Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007604

Physical Location & Seq

Genomic Coordinates Reverse (-)

15863339 .. 15868650

Gene Structure 5312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGGGAGGAGGAAGCAATAATAGTCACAATATGGACAACGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTACAATGACTGTCCTAAACCGAGCTCTATGCGCCGCCAACAGCTAATCCGCGAATGTCCTATCCTCTCCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAAAAACAGCGAAAAGAGGCGTCACGACTTCAAGCTGTGAATAGGAAGCTAACGGCAATGAACAAGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCACTTGGTTTATGAGAACAGCTATTTTCGCCAACATCCTCAAAACCAGGGGAATTTGGCTACCACAGATACTAGCTGTGAGTCAGTGGTGACGAGTGGTCAACACCACTTGACCCCTCAACATCAGCCTCGTGATGCTAGTCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCCAAGGCGACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATAGGAATCGTTGCTATTTCTCATGGATGCACGGGAATCGCTGCTCGTGCTTGCGGCCTTGTGGGTCTTGATCCCACAAGGGTCGCGGAGATCCTAAAGGATAAGCCTTGTTGGTTGCGTGATTGCAGATCTCTGGATATAGTTAACGTACTATCCACTGCAAATGGTGGAACCCTTGAACTAATCTACATGCAGCTTTATGCGCCGACAACACTGGCACCAGCTCGTGACTTCTGGATGCTACGTTACACATCTGTAATGGAAGACGGGAGCCTTGTGATATGCGAACGATCACTGAACAATACACAAAACGGGCCAAGTATGCCTCCGTCTCCTCATTTCGTTAGGGCAGAGATTTTACCAAGTGGTTACCTCATTAGACCTTGCGAAGGAGGTGGATCCATTCTTCACATTGTCGATCATTTCGATCTTGAGCCATGGAGTGTGCCAGAAGTTCTTCGTTCTCTCTATGAGTCCTCCACTTTACTCGCCCAAAGAACTACAATGGCCGCTCTGCGCTATTTGAGGCAAATATCTCAAGAGATTTCACAACCTAACGTAACAGGTTGGGGAAGAAGACCAGCGGCTCTTAGAGCACTTAGCCAAAGGCTTAGCAAAGGATTCAACGAAGCAGTGAATGGGTTCAGCGATGAAGGATGGTCCATCCTAGAGAGTGATGGTATCGATGATGTCACTCTTCTTGTGAACTCCTCTCCCACAAAGATGATGATGACTTCAAGTCTCCCATTTGCCAATGGCTACACTTCTATGCCTAGCGCGGTCTTATGTGCCAAAGCTTCCATGTTATTACAAAATGTTCCACCTTCGATTCTGCTGCGGTTCTTGAGGGAACATAGACAAGAATGGGCAGACAATAGCATCGATGCATATTCGGCCGCAGCCATCAAAGCAGGCCCTTGTAGCTTACCAATCCCTCGCCCAGGGAGCTTTGGTGGTCAAGTCATTCTTCCTCTAGCTCACACTATAGAGAATGAAGAGTTTATGGAAGTCATTAAGCTTGAGAGCTTGGGGCACTACCAAGAAGACATGATGATGCCTGCTGATATCTTCCTTCTGCAAATGTGCAGTGGGGTGGATGAGAACGCAGTTGAATCATGCGCAGAGCTTATATTTGCACCAATCGACGCATCTTTCTCTGATGATGCACCAATCATTCCTTCCGGTTTCCGCATCATTCCTCTAGATTCCAAATCAGAGGGGTTGAGTCCTAACCGAACGCTAGACCTAGCGTCGGCTCTAGACGTAGGGAGCAGAACAGCCGGAGATTCATGTGGAAGCAGAGGAAACTCAAAGTCCGTTATGACTATAGCGTTTCAGCTAGCTTTTGAGATGCATATGCAAGAGAATGTAGCCTCAATGGCTAGACAGTATGTAAGAAGTGTGATCGCGTCGGTTCAACGGGTCGCACTTGCTCTCTCTCCTTCTTCTCATCAGCTAAGTGGCTTGCGTCCTCCACCCGCGTCACCCGAAGCTCACACTCTCGCTCGCTGGATCTCTCACTCTTATAGATGTTACCTTGGCGTTGATCTTCTCAAACCTCATGGAACTGATCTTCTCAAGTCTCTTTGGCACCATCCTGACGCTGTCATGTGTTGCTCACTCAAGGCCTTATCTCCGGTATTCACATTTGCGAACCAAGCTGGTTTAGACATGCTGGAGACGACGTTGGTGGCACTTCAAGATATCACTCTCGACAAGATCTTCGACAACAACAACGGGAAGAAGACTTTATCCTCCGAATTCCCTCAGATCATGCAACAGGGGTTTATGTGTATGGATGGAGGAATATGCATGTCGAGCATGGGAAGAGCAGTAACGTACGAGAAGGCTGTTGGGTGGAAAGTGTTGAACGACGACGAAGATCCTCATTGTATCTGCTTCATGTTCCTCAACTGGTCTTTTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009933 GO:0010014 GO:0010016 GO:0010033 GO:0010065 GO:0010067 GO:0010072 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045595 GO:0045597 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048518 GO:0048522 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090421 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

833

Amino Acids

92.0

Weight (kDa)

5.87

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	15 - 73	1.2e-15	Homeodomain
START	PF01852	160 - 368	5.6e-58	START domain
MEKHLA	PF08670	691 - 832	4.1e-43	MEKHLA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32880
fragaria_vesca	FvH4_2g35360 FvH4_2g35360 FvH4_2g35360 FvH4_2g35360
malus_domestica	MD08G1112900.v1.1 MD15G1092200.v1.1
prunus_persica	Prupe.1G447100_v2.0.a1 Prupe.1G447100_v2.0.a1
pyrus_communis	pycom08g09360 pycom110g00010 pycom15g08570
rosa_chinensis	RchiOBHm_Chr6g0306551
rosa_laevigata	RLG00000010786
rosa_multiflora	Rmu_sc0002971.1_g000003 Rmu_sc0002971.1_g000004
rosa_roxburghii	Rroxscaffold_7G00161680
rosa_rugosa	Rorug06G0350500 Rorug06G0350500
rosa_samantha	Rh6AG462700 Rh6BG438100 Rh6CG476800 Rh6DG463500
rosa_wichuraiana	Rw6G040320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	192
Acc16I	TGCGCA	1 cut(s)	1693
Acc36I	ACCTGC	1 cut(s)	192
AccB1I	GGYRCC	2 cut(s)	790, 2163
AccBSI	CCGCTC	1 cut(s)	1085
AccII	CGCG	5 cut(s)	141, 659, 1352, 1982, 2054
