Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0007604

Physical Location & Seq

Genomic Coordinates Reverse (-)

7638197 .. 7644111

Gene Structure 5915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g09360.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGAAGATGCAGATGGACAATGGCAAGTACGTAAGGTACACGCCGGAGCAAGTGGAAGCTTTGGAGAGGTTGTACCATGAGTGCCCGAAGCCGAGCTCCATGCGCCGCCAGCAGCTCATCCGTGATTGCCCTATCCTCTCCAACATCGAGCCTAAGCAATCGATCAAAGTCTGGTTCCAAAACCGCAGATGTAGAGAGAAGCAGCGGAAGGAGGCGTCGAGGTTGCAGACCGTGAACAGAAAGCTGACGGCGATGAATAAGCTTCTGATGGAGGAGAATGATCGGTTGCAGAAGCAGGTGTCTCAGCTGGTCTACGAGAACAGCTACTTCCGCCAACAAACACAAAATGCTACTTTAGCCACGACAGACACAAGTTGTGATTCGGTGGTGACGAGCGGTCAACACCATTTGACTCCGCAGCAGCATCCACCACCACCACCAAGGGATGCGAGCCCTGCAGGACTTCTGTCCATTGCAGAGGAAACTTTAGCAGAGTTTTTATCAAAGGCCACTGGGACTGCTGTGGAGTGGGTCCAATTGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCACGGTTGCACTGGTGTGGCAGCACGTGCATGTGGCCTTGTAGGTCTAGACCCTACAAGAGTCGCTGAAATCCTCAAAGATCGGCCTTCGTGGTTCCGAAACTGCCGGTCTGTGGATGTGCTGAACGTGTTGTCCACGGGCAATGGTGGAACCATTGAACTGCTTTACATGCAGCTCTATGCACCCACAACTTTGGCACCAGCTCGAGATTTCTGGTTGCTTCGCTACACATCGGTACTCGAAGATGGTAGTCTCGTGGTCTGTGAAAGATCACTTAACAACACACAGAATGGTCCTAGCATGCCACCAGTGCAGAATTTTGTGAGAGCAGAAATGCTGCCGAGCGGGTATCTAATTAGACCTTGTGAAGGTGGTGGCTCGATCCTTCACATTGGTATCGATCATATGGATTTGGAGCCTTGGAGTGTACCCGAAGTGTTGCGCCCGCTTTATGAGTCATCAACACTTCTTGCTCAGAAGACAACGATGGCGGCATTACGCAACCTGAGGCAGATTTCTCAAGAAGTTTCTCAGCCTAATTCCGCTGGTTGGGGAAGAAGGCCTGCAGCTCTCCGTGCTCTTAGTCAGAGATTGAGCAAGGGTTTCAATGAAGCAGTTAACGGGTTTACAGATGAAGGATGGTCTGTTCTAGAAAGTGATGGTGTTGATGATGTTACCCTTCTTGTGAACTCGTCTCCGGGCAAGATGATGAGTGCAAATCTTTATACCAATGGAGTTCCATCTATGAGCACTGCAGTCTTATGTGCCAAAGCATCCATGTTACTCCAAAATGTGCCTCCAGCCATACTTCTTAGATTCTTGCGAGAACACCGATCAGAGTGGGCTGACAGAAGCATTGATGCTTATTCAGCAGCTGCTATTAAAGCTGGTCCCTGCAACATGCTAGGGCCTCGAGCTGGAAGTTTTGGGGATCAGGTTATTCTTCCCCTGGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTCATTAAGATTGAGAACATGGGCCACTATCGAGAGGATATGATGATGCCTGCAGCTGACATTTTCCTGTTGCAACTGTGTAGTGGAGTGGATGAGAATGCCGTCGGGACCTGCGCTGAACTAGTATTTGCTCCCATTGATGCATCATTTTCGGATGATGCTCCAATTCTACCTTCTGGTTTTCGCATCATCCCTCTTGATTCTCGGATGGATACTCCCAGTCCAAACCGTACGCTTGATCTTGCCTCAGCTCTTGAAGTTGGACCTGCTGGAAGCAGAGCATCTGGTGATAATGCTGGCCACTCCGGCAATACGAAGTCTGTGATGACAATAGCTTTCCAGTTTGCATTTGAAATTCACCTCCAAGAAAATGTGGCCGCCATGGCTCGGCAGTATGTGCGCAGTATCATAGCATCAGTGCAGAGGGTGGCACTGGCACTCTCCCCGTCTCATTTTGGTTCACATGCTGGGTTCCGGCCTCCACCTGGCACCCCTGAAGCACAAACACTTGCTGGTTGGATCTGTCAGAGCTATAGGTGCTATCTAGGTGGAGAACTACTAAAAACCGAAGGAAGCGAGTCCATTCTCAAATCCCTTTGGCATCACTCGGATGCAATCTTGTGCTGCTCTTTGAAGGCAATGCCAGTTTTCACATTCGCAAACCAGGCAGGCCTTGACATGCTTGAGACGACGTTAGTTGCACTTCAAGACATAACACTGGAAAAGATTTTCGATGACAACGGAAGGAAGACCCTATGCTCCGAGTTCCCGCAGATAATGCAGCAGGGTTTTATGTGTCTTCAAGGAGGAATATGCATGTCAAGCATGGGAAGGCCGATCTCGTACGAGAGAGCAGTGGCATGGAAGGTGCTGAATGAAGAAGAAACTGCTCACTGTATCTGCTTCATGTTCATCAACTGGTCATTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009933 GO:0010014 GO:0010016 GO:0010033 GO:0010065 GO:0010067 GO:0010072 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045595 GO:0045597 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048518 GO:0048522 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090421 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

835

Amino Acids

91.88

Weight (kDa)

5.9

Isoelectric Point (pI)

50.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32880
fragaria_vesca	FvH4_2g35360 FvH4_2g35360 FvH4_2g35360 FvH4_2g35360
malus_domestica	MD08G1112900.v1.1 MD15G1092200.v1.1
prunus_persica	Prupe.1G447100_v2.0.a1 Prupe.1G447100_v2.0.a1
pyrus_communis	pycom08g09360 pycom110g00010 pycom15g08570
rosa_chinensis	RchiOBHm_Chr6g0306551
rosa_laevigata	RLG00000010786
rosa_multiflora	Rmu_sc0002971.1_g000003 Rmu_sc0002971.1_g000004
rosa_roxburghii	Rroxscaffold_7G00161680
rosa_rugosa	Rorug06G0350500 Rorug06G0350500
rosa_samantha	Rh6AG462700 Rh6BG438100 Rh6CG476800 Rh6DG463500
rosa_wichuraiana	Rw6G040320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	286
Acc16I	TGCGCA	1 cut(s)	1973
Acc36I	ACCTGC	3 cut(s)	286, 1691, 1846
AccB1I	GGYRCC	2 cut(s)	784, 2060
AccBSI	CCGCTC	2 cut(s)	396, 933
AccI	GTMKAC	1 cut(s)	312
AccIII	TCCGGA	1 cut(s)	559
AclWI	GGATC	3 cut(s)	964, 1527, 2099
AcoI	YGGCCR	2 cut(s)	1870, 1947
AcsI	RAATTY	2 cut(s)	904, 1926
AcuI	CTGAAG	1 cut(s)	2088
AcvI	CACGTG	1 cut(s)	614
