut(s) 242, 765, 1467, 1566, 2301, 2331, 2592
Zsp2I ATGCAT 3 cut(s) 215, 2132, 2293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.