Homeobox-leucine zipper protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32880 |
| fragaria_vesca | FvH4_2g35360 FvH4_2g35360 FvH4_2g35360 FvH4_2g35360 |
| malus_domestica | MD08G1112900.v1.1 MD15G1092200.v1.1 |
| prunus_persica | Prupe.1G447100_v2.0.a1 Prupe.1G447100_v2.0.a1 |
| pyrus_communis | pycom08g09360 pycom110g00010 pycom15g08570 |
| rosa_chinensis | RchiOBHm_Chr6g0306551 |
| rosa_laevigata | RLG00000010786 |
| rosa_multiflora | Rmu_sc0002971.1_g000003 Rmu_sc0002971.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00161680 |
| rosa_rugosa | Rorug06G0350500 Rorug06G0350500 |
| rosa_samantha | Rh6AG462700 Rh6BG438100 Rh6CG476800 Rh6DG463500 |
| rosa_wichuraiana | Rw6G040320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 686 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 144, 1064 |
| AccI | GTMKAC | 1 cut(s) | 1378 |
| AccII | CGCG | 1 cut(s) | 171 |
| AciI | CCGC | 1 cut(s) | 41 |
| AclWI | GGATC | 2 cut(s) | 534, 1106 |
| AcsI | RAATTY | 1 cut(s) | 933 |
| AcuI | CTGAAG | 2 cut(s) | 48, 1095 |
| AfaI | GTAC | 2 cut(s) | 24, 811 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 144, 966, 1064 |
| AgsI | TTSAA | 9 cut(s) | 57, 202, 593, 836, 932, 944, 1213, 1286, 1453 |
| AjnI | CCWGG | 3 cut(s) | 292, 1063, 1242 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 666, 698 |
| AluBI | AGCT | 9 cut(s) | 89, 164, 467, 482, 512, 635, 700, 1091, 1110 |
| AluI | AGCT | 9 cut(s) | 89, 164, 467, 482, 512, 635, 700, 1091, 1110 |
| Alw26I | GTCTC | 2 cut(s) | 294, 1259 |
| AlwI | GGATC | 2 cut(s) | 534, 1106 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 470 |
| Ama87I | CYCGRG | 1 cut(s) | 507 |
| AoxI | GGCC | 2 cut(s) | 155, 1249 |
| ApeKI | GCWGC | 8 cut(s) | 86, 161, 467, 470, 632, 992, 1203, 1360 |
| ApoI | RAATTY | 1 cut(s) | 933 |
| AspLEI | GCGC | 3 cut(s) | 39, 171, 173 |
| AspS9I | GGNCC | 2 cut(s) | 485, 842 |
| AsuC2I | CCSGG | 1 cut(s) | 611 |
| AsuHPI | GGTGA | 1 cut(s) | 878 |
| AvaI | CYCGRG | 1 cut(s) | 507 |
| AvaII | GGWCC | 2 cut(s) | 485, 842 |
| BanI | GGYRCC | 1 cut(s) | 686 |
| BbsI | GAAGAC | 3 cut(s) | 45, 80, 1417 |
| BbvI | GCAGC | 8 cut(s) | 98, 173, 454, 457, 644, 1004, 1190, 1372 |
| BccI | CCATC | 5 cut(s) | 228, 248, 298, 343, 760 |
| BciT130I | CCWGG | 3 cut(s) | 294, 1065, 1244 |
| BcnI | CCSGG | 1 cut(s) | 611 |
| BcoDI | GTCTC | 2 cut(s) | 294, 1259 |
| BfaI | CTAG | 3 cut(s) | 500, 1088, 1124 |
| BfmI | CTRYAG | 3 cut(s) | 159, 630, 1111 |
| BglII | AGATCT | 1 cut(s) | 1329 |
| BisI | GCNGC | 8 cut(s) | 87, 162, 468, 471, 633, 993, 1204, 1361 |
| BlsI | GCNGC | 8 cut(s) | 88, 163, 469, 472, 634, 994, 1205, 1362 |
| Bme1390I | CCNGG | 4 cut(s) | 294, 611, 1065, 1244 |
| Bme18I | GGWCC | 2 cut(s) | 485, 842 |
| BmeT110I | CYCGRG | 1 cut(s) | 507 |