AcyI	GRCGYC	1 cut(s)	215
AfaI	GTAC	7 cut(s)	29, 38, 74, 825, 1017, 1804, 2417
AfiI	CCNNNNNNNGG	6 cut(s)	700, 956, 1137, 1505, 1959, 2057
AflIII	ACRYGT	1 cut(s)	714
AgsI	TTSAA	7 cut(s)	746, 1195, 1829, 1925, 2206, 2279, 2375
AhdI	GACNNNNNGTC	1 cut(s)	396
AhlI	ACTAGT	1 cut(s)	1693
AjnI	CCWGG	5 cut(s)	541, 553, 1536, 2056, 2235
AjuI	GAANNNNNNNTTGG	2 cut(s)	1729, 1761
AleI	CACNNNNGTG	1 cut(s)	602
AloI	GAACNNNNNNTCC	4 cut(s)	704, 736, 1218, 1250
Alw21I	GWGCWC	3 cut(s)	98, 1168, 1340
Alw26I	GTCTC	5 cut(s)	306, 845, 1287, 2025, 2252
AlwI	GGATC	3 cut(s)	964, 1527, 2099
AlwNI	CAGNNNCTG	1 cut(s)	1463
Ama87I	CYCGRG	2 cut(s)	792, 1500
Aor13HI	TCCGGA	1 cut(s)	559
ApoI	RAATTY	2 cut(s)	904, 1926
AspLEI	GCGC	4 cut(s)	105, 1032, 1688, 1974
AspS9I	GGNCC	8 cut(s)	532, 557, 881, 1478, 1496, 1594, 1680, 1835
AsuC2I	CCSGG	1 cut(s)	1287
AsuHPI	GGTGA	3 cut(s)	400, 1871, 1922
AvaI	CYCGRG	2 cut(s)	792, 1500
AvaII	GGWCC	6 cut(s)	532, 557, 881, 1478, 1680, 1835
AxyI	CCTNAGG	1 cut(s)	1094
BaeGI	GKGCMC	1 cut(s)	86
BaeI	ACNNNNGTAYC	2 cut(s)	967, 1000
BalI	TGGCCA	1 cut(s)	1872
BanI	GGYRCC	2 cut(s)	784, 2060
BanII	GRGCYC	2 cut(s)	98, 455
BauI	CACGAG	1 cut(s)	842
BbrPI	CACGTG	1 cut(s)	614
BbsI	GAAGAC	3 cut(s)	1073, 2327, 2363
Bbv12I	GWGCWC	3 cut(s)	98, 1168, 1340
BbvCI	CCTCAGC	1 cut(s)	1819
BccI	CCATC	8 cut(s)	7, 262, 827, 1069, 1221, 1241, 1336, 1774
BceAI	ACGGC	2 cut(s)	264, 1658
BcgI	CGANNNNNNTGC	4 cut(s)	82, 116, 1704, 1738
BciT130I	CCWGG	5 cut(s)	543, 555, 1538, 2058, 2237
BciVI	GTATCC	1 cut(s)	1777
BcnI	CCSGG	1 cut(s)	1287
BcoDI	GTCTC	5 cut(s)	306, 845, 1287, 2025, 2252
BcuI	ACTAGT	1 cut(s)	1693
BfaI	CTAG	6 cut(s)	635, 885, 1238, 1493, 1694, 2117
BfmI	CTRYAG	5 cut(s)	456, 1152, 1341, 1623, 2104
BfuAI	ACCTGC	3 cut(s)	286, 1691, 1846
BfuI	GTATCC	1 cut(s)	1777
BglI	GCCNNNNNGGC	2 cut(s)	1878, 1955
Bme1390I	CCNGG	6 cut(s)	543, 555, 1287, 1538, 2058, 2237
Bme18I	GGWCC	6 cut(s)	532, 557, 881, 1478, 1680, 1835
BmeRI	GACNNNNNGTC	1 cut(s)	396
BmeT110I	CYCGRG	2 cut(s)	792, 1500
BmgT120I	GGNCC	8 cut(s)	532, 557, 881, 1478, 1496, 1594, 1680, 1835
BmrFI	CCNGG	6 cut(s)	543, 555, 1287, 1538, 2058, 2237