AccIII	TCCGGA	1 cut(s)	565
AclWI	GGATC	6 cut(s)	638, 658, 966, 979, 2093, 2450
AcoI	YGGCCR	2 cut(s)	1080, 1467
AcsI	RAATTY	2 cut(s)	370, 2333
AcyI	GRCGYC	1 cut(s)	230
AfaI	GTAC	4 cut(s)	47, 56, 723, 2414
AfiI	CCNNNNNNNGG	3 cut(s)	962, 1514, 1825
AgsI	TTSAA	8 cut(s)	242, 752, 1198, 1311, 1685, 1991, 2273, 2443
AhdI	GACNNNNNGTC	3 cut(s)	414, 1311, 1822
AjnI	CCWGG	4 cut(s)	363, 547, 559, 1513
AjuI	GAANNNNNNNTTGG	2 cut(s)	1735, 1767
Alw21I	GWGCWC	2 cut(s)	116, 1171
Alw26I	GTCTC	6 cut(s)	79, 321, 909, 1319, 2160, 2246
AlwI	GGATC	6 cut(s)	638, 658, 966, 979, 2093, 2450
Aor13HI	TCCGGA	1 cut(s)	565
AoxI	GGCC	6 cut(s)	628, 887, 1080, 1467, 1486, 2199
ApeKI	GCWGC	4 cut(s)	614, 766, 1408, 1472
ApoI	RAATTY	2 cut(s)	370, 2333
ArsI	GACNNNNNNTTYG	2 cut(s)	2279, 2311
Asp700I	GAANNNNTTC	2 cut(s)	1029, 1214
AspLEI	GCGC	5 cut(s)	123, 778, 1092, 1352, 1694
AspS9I	GGNCC	5 cut(s)	538, 563, 887, 1233, 1487
AsuHPI	GGTGA	2 cut(s)	418, 2049
AsuNHI	GCTAGC	1 cut(s)	1912
AvaII	GGWCC	3 cut(s)	538, 563, 1233
BaeGI	GKGCMC	1 cut(s)	1608
BamHI	GGATCC	1 cut(s)	971
BanI	GGYRCC	2 cut(s)	790, 2163
BanII	GRGCYC	1 cut(s)	116
BauI	CACGAG	3 cut(s)	447, 618, 798
BbsI	GAAGAC	4 cut(s)	843, 1156, 1623, 2324
Bbv12I	GWGCWC	2 cut(s)	116, 1171
BbvI	GCAGC	4 cut(s)	601, 778, 1395, 1484
BccI	CCATC	7 cut(s)	277, 1224, 1244, 1244, 1484, 2175, 2366
BceAI	ACGGC	1 cut(s)	279
BcgI	CGANNNNNNTGC	6 cut(s)	100, 134, 592, 626, 1390, 1424
BciT130I	CCWGG	4 cut(s)	365, 549, 561, 1515
BcoDI	GTCTC	6 cut(s)	79, 321, 909, 1319, 2160, 2246
BfmI	CTRYAG	2 cut(s)	1557, 1899
BfuAI	ACCTGC	1 cut(s)	192
BglI	GCCNNNNNGGC	1 cut(s)	1952
BglII	AGATCT	2 cut(s)	701, 2292
BisI	GCNGC	9 cut(s)	124, 615, 628, 767, 1083, 1158, 1409, 1470, 1473
BlpI	GCTNAGC	1 cut(s)	1184
BlsI	GCNGC	9 cut(s)	125, 616, 629, 768, 1084, 1159, 1410, 1471, 1474
Bme1390I	CCNGG	4 cut(s)	365, 549, 561, 1515
Bme18I	GGWCC	3 cut(s)	538, 563, 1233
BmeRI	GACNNNNNGTC	3 cut(s)	414, 1311, 1822
BmgT120I	GGNCC	5 cut(s)	538, 563, 887, 1233, 1487
BmiI	GGNNCC	8 cut(s)	191, 523, 539, 745, 792, 845, 973, 2165
BmrFI	CCNGG	4 cut(s)	365, 549, 561, 1515