| BmgT120I | GGNCC | 2 cut(s) | 485, 842 |
| BmiI | GGNNCC | 1 cut(s) | 688 |
| BmrFI | CCNGG | 4 cut(s) | 294, 611, 1065, 1244 |
| BmrI | ACTGGG | 1 cut(s) | 792 |
| BmsI | GCATC | 9 cut(s) | 377, 445, 615, 709, 727, 774, 781, 1180, 1189 |
| BmuI | ACTGGG | 1 cut(s) | 792 |
| BpiI | GAAGAC | 3 cut(s) | 45, 80, 1417 |
| BpmI | CTGGAG | 2 cut(s) | 276, 378 |
| BpuEI | CTTGAG | 2 cut(s) | 99, 1283 |
| BpuMI | CCSGG | 1 cut(s) | 611 |
| BsaI | GGTCTC | 1 cut(s) | 1259 |
| BsaJI | CCNNGG | 3 cut(s) | 14, 960, 1272 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 144, 966, 1064 |
| Bse1I | ACTGG | 6 cut(s) | 549, 798, 1017, 1223, 1302, 1502 |
| Bse3DI | GCAATG | 1 cut(s) | 352 |
| BseBI | CCWGG | 3 cut(s) | 294, 1065, 1244 |
| BseDI | CCNNGG | 3 cut(s) | 14, 960, 1272 |
| BseGI | GGATG | 4 cut(s) | 239, 676, 796, 1195 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 144, 966, 1064 |
| BseMI | GCAATG | 1 cut(s) | 352 |
| BseMII | CTCAG | 3 cut(s) | 83, 140, 1332 |
| BseNI | ACTGG | 6 cut(s) | 549, 798, 1017, 1223, 1302, 1502 |
| BsePI | GCGCGC | 1 cut(s) | 169 |
| BseXI | GCAGC | 8 cut(s) | 98, 173, 454, 457, 644, 1004, 1190, 1372 |
| BsgI | GTGCAG | 1 cut(s) | 1019 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| BshFI | GGCC | 2 cut(s) | 157, 1251 |
| BshNI | GGYRCC | 1 cut(s) | 686 |
| BsiHKCI | CYCGRG | 1 cut(s) | 507 |
| BsiSI | CCGG | 1 cut(s) | 610 |
| BslFI | GGGAC | 1 cut(s) | 626 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 144, 966, 1064 |
| BsmAI | GTCTC | 2 cut(s) | 294, 1259 |
| BsmBI | CGTCTC | 1 cut(s) | 294 |
| BsmFI | GGGAC | 1 cut(s) | 626 |
| BsmI | GAATGC | 1 cut(s) | 914 |
| BsnI | GGCC | 2 cut(s) | 157, 1251 |
| Bso31I | GGTCTC | 1 cut(s) | 1259 |
| BsoBI | CYCGRG | 1 cut(s) | 507 |
| Bsp143I | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| Bsp19I | CCATGG | 1 cut(s) | 960 |
| BspACI | CCGC | 1 cut(s) | 41 |
| BspANI | GGCC | 2 cut(s) | 157, 1251 |
| BspCNI | CTCAG | 3 cut(s) | 82, 139, 1333 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BspLI | GGNNCC | 1 cut(s) | 688 |
| BspMAI | CTGCAG | 2 cut(s) | 163, 634 |
| BspPI | GGATC | 2 cut(s) | 534, 1106 |
| BspT107I | GGYRCC | 1 cut(s) | 686 |
| BspTNI | GGTCTC | 1 cut(s) | 1259 |
| BsrDI | GCAATG | 1 cut(s) | 352 |
| BsrI | ACTGG | 6 cut(s) | 549, 798, 1017, 1223, 1302, 1502 |
| BssECI | CCNNGG | 3 cut(s) | 14, 960, 1272 |
| BssHII | GCGCGC | 1 cut(s) | 169 |
| BssMI | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| BssT1I | CCWWGG | 3 cut(s) | 14, 960, 1272 |
| Bst2UI | CCWGG | 3 cut(s) | 294, 1065, 1244 |
| Bst4CI | ACNGT | 4 cut(s) | 657, 809, 884, 1475 |
| Bst6I | CTCTTC | 1 cut(s) | 561 |
| BstC8I | GCNNGC | 6 cut(s) | 41, 159, 171, 497, 630, 1249 |
| BstDEI | CTNAG | 5 cut(s) | 69, 126, 176, 407, 1341 |