BmrI	ACTGGG	2 cut(s)	522, 1785
BmuI	ACTGGG	2 cut(s)	522, 1785
BoxI	GACNNNNGTC	1 cut(s)	466
BpiI	GAAGAC	3 cut(s)	1073, 2327, 2363
BpmI	CTGGAG	1 cut(s)	1371
Bpu10I	CCTNAGC	2 cut(s)	153, 1819
BpuEI	CTTGAG	2 cut(s)	1092, 2276
BpuMI	CCSGG	1 cut(s)	1287
Bsa29I	ATCGAT	2 cut(s)	161, 987
BsaAI	YACGTR	2 cut(s)	31, 614
BsaHI	GRCGYC	1 cut(s)	215
BsaJI	CCNNGG	6 cut(s)	440, 542, 723, 1007, 1536, 1953
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	2 cut(s)	56, 86
Bsc4I	CCNNNNNNNGG	6 cut(s)	700, 956, 1137, 1505, 1959, 2057
Bse118I	RCCGGY	1 cut(s)	693
Bse1I	ACTGG	9 cut(s)	517, 604, 896, 1791, 1912, 2010, 2216, 2295, 2495
Bse21I	CCTNAGG	1 cut(s)	1094
Bse3DI	GCAATG	3 cut(s)	471, 736, 2217
BseAI	TCCGGA	1 cut(s)	559
BseBI	CCWGG	5 cut(s)	543, 555, 1538, 2058, 2237
BseCI	ATCGAT	2 cut(s)	161, 987
BseDI	CCNNGG	6 cut(s)	440, 542, 723, 1007, 1536, 1953
BseLI	CCNNNNNNNGG	6 cut(s)	700, 956, 1137, 1505, 1959, 2057
BseMI	GCAATG	3 cut(s)	471, 736, 2217
BseMII	CTCAG	5 cut(s)	317, 1076, 1085, 1133, 1833
BseNI	ACTGG	9 cut(s)	517, 604, 896, 1791, 1912, 2010, 2216, 2295, 2495
BseRI	GAGGAG	1 cut(s)	287
BseSI	GKGCMC	1 cut(s)	86
BseYI	CCCAGC	1 cut(s)	2039
BsgI	GTGCAG	2 cut(s)	920, 2012
BshNI	GGYRCC	2 cut(s)	784, 2060
BshVI	ATCGAT	2 cut(s)	161, 987
BsiHKAI	GWGCWC	3 cut(s)	98, 1168, 1340
BsiHKCI	CYCGRG	2 cut(s)	792, 1500
BsiSI	CCGG	6 cut(s)	44, 560, 694, 1286, 1878, 2047
BsiWI	CGTACG	2 cut(s)	1802, 2415
BslFI	GGGAC	3 cut(s)	529, 1464, 1693
BslI	CCNNNNNNNGG	6 cut(s)	700, 956, 1137, 1505, 1959, 2057
BsmAI	GTCTC	5 cut(s)	306, 845, 1287, 2025, 2252
BsmBI	CGTCTC	3 cut(s)	1287, 2025, 2252
BsmFI	GGGAC	3 cut(s)	529, 1464, 1693
BsmI	GAATGC	1 cut(s)	1675
BsoBI	CYCGRG	2 cut(s)	792, 1500
Bsp1286I	GDGCHC	5 cut(s)	86, 98, 455, 1168, 1340
Bsp13I	TCCGGA	1 cut(s)	559
Bsp19I	CCATGG	1 cut(s)	1953
BspCNI	CTCAG	5 cut(s)	316, 1075, 1086, 1132, 1832
BspDI	ATCGAT	2 cut(s)	161, 987
BspEI	TCCGGA	1 cut(s)	559
BspMAI	CTGCAG	4 cut(s)	460, 1156, 1345, 1627
BspMI	ACCTGC	3 cut(s)	286, 1691, 1846
BspPI	GGATC	3 cut(s)	964, 1527, 2099
BspT107I	GGYRCC	2 cut(s)	784, 2060
BsrBI	CCGCTC	2 cut(s)	396, 933
BsrDI	GCAATG	3 cut(s)	471, 736, 2217
BsrFI	RCCGGY	1 cut(s)	693