BmtI	GCTAGC	1 cut(s)	1916
BpiI	GAAGAC	4 cut(s)	843, 1156, 1623, 2324
BplI	GAGNNNNNCTC	2 cut(s)	43, 75
BpmI	CTGGAG	2 cut(s)	101, 2270
Bpu1102I	GCTNAGC	1 cut(s)	1184
BpuEI	CTTGAG	6 cut(s)	1025, 1095, 1438, 1613, 2135, 2180
Bsa29I	ATCGAT	2 cut(s)	1257, 1455
BsaAI	YACGTR	1 cut(s)	49
BsaHI	GRCGYC	1 cut(s)	230
BsaJI	CCNNGG	7 cut(s)	364, 510, 548, 1010, 1513, 1514, 2110
BsaWI	WCCGGW	3 cut(s)	565, 1754, 2209
BsaXI	ACNNNNNCTCC	4 cut(s)	1510, 1540, 2243, 2273
Bsc4I	CCNNNNNNNGG	3 cut(s)	962, 1514, 1825
Bse1I	ACTGG	3 cut(s)	523, 792, 2492
Bse3DI	GCAATG	2 cut(s)	273, 477
BseAI	TCCGGA	1 cut(s)	565
BseBI	CCWGG	4 cut(s)	365, 549, 561, 1515
BseCI	ATCGAT	2 cut(s)	1257, 1455
BseDI	CCNNGG	7 cut(s)	364, 510, 548, 1010, 1513, 1514, 2110
BseLI	CCNNNNNNNGG	3 cut(s)	962, 1514, 1825
BseMI	GCAATG	2 cut(s)	273, 477
BseMII	CTCAG	1 cut(s)	2354
BseNI	ACTGG	3 cut(s)	523, 792, 2492
BseRI	GAGGAG	3 cut(s)	21, 897, 1273
BseSI	GKGCMC	1 cut(s)	1608
BseX3I	CGGCCG	1 cut(s)	1467
BseXI	GCAGC	4 cut(s)	601, 778, 1395, 1484
BsgI	GTGCAG	1 cut(s)	1678
Bsh1236I	CGCG	5 cut(s)	141, 659, 1352, 1982, 2054
Bsh1285I	CGRYCG	1 cut(s)	1470
BshFI	GGCC	6 cut(s)	630, 889, 1082, 1469, 1488, 2201
BshNI	GGYRCC	2 cut(s)	790, 2163
BshVI	ATCGAT	2 cut(s)	1257, 1455
BsiEI	CGRYCG	1 cut(s)	1470
BsiHKAI	GWGCWC	2 cut(s)	116, 1171
BsiSI	CCGG	4 cut(s)	566, 1755, 1854, 2210
BsiWI	CGTACG	1 cut(s)	2412
BslI	CCNNNNNNNGG	3 cut(s)	962, 1514, 1825
BsmAI	GTCTC	6 cut(s)	79, 321, 909, 1319, 2160, 2246
BsmBI	CGTCTC	2 cut(s)	909, 2246
BsnI	GGCC	6 cut(s)	630, 889, 1082, 1469, 1488, 2201
Bsp1286I	GDGCHC	3 cut(s)	116, 1171, 1608
Bsp13I	TCCGGA	1 cut(s)	565
Bsp1720I	GCTNAGC	1 cut(s)	1184
Bsp19I	CCATGG	1 cut(s)	1010
BspANI	GGCC	6 cut(s)	630, 889, 1082, 1469, 1488, 2201
BspCNI	CTCAG	1 cut(s)	2353
BspDI	ATCGAT	2 cut(s)	1257, 1455
BspEI	TCCGGA	1 cut(s)	565
BspFNI	CGCG	5 cut(s)	141, 659, 1352, 1982, 2054
BspLI	GGNNCC	8 cut(s)	191, 523, 539, 745, 792, 845, 973, 2165
BspMI	ACCTGC	1 cut(s)	192
BspOI	GCTAGC	1 cut(s)	1916
BspPI	GGATC	6 cut(s)	638, 658, 966, 979, 2093, 2450
BspQI	GCTCTTC	1 cut(s)	2395