| BstDSI | CCRYGG | 1 cut(s) | 960 |
| BstF5I | GGATG | 4 cut(s) | 239, 676, 796, 1195 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstHHI | GCGC | 3 cut(s) | 39, 171, 173 |
| BstKTI | GATC | 7 cut(s) | 431, 529, 820, 860, 1101, 1332, 1356 |
| BstMAI | GTCTC | 2 cut(s) | 294, 1259 |
| BstMBI | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 170, 464, 479, 962, 1116, 1244, 1401 |
| BstNI | CCWGG | 3 cut(s) | 294, 1065, 1244 |
| BstNSI | RCATGY | 3 cut(s) | 499, 1261, 1399 |
| BstSCI | CCNGG | 4 cut(s) | 292, 609, 1063, 1242 |
| BstSFI | CTRYAG | 3 cut(s) | 159, 630, 1111 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 8 cut(s) | 98, 173, 454, 457, 644, 1004, 1190, 1372 |
| BstV2I | GAAGAC | 3 cut(s) | 45, 80, 1417 |
| BstX2I | RGATCY | 2 cut(s) | 1098, 1329 |
| BstYI | RGATCY | 2 cut(s) | 1098, 1329 |
| BsuRI | GGCC | 2 cut(s) | 157, 1251 |
| BtgI | CCRYGG | 1 cut(s) | 960 |
| BtsCI | GGATG | 4 cut(s) | 239, 676, 796, 1195 |
| BtsI | GCAGTG | 4 cut(s) | 216, 357, 1002, 1440 |
| BtsIMutI | CAGTG | 9 cut(s) | 216, 357, 542, 880, 1002, 1010, 1295, 1440, 1471 |
| Cac8I | GCNNGC | 6 cut(s) | 41, 159, 171, 497, 630, 1249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 470 |
| CfoI | GCGC | 3 cut(s) | 39, 171, 173 |
| Cfr13I | GGNCC | 2 cut(s) | 485, 842 |
| CseI | GACGC | 1 cut(s) | 945 |
| Csp6I | GTAC | 2 cut(s) | 23, 810 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1258, 1293 |
| CviQI | GTAC | 2 cut(s) | 23, 810 |
| DdeI | CTNAG | 5 cut(s) | 69, 126, 176, 407, 1341 |
| DpnI | GATC | 7 cut(s) | 430, 528, 819, 859, 1100, 1331, 1355 |
| DpnII | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| Eam1104I | CTCTTC | 1 cut(s) | 561 |
| EarI | CTCTTC | 1 cut(s) | 561 |
| Eco130I | CCWWGG | 3 cut(s) | 14, 960, 1272 |
| Eco147I | AGGCCT | 2 cut(s) | 157, 1251 |
| Eco31I | GGTCTC | 1 cut(s) | 1259 |
| Eco47I | GGWCC | 2 cut(s) | 485, 842 |
| Eco57I | CTGAAG | 2 cut(s) | 48, 1095 |
| Eco88I | CYCGRG | 1 cut(s) | 507 |
| EcoRII | CCWGG | 3 cut(s) | 292, 1063, 1242 |
| EcoT14I | CCWWGG | 3 cut(s) | 14, 960, 1272 |
| EcoT22I | ATGCAT | 1 cut(s) | 1397 |
| ErhI | CCWWGG | 3 cut(s) | 14, 960, 1272 |
| Esp3I | CGTCTC | 1 cut(s) | 294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 522, 554 |
| FaqI | GGGAC | 1 cut(s) | 626 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FblI | GTMKAC | 1 cut(s) | 1378 |
| Fnu4HI | GCNGC | 8 cut(s) | 87, 162, 468, 471, 633, 993, 1204, 1361 |
| FokI | GGATG | 4 cut(s) | 246, 683, 803, 1202 |
| Fsp4HI | GCNGC | 8 cut(s) | 87, 162, 468, 471, 633, 993, 1204, 1361 |
| FspBI | CTAG | 3 cut(s) | 500, 1088, 1124 |
| GlaI | GCGC | 3 cut(s) | 38, 170, 172 |
| GluI | GCNGC | 8 cut(s) | 87, 162, 468, 471, 633, 993, 1204, 1361 |
| GsuI | CTGGAG | 2 cut(s) | 276, 378 |