BsrI	ACTGG	9 cut(s)	517, 604, 896, 1791, 1912, 2010, 2216, 2295, 2495
BssAI	RCCGGY	1 cut(s)	693
BssECI	CCNNGG	6 cut(s)	440, 542, 723, 1007, 1536, 1953
BssNI	GRCGYC	1 cut(s)	215
BssSI	CACGAG	1 cut(s)	842
BssT1I	CCWWGG	3 cut(s)	440, 1007, 1953
Bst2BI	CACGAG	1 cut(s)	842
Bst2UI	CCWGG	5 cut(s)	543, 555, 1538, 2058, 2237
Bst4CI	ACNGT	5 cut(s)	232, 593, 1650, 1802, 2468
Bst6I	CTCTTC	1 cut(s)	1554
BstACI	GRCGYC	1 cut(s)	215
BstAPI	GCANNNNNTGC	3 cut(s)	614, 1969, 2350
BstBAI	YACGTR	2 cut(s)	31, 614
BstC8I	GCNNGC	8 cut(s)	110, 451, 890, 1034, 1152, 1623, 1870, 2242
BstDEI	CTNAG	8 cut(s)	153, 303, 1062, 1094, 1119, 1169, 1400, 1819
BstDSI	CCRYGG	2 cut(s)	723, 1953
BstENI	CCTNNNNNAGG	1 cut(s)	954
BstHHI	GCGC	4 cut(s)	105, 1032, 1688, 1974
BstMAI	GTCTC	5 cut(s)	306, 845, 1287, 2025, 2252
BstNI	CCWGG	5 cut(s)	543, 555, 1538, 2058, 2237
BstNSI	RCATGY	7 cut(s)	621, 760, 892, 1492, 2039, 2254, 2392
BstPAI	GACNNNNGTC	1 cut(s)	466
BstSCI	CCNGG	6 cut(s)	541, 553, 1285, 1536, 2056, 2235
BstSFI	CTRYAG	5 cut(s)	456, 1152, 1341, 1623, 2104
BstSLI	GKGCMC	1 cut(s)	86
BstSNI	TACGTA	1 cut(s)	31
BstV2I	GAAGAC	3 cut(s)	1073, 2327, 2363
BstX2I	RGATCY	1 cut(s)	2091
BstXI	CCANNNNNNTGG	2 cut(s)	542, 781
BstYI	RGATCY	1 cut(s)	2091
Bsu15I	ATCGAT	2 cut(s)	161, 987
Bsu36I	CCTNAGG	1 cut(s)	1094
BsuI	GTATCC	1 cut(s)	1777
BsuTUI	ATCGAT	2 cut(s)	161, 987
BtgI	CCRYGG	2 cut(s)	723, 1953
BtgZI	GCGATG	1 cut(s)	266
BtsI	GCAGTG	2 cut(s)	1338, 2433
BtsIMutI	CAGTG	9 cut(s)	510, 597, 903, 1338, 1995, 2003, 2288, 2433, 2464
BveI	ACCTGC	3 cut(s)	286, 1691, 1846
Cac8I	GCNNGC	8 cut(s)	110, 451, 890, 1034, 1152, 1623, 1870, 2242
CaiI	CAGNNNCTG	1 cut(s)	1463
CfoI	GCGC	4 cut(s)	105, 1032, 1688, 1974
Cfr10I	RCCGGY	1 cut(s)	693
Cfr13I	GGNCC	8 cut(s)	532, 557, 881, 1478, 1496, 1594, 1680, 1835
ClaI	ATCGAT	2 cut(s)	161, 987
CseI	GACGC	1 cut(s)	204
Csp6I	GTAC	7 cut(s)	28, 37, 73, 824, 1016, 1803, 2416
CviQI	GTAC	7 cut(s)	28, 37, 73, 824, 1016, 1803, 2416
DdeI	CTNAG	8 cut(s)	153, 303, 1062, 1094, 1119, 1169, 1400, 1819
DriI	GACNNNNNGTC	1 cut(s)	396
EaeI	YGGCCR	2 cut(s)	1870, 1947
Eam1104I	CTCTTC	1 cut(s)	1554
Eam1105I	GACNNNNNGTC	1 cut(s)	396