BspT107I	GGYRCC	2 cut(s)	790, 2163
BsrBI	CCGCTC	1 cut(s)	1085
BsrDI	GCAATG	2 cut(s)	273, 477
BsrI	ACTGG	3 cut(s)	523, 792, 2492
BssECI	CCNNGG	7 cut(s)	364, 510, 548, 1010, 1513, 1514, 2110
BssNI	GRCGYC	1 cut(s)	230
BssSI	CACGAG	3 cut(s)	447, 618, 798
BssT1I	CCWWGG	3 cut(s)	510, 1010, 2110
Bst2BI	CACGAG	3 cut(s)	447, 618, 798
Bst2UI	CCWGG	4 cut(s)	365, 549, 561, 1515
Bst4CI	ACNGT	2 cut(s)	101, 1962
Bst6I	CTCTTC	4 cut(s)	282, 1275, 1563, 2395
BstACI	GRCGYC	1 cut(s)	230
BstBAI	YACGTR	1 cut(s)	49
BstC8I	GCNNGC	7 cut(s)	302, 625, 1486, 1632, 1914, 2039, 2080
BstDEI	CTNAG	5 cut(s)	1163, 1172, 1184, 2030, 2340
BstDSI	CCRYGG	1 cut(s)	1010
BstEII	GGTNACC	1 cut(s)	941
BstENI	CCTNNNNNAGG	2 cut(s)	960, 1512
BstFNI	CGCG	5 cut(s)	141, 659, 1352, 1982, 2054
BstHHI	GCGC	5 cut(s)	123, 778, 1092, 1352, 1694
BstMAI	GTCTC	6 cut(s)	79, 321, 909, 1319, 2160, 2246
BstMCI	CGRYCG	1 cut(s)	1470
BstNI	CCWGG	4 cut(s)	365, 549, 561, 1515
BstNSI	RCATGY	3 cut(s)	766, 2248, 2389
BstPI	GGTNACC	1 cut(s)	941
BstSCI	CCNGG	4 cut(s)	363, 547, 559, 1513
BstSFI	CTRYAG	2 cut(s)	1557, 1899
BstSLI	GKGCMC	1 cut(s)	1608
BstUI	CGCG	5 cut(s)	141, 659, 1352, 1982, 2054
BstV1I	GCAGC	4 cut(s)	601, 778, 1395, 1484
BstV2I	GAAGAC	4 cut(s)	843, 1156, 1623, 2324
BstX2I	RGATCY	6 cut(s)	663, 701, 971, 2085, 2292, 2455
BstXI	CCANNNNNNTGG	1 cut(s)	548
BstYI	RGATCY	6 cut(s)	663, 701, 971, 2085, 2292, 2455
BstZI	CGGCCG	1 cut(s)	1467
Bsu15I	ATCGAT	2 cut(s)	1257, 1455
BsuRI	GGCC	6 cut(s)	630, 889, 1082, 1469, 1488, 2201
BsuTUI	ATCGAT	2 cut(s)	1257, 1455
BtgI	CCRYGG	1 cut(s)	1010
BtgZI	GCGATG	1 cut(s)	1236
BtsI	GCAGTG	3 cut(s)	729, 1212, 1666
BtsIMutI	CAGTG	6 cut(s)	408, 729, 785, 866, 1212, 1666
BveI	ACCTGC	1 cut(s)	192
Cac8I	GCNNGC	7 cut(s)	302, 625, 1486, 1632, 1914, 2039, 2080
CfoI	GCGC	5 cut(s)	123, 778, 1092, 1352, 1694
Cfr13I	GGNCC	5 cut(s)	538, 563, 887, 1233, 1487
ClaI	ATCGAT	2 cut(s)	1257, 1455
CseI	GACGC	7 cut(s)	219, 1727, 1812, 1971, 2030, 2043, 2183
Csp6I	GTAC	4 cut(s)	46, 55, 722, 2413
CviQI	GTAC	4 cut(s)	46, 55, 722, 2413
DdeI	CTNAG	5 cut(s)	1163, 1172, 1184, 2030, 2340