| HaeIII | GGCC | 2 cut(s) | 157, 1251 |
| HapII | CCGG | 1 cut(s) | 610 |
| HgaI | GACGC | 1 cut(s) | 945 |
| HhaI | GCGC | 3 cut(s) | 39, 171, 173 |
| Hin6I | GCGC | 3 cut(s) | 37, 169, 171 |
| HinP1I | GCGC | 3 cut(s) | 37, 169, 171 |
| HinfI | GANTC | 5 cut(s) | 50, 313, 411, 779, 1157 |
| HpaII | CCGG | 1 cut(s) | 610 |
| HphI | GGTGA | 1 cut(s) | 878 |
| Hpy166II | GTNNAC | 5 cut(s) | 23, 222, 283, 1338, 1379 |
| Hpy188I | TCNGA | 5 cut(s) | 72, 433, 733, 1107, 1189 |
| Hpy188III | TCNNGA | 7 cut(s) | 507, 776, 815, 833, 944, 1073, 1286 |
| Hpy8I | GTNNAC | 5 cut(s) | 23, 222, 283, 1338, 1379 |
| HpyAV | CCTTC | 7 cut(s) | 144, 284, 1035, 1142, 1207, 1317, 1438 |
| HpyCH4III | ACNGT | 4 cut(s) | 657, 809, 884, 1475 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 170, 464, 479, 962, 1116, 1244, 1401 |
| HpyF3I | CTNAG | 5 cut(s) | 69, 126, 176, 407, 1341 |
| HspAI | GCGC | 3 cut(s) | 37, 169, 171 |
| Kzo9I | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| LmnI | GCTCC | 2 cut(s) | 715, 745 |
| Lsp1109I | GCAGC | 8 cut(s) | 98, 173, 454, 457, 644, 1004, 1190, 1372 |
| LweI | GCATC | 9 cut(s) | 377, 445, 615, 709, 727, 774, 781, 1180, 1189 |
| MaeI | CTAG | 3 cut(s) | 500, 1088, 1124 |
| MaeIII | GTNAC | 3 cut(s) | 375, 602, 878 |
| MalI | GATC | 7 cut(s) | 430, 528, 819, 859, 1100, 1331, 1355 |
| MboI | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| MboII | GAAGA | 9 cut(s) | 45, 85, 530, 578, 932, 1339, 1422, 1469, 1472 |
| MflI | RGATCY | 2 cut(s) | 1098, 1329 |
| MluCI | AATT | 7 cut(s) | 97, 133, 744, 837, 920, 933, 1194 |
| MlyI | GAGTC | 2 cut(s) | 59, 1166 |
| MmeI | TCCRAC | 1 cut(s) | 1076 |
| Mph1103I | ATGCAT | 1 cut(s) | 1397 |
| MseI | TTAA | 3 cut(s) | 477, 585, 1510 |
| MslI | CAYNNNNRTG | 2 cut(s) | 789, 1188 |
| MspA1I | CMGCKG | 2 cut(s) | 467, 635 |
| MspI | CCGG | 1 cut(s) | 610 |
| MspR9I | CCNGG | 4 cut(s) | 294, 611, 1065, 1244 |
| Mva1269I | GAATGC | 1 cut(s) | 914 |
| MvaI | CCWGG | 3 cut(s) | 294, 1065, 1244 |
| MvnI | CGCG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 170, 464, 479, 962, 1116, 1244, 1401 |
| NciI | CCSGG | 1 cut(s) | 611 |
| NcoI | CCATGG | 1 cut(s) | 960 |
| NdeII | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| NlaIV | GGNNCC | 1 cut(s) | 688 |
| NmeAIII | GCCGAG | 1 cut(s) | 721 |
| NmuCI | GTSAC | 2 cut(s) | 602, 878 |
| NsiI | ATGCAT | 1 cut(s) | 1397 |
| NspI | RCATGY | 3 cut(s) | 499, 1261, 1399 |
| PaeI | GCATGC | 1 cut(s) | 499 |
| PaeR7I | CTCGAG | 1 cut(s) | 507 |
| PauI | GCGCGC | 1 cut(s) | 169 |
| PceI | AGGCCT | 2 cut(s) | 157, 1251 |
| PctI | GAATGC | 1 cut(s) | 914 |
| PfeI | GAWTC | 3 cut(s) | 313, 411, 779 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 144, 1064 |