EarI	CTCTTC	1 cut(s)	1554
EciI	GGCGGA	1 cut(s)	320
Ecl136II	GAGCTC	1 cut(s)	96
Eco105I	TACGTA	1 cut(s)	31
Eco130I	CCWWGG	3 cut(s)	440, 1007, 1953
Eco147I	AGGCCT	2 cut(s)	1150, 2244
Eco24I	GRGCYC	2 cut(s)	98, 455
Eco47I	GGWCC	6 cut(s)	532, 557, 881, 1478, 1680, 1835
Eco53kI	GAGCTC	1 cut(s)	96
Eco57I	CTGAAG	1 cut(s)	2088
Eco72I	CACGTG	1 cut(s)	614
Eco81I	CCTNAGG	1 cut(s)	1094
Eco88I	CYCGRG	2 cut(s)	792, 1500
EcoICRI	GAGCTC	1 cut(s)	96
EcoNI	CCTNNNNNAGG	1 cut(s)	954
EcoO109I	RGGNCCY	2 cut(s)	1496, 1680
EcoRII	CCWGG	5 cut(s)	541, 553, 1536, 2056, 2235
EcoT14I	CCWWGG	3 cut(s)	440, 1007, 1953
EcoT22I	ATGCAT	2 cut(s)	1717, 2390
EcoT38I	GRGCYC	2 cut(s)	98, 455
ErhI	CCWWGG	3 cut(s)	440, 1007, 1953
Esp3I	CGTCTC	3 cut(s)	1287, 2025, 2252
FaqI	GGGAC	3 cut(s)	529, 1464, 1693
FauI	CCCGC	3 cut(s)	926, 1041, 2349
FauNDI	CATATG	1 cut(s)	993
FblI	GTMKAC	1 cut(s)	312
FriOI	GRGCYC	2 cut(s)	98, 455
FspBI	CTAG	6 cut(s)	635, 885, 1238, 1493, 1694, 2117
FspI	TGCGCA	1 cut(s)	1973
GlaI	GCGC	4 cut(s)	104, 1031, 1687, 1973
GsaI	CCCAGC	1 cut(s)	2043
GsuI	CTGGAG	1 cut(s)	1371
HapII	CCGG	6 cut(s)	44, 560, 694, 1286, 1878, 2047
HgaI	GACGC	1 cut(s)	204
HhaI	GCGC	4 cut(s)	105, 1032, 1688, 1974
Hin1I	GRCGYC	1 cut(s)	215
Hin6I	GCGC	4 cut(s)	103, 1030, 1686, 1972
HinP1I	GCGC	4 cut(s)	103, 1030, 1686, 1972
HincII	GTYRAC	2 cut(s)	401, 1207
HindII	GTYRAC	2 cut(s)	401, 1207
HindIII	AAGCTT	2 cut(s)	57, 260
HinfI	GANTC	9 cut(s)	380, 412, 563, 573, 648, 1043, 1404, 1772, 2150
HpaI	GTTAAC	1 cut(s)	1207
HpaII	CCGG	6 cut(s)	44, 560, 694, 1286, 1878, 2047
HphI	GGTGA	3 cut(s)	400, 1871, 1922
Hpy99I	CGWCG	3 cut(s)	220, 1679, 2266
HpyCH4III	ACNGT	5 cut(s)	232, 593, 1650, 1802, 2468
HpyCH4IV	ACGT	4 cut(s)	30, 613, 714, 2264
HpyF3I	CTNAG	8 cut(s)	153, 303, 1062, 1094, 1119, 1169, 1400, 1819
HpySE526I	ACGT	4 cut(s)	30, 613, 714, 2264
Hsp92I	GRCGYC	1 cut(s)	215
HspAI	GCGC	4 cut(s)	103, 1030, 1686, 1972
Kpn2I	TCCGGA	1 cut(s)	559
KspAI	GTTAAC	1 cut(s)	1207
LmnI	GCTCC	6 cut(s)	46, 101, 1003, 1708, 1738, 2336
MaeI	CTAG	6 cut(s)	635, 885, 1238, 1493, 1694, 2117
MaeII	ACGT	4 cut(s)	30, 613, 714, 2264
MaeIII	GTNAC	3 cut(s)	388, 1261, 1368