DriI	GACNNNNNGTC	3 cut(s)	414, 1311, 1822
EaeI	YGGCCR	2 cut(s)	1080, 1467
EagI	CGGCCG	1 cut(s)	1467
Eam1104I	CTCTTC	4 cut(s)	282, 1275, 1563, 2395
Eam1105I	GACNNNNNGTC	3 cut(s)	414, 1311, 1822
EarI	CTCTTC	4 cut(s)	282, 1275, 1563, 2395
Ecl136II	GAGCTC	1 cut(s)	114
EclXI	CGGCCG	1 cut(s)	1467
Eco130I	CCWWGG	3 cut(s)	510, 1010, 2110
Eco147I	AGGCCT	1 cut(s)	2201
Eco24I	GRGCYC	1 cut(s)	116
Eco32I	GATATC	2 cut(s)	1639, 2278
Eco47I	GGWCC	3 cut(s)	538, 563, 1233
Eco52I	CGGCCG	1 cut(s)	1467
Eco53kI	GAGCTC	1 cut(s)	114
Eco91I	GGTNACC	1 cut(s)	941
EcoICRI	GAGCTC	1 cut(s)	114
EcoNI	CCTNNNNNAGG	2 cut(s)	960, 1512
EcoO109I	RGGNCCY	1 cut(s)	1487
EcoO65I	GGTNACC	1 cut(s)	941
EcoRI	GAATTC	1 cut(s)	2333
EcoRII	CCWGG	4 cut(s)	363, 547, 559, 1513
EcoRV	GATATC	2 cut(s)	1639, 2278
EcoT14I	CCWWGG	3 cut(s)	510, 1010, 2110
EcoT22I	ATGCAT	3 cut(s)	1462, 1929, 2387
EcoT38I	GRGCYC	1 cut(s)	116
ErhI	CCWWGG	3 cut(s)	510, 1010, 2110
Esp3I	CGTCTC	2 cut(s)	909, 2246
FalI	AAGNNNNNCTT	2 cut(s)	1524, 1556
FauI	CCCGC	1 cut(s)	2059
FauNDI	CATATG	1 cut(s)	1929
Fnu4HI	GCNGC	9 cut(s)	124, 615, 628, 767, 1083, 1158, 1409, 1470, 1473
FriOI	GRGCYC	1 cut(s)	116
Fsp4HI	GCNGC	9 cut(s)	124, 615, 628, 767, 1083, 1158, 1409, 1470, 1473
FspI	TGCGCA	1 cut(s)	1693
GlaI	GCGC	5 cut(s)	122, 777, 1091, 1351, 1693
GluI	GCNGC	9 cut(s)	124, 615, 628, 767, 1083, 1158, 1409, 1470, 1473
GsuI	CTGGAG	2 cut(s)	101, 2270
HaeIII	GGCC	6 cut(s)	630, 889, 1082, 1469, 1488, 2201
HapII	CCGG	4 cut(s)	566, 1755, 1854, 2210
HgaI	GACGC	7 cut(s)	219, 1727, 1812, 1971, 2030, 2043, 2183
HhaI	GCGC	5 cut(s)	123, 778, 1092, 1352, 1694
Hin1I	GRCGYC	1 cut(s)	230
Hin6I	GCGC	5 cut(s)	121, 776, 1090, 1350, 1692
HinP1I	GCGC	5 cut(s)	121, 776, 1090, 1350, 1692
HincII	GTYRAC	2 cut(s)	419, 718
HindII	GTYRAC	2 cut(s)	419, 718
HindIII	AAGCTT	3 cut(s)	275, 1368, 1589
HpaI	GTTAAC	1 cut(s)	718
HpaII	CCGG	4 cut(s)	566, 1755, 1854, 2210
HphI	GGTGA	2 cut(s)	418, 2049
Hpy166II	GTNNAC	4 cut(s)	57, 419, 718, 1279
Hpy188I	TCNGA	4 cut(s)	1732, 1789, 2332, 2343
Hpy8I	GTNNAC	4 cut(s)	57, 419, 718, 1279
Hpy99I	CGWCG	6 cut(s)	1721, 1828, 1987, 2260, 2450, 2453