| PkrI | GCNGC | 8 cut(s) | 88, 163, 469, 472, 634, 994, 1205, 1362 |
| PleI | GAGTC | 2 cut(s) | 58, 1165 |
| PpsI | GAGTC | 2 cut(s) | 58, 1165 |
| Psp6I | CCWGG | 3 cut(s) | 292, 1063, 1242 |
| PspGI | CCWGG | 3 cut(s) | 292, 1063, 1242 |
| PspN4I | GGNNCC | 1 cut(s) | 688 |
| PspPI | GGNCC | 2 cut(s) | 485, 842 |
| PstI | CTGCAG | 2 cut(s) | 163, 634 |
| PstNI | CAGNNNCTG | 1 cut(s) | 470 |
| PsuI | RGATCY | 2 cut(s) | 1098, 1329 |
| PteI | GCGCGC | 1 cut(s) | 169 |
| PvuII | CAGCTG | 2 cut(s) | 467, 635 |
| RsaI | GTAC | 2 cut(s) | 24, 811 |
| RsaNI | GTAC | 2 cut(s) | 23, 810 |
| RseI | CAYNNNNRTG | 2 cut(s) | 789, 1188 |
| SaqAI | TTAA | 3 cut(s) | 477, 585, 1510 |
| SatI | GCNGC | 8 cut(s) | 87, 162, 468, 471, 633, 993, 1204, 1361 |
| Sau3AI | GATC | 7 cut(s) | 428, 526, 817, 857, 1098, 1329, 1353 |
| Sau96I | GGNCC | 2 cut(s) | 485, 842 |
| SchI | GAGTC | 2 cut(s) | 59, 1166 |
| ScrFI | CCNGG | 4 cut(s) | 294, 611, 1065, 1244 |
| SfaNI | GCATC | 9 cut(s) | 377, 445, 615, 709, 727, 774, 781, 1180, 1189 |
| SfcI | CTRYAG | 3 cut(s) | 159, 630, 1111 |
| Sfr274I | CTCGAG | 1 cut(s) | 507 |
| SinI | GGWCC | 2 cut(s) | 485, 842 |
| SlaI | CTCGAG | 1 cut(s) | 507 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 789, 1188 |
| SmlI | CTYRAG | 3 cut(s) | 114, 507, 1262 |
| SmoI | CTYRAG | 3 cut(s) | 114, 507, 1262 |
| SphI | GCATGC | 1 cut(s) | 499 |
| Sse9I | AATT | 7 cut(s) | 97, 133, 744, 837, 920, 933, 1194 |
| SseBI | AGGCCT | 2 cut(s) | 157, 1251 |
| SsiI | CCGC | 1 cut(s) | 41 |
| SspMI | CTAG | 3 cut(s) | 500, 1088, 1124 |
| StuI | AGGCCT | 2 cut(s) | 157, 1251 |
| StyD4I | CCNGG | 4 cut(s) | 292, 609, 1063, 1242 |
| StyI | CCWWGG | 3 cut(s) | 14, 960, 1272 |
| TaaI | ACNGT | 4 cut(s) | 657, 809, 884, 1475 |
| TaqI | TCGA | 3 cut(s) | 508, 1254, 1311 |
| TaqII | GACCGA | 1 cut(s) | 859 |
| TasI | AATT | 7 cut(s) | 97, 133, 744, 837, 920, 933, 1194 |
| TfiI | GAWTC | 3 cut(s) | 313, 411, 779 |
| Tru1I | TTAA | 3 cut(s) | 477, 585, 1510 |
| Tru9I | TTAA | 3 cut(s) | 477, 585, 1510 |
| TscAI | CASTG | 9 cut(s) | 216, 357, 549, 887, 1002, 1017, 1302, 1440, 1478 |
| TseFI | GTSAC | 2 cut(s) | 602, 878 |
| TseI | GCWGC | 8 cut(s) | 86, 161, 467, 470, 632, 992, 1203, 1360 |
| Tsp45I | GTSAC | 2 cut(s) | 602, 878 |
| TspDTI | ATGAA | 7 cut(s) | 562, 579, 687, 926, 1470, 1474, 1480 |
| TspGWI | ACGGA | 1 cut(s) | 968 |
| TspRI | CASTG | 9 cut(s) | 216, 357, 549, 887, 1002, 1017, 1302, 1440, 1478 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 144, 1064 |
| VpaK11BI | GGWCC | 2 cut(s) | 485, 842 |
| XapI | RAATTY | 1 cut(s) | 933 |
| XceI | RCATGY | 3 cut(s) | 499, 1261, 1399 |
| XhoI | CTCGAG | 1 cut(s) | 507 |
| XmiI | GTMKAC | 1 cut(s) | 1378 |
| XspI | CTAG | 3 cut(s) | 500, 1088, 1124 |
| Zsp2I | ATGCAT | 1 cut(s) | 1397 |