MbiI	CCGCTC	2 cut(s)	396, 933
MfeI	CAATTG	2 cut(s)	536, 1548
MflI	RGATCY	1 cut(s)	2091
MhlI	GDGCHC	5 cut(s)	86, 98, 455, 1168, 1340
MlsI	TGGCCA	1 cut(s)	1872
MluCI	AATT	8 cut(s)	536, 582, 904, 942, 1126, 1548, 1737, 1926
MluNI	TGGCCA	1 cut(s)	1872
MlyI	GAGTC	4 cut(s)	406, 657, 1052, 2159
MmeI	TCCRAC	3 cut(s)	165, 1813, 2069
Mox20I	TGGCCA	1 cut(s)	1872
Mph1103I	ATGCAT	2 cut(s)	1717, 2390
MroI	TCCGGA	1 cut(s)	559
MscI	TGGCCA	1 cut(s)	1872
MseI	TTAA	5 cut(s)	864, 1206, 1470, 1578, 2503
MslI	CAYNNNNRTG	3 cut(s)	602, 616, 2181
Msp20I	TGGCCA	1 cut(s)	1872
MspA1I	CMGCKG	5 cut(s)	205, 307, 1133, 1463, 1628
MspI	CCGG	6 cut(s)	44, 560, 694, 1286, 1878, 2047
MspR9I	CCNGG	6 cut(s)	543, 555, 1287, 1538, 2058, 2237
MunI	CAATTG	2 cut(s)	536, 1548
Mva1269I	GAATGC	1 cut(s)	1675
MvaI	CCWGG	5 cut(s)	543, 555, 1538, 2058, 2237
NciI	CCSGG	1 cut(s)	1287
NcoI	CCATGG	1 cut(s)	1953
NdeI	CATATG	1 cut(s)	993
NmeAIII	GCCGAG	3 cut(s)	117, 954, 1939
NmuCI	GTSAC	1 cut(s)	388
NsbI	TGCGCA	1 cut(s)	1973
NsiI	ATGCAT	2 cut(s)	1717, 2390
NspI	RCATGY	7 cut(s)	621, 760, 892, 1492, 2039, 2254, 2392
OliI	CACNNNNGTG	1 cut(s)	602
PaeI	GCATGC	1 cut(s)	892
PaeR7I	CTCGAG	2 cut(s)	792, 1500
PaqCI	CACCTGC	1 cut(s)	286
PceI	AGGCCT	2 cut(s)	1150, 2244
PcsI	WCGNNNNNNNCGW	1 cut(s)	389
PctI	GAATGC	1 cut(s)	1675
PfeI	GAWTC	5 cut(s)	380, 563, 573, 1404, 1772
Pfl23II	CGTACG	2 cut(s)	1802, 2415
PleI	GAGTC	4 cut(s)	406, 656, 1051, 2158
PmaCI	CACGTG	1 cut(s)	614
PmlI	CACGTG	1 cut(s)	614
PpsI	GAGTC	4 cut(s)	406, 656, 1051, 2158
Ppu21I	YACGTR	2 cut(s)	31, 614
PpuMI	RGGWCCY	1 cut(s)	1680
PshAI	GACNNNNGTC	1 cut(s)	466
Psp124BI	GAGCTC	1 cut(s)	98
Psp5II	RGGWCCY	1 cut(s)	1680
Psp6I	CCWGG	5 cut(s)	541, 553, 1536, 2056, 2235
PspCI	CACGTG	1 cut(s)	614
PspFI	CCCAGC	1 cut(s)	2039
PspGI	CCWGG	5 cut(s)	541, 553, 1536, 2056, 2235
PspLI	CGTACG	2 cut(s)	1802, 2415
PspPI	GGNCC	8 cut(s)	532, 557, 881, 1478, 1496, 1594, 1680, 1835
PspPPI	RGGWCCY	1 cut(s)	1680
PspXI	VCTCGAGB	1 cut(s)	1500
PstI	CTGCAG	4 cut(s)	460, 1156, 1345, 1627
PstNI	CAGNNNCTG	1 cut(s)	1463
PsuI	RGATCY	1 cut(s)	2091
PvuII	CAGCTG	3 cut(s)	307, 1463, 1628