HpyAV	CCTTC	7 cut(s)	956, 1220, 1407, 1655, 1761, 2025, 2413
HpyCH4III	ACNGT	2 cut(s)	101, 1962
HpyCH4IV	ACGT	7 cut(s)	48, 720, 817, 1131, 1836, 2258, 2411
HpyF3I	CTNAG	5 cut(s)	1163, 1172, 1184, 2030, 2340
HpySE526I	ACGT	7 cut(s)	48, 720, 817, 1131, 1836, 2258, 2411
Hsp92I	GRCGYC	1 cut(s)	230
HspAI	GCGC	5 cut(s)	121, 776, 1090, 1350, 1692
Kpn2I	TCCGGA	1 cut(s)	565
KspAI	GTTAAC	1 cut(s)	718
LguI	GCTCTTC	1 cut(s)	2395
LmnI	GCTCC	3 cut(s)	843, 1518, 1842
Lsp1109I	GCAGC	4 cut(s)	601, 778, 1395, 1484
MaeII	ACGT	7 cut(s)	48, 720, 817, 1131, 1836, 2258, 2411
MbiI	CCGCTC	1 cut(s)	1085
MflI	RGATCY	6 cut(s)	663, 701, 971, 2085, 2292, 2455
MhlI	GDGCHC	3 cut(s)	116, 1171, 1608
MluCI	AATT	2 cut(s)	370, 2333
MlyI	GAGTC	4 cut(s)	81, 407, 1055, 1807
MmeI	TCCRAC	1 cut(s)	183
Mph1103I	ATGCAT	3 cut(s)	1462, 1929, 2387
MroI	TCCGGA	1 cut(s)	565
MroXI	GAANNNNTTC	2 cut(s)	1029, 1214
MseI	TTAA	3 cut(s)	494, 717, 1587
MslI	CAYNNNNRTG	3 cut(s)	1295, 1340, 1625
MspA1I	CMGCKG	2 cut(s)	527, 1157
MspI	CCGG	4 cut(s)	566, 1755, 1854, 2210
MspR9I	CCNGG	4 cut(s)	365, 549, 561, 1515
MvaI	CCWGG	4 cut(s)	365, 549, 561, 1515
MvnI	CGCG	5 cut(s)	141, 659, 1352, 1982, 2054
NcoI	CCATGG	1 cut(s)	1010
NdeI	CATATG	1 cut(s)	1929
NheI	GCTAGC	1 cut(s)	1912
NlaIV	GGNNCC	8 cut(s)	191, 523, 539, 745, 792, 845, 973, 2165
NmuCI	GTSAC	6 cut(s)	23, 231, 406, 800, 1264, 2055
NsbI	TGCGCA	1 cut(s)	1693
NsiI	ATGCAT	3 cut(s)	1462, 1929, 2387
NspI	RCATGY	3 cut(s)	766, 2248, 2389
PaqCI	CACCTGC	1 cut(s)	192
PasI	CCCWGGG	1 cut(s)	1514
PceI	AGGCCT	1 cut(s)	2201
PciSI	GCTCTTC	1 cut(s)	2395
PcsI	WCGNNNNNNNCGW	2 cut(s)	45, 996
PdmI	GAANNNNTTC	2 cut(s)	1029, 1214
PfeI	GAWTC	8 cut(s)	569, 579, 609, 1194, 1402, 1685, 1778, 1859
Pfl23II	CGTACG	1 cut(s)	2412
PflFI	GACNNNGTC	1 cut(s)	2177
PkrI	GCNGC	9 cut(s)	125, 616, 629, 768, 1084, 1159, 1410, 1471, 1474
PleI	GAGTC	4 cut(s)	81, 406, 1054, 1806
PpsI	GAGTC	4 cut(s)	81, 406, 1054, 1806
Ppu21I	YACGTR	1 cut(s)	49
Psp124BI	GAGCTC	1 cut(s)	116
Psp6I	CCWGG	4 cut(s)	363, 547, 559, 1513
PspEI	GGTNACC	1 cut(s)	941
PspGI	CCWGG	4 cut(s)	363, 547, 559, 1513
PspLI	CGTACG	1 cut(s)	2412
PspN4I	GGNNCC	8 cut(s)	191, 523, 539, 745, 792, 845, 973, 2165
PspPI	GGNCC	5 cut(s)	538, 563, 887, 1233, 1487
PsuI	RGATCY	6 cut(s)	663, 701, 971, 2085, 2292, 2455
PsyI	GACNNNGTC	1 cut(s)	2177
RsaI	GTAC	4 cut(s)	47, 56, 723, 2414
RsaNI	GTAC	4 cut(s)	46, 55, 722, 2413
RseI	CAYNNNNRTG	3 cut(s)	1295, 1340, 1625
SacI	GAGCTC	1 cut(s)	116
SapI	GCTCTTC	1 cut(s)	2395
SaqAI	TTAA	3 cut(s)	494, 717, 1587
SatI	GCNGC	9 cut(s)	124, 615, 628, 767, 1083, 1158, 1409, 1470, 1473
Sau96I	GGNCC	5 cut(s)	538, 563, 887, 1233, 1487
SchI	GAGTC	4 cut(s)	81, 407, 1055, 1807
ScrFI	CCNGG	4 cut(s)	365, 549, 561, 1515
SduI	GDGCHC	3 cut(s)	116, 1171, 1608
SfcI	CTRYAG	2 cut(s)	1557, 1899
SinI	GGWCC	3 cut(s)	538, 563, 1233
SmiMI	CAYNNNNRTG	3 cut(s)	1295, 1340, 1625
SmlI	CTYRAG	6 cut(s)	1004, 1110, 1417, 1592, 2150, 2195
SmoI	CTYRAG	6 cut(s)	1004, 1110, 1417, 1592, 2150, 2195
Sse9I	AATT	2 cut(s)	370, 2333
SseBI	AGGCCT	1 cut(s)	2201
SstI	GAGCTC	1 cut(s)	116
StuI	AGGCCT	1 cut(s)	2201
StyD4I	CCNGG	4 cut(s)	363, 547, 559, 1513
StyI	CCWWGG	3 cut(s)	510, 1010, 2110
TaaI	ACNGT	2 cut(s)	101, 1962
TaiI	ACGT	7 cut(s)	51, 723, 820, 1134, 1839, 2261, 2414
TasI	AATT	2 cut(s)	370, 2333
TauI	GCSGC	5 cut(s)	126, 630, 1085, 1160, 1472
TfiI	GAWTC	8 cut(s)	569, 579, 609, 1194, 1402, 1685, 1778, 1859
Tru1I	TTAA	3 cut(s)	494, 717, 1587
Tru9I	TTAA	3 cut(s)	494, 717, 1587
TscAI	CASTG	6 cut(s)	408, 736, 792, 873, 1212, 1666
TseFI	GTSAC	6 cut(s)	23, 231, 406, 800, 1264, 2055
TseI	GCWGC	4 cut(s)	614, 766, 1408, 1472
Tsp45I	GTSAC	6 cut(s)	23, 231, 406, 800, 1264, 2055
TspDTI	ATGAA	8 cut(s)	284, 493, 501, 569, 1239, 1581, 1851, 2464
TspGWI	ACGGA	2 cut(s)	891, 1879
TspRI	CASTG	6 cut(s)	408, 736, 792, 873, 1212, 1666
Tth111I	GACNNNGTC	1 cut(s)	2177
VpaK11BI	GGWCC	3 cut(s)	538, 563, 1233
XagI	CCTNNNNNAGG	2 cut(s)	960, 1512
XapI	RAATTY	2 cut(s)	370, 2333
XbaI	TCTAGA	2 cut(s)	1774, 1831
XceI	RCATGY	3 cut(s)	766, 2248, 2389
XmnI	GAANNNNTTC	2 cut(s)	1029, 1214
Zsp2I	ATGCAT	3 cut(s)	1462, 1929, 2387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.