RsaI	GTAC	7 cut(s)	29, 38, 74, 825, 1017, 1804, 2417
RsaNI	GTAC	7 cut(s)	28, 37, 73, 824, 1016, 1803, 2416
RseI	CAYNNNNRTG	3 cut(s)	602, 616, 2181
SacI	GAGCTC	1 cut(s)	98
SaqAI	TTAA	5 cut(s)	864, 1206, 1470, 1578, 2503
Sau96I	GGNCC	8 cut(s)	532, 557, 881, 1478, 1496, 1594, 1680, 1835
SbfI	CCTGCAGG	1 cut(s)	460
SchI	GAGTC	4 cut(s)	406, 657, 1052, 2159
ScrFI	CCNGG	6 cut(s)	543, 555, 1287, 1538, 2058, 2237
SdaI	CCTGCAGG	1 cut(s)	460
SduI	GDGCHC	5 cut(s)	86, 98, 455, 1168, 1340
SfcI	CTRYAG	5 cut(s)	456, 1152, 1341, 1623, 2104
Sfr274I	CTCGAG	2 cut(s)	792, 1500
SinI	GGWCC	6 cut(s)	532, 557, 881, 1478, 1680, 1835
SlaI	CTCGAG	2 cut(s)	792, 1500
SmiMI	CAYNNNNRTG	3 cut(s)	602, 616, 2181
SmlI	CTYRAG	4 cut(s)	792, 1107, 1500, 2255
SmoI	CTYRAG	4 cut(s)	792, 1107, 1500, 2255
SnaBI	TACGTA	1 cut(s)	31
SpeI	ACTAGT	1 cut(s)	1693
SphI	GCATGC	1 cut(s)	892
Sse8387I	CCTGCAGG	1 cut(s)	460
Sse9I	AATT	8 cut(s)	536, 582, 904, 942, 1126, 1548, 1737, 1926
SseBI	AGGCCT	2 cut(s)	1150, 2244
SspMI	CTAG	6 cut(s)	635, 885, 1238, 1493, 1694, 2117
SstI	GAGCTC	1 cut(s)	98
StuI	AGGCCT	2 cut(s)	1150, 2244
StyD4I	CCNGG	6 cut(s)	541, 553, 1285, 1536, 2056, 2235
StyI	CCWWGG	3 cut(s)	440, 1007, 1953
TaaI	ACNGT	5 cut(s)	232, 593, 1650, 1802, 2468
TaiI	ACGT	4 cut(s)	33, 616, 717, 2267
TasI	AATT	8 cut(s)	536, 582, 904, 942, 1126, 1548, 1737, 1926
TauI	GCSGC	3 cut(s)	108, 1082, 1952
TfiI	GAWTC	5 cut(s)	380, 563, 573, 1404, 1772
Tru1I	TTAA	5 cut(s)	864, 1206, 1470, 1578, 2503
Tru9I	TTAA	5 cut(s)	864, 1206, 1470, 1578, 2503
TscAI	CASTG	9 cut(s)	517, 604, 903, 1345, 1995, 2010, 2295, 2433, 2471
TseFI	GTSAC	1 cut(s)	388
Tsp45I	GTSAC	1 cut(s)	388
TspGWI	ACGGA	3 cut(s)	110, 1151, 2328
TspRI	CASTG	9 cut(s)	517, 604, 903, 1345, 1995, 2010, 2295, 2433, 2471
VpaK11BI	GGWCC	6 cut(s)	532, 557, 881, 1478, 1680, 1835
XagI	CCTNNNNNAGG	1 cut(s)	954
XapI	RAATTY	2 cut(s)	904, 1926
XbaI	TCTAGA	2 cut(s)	634, 1237
XceI	RCATGY	7 cut(s)	621, 760, 892, 1492, 2039, 2254, 2392
XhoI	CTCGAG	2 cut(s)	792, 1500
XmiI	GTMKAC	1 cut(s)	312
XspI	CTAG	6 cut(s)	635, 885, 1238, 1493, 1694, 2117
Zsp2I	ATGCAT	2 cut(s)	1717, 2390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.